FvH4_6g03511

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000125
Physical Location & Seq
Reverse (-)
1928424 .. 1930264
1841 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g03511.t1

Sequence Viewer

Length: 1173 bp
ATGAGTGATAAAATTGTGATTTTCTATGACAGAAAGGGCAAATGCATGGTGAGGTGCAACGAAATCCGGAGGCAGCTGATGGATCTACCCACGGATTTGCTGGTGGACATCCTTTTGAGGCTGCCGGTAGAATCGTTGCGTTATTGCATCCGACGTGTGTGCAAGACCTTGTTAAACACGGTTGACAGCCGCTCTTTCATTAGGCAACACACACTTTCACTCATTGCAGGCAACAACCATGTTGTTTGTCGAGTACCTCAACTTATGTGCCTTTTAGAAGAAACTCCTCTCGATGAAGAAGAGATAATCATTACTACTTTTGTGACCTTGCAATCACTGAGATATGATGGTGGCACCGCCTTGACAAAAGGCGAATTCACATTTACTCATTCGACATCAAGCCCTTATCAGCCAAGGTACATGATACATTTTGTTTTCTACAACTTGTTATGCATGGAGGCAGATGAACATTGCTTGTTGATCAATCCTCTTCTCAAACAAGTTCTAACTCTCCCAACCGATAACATTCGACAACTTGATATGACAAAATATGGTCCGAATTGTCATGTATCCCTTCGGTTCTATGGTATGGGATTTGATGATATAACCAACACCTACAAAATTGTTCGCGTTTCCAGGATTTGGCATAAGGAAGATTATCTTGAGACCCTCGGCATGTTAGCTCATATTCTTGTGTTGGGCACCAACTCCTGGAGAGAAATACCATCGGTCCCTCCCTGTATGGGATTAATTTACACGTATAATCTTTGTGCATACGGAGATATGCATTGGCTGATGTTAAGAGGAAGAGATGGAGGTGTCCGTATACTTTCTTTTGACTTCAAAAGAGAAGAGTTTCATTGGACTCCTGCTCCCACATTGCGAAGCTCGAACAAGAACTCCATCTTGCACATGCTTAGTTTAAGAGGATCCATGGCCATTGTGGAGACGTTCCCATTGGGAGAAGGAGCTATCAAGGTTGAGATATGGGTGATGAAAGATTATACAAAGAAAGAGTGGGCGAGGGAATACAGCATGAATGTCGACGTGCGTCCTAAGTATGGGTTGAAGTATGCGACTTGTGGTGAATGGGAGCATGGCATATTTTTCAATGATCATAACATGATGTGTTTCAAGTCTGAGGGTACTACTAGATTGTTTTTGGATCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

391

Amino Acids

45.44

Weight (kDa)

7.56

Isoelectric Point (pI)

47.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_3 PF08268 138 - 343 2.4e-21 F-box associated beta propeller domain
FBA_1 PF07734 149 - 380 1.3e-17 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 353, 701
AccB7I CCANNNNNTGG 2 cut(s) 642, 711
AccBSI CCGCTC 1 cut(s) 192
AccI GTMKAC 2 cut(s) 826, 1044
AccII CGCG 1 cut(s) 630
AccIII TCCGGA 1 cut(s) 66
AciI CCGC 2 cut(s) 190, 357
AclWI GGATC 3 cut(s) 90, 924, 937
AcoI YGGCCR 1 cut(s) 936
AcsI RAATTY 1 cut(s) 374
AfaI GTAC 3 cut(s) 255, 419, 1147
AfiI CCNNNNNNNGG 4 cut(s) 642, 711, 743, 1061
AflIII ACRYGT 2 cut(s) 154, 756
AgsI TTSAA 4 cut(s) 844, 1069, 1111, 1135
AjiI CACGTC 2 cut(s) 155, 1048
AjnI CCWGG 2 cut(s) 635, 710
AloI GAACNNNNNNTCC 2 cut(s) 884, 916
AluBI AGCT 4 cut(s) 76, 683, 888, 971
AluI AGCT 4 cut(s) 76, 683, 888, 971
Alw26I GTCTC 2 cut(s) 659, 941
AlwI GGATC 3 cut(s) 90, 924, 937
Aor13HI TCCGGA 1 cut(s) 66
AoxI GGCC 1 cut(s) 936
ApeKI GCWGC 2 cut(s) 73, 121
ApoI RAATTY 1 cut(s) 374
AseI ATTAAT 1 cut(s) 749
Asp700I GAANNNNTTC 1 cut(s) 855
AspS9I GGNCC 2 cut(s) 554, 730
AsuHPI GGTGA 3 cut(s) 61, 1003, 1097
AvaII GGWCC 2 cut(s) 554, 730
BaeGI GKGCMC 1 cut(s) 704
BalI TGGCCA 1 cut(s) 938
BamHI GGATCC 1 cut(s) 929
BanI GGYRCC 2 cut(s) 353, 701
BbvI GCAGC 2 cut(s) 85, 108
BccI CCATC 5 cut(s) 73, 341, 733, 806, 911
BcgI CGANNNNNNTGC 4 cut(s) 141, 175, 1024, 1058
BciT130I CCWGG 2 cut(s) 637, 712
BciVI GTATCC 1 cut(s) 580
BclI TGATCA 2 cut(s) 480, 1114
BcoDI GTCTC 2 cut(s) 659, 941
BfaI CTAG 1 cut(s) 1152
BfuI GTATCC 1 cut(s) 580
BisI GCNGC 3 cut(s) 74, 122, 190
BlsI GCNGC 3 cut(s) 75, 123, 191
Bme1390I CCNGG 2 cut(s) 637, 712
Bme18I GGWCC 2 cut(s) 554, 730
BmgBI CACGTC 2 cut(s) 155, 1048
BmgT120I GGNCC 2 cut(s) 554, 730
BmiI GGNNCC 4 cut(s) 355, 703, 732, 931
BmrFI CCNGG 2 cut(s) 637, 712
BmsI GCATC 1 cut(s) 156
BoxI GACNNNNGTC 1 cut(s) 1050
BpmI CTGGAG 1 cut(s) 733
BpuEI CTTGAG 1 cut(s) 683
BsaAI YACGTR 1 cut(s) 759
BsaI GGTCTC 1 cut(s) 659
BsaJI CCNNGG 4 cut(s) 90, 413, 670, 933
BsaWI WCCGGW 1 cut(s) 66
BsaXI ACNNNNNCTCC 4 cut(s) 856, 884, 886, 914
Bsc4I CCNNNNNNNGG 4 cut(s) 642, 711, 743, 1061
Bse118I RCCGGY 1 cut(s) 124
Bse3DI GCAATG 3 cut(s) 222, 469, 878
BseAI TCCGGA 1 cut(s) 66
BseBI CCWGG 2 cut(s) 637, 712
BseDI CCNNGG 4 cut(s) 90, 413, 670, 933
BseGI GGATG 2 cut(s) 108, 147
BseLI CCNNNNNNNGG 4 cut(s) 642, 711, 743, 1061
BseMI GCAATG 3 cut(s) 222, 469, 878
BseMII CTCAG 2 cut(s) 329, 1131
BseRI GAGGAG 1 cut(s) 276
BseSI GKGCMC 1 cut(s) 704
BseXI GCAGC 2 cut(s) 85, 108
Bsh1236I CGCG 1 cut(s) 630
BshFI GGCC 1 cut(s) 938
BshNI GGYRCC 2 cut(s) 353, 701
BsiSI CCGG 2 cut(s) 67, 125
BslFI GGGAC 1 cut(s) 716
BslI CCNNNNNNNGG 4 cut(s) 642, 711, 743, 1061
BsmAI GTCTC 2 cut(s) 659, 941
BsmBI CGTCTC 1 cut(s) 941
BsmFI GGGAC 1 cut(s) 716
BsnI GGCC 1 cut(s) 938
Bso31I GGTCTC 1 cut(s) 659
Bsp1286I GDGCHC 1 cut(s) 704
Bsp13I TCCGGA 1 cut(s) 66
Bsp143I GATC 5 cut(s) 82, 480, 929, 1114, 1165
Bsp19I CCATGG 1 cut(s) 933
BspACI CCGC 2 cut(s) 190, 357
BspANI GGCC 1 cut(s) 938
BspCNI CTCAG 2 cut(s) 330, 1132
BspEI TCCGGA 1 cut(s) 66
BspFNI CGCG 1 cut(s) 630
BspLI GGNNCC 4 cut(s) 355, 703, 732, 931
BspPI GGATC 3 cut(s) 90, 924, 937
BspT107I GGYRCC 2 cut(s) 353, 701
BspTNI GGTCTC 1 cut(s) 659
BsrBI CCGCTC 1 cut(s) 192
BsrDI GCAATG 3 cut(s) 222, 469, 878
BsrFI RCCGGY 1 cut(s) 124
BssAI RCCGGY 1 cut(s) 124
BssECI CCNNGG 4 cut(s) 90, 413, 670, 933
BssMI GATC 5 cut(s) 82, 480, 929, 1114, 1165
BssNAI GTATAC 1 cut(s) 827
BssT1I CCWWGG 2 cut(s) 413, 933
Bst1107I GTATAC 1 cut(s) 827
Bst2UI CCWGG 2 cut(s) 637, 712
Bst4CI ACNGT 1 cut(s) 181
Bst6I CTCTTC 4 cut(s) 294, 495, 802, 846
BstBAI YACGTR 1 cut(s) 759
BstC8I GCNNGC 1 cut(s) 229
BstDEI CTNAG 4 cut(s) 338, 917, 1056, 1140
BstDSI CCRYGG 2 cut(s) 90, 933
BstF5I GGATG 2 cut(s) 108, 147
BstFNI CGCG 1 cut(s) 630
BstKTI GATC 5 cut(s) 85, 483, 932, 1117, 1168
BstMAI GTCTC 2 cut(s) 659, 941
BstMBI GATC 5 cut(s) 82, 480, 929, 1114, 1165
BstNI CCWGG 2 cut(s) 637, 712
BstNSI RCATGY 2 cut(s) 679, 916
BstPAI GACNNNNGTC 1 cut(s) 1050
BstSCI CCNGG 2 cut(s) 635, 710
BstSLI GKGCMC 1 cut(s) 704
BstUI CGCG 1 cut(s) 630
BstV1I GCAGC 2 cut(s) 85, 108
BstX2I RGATCY 3 cut(s) 82, 929, 1165
BstYI RGATCY 3 cut(s) 82, 929, 1165
BstZ17I GTATAC 1 cut(s) 827
BsuI GTATCC 1 cut(s) 580
BsuRI GGCC 1 cut(s) 938
BtgI CCRYGG 2 cut(s) 90, 933
BtrI CACGTC 2 cut(s) 155, 1048
BtsCI GGATG 2 cut(s) 108, 147
BtsIMutI CAGTG 1 cut(s) 335
Cac8I GCNNGC 1 cut(s) 229
Cfr10I RCCGGY 1 cut(s) 124
Cfr13I GGNCC 2 cut(s) 554, 730
CseI GACGC 1 cut(s) 1040
Csp6I GTAC 3 cut(s) 254, 418, 1146
CviQI GTAC 3 cut(s) 254, 418, 1146
DdeI CTNAG 4 cut(s) 338, 917, 1056, 1140
DpnI GATC 5 cut(s) 84, 482, 931, 1116, 1167
DpnII GATC 5 cut(s) 82, 480, 929, 1114, 1165
EaeI YGGCCR 1 cut(s) 936
Eam1104I CTCTTC 4 cut(s) 294, 495, 802, 846
EarI CTCTTC 4 cut(s) 294, 495, 802, 846
Eco130I CCWWGG 2 cut(s) 413, 933
Eco31I GGTCTC 1 cut(s) 659
Eco47I GGWCC 2 cut(s) 554, 730
EcoRI GAATTC 1 cut(s) 374
EcoRII CCWGG 2 cut(s) 635, 710
EcoT14I CCWWGG 2 cut(s) 413, 933
EcoT22I ATGCAT 3 cut(s) 47, 455, 789
ErhI CCWWGG 2 cut(s) 413, 933
Esp3I CGTCTC 1 cut(s) 941
FalI AAGNNNNNCTT 2 cut(s) 645, 677
FaqI GGGAC 1 cut(s) 716
FbaI TGATCA 2 cut(s) 480, 1114
FblI GTMKAC 2 cut(s) 826, 1044
Fnu4HI GCNGC 3 cut(s) 74, 122, 190
FokI GGATG 2 cut(s) 95, 134
Fsp4HI GCNGC 3 cut(s) 74, 122, 190
FspBI CTAG 1 cut(s) 1152
GluI GCNGC 3 cut(s) 74, 122, 190
GsuI CTGGAG 1 cut(s) 733
HaeIII GGCC 1 cut(s) 938
HapII CCGG 2 cut(s) 67, 125
HgaI GACGC 1 cut(s) 1040
HincII GTYRAC 2 cut(s) 184, 1045
HindII GTYRAC 2 cut(s) 184, 1045
HinfI GANTC 2 cut(s) 131, 865
HpaII CCGG 2 cut(s) 67, 125
HphI GGTGA 3 cut(s) 61, 1003, 1097
Hpy166II GTNNAC 4 cut(s) 106, 184, 827, 1045
Hpy188I TCNGA 3 cut(s) 152, 558, 1141
Hpy188III TCNNGA 3 cut(s) 67, 290, 662
Hpy8I GTNNAC 4 cut(s) 106, 184, 827, 1045
Hpy99I CGWCG 2 cut(s) 156, 1049
HpyAV CCTTC 2 cut(s) 584, 959
HpyCH4III ACNGT 1 cut(s) 181
HpyCH4IV ACGT 4 cut(s) 154, 758, 950, 1047
HpyF3I CTNAG 4 cut(s) 338, 917, 1056, 1140
HpySE526I ACGT 4 cut(s) 154, 758, 950, 1047
Kpn2I TCCGGA 1 cut(s) 66
Ksp22I TGATCA 2 cut(s) 480, 1114
Kzo9I GATC 5 cut(s) 82, 480, 929, 1114, 1165
LmnI GCTCC 3 cut(s) 877, 968, 1093
Lsp1109I GCAGC 2 cut(s) 85, 108
LweI GCATC 1 cut(s) 156
MaeI CTAG 1 cut(s) 1152
MaeII ACGT 4 cut(s) 154, 758, 950, 1047
MaeIII GTNAC 1 cut(s) 322
MalI GATC 5 cut(s) 84, 482, 931, 1116, 1167
MbiI CCGCTC 1 cut(s) 192
MboI GATC 5 cut(s) 82, 480, 929, 1114, 1165
MboII GAAGA 7 cut(s) 290, 308, 311, 482, 665, 819, 863
MflI RGATCY 3 cut(s) 82, 929, 1165
MhlI GDGCHC 1 cut(s) 704
MlsI TGGCCA 1 cut(s) 938
MluCI AATT 5 cut(s) 12, 374, 559, 621, 750
MluNI TGGCCA 1 cut(s) 938
MlyI GAGTC 1 cut(s) 859
MmeI TCCRAC 1 cut(s) 175
Mox20I TGGCCA 1 cut(s) 938
Mph1103I ATGCAT 3 cut(s) 47, 455, 789
MroI TCCGGA 1 cut(s) 66
MroXI GAANNNNTTC 1 cut(s) 855
MscI TGGCCA 1 cut(s) 938
MseI TTAA 4 cut(s) 173, 749, 800, 923
Msp20I TGGCCA 1 cut(s) 938
MspA1I CMGCKG 1 cut(s) 76
MspI CCGG 2 cut(s) 67, 125
MspR9I CCNGG 2 cut(s) 637, 712
MvaI CCWGG 2 cut(s) 637, 712
MvnI CGCG 1 cut(s) 630
NcoI CCATGG 1 cut(s) 933
NdeII GATC 5 cut(s) 82, 480, 929, 1114, 1165
NlaIV GGNNCC 4 cut(s) 355, 703, 732, 931
NmeAIII GCCGAG 1 cut(s) 651
NmuCI GTSAC 1 cut(s) 322
NsiI ATGCAT 3 cut(s) 47, 455, 789
NspI RCATGY 2 cut(s) 679, 916
PdmI GAANNNNTTC 1 cut(s) 855
PfeI GAWTC 1 cut(s) 131
PflMI CCANNNNNTGG 2 cut(s) 642, 711
PfoI TCCNGGA 2 cut(s) 635, 710
PkrI GCNGC 3 cut(s) 75, 123, 191
PleI GAGTC 1 cut(s) 859
PpsI GAGTC 1 cut(s) 859
Ppu21I YACGTR 1 cut(s) 759
PshAI GACNNNNGTC 1 cut(s) 1050
PshBI ATTAAT 1 cut(s) 749
Psp6I CCWGG 2 cut(s) 635, 710
PspGI CCWGG 2 cut(s) 635, 710
PspN4I GGNNCC 4 cut(s) 355, 703, 732, 931
PspPI GGNCC 2 cut(s) 554, 730
PsuI RGATCY 3 cut(s) 82, 929, 1165
PvuII CAGCTG 1 cut(s) 76
RsaI GTAC 3 cut(s) 255, 419, 1147
RsaNI GTAC 3 cut(s) 254, 418, 1146
SalI GTCGAC 1 cut(s) 1043
SaqAI TTAA 4 cut(s) 173, 749, 800, 923
SatI GCNGC 3 cut(s) 74, 122, 190
Sau3AI GATC 5 cut(s) 82, 480, 929, 1114, 1165
Sau96I GGNCC 2 cut(s) 554, 730
SchI GAGTC 1 cut(s) 859
ScrFI CCNGG 2 cut(s) 637, 712
SduI GDGCHC 1 cut(s) 704
SfaNI GCATC 1 cut(s) 156
SinI GGWCC 2 cut(s) 554, 730
SmlI CTYRAG 1 cut(s) 662
SmoI CTYRAG 1 cut(s) 662
Sse9I AATT 5 cut(s) 12, 374, 559, 621, 750
SsiI CCGC 2 cut(s) 190, 357
SspMI CTAG 1 cut(s) 1152
StyD4I CCNGG 2 cut(s) 635, 710
StyI CCWWGG 2 cut(s) 413, 933
TaaI ACNGT 1 cut(s) 181
TaiI ACGT 4 cut(s) 157, 761, 953, 1050
TaqI TCGA 6 cut(s) 250, 291, 392, 529, 890, 1044
TaqII GACCGA 1 cut(s) 718
TasI AATT 5 cut(s) 12, 374, 559, 621, 750
TauI GCSGC 1 cut(s) 192
TfiI GAWTC 1 cut(s) 131
Tru1I TTAA 4 cut(s) 173, 749, 800, 923
Tru9I TTAA 4 cut(s) 173, 749, 800, 923
TscAI CASTG 1 cut(s) 342
TseFI GTSAC 1 cut(s) 322
TseI GCWGC 2 cut(s) 73, 121
Tsp45I GTSAC 1 cut(s) 322
TspDTI ATGAA 6 cut(s) 187, 309, 480, 848, 1010, 1052
TspGWI ACGGA 3 cut(s) 107, 792, 812
TspRI CASTG 1 cut(s) 342
Van91I CCANNNNNTGG 2 cut(s) 642, 711
VpaK11BI GGWCC 2 cut(s) 554, 730
VspI ATTAAT 1 cut(s) 749
XapI RAATTY 1 cut(s) 374
XceI RCATGY 2 cut(s) 679, 916
XcmI CCANNNNNNNNNTGG 2 cut(s) 97, 940
XmiI GTMKAC 2 cut(s) 826, 1044
XmnI GAANNNNTTC 1 cut(s) 855
XspI CTAG 1 cut(s) 1152
Zsp2I ATGCAT 3 cut(s) 47, 455, 789
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.