FvH4_5g31171

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000125
Physical Location & Seq
Forward (+)
22095381 .. 22097048
1668 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g31171.t1

Sequence Viewer

Length: 1500 bp
ATGGCCGGAGGAATCCTCATGCATAGAAGCAATTTTTTGAAAAGATGTATCGATCTTCTGAAGACTTTGAGTAATATTTGGATGGTGAGAAACACATTGACGGAATTAGACGAAGATGTCACCGGCGGCGAGACTGATGGCGATCCAAACACAAGGGTAACAACATTGACAAACCTACCGGAAGATGTCACCAGCGATATCCTTATGAGACTGCCGGTAGAATCACTCTGTCGCGTCCAATGTGTGTCTAAGACCTCTTTGGACATATCTCGCAGCCCCGACTTTGCTACACTGCACAACCTGCAGGCTGCTACGGACGCATCGCCTATGCGTGTTACTACATGGTGTAGTGGTACGTCAGTGTTGCAAGCATGGCAGTCGTTCAAATACAACAGCATAAAGCAAACACTGACAAAATCGGTACATGTCTTTCAAATTGGCTCGAAACAATATGACTTCGAAGTAGACTTCGTTTTCTGCAACTTGGTTTTCCTTAAAACATTAATAAGACATGGTTCTGATGGTTTTGGTCCATGCTTGTTGGTCAATCCGCTGAGGGAAGAAGTTCTAGAGCTACCTCTTAGTAACATCCCAGTTCCAACCACCAATACTGATTCAGGGGATGATACTGATTGGTACGGGATGGGATATGATAATATTACTAGCACATACAAGATTGTTCATGTTCGGGCTACTAACAACTGTGCTGTGGCTCAAGTTTTTGTAGTAGGTACAAGCTCATGGCGACAGATACCTTTGGCTCCTCCTTTTGATGAAAGCACTTCTTTTTCAGGCAAGCGCAGCAACAATGCAATATATGTAGGTGGGCACATGCATTGGTTGGTTTACAGAAAAATAGAAAGCCTTGGTTACATGATTTCTTTCAATTTTAACAGAGAGGAATTTTGTGCGACTCTTGTTCCCTCCTCTAATTATGGGACTTATGGCGGCTTACATTTGCTTGAATTTAGAGGATCTTTGGCCCTTGTGGATGTTCATCGTCCGGATGTATATTATAATATCAAGATATGGGTGTTGAAAAGTTATGACGATGAGAAAAAATGGGAGCTACATCACAATATAACAATGAAATGCCTCCTTCCAATATGGACTAGTTTTCCAGCATGGTCTACTTTTAGAGAGTTTTGTGCTGAATGGGAGCATGGAATATGTTTGGCATCAGAAGATCAATGTTACTTTTTGGACCTAAGAAATCTTTCGATGAAAATAGAACAACTCCCCCCATATTCTACTCCTGGTTATTTGCCATCCATCTTTTGGACAGGAAAATGTAGGGACTCCAATATCTTCAGCTATACTGAAAGCCTAATTTCACTGAAAAATTATGGCAGGTTACAGAAGCAAGGCAAGGTGTATAGCACTAGGATTCAAGCACTCACTGAGTTTCTTTATGATGTCGTATCACCAGGCTTGTTTCAATATATACTTGCTGAGTTTGTCAAATGGGATAAAATTTTCGGACAAATTAATGCAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_3

Protein Analysis

500

Amino Acids

56.91

Weight (kDa)

6.08

Isoelectric Point (pI)

40.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 56 - 95 9.8e-07 F-box domain
FBA_3 PF08268 125 - 359 2.4e-17 F-box associated beta propeller domain
FBA_1 PF07734 205 - 368 1.4e-14 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1017
AasI GACNNNNNNGTC 1 cut(s) 116
Acc36I ACCTGC 2 cut(s) 309, 1341
AccB7I CCANNNNNTGG 1 cut(s) 1278
AccI GTMKAC 2 cut(s) 465, 1130
AccII CGCG 1 cut(s) 234
AccIII TCCGGA 1 cut(s) 1003
AciI CCGC 3 cut(s) 126, 551, 948
AclWI GGATC 2 cut(s) 137, 982
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 3 cut(s) 902, 965, 1473
AcuI CTGAAG 2 cut(s) 80, 1294
AfaI GTAC 4 cut(s) 355, 423, 638, 733
AfiI CCNNNNNNNGG 1 cut(s) 1278
AflIII ACRYGT 1 cut(s) 424
AgsI TTSAA 8 cut(s) 40, 385, 434, 886, 965, 1039, 1391, 1439
AhlI ACTAGT 1 cut(s) 1112
AjnI CCWGG 2 cut(s) 1255, 1426
AluBI AGCT 4 cut(s) 574, 738, 1069, 1314
AluI AGCT 4 cut(s) 574, 738, 1069, 1314
Alw26I GTCTC 2 cut(s) 125, 202
AlwI GGATC 2 cut(s) 137, 982
Aor13HI TCCGGA 1 cut(s) 1003
AoxI GGCC 2 cut(s) 3, 981
ApeKI GCWGC 3 cut(s) 273, 308, 801
ApoI RAATTY 3 cut(s) 902, 965, 1473
AseI ATTAAT 2 cut(s) 503, 1488
Asp700I GAANNNNTTC 2 cut(s) 564, 1216
AspLEI GCGC 1 cut(s) 801
AspS9I GGNCC 3 cut(s) 530, 982, 1204
AsuHPI GGTGA 4 cut(s) 97, 112, 181, 1416
AsuII TTCGAA 1 cut(s) 459
AvaII GGWCC 2 cut(s) 530, 1204
BaeGI GKGCMC 1 cut(s) 831
BaeI ACNNNNGTAYC 2 cut(s) 345, 378
BbsI GAAGAC 1 cut(s) 68
BbvCI CCTCAGC 1 cut(s) 554
BbvI GCAGC 3 cut(s) 285, 295, 813
BccI CCATC 6 cut(s) 76, 131, 515, 637, 1276, 1280
BcgI CGANNNNNNTGC 2 cut(s) 360, 394
BciT130I CCWGG 2 cut(s) 1257, 1428
BcoDI GTCTC 2 cut(s) 125, 202
BcuI ACTAGT 1 cut(s) 1112
BfaI CTAG 4 cut(s) 569, 663, 1113, 1383
BfmI CTRYAG 1 cut(s) 302
BfuAI ACCTGC 2 cut(s) 309, 1341
BisI GCNGC 5 cut(s) 127, 274, 309, 802, 949
BlsI GCNGC 5 cut(s) 128, 275, 310, 803, 950
Bme1390I CCNGG 2 cut(s) 1257, 1428
Bme18I GGWCC 2 cut(s) 530, 1204
BmgT120I GGNCC 3 cut(s) 530, 982, 1204
BmiI GGNNCC 1 cut(s) 762
BmrFI CCNGG 2 cut(s) 1257, 1428
BmrI ACTGGG 1 cut(s) 587
BmsI GCATC 2 cut(s) 329, 1187
BmuI ACTGGG 1 cut(s) 587
BpiI GAAGAC 1 cut(s) 68
BplI GAGNNNNNCTC 1 cut(s) 32
Bpu10I CCTNAGC 1 cut(s) 554
Bpu14I TTCGAA 1 cut(s) 459
BpuEI CTTGAG 1 cut(s) 699
Bsa29I ATCGAT 1 cut(s) 51
BsaBI GATNNNNATC 2 cut(s) 141, 996
BsaJI CCNNGG 1 cut(s) 865
BsaWI WCCGGW 2 cut(s) 178, 1003
Bsc4I CCNNNNNNNGG 1 cut(s) 1278
Bse118I RCCGGY 2 cut(s) 122, 214
Bse1I ACTGG 1 cut(s) 593
Bse8I GATNNNNATC 2 cut(s) 141, 996
BseAI TCCGGA 1 cut(s) 1003
BseBI CCWGG 2 cut(s) 1257, 1428
BseCI ATCGAT 1 cut(s) 51
BseDI CCNNGG 1 cut(s) 865
BseGI GGATG 7 cut(s) 87, 588, 628, 648, 997, 1012, 1268
BseJI GATNNNNATC 2 cut(s) 141, 996
BseLI CCNNNNNNNGG 1 cut(s) 1278
BseMII CTCAG 3 cut(s) 545, 1392, 1443
BseNI ACTGG 1 cut(s) 593
BseRI GAGGAG 2 cut(s) 753, 916
BseSI GKGCMC 1 cut(s) 831
BseXI GCAGC 3 cut(s) 285, 295, 813
BsgI GTGCAG 1 cut(s) 278
Bsh1236I CGCG 1 cut(s) 234
BshFI GGCC 2 cut(s) 5, 983
BshVI ATCGAT 1 cut(s) 51
BsiSI CCGG 5 cut(s) 6, 123, 179, 215, 1004
BslFI GGGAC 2 cut(s) 952, 1310
BslI CCNNNNNNNGG 1 cut(s) 1278
BsmAI GTCTC 2 cut(s) 125, 202
BsmFI GGGAC 2 cut(s) 952, 1310
BsnI GGCC 2 cut(s) 5, 983
Bsp119I TTCGAA 1 cut(s) 459
Bsp1286I GDGCHC 1 cut(s) 831
Bsp13I TCCGGA 1 cut(s) 1003
Bsp143I GATC 4 cut(s) 52, 142, 974, 1186
BspACI CCGC 3 cut(s) 126, 551, 948
BspANI GGCC 2 cut(s) 5, 983
BspCNI CTCAG 3 cut(s) 546, 1393, 1444
BspDI ATCGAT 1 cut(s) 51
BspEI TCCGGA 1 cut(s) 1003
BspFNI CGCG 1 cut(s) 234
BspLI GGNNCC 1 cut(s) 762
BspMAI CTGCAG 1 cut(s) 306
BspMI ACCTGC 2 cut(s) 309, 1341
BspPI GGATC 2 cut(s) 137, 982
BspT104I TTCGAA 1 cut(s) 459
BsrFI RCCGGY 2 cut(s) 122, 214
BsrI ACTGG 1 cut(s) 593
BssAI RCCGGY 2 cut(s) 122, 214
BssECI CCNNGG 1 cut(s) 865
BssMI GATC 4 cut(s) 52, 142, 974, 1186
BssT1I CCWWGG 1 cut(s) 865
Bst2UI CCWGG 2 cut(s) 1257, 1428
Bst4CI ACNGT 1 cut(s) 704
BstAPI GCANNNNNTGC 1 cut(s) 301
BstBI TTCGAA 1 cut(s) 459
BstC8I GCNNGC 3 cut(s) 306, 369, 797
BstDEI CTNAG 6 cut(s) 249, 554, 581, 1208, 1401, 1452
BstF5I GGATG 7 cut(s) 87, 588, 628, 648, 997, 1012, 1268
BstFNI CGCG 1 cut(s) 234
BstHHI GCGC 1 cut(s) 801
BstKTI GATC 4 cut(s) 55, 145, 977, 1189
BstMAI GTCTC 2 cut(s) 125, 202
BstMBI GATC 4 cut(s) 52, 142, 974, 1186
BstMWI GCNNNNNNNGC 4 cut(s) 301, 317, 373, 801
BstNI CCWGG 2 cut(s) 1257, 1428
BstNSI RCATGY 2 cut(s) 428, 835
BstSCI CCNGG 2 cut(s) 1255, 1426
BstSFI CTRYAG 1 cut(s) 302
BstSLI GKGCMC 1 cut(s) 831
BstUI CGCG 1 cut(s) 234
BstV1I GCAGC 3 cut(s) 285, 295, 813
BstV2I GAAGAC 1 cut(s) 68
BstX2I RGATCY 1 cut(s) 974
BstYI RGATCY 1 cut(s) 974
Bsu15I ATCGAT 1 cut(s) 51
BsuRI GGCC 2 cut(s) 5, 983
BsuTUI ATCGAT 1 cut(s) 51
BtgZI GCGATG 1 cut(s) 306
BtsCI GGATG 7 cut(s) 87, 588, 628, 648, 997, 1012, 1268
BtsI GCAGTG 1 cut(s) 290
BtsIMutI CAGTG 5 cut(s) 290, 366, 407, 1334, 1398
BveI ACCTGC 2 cut(s) 309, 1341
Cac8I GCNNGC 3 cut(s) 306, 369, 797
CfoI GCGC 1 cut(s) 801
Cfr10I RCCGGY 2 cut(s) 122, 214
Cfr13I GGNCC 3 cut(s) 530, 982, 1204
ClaI ATCGAT 1 cut(s) 51
CseI GACGC 2 cut(s) 223, 326
Csp6I GTAC 4 cut(s) 354, 422, 637, 732
CviQI GTAC 4 cut(s) 354, 422, 637, 732
DdeI CTNAG 6 cut(s) 249, 554, 581, 1208, 1401, 1452
DpnI GATC 4 cut(s) 54, 144, 976, 1188
DpnII GATC 4 cut(s) 52, 142, 974, 1186
DrdI GACNNNNNNGTC 1 cut(s) 116
DseDI GACNNNNNNGTC 1 cut(s) 116
EaeI YGGCCR 1 cut(s) 3
Eco130I CCWWGG 1 cut(s) 865
Eco32I GATATC 1 cut(s) 199
Eco47I GGWCC 2 cut(s) 530, 1204
Eco57I CTGAAG 2 cut(s) 80, 1294
EcoRII CCWGG 2 cut(s) 1255, 1426
EcoRV GATATC 1 cut(s) 199
EcoT14I CCWWGG 1 cut(s) 865
EcoT22I ATGCAT 2 cut(s) 24, 837
ErhI CCWWGG 1 cut(s) 865
FalI AAGNNNNNCTT 2 cut(s) 769, 801
FaqI GGGAC 2 cut(s) 952, 1310
FblI GTMKAC 2 cut(s) 465, 1130
Fnu4HI GCNGC 5 cut(s) 127, 274, 309, 802, 949
FokI GGATG 7 cut(s) 94, 575, 635, 655, 1004, 1019, 1255
Fsp4HI GCNGC 5 cut(s) 127, 274, 309, 802, 949
FspBI CTAG 4 cut(s) 569, 663, 1113, 1383
GlaI GCGC 1 cut(s) 800
GluI GCNGC 5 cut(s) 127, 274, 309, 802, 949
HaeIII GGCC 2 cut(s) 5, 983
HapII CCGG 5 cut(s) 6, 123, 179, 215, 1004
HgaI GACGC 2 cut(s) 223, 326
HhaI GCGC 1 cut(s) 801
Hin6I GCGC 1 cut(s) 799
HinP1I GCGC 1 cut(s) 799
HinfI GANTC 6 cut(s) 12, 221, 614, 913, 1298, 1387
HpaII CCGG 5 cut(s) 6, 123, 179, 215, 1004
HphI GGTGA 4 cut(s) 97, 112, 181, 1416
Hpy166II GTNNAC 3 cut(s) 466, 847, 1131
Hpy188I TCNGA 4 cut(s) 60, 520, 1183, 1481
Hpy188III TCNNGA 3 cut(s) 569, 1004, 1024
Hpy8I GTNNAC 3 cut(s) 466, 847, 1131
HpyAV CCTTC 1 cut(s) 1109
HpyCH4III ACNGT 1 cut(s) 704
HpyCH4IV ACGT 1 cut(s) 356
HpyCH4V TGCA 8 cut(s) 22, 295, 304, 367, 480, 812, 835, 1493
HpyF10VI GCNNNNNNNGC 4 cut(s) 301, 317, 373, 801
HpyF3I CTNAG 6 cut(s) 249, 554, 581, 1208, 1401, 1452
HpySE526I ACGT 1 cut(s) 356
HspAI GCGC 1 cut(s) 799
Kpn2I TCCGGA 1 cut(s) 1003
Kzo9I GATC 4 cut(s) 52, 142, 974, 1186
LmnI GCTCC 3 cut(s) 766, 1066, 1159
Lsp1109I GCAGC 3 cut(s) 285, 295, 813
LweI GCATC 2 cut(s) 329, 1187
MaeI CTAG 4 cut(s) 569, 663, 1113, 1383
MaeII ACGT 1 cut(s) 356
MaeIII GTNAC 8 cut(s) 118, 157, 187, 334, 584, 869, 1193, 1353
MalI GATC 4 cut(s) 54, 144, 976, 1188
MboI GATC 4 cut(s) 52, 142, 974, 1186
MboII GAAGA 7 cut(s) 47, 73, 125, 194, 572, 1196, 1300
MflI RGATCY 1 cut(s) 974
MhlI GDGCHC 1 cut(s) 831
MlyI GAGTC 2 cut(s) 907, 1292
MmeI TCCRAC 1 cut(s) 623
Mph1103I ATGCAT 2 cut(s) 24, 837
MroI TCCGGA 1 cut(s) 1003
MroXI GAANNNNTTC 2 cut(s) 564, 1216
MseI TTAA 4 cut(s) 495, 503, 891, 1488
MspA1I CMGCKG 1 cut(s) 553
MspI CCGG 5 cut(s) 6, 123, 179, 215, 1004
MspR9I CCNGG 2 cut(s) 1257, 1428
MvaI CCWGG 2 cut(s) 1257, 1428
MvnI CGCG 1 cut(s) 234
MwoI GCNNNNNNNGC 4 cut(s) 301, 317, 373, 801
NdeII GATC 4 cut(s) 52, 142, 974, 1186
NlaIV GGNNCC 1 cut(s) 762
NmuCI GTSAC 2 cut(s) 118, 187
NsiI ATGCAT 2 cut(s) 24, 837
NspI RCATGY 2 cut(s) 428, 835
NspV TTCGAA 1 cut(s) 459
PciI ACATGT 1 cut(s) 424
PdmI GAANNNNTTC 2 cut(s) 564, 1216
PfeI GAWTC 4 cut(s) 12, 221, 614, 1387
PflMI CCANNNNNTGG 1 cut(s) 1278
PkrI GCNGC 5 cut(s) 128, 275, 310, 803, 950
PleI GAGTC 2 cut(s) 907, 1292
PpsI GAGTC 2 cut(s) 907, 1292
PscI ACATGT 1 cut(s) 424
PshBI ATTAAT 2 cut(s) 503, 1488
PsiI TTATAA 1 cut(s) 1017
Psp6I CCWGG 2 cut(s) 1255, 1426
PspGI CCWGG 2 cut(s) 1255, 1426
PspN4I GGNNCC 1 cut(s) 762
PspPI GGNCC 3 cut(s) 530, 982, 1204
PstI CTGCAG 1 cut(s) 306
PsuI RGATCY 1 cut(s) 974
RsaI GTAC 4 cut(s) 355, 423, 638, 733
RsaNI GTAC 4 cut(s) 354, 422, 637, 732
SaqAI TTAA 4 cut(s) 495, 503, 891, 1488
SatI GCNGC 5 cut(s) 127, 274, 309, 802, 949
Sau3AI GATC 4 cut(s) 52, 142, 974, 1186
Sau96I GGNCC 3 cut(s) 530, 982, 1204
SbfI CCTGCAGG 1 cut(s) 306
SchI GAGTC 2 cut(s) 907, 1292
ScrFI CCNGG 2 cut(s) 1257, 1428
SdaI CCTGCAGG 1 cut(s) 306
SduI GDGCHC 1 cut(s) 831
SfaNI GCATC 2 cut(s) 329, 1187
SfcI CTRYAG 1 cut(s) 302
SfuI TTCGAA 1 cut(s) 459
SgrAI CRCCGGYG 1 cut(s) 122
SinI GGWCC 2 cut(s) 530, 1204
SmlI CTYRAG 1 cut(s) 714
SmoI CTYRAG 1 cut(s) 714
SpeI ACTAGT 1 cut(s) 1112
Sse8387I CCTGCAGG 1 cut(s) 306
SsiI CCGC 3 cut(s) 126, 551, 948
SspI AATATT 2 cut(s) 76, 658
SspMI CTAG 4 cut(s) 569, 663, 1113, 1383
StyD4I CCNGG 2 cut(s) 1255, 1426
StyI CCWWGG 1 cut(s) 865
TaaI ACNGT 1 cut(s) 704
TaiI ACGT 1 cut(s) 359
TaqI TCGA 4 cut(s) 51, 443, 459, 1220
TauI GCSGC 2 cut(s) 129, 951
TfiI GAWTC 4 cut(s) 12, 221, 614, 1387
Tru1I TTAA 4 cut(s) 495, 503, 891, 1488
Tru9I TTAA 4 cut(s) 495, 503, 891, 1488
TscAI CASTG 5 cut(s) 297, 366, 414, 1341, 1405
TseFI GTSAC 2 cut(s) 118, 187
TseI GCWGC 3 cut(s) 273, 308, 801
Tsp45I GTSAC 2 cut(s) 118, 187
TspDTI ATGAA 5 cut(s) 671, 789, 986, 1103, 1238
TspGWI ACGGA 2 cut(s) 116, 329
TspRI CASTG 5 cut(s) 297, 366, 414, 1341, 1405
Van91I CCANNNNNTGG 1 cut(s) 1278
VpaK11BI GGWCC 2 cut(s) 530, 1204
VspI ATTAAT 2 cut(s) 503, 1488
XapI RAATTY 3 cut(s) 902, 965, 1473
XbaI TCTAGA 1 cut(s) 568
XceI RCATGY 2 cut(s) 428, 835
XcmI CCANNNNNNNNNTGG 1 cut(s) 1275
XmiI GTMKAC 2 cut(s) 465, 1130
XmnI GAANNNNTTC 2 cut(s) 564, 1216
XspI CTAG 4 cut(s) 569, 663, 1113, 1383
Zsp2I ATGCAT 2 cut(s) 24, 837
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.