FvH4_1g25190

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000125
Physical Location & Seq
Reverse (-)
16997957 .. 16999367
1411 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g25190.t1

Sequence Viewer

Length: 1281 bp
ATGAAGATGAGAAGGAGGAGGAGGGTGAACAGGTTGATGGAGCTGCCGTCGCATATCCTGGTGAACATCCTTTTAAGATTGCCATCTGAATCAATCTGTTGCATCCGATGCGTCGCCAAGGACTTGTTAAACACTGTTGATGACTACTCGTTTGCTAAACTCCACATGGCCGCCGCCGCCGACGGCATCAATCTCATGTCTTTTGCGGAACCCTATTCTTCTGAGACCAGTGCAGTCGTAGCATCCTTGCAACCAGTCAAATATGATGGCGCCGCCGCCATGACAACTAGAGGCAAATACGCTTTTAAAGTCTCTACCACGCCACACCGCCGTGAGTATCCGACTTACACCATTGATTTTGTTTTCCGCAACCTGTTTTGCTTCCGAAGTAAATATGATCCCGGAGTTTGTTTTCTAATCAATCCTCCTATGGGACAAGTTCTAACGCTCCCTAGGAATGATATTTCCAAAGATGCCAAGTCCCAAATATTCAACGACTGGTACGGGATGGGATTTGATCATGCTACTAACACCCTGAAGATTCTTACTGTCGCCATGATTAATGCTAGGTTCCTGGCAGCCCAGGTTCTTGTATTGGGCACAAGCTCCTGGCGACACATTGCCCCTCCTCCTTGTTCATTGTCCGGTGGTGTTAATATGTATTCCGCAAATAGTGCATGTGTAAATGGGGACATGCATTGGTTGGTTTATGGTGATTTCAGGGGACGTCAAGGAACCTGTCATATACTTTCTTTCGACTTTGAGAAAGAACAGTTTTATTGGACTCCCCACCCCATCTTACAAAGCTCCGATGATGATAGGTACATCTTCTGGCATTTGCATTTGCTTACTTTTAGAGGGTCTCTGGCCATGGTGGATACTTCTTTATCACAAGGTACCATTACAAAGATTGATATATGGGTGTTGCAAGATCATCAGTGGGCAAAACAGTACGGCATAGACATCAACAATTTTGAATTGGTTAAGGAGTTTGGATGGTTGGTAGATGTTACTTGTGGCCAATGGGAGCATGGCATATATTTCAAAAATTTTGCCAAAATCCCCACCTTCTTTTTGGATCTAAGATGTTATTCCATGAATATCGTAACATGTGGTAGTGGGGAACGGACCAGAATTTTAACTTATACTGGAAGCTTGAAATCCTTGAAGAATTTCGTTGGAGCTGAAAACCTAAAGAGTTGTGGCAATTTGATTGAAGAAGAAGCACACGGATTTCATTTATCTAAGAGGCATGTGTTGCAAGGAGTCTCAGTTAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

427

Amino Acids

48.39

Weight (kDa)

8.63

Isoelectric Point (pI)

42.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_3 PF08268 117 - 317 1.2e-19 F-box associated beta propeller domain
FBA_1 PF07734 137 - 310 2.4e-12 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 730
Acc65I GGTACC 1 cut(s) 896
AccB1I GGYRCC 2 cut(s) 269, 896
AciI CCGC 9 cut(s) 171, 174, 177, 206, 273, 276, 328, 367, 666
AclWI GGATC 2 cut(s) 392, 1086
AcoI YGGCCR 3 cut(s) 168, 867, 1018
AcsI RAATTY 3 cut(s) 1048, 1134, 1171
AcuI CTGAAG 1 cut(s) 557
AcyI GRCGYC 2 cut(s) 270, 727
AfaI GTAC 4 cut(s) 503, 824, 898, 953
AfiI CCNNNNNNNGG 1 cut(s) 431
AflIII ACRYGT 1 cut(s) 1109
AgsI TTSAA 6 cut(s) 493, 977, 1045, 1159, 1168, 1217
AjnI CCWGG 4 cut(s) 57, 573, 582, 608
AleI CACNNNNGTG 1 cut(s) 330
AluBI AGCT 6 cut(s) 43, 606, 807, 1155, 1184, 1278
AluI AGCT 6 cut(s) 43, 606, 807, 1155, 1184, 1278
Alw26I GTCTC 4 cut(s) 218, 316, 867, 1273
AlwI GGATC 2 cut(s) 392, 1086
AoxI GGCC 3 cut(s) 168, 867, 1018
ApeKI GCWGC 2 cut(s) 43, 578
ApoI RAATTY 3 cut(s) 1048, 1134, 1171
ArsI GACNNNNNNTTYG 2 cut(s) 134, 166
AseI ATTAAT 1 cut(s) 561
Asp700I GAANNNNTTC 1 cut(s) 1172
Asp718I GGTACC 1 cut(s) 896
AspA2I CCTAGG 1 cut(s) 452
AspLEI GCGC 1 cut(s) 272
AspS9I GGNCC 1 cut(s) 1128
AsuC2I CCSGG 1 cut(s) 402
AsuHPI GGTGA 3 cut(s) 37, 73, 725
AvaII GGWCC 1 cut(s) 1128
AvrII CCTAGG 1 cut(s) 452
BaeGI GKGCMC 1 cut(s) 602
BalI TGGCCA 2 cut(s) 869, 1020
BanI GGYRCC 2 cut(s) 269, 896
BbvI GCAGC 2 cut(s) 30, 590
BccI CCATC 6 cut(s) 31, 91, 260, 502, 803, 990
BceAI ACGGC 4 cut(s) 31, 199, 315, 970
BciT130I CCWGG 4 cut(s) 59, 575, 584, 610
BciVI GTATCC 2 cut(s) 348, 871
BclI TGATCA 1 cut(s) 517
BcnI CCSGG 1 cut(s) 402
BcoDI GTCTC 4 cut(s) 218, 316, 867, 1273
BfaI CTAG 3 cut(s) 288, 453, 567
BfoI RGCGCY 1 cut(s) 273
BfuI GTATCC 2 cut(s) 348, 871
BisI GCNGC 7 cut(s) 44, 171, 174, 177, 273, 276, 579
BlnI CCTAGG 1 cut(s) 452
BlsI GCNGC 7 cut(s) 45, 172, 175, 178, 274, 277, 580
Bme1390I CCNGG 5 cut(s) 59, 402, 575, 584, 610
Bme18I GGWCC 1 cut(s) 1128
BmgT120I GGNCC 1 cut(s) 1128
BmiI GGNNCC 5 cut(s) 210, 271, 572, 736, 898
BmrFI CCNGG 5 cut(s) 59, 402, 575, 584, 610
BmsI GCATC 5 cut(s) 98, 111, 195, 251, 463
BpuMI CCSGG 1 cut(s) 402
BsaBI GATNNNNATC 1 cut(s) 82
BsaHI GRCGYC 2 cut(s) 270, 727
BsaI GGTCTC 2 cut(s) 218, 867
BsaJI CCNNGG 4 cut(s) 117, 452, 582, 870
BsaWI WCCGGW 1 cut(s) 644
BsaXI ACNNNNNCTCC 3 cut(s) 32, 62, 1257
Bsc4I CCNNNNNNNGG 1 cut(s) 431
Bse1I ACTGG 4 cut(s) 228, 254, 503, 1153
Bse3DI GCAATG 1 cut(s) 618
Bse8I GATNNNNATC 1 cut(s) 82
BseBI CCWGG 4 cut(s) 59, 575, 584, 610
BseDI CCNNGG 4 cut(s) 117, 452, 582, 870
BseGI GGATG 5 cut(s) 66, 102, 242, 513, 1001
BseJI GATNNNNATC 1 cut(s) 82
BseLI CCNNNNNNNGG 1 cut(s) 431
BseMI GCAATG 1 cut(s) 618
BseMII CTCAG 1 cut(s) 213
BseNI ACTGG 4 cut(s) 228, 254, 503, 1153
BseRI GAGGAG 3 cut(s) 31, 34, 618
BseSI GKGCMC 1 cut(s) 602
BseXI GCAGC 2 cut(s) 30, 590
BsgI GTGCAG 1 cut(s) 252
BshFI GGCC 3 cut(s) 170, 869, 1020
BshNI GGYRCC 2 cut(s) 269, 896
BsiSI CCGG 2 cut(s) 402, 645
BslFI GGGAC 4 cut(s) 447, 466, 704, 738
BslI CCNNNNNNNGG 1 cut(s) 431
BsmAI GTCTC 4 cut(s) 218, 316, 867, 1273
BsmFI GGGAC 4 cut(s) 447, 466, 704, 738
BsnI GGCC 3 cut(s) 170, 869, 1020
Bso31I GGTCTC 2 cut(s) 218, 867
Bsp1286I GDGCHC 1 cut(s) 602
Bsp143I GATC 4 cut(s) 397, 517, 931, 1078
Bsp19I CCATGG 1 cut(s) 870
BspACI CCGC 9 cut(s) 171, 174, 177, 206, 273, 276, 328, 367, 666
BspANI GGCC 3 cut(s) 170, 869, 1020
BspCNI CTCAG 1 cut(s) 214
BspLI GGNNCC 5 cut(s) 210, 271, 572, 736, 898
BspPI GGATC 2 cut(s) 392, 1086
BspT107I GGYRCC 2 cut(s) 269, 896
BspTNI GGTCTC 2 cut(s) 218, 867
BsrDI GCAATG 1 cut(s) 618
BsrI ACTGG 4 cut(s) 228, 254, 503, 1153
BssECI CCNNGG 4 cut(s) 117, 452, 582, 870
BssMI GATC 4 cut(s) 397, 517, 931, 1078
BssNI GRCGYC 2 cut(s) 270, 727
BssT1I CCWWGG 3 cut(s) 117, 452, 870
Bst2UI CCWGG 4 cut(s) 59, 575, 584, 610
Bst4CI ACNGT 4 cut(s) 136, 550, 774, 951
BstACI GRCGYC 2 cut(s) 270, 727
BstAPI GCANNNNNTGC 3 cut(s) 108, 674, 1258
BstDEI CTNAG 4 cut(s) 222, 1082, 1245, 1270
BstDSI CCRYGG 1 cut(s) 870
BstF5I GGATG 5 cut(s) 66, 102, 242, 513, 1001
BstH2I RGCGCY 1 cut(s) 273
BstHHI GCGC 1 cut(s) 272
BstKTI GATC 4 cut(s) 400, 520, 934, 1081
BstMAI GTCTC 4 cut(s) 218, 316, 867, 1273
BstMBI GATC 4 cut(s) 397, 517, 931, 1078
BstMWI GCNNNNNNNGC 6 cut(s) 49, 108, 176, 239, 674, 1258
BstNI CCWGG 4 cut(s) 59, 575, 584, 610
BstNSI RCATGY 4 cut(s) 681, 697, 1113, 1256
BstSCI CCNGG 5 cut(s) 57, 400, 573, 582, 608
BstSLI GKGCMC 1 cut(s) 602
BstV1I GCAGC 2 cut(s) 30, 590
BstX2I RGATCY 1 cut(s) 1078
BstYI RGATCY 1 cut(s) 1078
BsuI GTATCC 2 cut(s) 348, 871
BsuRI GGCC 3 cut(s) 170, 869, 1020
BtgI CCRYGG 1 cut(s) 870
BtsCI GGATG 5 cut(s) 66, 102, 242, 513, 1001
BtsIMutI CAGTG 3 cut(s) 132, 235, 944
CfoI GCGC 1 cut(s) 272
Cfr13I GGNCC 1 cut(s) 1128
CseI GACGC 1 cut(s) 100
Csp6I GTAC 4 cut(s) 502, 823, 897, 952
CviQI GTAC 4 cut(s) 502, 823, 897, 952
DdeI CTNAG 4 cut(s) 222, 1082, 1245, 1270
DinI GGCGCC 1 cut(s) 271
DpnI GATC 4 cut(s) 399, 519, 933, 1080
DpnII GATC 4 cut(s) 397, 517, 931, 1078
DraI TTTAAA 1 cut(s) 307
EaeI YGGCCR 3 cut(s) 168, 867, 1018
Eco130I CCWWGG 3 cut(s) 117, 452, 870
Eco31I GGTCTC 2 cut(s) 218, 867
Eco47I GGWCC 1 cut(s) 1128
Eco57I CTGAAG 1 cut(s) 557
EcoRII CCWGG 4 cut(s) 57, 573, 582, 608
EcoT14I CCWWGG 3 cut(s) 117, 452, 870
EcoT22I ATGCAT 1 cut(s) 699
EgeI GGCGCC 1 cut(s) 271
EheI GGCGCC 1 cut(s) 271
ErhI CCWWGG 3 cut(s) 117, 452, 870
FaqI GGGAC 4 cut(s) 447, 466, 704, 738
FbaI TGATCA 1 cut(s) 517
Fnu4HI GCNGC 7 cut(s) 44, 171, 174, 177, 273, 276, 579
FokI GGATG 5 cut(s) 53, 89, 229, 520, 1008
Fsp4HI GCNGC 7 cut(s) 44, 171, 174, 177, 273, 276, 579
FspBI CTAG 3 cut(s) 288, 453, 567
GlaI GCGC 1 cut(s) 271
GluI GCNGC 7 cut(s) 44, 171, 174, 177, 273, 276, 579
HaeII RGCGCY 1 cut(s) 273
HaeIII GGCC 3 cut(s) 170, 869, 1020
HapII CCGG 2 cut(s) 402, 645
HgaI GACGC 1 cut(s) 100
HhaI GCGC 1 cut(s) 272
Hin1I GRCGYC 2 cut(s) 270, 727
Hin6I GCGC 1 cut(s) 270
HinP1I GCGC 1 cut(s) 270
HindIII AAGCTT 1 cut(s) 1153
HinfI GANTC 4 cut(s) 89, 541, 784, 1266
HpaII CCGG 2 cut(s) 402, 645
HphI GGTGA 3 cut(s) 37, 73, 725
Hpy166II GTNNAC 2 cut(s) 28, 64
Hpy188I TCNGA 6 cut(s) 88, 107, 223, 342, 386, 811
Hpy8I GTNNAC 2 cut(s) 28, 64
Hpy99I CGWCG 3 cut(s) 52, 116, 185
HpyAV CCTTC 2 cut(s) 6, 1078
HpyCH4III ACNGT 4 cut(s) 136, 550, 774, 951
HpyCH4IV ACGT 1 cut(s) 727
HpyCH4V TGCA 8 cut(s) 102, 233, 250, 677, 697, 841, 928, 1261
HpyF10VI GCNNNNNNNGC 6 cut(s) 49, 108, 176, 239, 674, 1258
HpyF3I CTNAG 4 cut(s) 222, 1082, 1245, 1270
HpySE526I ACGT 1 cut(s) 727
Hsp92I GRCGYC 2 cut(s) 270, 727
HspAI GCGC 1 cut(s) 270
KasI GGCGCC 1 cut(s) 269
KpnI GGTACC 1 cut(s) 900
Ksp22I TGATCA 1 cut(s) 517
Kzo9I GATC 4 cut(s) 397, 517, 931, 1078
LmnI GCTCC 6 cut(s) 40, 453, 611, 812, 1027, 1181
Lsp1109I GCAGC 2 cut(s) 30, 590
LweI GCATC 5 cut(s) 98, 111, 195, 251, 463
MaeI CTAG 3 cut(s) 288, 453, 567
MaeII ACGT 1 cut(s) 727
MaeIII GTNAC 2 cut(s) 1009, 1105
MalI GATC 4 cut(s) 399, 519, 933, 1080
MboI GATC 4 cut(s) 397, 517, 931, 1078
MboII GAAGA 7 cut(s) 16, 210, 550, 820, 1180, 1229, 1232
MflI RGATCY 1 cut(s) 1078
MhlI GDGCHC 1 cut(s) 602
MlsI TGGCCA 2 cut(s) 869, 1020
MluCI AATT 6 cut(s) 970, 977, 1048, 1134, 1171, 1207
MluNI TGGCCA 2 cut(s) 869, 1020
Mly113I GGCGCC 1 cut(s) 270
MlyI GAGTC 2 cut(s) 778, 1275
MmeI TCCRAC 2 cut(s) 365, 1159
MnlI CCTC 9 cut(s) 9, 12, 15, 284, 435, 636, 639, 851, 1242
Mox20I TGGCCA 2 cut(s) 869, 1020
Mph1103I ATGCAT 1 cut(s) 699
MroXI GAANNNNTTC 1 cut(s) 1172
MscI TGGCCA 2 cut(s) 869, 1020
MseI TTAA 7 cut(s) 74, 128, 306, 561, 654, 984, 1139
MslI CAYNNNNRTG 1 cut(s) 330
Msp20I TGGCCA 2 cut(s) 869, 1020
MspI CCGG 2 cut(s) 402, 645
MspR9I CCNGG 5 cut(s) 59, 402, 575, 584, 610
MvaI CCWGG 4 cut(s) 59, 575, 584, 610
MwoI GCNNNNNNNGC 6 cut(s) 49, 108, 176, 239, 674, 1258
NarI GGCGCC 1 cut(s) 270
NciI CCSGG 1 cut(s) 402
NcoI CCATGG 1 cut(s) 870
NdeII GATC 4 cut(s) 397, 517, 931, 1078
NlaIV GGNNCC 5 cut(s) 210, 271, 572, 736, 898
NsiI ATGCAT 1 cut(s) 699
NspI RCATGY 4 cut(s) 681, 697, 1113, 1256
OliI CACNNNNGTG 1 cut(s) 330
PciI ACATGT 1 cut(s) 1109
PdmI GAANNNNTTC 1 cut(s) 1172
PfeI GAWTC 2 cut(s) 89, 541
PfoI TCCNGGA 1 cut(s) 400
PkrI GCNGC 7 cut(s) 45, 172, 175, 178, 274, 277, 580
PleI GAGTC 2 cut(s) 778, 1274
PluTI GGCGCC 1 cut(s) 273
PpsI GAGTC 2 cut(s) 778, 1274
PscI ACATGT 1 cut(s) 1109
PshBI ATTAAT 1 cut(s) 561
Psp6I CCWGG 4 cut(s) 57, 573, 582, 608
PspGI CCWGG 4 cut(s) 57, 573, 582, 608
PspN4I GGNNCC 5 cut(s) 210, 271, 572, 736, 898
PspPI GGNCC 1 cut(s) 1128
PsuI RGATCY 1 cut(s) 1078
RsaI GTAC 4 cut(s) 503, 824, 898, 953
RsaNI GTAC 4 cut(s) 502, 823, 897, 952
RseI CAYNNNNRTG 1 cut(s) 330
SaqAI TTAA 7 cut(s) 74, 128, 306, 561, 654, 984, 1139
SatI GCNGC 7 cut(s) 44, 171, 174, 177, 273, 276, 579
Sau3AI GATC 4 cut(s) 397, 517, 931, 1078
Sau96I GGNCC 1 cut(s) 1128
SchI GAGTC 2 cut(s) 778, 1275
ScrFI CCNGG 5 cut(s) 59, 402, 575, 584, 610
SduI GDGCHC 1 cut(s) 602
SfaNI GCATC 5 cut(s) 98, 111, 195, 251, 463
SfoI GGCGCC 1 cut(s) 271
SinI GGWCC 1 cut(s) 1128
SmiMI CAYNNNNRTG 1 cut(s) 330
Sse9I AATT 6 cut(s) 970, 977, 1048, 1134, 1171, 1207
SsiI CCGC 9 cut(s) 171, 174, 177, 206, 273, 276, 328, 367, 666
SspDI GGCGCC 1 cut(s) 269
SspI AATATT 1 cut(s) 489
SspMI CTAG 3 cut(s) 288, 453, 567
StyD4I CCNGG 5 cut(s) 57, 400, 573, 582, 608
StyI CCWWGG 3 cut(s) 117, 452, 870
TaaI ACNGT 4 cut(s) 136, 550, 774, 951
TaiI ACGT 1 cut(s) 730
TaqI TCGA 1 cut(s) 756
TasI AATT 6 cut(s) 970, 977, 1048, 1134, 1171, 1207
TauI GCSGC 5 cut(s) 173, 176, 179, 275, 278
TfiI GAWTC 2 cut(s) 89, 541
Tru1I TTAA 7 cut(s) 74, 128, 306, 561, 654, 984, 1139
Tru9I TTAA 7 cut(s) 74, 128, 306, 561, 654, 984, 1139
TscAI CASTG 3 cut(s) 139, 235, 944
TseI GCWGC 2 cut(s) 43, 578
TspDTI ATGAA 4 cut(s) 17, 627, 1112, 1226
TspGWI ACGGA 2 cut(s) 1141, 1245
TspRI CASTG 3 cut(s) 139, 235, 944
VpaK11BI GGWCC 1 cut(s) 1128
VspI ATTAAT 1 cut(s) 561
XapI RAATTY 3 cut(s) 1048, 1134, 1171
XceI RCATGY 4 cut(s) 681, 697, 1113, 1256
XcmI CCANNNNNNNNNTGG 2 cut(s) 1028, 1072
XmaJI CCTAGG 1 cut(s) 452
XmnI GAANNNNTTC 1 cut(s) 1172
XspI CTAG 3 cut(s) 288, 453, 567
ZraI GACGTC 1 cut(s) 728
Zsp2I ATGCAT 1 cut(s) 699
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.