Rroxscaffold_2G00154120

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000125
Physical Location & Seq
Reverse (-)
90818658 .. 90819911
1254 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00154120.1

Sequence Viewer

Length: 1254 bp
ATGAGGAGGCGGGATAAGGCAAAGATGAGGTTGATGGACTTACCGGTGGAAATCCTGTGTGACATTTTTAAGAGACTTCCTGTAAACTCCGTCTGCTGCCTCCGATGCGTCTCTAAAACCTTGTTGGACATAGTCCAGTCTCCCTTTTTCGTTTCACTGCATTCTCGTGTATCGATTCTCAGCAACGCTGCTGCTGATCAACATCCTCGCCTTACGCTGCGTTTTGTGGGAGAAGATTGGAACGAATGTTTTTTGACAAATAAAACGCCGTCAAAGGCCTTAGAGTGCCTGAATTACGATGGCAGCAAAGGTAACCTTATTGTCTCGGAGATTTTGTCCACCTCCGACAACGCCCGTTATCATGTATATTTTTCTTACTGCAACCTCTTTTGCTTCACTAGAAACTATGACGATTGCTTCTTGATCGATCCTTTTACCAGAGAAGTTCTAAGGCTCCCGACGAGTAGCATTCAATATACAAAGTATGGTACTCCTGACACCTATATCCCCCAGGAGGTTTACGGCATGGGATTTGATAGTGTAACTAGCACCCACAAGATTCTTCGCTTGTCCGAAATTGTTAGTCTAAAAAATCACTTTGATCACGGCCGTGTAGCCCAAATTCATGAATTGGGCACAAACTCATGGCGAGAGATACCACCATATGCTCATGATTTACGTTCTCACGGGAGCATATGTGCTTATGGAGATATGCATTGGTTGACTATAGGTGGCAGGGGAAGACAAATCATCGTTTCTTTTGATTTCACGAAAGAAGAATTCTATTGGACCCCCACTTTGGAGTTACCAAGCTTGAACAGTATGTACACAAACTTGATTGCTTTAAGAGGATCTATGGCTATAGTTATAGTCGACACTGCATGTGTGAACATCGATATATGGGTGATGAAAGATTATCATAAAAAAGAGTGGGTGCGAGATTACACCATAAATATGCATGAATCAGCTCTTGATTTTGGATTCATGTTTGCTTCTTGTGTTGAATGGGAAAATGGTATATTTTTCGAAGATACACGAAGCGAAAAGTCATTCTTTGTGGACTTCAGATGCAATTCTATGGAAGTTATAAAACGTCCAATTAGGCATGAGGGCGGCTGGAATTGTTGGCAAATCTCGAGTGTTAATAGGAGCTTGCTTTCCCTGAAAAATTATGGAAATTTGGTTGAAGCAAGACCAGGTAGTCAAACCTTGCTTGATTTCTCTAAGAATTACTTATGGCAGCACCCTGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

417

Amino Acids

48.37

Weight (kDa)

6.54

Isoelectric Point (pI)

44.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 11 - 50 4.3e-08 F-box domain
F-box-like PF12937 13 - 48 1.3e-06 F-box-like
FBA_3 PF08268 114 - 353 3.1e-23 F-box associated beta propeller domain
FBA_1 PF07734 126 - 354 1.1e-17 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1088
AasI GACNNNNNNGTC 1 cut(s) 1200
AccI GTMKAC 1 cut(s) 873
AciI CCGC 2 cut(s) 10, 1113
AclWI GGATC 2 cut(s) 422, 859
AcoI YGGCCR 1 cut(s) 607
AcsI RAATTY 3 cut(s) 621, 779, 1177
AcuI CTGAAG 1 cut(s) 1048
AfaI GTAC 2 cut(s) 490, 827
AfiI CCNNNNNNNGG 2 cut(s) 514, 799
AgeI ACCGGT 1 cut(s) 43
AgsI TTSAA 4 cut(s) 473, 817, 1004, 1187
AjnI CCWGG 2 cut(s) 510, 1195
AleI CACNNNNGTG 1 cut(s) 609
AluBI AGCT 3 cut(s) 813, 968, 1152
AluI AGCT 3 cut(s) 813, 968, 1152
Alw26I GTCTC 4 cut(s) 67, 115, 144, 328
AlwI GGATC 2 cut(s) 422, 859
Ama87I CYCGRG 1 cut(s) 1135
AoxI GGCC 2 cut(s) 276, 607
ApeKI GCWGC 6 cut(s) 96, 188, 191, 217, 303, 1240
ApoI RAATTY 3 cut(s) 621, 779, 1177
ArsI GACNNNNNNTTYG 2 cut(s) 781, 813
AsiGI ACCGGT 1 cut(s) 43
AspS9I GGNCC 1 cut(s) 789
AsuHPI GGTGA 1 cut(s) 916
AsuII TTCGAA 1 cut(s) 1026
AvaI CYCGRG 1 cut(s) 1135
AvaII GGWCC 1 cut(s) 789
BaeGI GKGCMC 1 cut(s) 638
BauI CACGAG 1 cut(s) 165
BbsI GAAGAC 1 cut(s) 748
BbvI GCAGC 5 cut(s) 83, 175, 178, 204, 315
BccI CCATC 2 cut(s) 28, 293
BceAI ACGGC 4 cut(s) 253, 538, 594, 622
BciT130I CCWGG 2 cut(s) 512, 1197
BclI TGATCA 2 cut(s) 196, 601
BcoDI GTCTC 4 cut(s) 67, 115, 144, 328
BfaI CTAG 2 cut(s) 399, 546
BfmI CTRYAG 2 cut(s) 726, 861
BisI GCNGC 7 cut(s) 97, 189, 192, 218, 304, 1114, 1241
BlsI GCNGC 7 cut(s) 98, 190, 193, 219, 305, 1115, 1242
Bme1390I CCNGG 2 cut(s) 512, 1197
Bme18I GGWCC 1 cut(s) 789
BmeT110I CYCGRG 1 cut(s) 1135
BmgT120I GGNCC 1 cut(s) 789
BmiI GGNNCC 2 cut(s) 455, 791
BmrFI CCNGG 2 cut(s) 512, 1197
BmsI GCATC 2 cut(s) 95, 1058
BpiI GAAGAC 1 cut(s) 748
Bpu14I TTCGAA 1 cut(s) 1026
Bsa29I ATCGAT 3 cut(s) 173, 426, 894
BsaBI GATNNNNATC 1 cut(s) 201
BsaJI CCNNGG 1 cut(s) 510
BsaWI WCCGGW 1 cut(s) 43
BsaXI ACNNNNNCTCC 4 cut(s) 320, 350, 682, 712
Bsc4I CCNNNNNNNGG 2 cut(s) 514, 799
Bse118I RCCGGY 1 cut(s) 43
Bse1I ACTGG 1 cut(s) 136
Bse8I GATNNNNATC 1 cut(s) 201
BseBI CCWGG 2 cut(s) 512, 1197
BseCI ATCGAT 3 cut(s) 173, 426, 894
BseDI CCNNGG 1 cut(s) 510
BseGI GGATG 1 cut(s) 202
BseJI GATNNNNATC 1 cut(s) 201
BseLI CCNNNNNNNGG 2 cut(s) 514, 799
BseMII CTCAG 1 cut(s) 193
BseNI ACTGG 1 cut(s) 136
BseRI GAGGAG 1 cut(s) 19
BseSI GKGCMC 1 cut(s) 638
BseX3I CGGCCG 1 cut(s) 607
BseXI GCAGC 5 cut(s) 83, 175, 178, 204, 315
Bsh1285I CGRYCG 1 cut(s) 610
BshFI GGCC 2 cut(s) 278, 609
BshTI ACCGGT 1 cut(s) 43
BshVI ATCGAT 3 cut(s) 173, 426, 894
BsiEI CGRYCG 1 cut(s) 610
BsiHKCI CYCGRG 1 cut(s) 1135
BsiSI CCGG 1 cut(s) 44
BslI CCNNNNNNNGG 2 cut(s) 514, 799
BsmAI GTCTC 4 cut(s) 67, 115, 144, 328
BsmBI CGTCTC 1 cut(s) 115
BsmI GAATGC 2 cut(s) 160, 468
BsnI GGCC 2 cut(s) 278, 609
BsoBI CYCGRG 1 cut(s) 1135
Bsp119I TTCGAA 1 cut(s) 1026
Bsp1286I GDGCHC 1 cut(s) 638
Bsp1407I TGTACA 1 cut(s) 825
Bsp143I GATC 5 cut(s) 196, 423, 427, 601, 851
BspACI CCGC 2 cut(s) 10, 1113
BspANI GGCC 2 cut(s) 278, 609
BspCNI CTCAG 1 cut(s) 192
BspDI ATCGAT 3 cut(s) 173, 426, 894
BspHI TCATGA 2 cut(s) 625, 670
BspLI GGNNCC 2 cut(s) 455, 791
BspPI GGATC 2 cut(s) 422, 859
BspT104I TTCGAA 1 cut(s) 1026
BsrFI RCCGGY 1 cut(s) 43
BsrGI TGTACA 1 cut(s) 825
BsrI ACTGG 1 cut(s) 136
BssAI RCCGGY 1 cut(s) 43
BssECI CCNNGG 1 cut(s) 510
BssMI GATC 5 cut(s) 196, 423, 427, 601, 851
BssSI CACGAG 1 cut(s) 165
Bst2BI CACGAG 1 cut(s) 165
Bst2UI CCWGG 2 cut(s) 512, 1197
Bst4CI ACNGT 1 cut(s) 821
BstAUI TGTACA 1 cut(s) 825
BstBI TTCGAA 1 cut(s) 1026
BstC8I GCNNGC 1 cut(s) 1154
BstDEI CTNAG 4 cut(s) 179, 280, 449, 1224
BstEII GGTNACC 1 cut(s) 311
BstF5I GGATG 1 cut(s) 202
BstKTI GATC 5 cut(s) 199, 426, 430, 604, 854
BstMAI GTCTC 4 cut(s) 67, 115, 144, 328
BstMBI GATC 5 cut(s) 196, 423, 427, 601, 851
BstMCI CGRYCG 1 cut(s) 610
BstMWI GCNNNNNNNGC 1 cut(s) 105
BstNI CCWGG 2 cut(s) 512, 1197
BstNSI RCATGY 1 cut(s) 885
BstPI GGTNACC 1 cut(s) 311
BstSCI CCNGG 2 cut(s) 510, 1195
BstSFI CTRYAG 2 cut(s) 726, 861
BstSLI GKGCMC 1 cut(s) 638
BstV1I GCAGC 5 cut(s) 83, 175, 178, 204, 315
BstV2I GAAGAC 1 cut(s) 748
BstX2I RGATCY 1 cut(s) 851
BstYI RGATCY 1 cut(s) 851
BstZI CGGCCG 1 cut(s) 607
Bsu15I ATCGAT 3 cut(s) 173, 426, 894
BsuRI GGCC 2 cut(s) 278, 609
BsuTUI ATCGAT 3 cut(s) 173, 426, 894
BtsCI GGATG 1 cut(s) 202
BtsI GCAGTG 2 cut(s) 155, 876
BtsIMutI CAGTG 2 cut(s) 155, 876
Cac8I GCNNGC 1 cut(s) 1154
CciI TCATGA 2 cut(s) 625, 670
Cfr10I RCCGGY 1 cut(s) 43
Cfr13I GGNCC 1 cut(s) 789
ClaI ATCGAT 3 cut(s) 173, 426, 894
CseI GACGC 1 cut(s) 97
CsiI ACCWGGT 1 cut(s) 1195
Csp6I GTAC 2 cut(s) 489, 826
CspAI ACCGGT 1 cut(s) 43
CviAII CATG 9 cut(s) 362, 526, 626, 645, 671, 882, 959, 985, 1106
CviJI RGCY 9 cut(s) 278, 454, 609, 617, 813, 860, 968, 1116, 1152
CviKI_1 RGCY 9 cut(s) 278, 454, 609, 617, 813, 860, 968, 1116, 1152
CviQI GTAC 2 cut(s) 489, 826
DdeI CTNAG 4 cut(s) 179, 280, 449, 1224
DpnI GATC 5 cut(s) 198, 425, 429, 603, 853
DpnII GATC 5 cut(s) 196, 423, 427, 601, 851
DrdI GACNNNNNNGTC 1 cut(s) 1200
DseDI GACNNNNNNGTC 1 cut(s) 1200
EaeI YGGCCR 1 cut(s) 607
EagI CGGCCG 1 cut(s) 607
EclXI CGGCCG 1 cut(s) 607
Eco147I AGGCCT 1 cut(s) 278
Eco47I GGWCC 1 cut(s) 789
Eco52I CGGCCG 1 cut(s) 607
Eco57I CTGAAG 1 cut(s) 1048
Eco88I CYCGRG 1 cut(s) 1135
Eco91I GGTNACC 1 cut(s) 311
EcoO65I GGTNACC 1 cut(s) 311
EcoRI GAATTC 1 cut(s) 779
EcoRII CCWGG 2 cut(s) 510, 1195
EcoT22I ATGCAT 2 cut(s) 717, 960
Esp3I CGTCTC 1 cut(s) 115
FaeI CATG 9 cut(s) 365, 529, 629, 648, 674, 885, 962, 988, 1109
FalI AAGNNNNNCTT 6 cut(s) 300, 332, 1037, 1069, 1217, 1249
FatI CATG 9 cut(s) 361, 525, 625, 644, 670, 881, 958, 984, 1105
FauI CCCGC 1 cut(s) 3
FauNDI CATATG 2 cut(s) 664, 695
FbaI TGATCA 2 cut(s) 196, 601
FblI GTMKAC 1 cut(s) 873
Fnu4HI GCNGC 7 cut(s) 97, 189, 192, 218, 304, 1114, 1241
FokI GGATG 1 cut(s) 189
Fsp4HI GCNGC 7 cut(s) 97, 189, 192, 218, 304, 1114, 1241
FspBI CTAG 2 cut(s) 399, 546
GluI GCNGC 7 cut(s) 97, 189, 192, 218, 304, 1114, 1241
HaeIII GGCC 2 cut(s) 278, 609
HapII CCGG 1 cut(s) 44
HgaI GACGC 1 cut(s) 97
Hin1II CATG 9 cut(s) 365, 529, 629, 648, 674, 885, 962, 988, 1109
HincII GTYRAC 2 cut(s) 723, 874
HindII GTYRAC 2 cut(s) 723, 874
HindIII AAGCTT 1 cut(s) 811
HinfI GANTC 4 cut(s) 175, 559, 962, 981
HpaII CCGG 1 cut(s) 44
HphI GGTGA 1 cut(s) 916
Hpy166II GTNNAC 8 cut(s) 85, 339, 520, 723, 828, 874, 889, 1060
Hpy188I TCNGA 5 cut(s) 104, 328, 346, 574, 1067
Hpy188III TCNNGA 8 cut(s) 421, 457, 494, 626, 671, 769, 971, 1135
Hpy8I GTNNAC 8 cut(s) 85, 339, 520, 723, 828, 874, 889, 1060
Hpy99I CGWCG 1 cut(s) 463
HpyCH4III ACNGT 1 cut(s) 821
HpyCH4IV ACGT 2 cut(s) 679, 1093
HpyCH4V TGCA 6 cut(s) 160, 381, 715, 881, 958, 1071
HpyF10VI GCNNNNNNNGC 1 cut(s) 105
HpyF3I CTNAG 4 cut(s) 179, 280, 449, 1224
HpySE526I ACGT 2 cut(s) 679, 1093
Hsp92II CATG 9 cut(s) 365, 529, 629, 648, 674, 885, 962, 988, 1109
Ksp22I TGATCA 2 cut(s) 196, 601
Kzo9I GATC 5 cut(s) 196, 423, 427, 601, 851
LmnI GCTCC 3 cut(s) 459, 690, 1149
Lsp1109I GCAGC 5 cut(s) 83, 175, 178, 204, 315
LweI GCATC 2 cut(s) 95, 1058
MabI ACCWGGT 1 cut(s) 1195
MaeI CTAG 2 cut(s) 399, 546
MaeII ACGT 2 cut(s) 679, 1093
MaeIII GTNAC 4 cut(s) 59, 311, 541, 804
MalI GATC 5 cut(s) 198, 425, 429, 603, 853
MboI GATC 5 cut(s) 196, 423, 427, 601, 851
MboII GAAGA 5 cut(s) 245, 554, 753, 788, 1040
MflI RGATCY 1 cut(s) 851
MhlI GDGCHC 1 cut(s) 638
MmeI TCCRAC 2 cut(s) 105, 369
MnlI CCTC 8 cut(s) 21, 110, 216, 352, 395, 508, 842, 1102
Mph1103I ATGCAT 2 cut(s) 717, 960
MseI TTAA 3 cut(s) 69, 845, 1143
MslI CAYNNNNRTG 3 cut(s) 165, 609, 953
MspI CCGG 1 cut(s) 44
MspR9I CCNGG 2 cut(s) 512, 1197
Mva1269I GAATGC 2 cut(s) 160, 468
MvaI CCWGG 2 cut(s) 512, 1197
MwoI GCNNNNNNNGC 1 cut(s) 105
NdeI CATATG 2 cut(s) 664, 695
NdeII GATC 5 cut(s) 196, 423, 427, 601, 851
NlaIII CATG 9 cut(s) 365, 529, 629, 648, 674, 885, 962, 988, 1109
NlaIV GGNNCC 2 cut(s) 455, 791
NmuCI GTSAC 1 cut(s) 59
NsiI ATGCAT 2 cut(s) 717, 960
NspI RCATGY 1 cut(s) 885
NspV TTCGAA 1 cut(s) 1026
OliI CACNNNNGTG 1 cut(s) 609
PaeR7I CTCGAG 1 cut(s) 1135
PagI TCATGA 2 cut(s) 625, 670
PceI AGGCCT 1 cut(s) 278
PctI GAATGC 2 cut(s) 160, 468
PfeI GAWTC 4 cut(s) 175, 559, 962, 981
PflFI GACNNNGTC 1 cut(s) 131
PinAI ACCGGT 1 cut(s) 43
PkrI GCNGC 7 cut(s) 98, 190, 193, 219, 305, 1115, 1242
PsiI TTATAA 1 cut(s) 1088
Psp6I CCWGG 2 cut(s) 510, 1195
PspEI GGTNACC 1 cut(s) 311
PspGI CCWGG 2 cut(s) 510, 1195
PspN4I GGNNCC 2 cut(s) 455, 791
PspPI GGNCC 1 cut(s) 789
PsrI GAACNNNNNNTAC 2 cut(s) 809, 841
PsuI RGATCY 1 cut(s) 851
PsyI GACNNNGTC 1 cut(s) 131
RsaI GTAC 2 cut(s) 490, 827
RsaNI GTAC 2 cut(s) 489, 826
RseI CAYNNNNRTG 3 cut(s) 165, 609, 953
SalI GTCGAC 1 cut(s) 872
SaqAI TTAA 3 cut(s) 69, 845, 1143
SatI GCNGC 7 cut(s) 97, 189, 192, 218, 304, 1114, 1241
Sau3AI GATC 5 cut(s) 196, 423, 427, 601, 851
Sau96I GGNCC 1 cut(s) 789
ScrFI CCNGG 2 cut(s) 512, 1197
SduI GDGCHC 1 cut(s) 638
SexAI ACCWGGT 1 cut(s) 1195
SfaNI GCATC 2 cut(s) 95, 1058
SfcI CTRYAG 2 cut(s) 726, 861
Sfr274I CTCGAG 1 cut(s) 1135
SfuI TTCGAA 1 cut(s) 1026
SinI GGWCC 1 cut(s) 789
SlaI CTCGAG 1 cut(s) 1135
SmiMI CAYNNNNRTG 3 cut(s) 165, 609, 953
SmlI CTYRAG 1 cut(s) 1135
SmoI CTYRAG 1 cut(s) 1135
SseBI AGGCCT 1 cut(s) 278
SsiI CCGC 2 cut(s) 10, 1113
SspMI CTAG 2 cut(s) 399, 546
StuI AGGCCT 1 cut(s) 278
StyD4I CCNGG 2 cut(s) 510, 1195
TaaI ACNGT 1 cut(s) 821
TaiI ACGT 2 cut(s) 682, 1096
TaqI TCGA 6 cut(s) 173, 426, 873, 894, 1026, 1136
TatI WGTACW 1 cut(s) 825
TauI GCSGC 1 cut(s) 1116
TfiI GAWTC 4 cut(s) 175, 559, 962, 981
Tru1I TTAA 3 cut(s) 69, 845, 1143
Tru9I TTAA 3 cut(s) 69, 845, 1143
TscAI CASTG 2 cut(s) 162, 883
TseFI GTSAC 1 cut(s) 59
TseI GCWGC 6 cut(s) 96, 188, 191, 217, 303, 1240
Tsp45I GTSAC 1 cut(s) 59
TspDTI ATGAA 5 cut(s) 614, 642, 923, 973, 975
TspGWI ACGGA 1 cut(s) 79
TspRI CASTG 2 cut(s) 162, 883
Tth111I GACNNNGTC 1 cut(s) 131
VpaK11BI GGWCC 1 cut(s) 789
XapI RAATTY 3 cut(s) 621, 779, 1177
XceI RCATGY 1 cut(s) 885
XhoI CTCGAG 1 cut(s) 1135
XmiI GTMKAC 1 cut(s) 873
XspI CTAG 2 cut(s) 399, 546
Zsp2I ATGCAT 2 cut(s) 717, 960
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.