FvH4_6g09801

Transmembrane protein 87A-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000125
Physical Location & Seq
Reverse (-)
5843526 .. 5845735
2210 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g09801.t1

Sequence Viewer

Length: 1380 bp
ATGGCGTGGACGGAGGTAATGAGGAAACCCTTCAGACGCAAGAAGAAAACAAACTTGTTTGATTTACCCAGCGATATCATCATCAACATCCTTCTCAAACTGCCTCTAGAAACACTTTATCGCCTTCGCTCTGTCTCTAAGACCTTGTTGAACAGACTTGAGGATCCTCTCTTTGCCACGACGCACACTCGCCTACGTATTAGTACAAATGCTGCTGGTGAAGTTCCTCGGCTAATGCTTGTATCCAAAATTAGTAGTGAACGTATGTTGGATTACATACACATGCAGTCACTAAAATATGATGGCCAAGACTTGACAGCAGAAACCAAGATTAATGCAATTGCCTTGAAAAATTTGCCCTATTGGCCATGGCATAATCATCGTTATGACAGTCAGAAATACAGTTTAGAATTTTGTTACCACGGCTTGTTTTTCTACAAGAAAGAGTCCGAAGGACAGTCACGCTTATTGCTGTGCGATCCTCTTCGAGGAGAAATTCTAAAGCTCCCAACAATCGACTTTCCAGTTCAAAGTAAGAACGTAGGTTGTTCATATGGTATGGGATTCGATAGCAAAACCAACACCCACAAGATTGTTTGTGTCTCCTCAGATATTGAAGGCTGCAAAGAGACTCAGGTTCTTGTATTAGGAACAGACTCATGGAAAAAGATACCCTCTCAGCCTCCTTGTCATATAAGTAAGAGACATATATGTGCATACGGAGATATGCATTGGTTGATTGATCTGTTATTACAAGCAAGAGATGATAGACTGCGGATAGTTTCTTTCGACTTCAAGAAAGAGGAATTTTATTGGACTCCCCATCCTACCTCAGTATCTATGGTTGATGTTCCTTACATGCAGCTACTTAATTTCAGAGGATCTATCGCCATTGCGTGTGTTTCAATGGAGTACTATCTTAAAATATGGGTGTTACCCAATTATGATACCAAAGATTGGGGACTAGATTACTCCATAAATCTCCGAATGTTTTCAGAACCTGTGGGTTTCTCAAGACTGTCATCATATAGTCATAGTTGTGGTGAATGGGAGCATGGTATATTTTTTATAGATAAACTAAGGCAAATGTCATTCTTTGTGGATCTAAGACGTACTTCCATGAAACAAATAGCACTGCATAAGATATTCAGAGGTGGAGATCCTTGGAGGCAGCTGAACATCGTCGGCTATGCTGCAGGGAGTTTTGTTTCTTTAAAAGATTACGGCCAATTGGACTTCGATTCGATGTCACGGAGTATAGTGGAAATGCCTGTGGTGGTAATGGTGAATGTGGTGAGCCTCCAATCCAAAACACTGCAGAATGGGGAAACAAGCCACGAAGATGCACCTCTCAATTCCTCTGAATATAGAAGATGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lung_7-TM_R

Protein Analysis

460

Amino Acids

53.24

Weight (kDa)

8.82

Isoelectric Point (pI)

50.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 19 - 55 2.7e-06 F-box domain
FBA_1 PF07734 131 - 370 2.8e-14 F-box associated beta propeller domain
FBA_3 PF08268 139 - 321 2.4e-24 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 957
AciI CCGC 1 cut(s) 775
AclWI GGATC 6 cut(s) 158, 171, 473, 889, 1110, 1154
AcoI YGGCCR 3 cut(s) 304, 365, 1225
AcsI RAATTY 4 cut(s) 352, 410, 495, 806
AcuI CTGAAG 1 cut(s) 16
AfaI GTAC 3 cut(s) 205, 914, 1114
AfiI CCNNNNNNNGG 2 cut(s) 488, 957
AgsI TTSAA 6 cut(s) 151, 349, 530, 617, 796, 906
AluBI AGCT 3 cut(s) 505, 865, 1174
AluI AGCT 3 cut(s) 505, 865, 1174
Alw26I GTCTC 4 cut(s) 139, 607, 623, 697
AlwI GGATC 6 cut(s) 158, 171, 473, 889, 1110, 1154
AlwNI CAGNNNCTG 1 cut(s) 1001
AoxI GGCC 3 cut(s) 304, 365, 1225
ApeKI GCWGC 5 cut(s) 212, 621, 862, 1171, 1193
ApoI RAATTY 4 cut(s) 352, 410, 495, 806
AseI ATTAAT 1 cut(s) 333
Asp700I GAANNNNTTC 2 cut(s) 29, 991
AsuHPI GGTGA 4 cut(s) 230, 1055, 1297, 1306
BaeI ACNNNNGTAYC 2 cut(s) 819, 852
BalI TGGCCA 2 cut(s) 306, 367
BamHI GGATCC 1 cut(s) 163
BbvI GCAGC 5 cut(s) 199, 608, 874, 1180, 1183
BccI CCATC 2 cut(s) 296, 831
BceAI ACGGC 2 cut(s) 439, 1240
BcgI CGANNNNNNTGC 2 cut(s) 362, 396
BciVI GTATCC 1 cut(s) 253
BcoDI GTCTC 4 cut(s) 139, 607, 623, 697
BfaI CTAG 3 cut(s) 107, 965, 1378
BfmI CTRYAG 2 cut(s) 1194, 1316
BfuI GTATCC 1 cut(s) 253
BglI GCCNNNNNGGC 1 cut(s) 364
BisI GCNGC 5 cut(s) 213, 622, 863, 1172, 1194
BlsI GCNGC 5 cut(s) 214, 623, 864, 1173, 1195
BmcAI AGTACT 1 cut(s) 914
BmiI GGNNCC 1 cut(s) 165
BmsI GCATC 2 cut(s) 1333, 1364
BpuEI CTTGAG 2 cut(s) 179, 997
BsaAI YACGTR 1 cut(s) 197
BsaJI CCNNGG 4 cut(s) 227, 368, 421, 1163
Bsc4I CCNNNNNNNGG 2 cut(s) 488, 957
Bse1I ACTGG 1 cut(s) 524
Bse3DI GCAATG 1 cut(s) 891
BseDI CCNNGG 4 cut(s) 227, 368, 421, 1163
BseGI GGATG 2 cut(s) 87, 823
BseLI CCNNNNNNNGG 2 cut(s) 488, 957
BseMI GCAATG 1 cut(s) 891
BseMII CTCAG 4 cut(s) 621, 647, 692, 846
BseNI ACTGG 1 cut(s) 524
BseRI GAGGAG 2 cut(s) 504, 595
BseXI GCAGC 5 cut(s) 199, 608, 874, 1180, 1183
BseYI CCCAGC 1 cut(s) 68
BshFI GGCC 3 cut(s) 306, 367, 1227
BslFI GGGAC 1 cut(s) 975
BslI CCNNNNNNNGG 2 cut(s) 488, 957
BsmAI GTCTC 4 cut(s) 139, 607, 623, 697
BsmFI GGGAC 1 cut(s) 975
BsnI GGCC 3 cut(s) 306, 367, 1227
Bsp143I GATC 6 cut(s) 163, 478, 742, 881, 1102, 1159
Bsp19I CCATGG 1 cut(s) 368
BspACI CCGC 1 cut(s) 775
BspANI GGCC 3 cut(s) 306, 367, 1227
BspCNI CTCAG 4 cut(s) 620, 646, 691, 845
BspLI GGNNCC 1 cut(s) 165
BspMAI CTGCAG 2 cut(s) 1198, 1320
BspPI GGATC 6 cut(s) 158, 171, 473, 889, 1110, 1154
BsrDI GCAATG 1 cut(s) 891
BsrI ACTGG 1 cut(s) 524
BssECI CCNNGG 4 cut(s) 227, 368, 421, 1163
BssMI GATC 6 cut(s) 163, 478, 742, 881, 1102, 1159
BssT1I CCWWGG 2 cut(s) 368, 1163
Bst4CI ACNGT 4 cut(s) 392, 404, 459, 1020
Bst6I CTCTTC 1 cut(s) 489
BstBAI YACGTR 1 cut(s) 197
BstDEI CTNAG 7 cut(s) 138, 607, 633, 678, 832, 1079, 1106
BstDSI CCRYGG 2 cut(s) 368, 421
BstENI CCTNNNNNAGG 1 cut(s) 486
BstF5I GGATG 2 cut(s) 87, 823
BstKTI GATC 6 cut(s) 166, 481, 745, 884, 1105, 1162
BstMAI GTCTC 4 cut(s) 139, 607, 623, 697
BstMBI GATC 6 cut(s) 163, 478, 742, 881, 1102, 1159
BstMWI GCNNNNNNNGC 1 cut(s) 364
BstNSI RCATGY 2 cut(s) 286, 862
BstSFI CTRYAG 2 cut(s) 1194, 1316
BstSNI TACGTA 1 cut(s) 197
BstV1I GCAGC 5 cut(s) 199, 608, 874, 1180, 1183
BstX2I RGATCY 4 cut(s) 163, 881, 1102, 1159
BstYI RGATCY 4 cut(s) 163, 881, 1102, 1159
BsuI GTATCC 1 cut(s) 253
BsuRI GGCC 3 cut(s) 306, 367, 1227
BtgI CCRYGG 2 cut(s) 368, 421
BtsCI GGATG 2 cut(s) 87, 823
BtsI GCAGTG 2 cut(s) 1133, 1313
BtsIMutI CAGTG 2 cut(s) 1133, 1313
CaiI CAGNNNCTG 1 cut(s) 1001
CseI GACGC 2 cut(s) 45, 190
Csp6I GTAC 3 cut(s) 204, 913, 1113
CviAII CATG 6 cut(s) 283, 369, 660, 859, 1055, 1120
CviQI GTAC 3 cut(s) 204, 913, 1113
DdeI CTNAG 7 cut(s) 138, 607, 633, 678, 832, 1079, 1106
DpnI GATC 6 cut(s) 165, 480, 744, 883, 1104, 1161
DpnII GATC 6 cut(s) 163, 478, 742, 881, 1102, 1159
DraI TTTAAA 1 cut(s) 1215
EaeI YGGCCR 3 cut(s) 304, 365, 1225
Eam1104I CTCTTC 1 cut(s) 489
EarI CTCTTC 1 cut(s) 489
Eco105I TACGTA 1 cut(s) 197
Eco130I CCWWGG 2 cut(s) 368, 1163
Eco32I GATATC 1 cut(s) 76
Eco57I CTGAAG 1 cut(s) 16
EcoNI CCTNNNNNAGG 1 cut(s) 486
EcoRV GATATC 1 cut(s) 76
EcoT14I CCWWGG 2 cut(s) 368, 1163
EcoT22I ATGCAT 1 cut(s) 732
ErhI CCWWGG 2 cut(s) 368, 1163
FaeI CATG 6 cut(s) 286, 372, 663, 862, 1058, 1123
FalI AAGNNNNNCTT 2 cut(s) 1099, 1131
FaqI GGGAC 1 cut(s) 975
FatI CATG 6 cut(s) 282, 368, 659, 858, 1054, 1119
FauNDI CATATG 1 cut(s) 553
Fnu4HI GCNGC 5 cut(s) 213, 622, 863, 1172, 1194
FokI GGATG 2 cut(s) 74, 810
Fsp4HI GCNGC 5 cut(s) 213, 622, 863, 1172, 1194
FspBI CTAG 3 cut(s) 107, 965, 1378
GluI GCNGC 5 cut(s) 213, 622, 863, 1172, 1194
GsaI CCCAGC 1 cut(s) 72
HaeIII GGCC 3 cut(s) 306, 367, 1227
HgaI GACGC 2 cut(s) 45, 190
Hin1II CATG 6 cut(s) 286, 372, 663, 862, 1058, 1123
HinfI GANTC 6 cut(s) 446, 564, 631, 656, 817, 1241
HphI GGTGA 4 cut(s) 230, 1055, 1297, 1306
Hpy166II GTNNAC 2 cut(s) 9, 260
Hpy188I TCNGA 9 cut(s) 35, 396, 451, 610, 878, 986, 997, 1151, 1363
Hpy188III TCNNGA 3 cut(s) 107, 796, 1014
Hpy8I GTNNAC 2 cut(s) 9, 260
Hpy99I CGWCG 2 cut(s) 184, 1187
HpyAV CCTTC 5 cut(s) 40, 101, 134, 446, 611
HpyCH4III ACNGT 4 cut(s) 392, 404, 459, 1020
HpyCH4IV ACGT 4 cut(s) 196, 262, 540, 1111
HpyF10VI GCNNNNNNNGC 1 cut(s) 364
HpyF3I CTNAG 7 cut(s) 138, 607, 633, 678, 832, 1079, 1106
HpySE526I ACGT 4 cut(s) 196, 262, 540, 1111
Hsp92II CATG 6 cut(s) 286, 372, 663, 862, 1058, 1123
Kzo9I GATC 6 cut(s) 163, 478, 742, 881, 1102, 1159
LmnI GCTCC 2 cut(s) 510, 1051
LpnPI CCDG 7 cut(s) 82, 201, 537, 620, 1014, 1182, 1284
Lsp1109I GCAGC 5 cut(s) 199, 608, 874, 1180, 1183
LweI GCATC 2 cut(s) 1333, 1364
MaeI CTAG 3 cut(s) 107, 965, 1378
MaeII ACGT 4 cut(s) 196, 262, 540, 1111
MaeIII GTNAC 5 cut(s) 288, 416, 459, 933, 1248
MalI GATC 6 cut(s) 165, 480, 744, 883, 1104, 1161
MboI GATC 6 cut(s) 163, 478, 742, 881, 1102, 1159
MboII GAAGA 3 cut(s) 55, 476, 1352
MfeI CAATTG 2 cut(s) 339, 1229
MflI RGATCY 4 cut(s) 163, 881, 1102, 1159
MlsI TGGCCA 2 cut(s) 306, 367
MluNI TGGCCA 2 cut(s) 306, 367
MlyI GAGTC 4 cut(s) 455, 625, 650, 811
MmeI TCCRAC 1 cut(s) 249
Mox20I TGGCCA 2 cut(s) 306, 367
Mph1103I ATGCAT 1 cut(s) 732
MroXI GAANNNNTTC 2 cut(s) 29, 991
MscI TGGCCA 2 cut(s) 306, 367
MseI TTAA 4 cut(s) 333, 870, 921, 1214
MslI CAYNNNNRTG 5 cut(s) 281, 384, 711, 1038, 1341
Msp20I TGGCCA 2 cut(s) 306, 367
MspA1I CMGCKG 1 cut(s) 1174
MunI CAATTG 2 cut(s) 339, 1229
MwoI GCNNNNNNNGC 1 cut(s) 364
NcoI CCATGG 1 cut(s) 368
NdeI CATATG 1 cut(s) 553
NdeII GATC 6 cut(s) 163, 478, 742, 881, 1102, 1159
NlaIII CATG 6 cut(s) 286, 372, 663, 862, 1058, 1123
NlaIV GGNNCC 1 cut(s) 165
NmeAIII GCCGAG 1 cut(s) 208
NmuCI GTSAC 3 cut(s) 288, 459, 1248
NsiI ATGCAT 1 cut(s) 732
NspI RCATGY 2 cut(s) 286, 862
PdmI GAANNNNTTC 2 cut(s) 29, 991
PfeI GAWTC 2 cut(s) 564, 1241
PflMI CCANNNNNTGG 1 cut(s) 957
PkrI GCNGC 5 cut(s) 214, 623, 864, 1173, 1195
PleI GAGTC 4 cut(s) 454, 625, 650, 811
PpsI GAGTC 4 cut(s) 454, 625, 650, 811
Ppu21I YACGTR 1 cut(s) 197
PshBI ATTAAT 1 cut(s) 333
PspFI CCCAGC 1 cut(s) 68
PspN4I GGNNCC 1 cut(s) 165
PstI CTGCAG 2 cut(s) 1198, 1320
PstNI CAGNNNCTG 1 cut(s) 1001
PsuI RGATCY 4 cut(s) 163, 881, 1102, 1159
PvuII CAGCTG 1 cut(s) 1174
RsaI GTAC 3 cut(s) 205, 914, 1114
RsaNI GTAC 3 cut(s) 204, 913, 1113
RseI CAYNNNNRTG 5 cut(s) 281, 384, 711, 1038, 1341
SaqAI TTAA 4 cut(s) 333, 870, 921, 1214
SatI GCNGC 5 cut(s) 213, 622, 863, 1172, 1194
Sau3AI GATC 6 cut(s) 163, 478, 742, 881, 1102, 1159
ScaI AGTACT 1 cut(s) 914
SchI GAGTC 4 cut(s) 455, 625, 650, 811
SfaNI GCATC 2 cut(s) 1333, 1364
SfcI CTRYAG 2 cut(s) 1194, 1316
SmiMI CAYNNNNRTG 5 cut(s) 281, 384, 711, 1038, 1341
SmlI CTYRAG 2 cut(s) 158, 1012
SmoI CTYRAG 2 cut(s) 158, 1012
SnaBI TACGTA 1 cut(s) 197
SsiI CCGC 1 cut(s) 775
SspMI CTAG 3 cut(s) 107, 965, 1378
StyI CCWWGG 2 cut(s) 368, 1163
TaaI ACNGT 4 cut(s) 392, 404, 459, 1020
TaiI ACGT 4 cut(s) 199, 265, 543, 1114
TaqI TCGA 6 cut(s) 487, 516, 567, 789, 1239, 1244
TatI WGTACW 2 cut(s) 203, 912
TfiI GAWTC 2 cut(s) 564, 1241
Tru1I TTAA 4 cut(s) 333, 870, 921, 1214
Tru9I TTAA 4 cut(s) 333, 870, 921, 1214
TscAI CASTG 2 cut(s) 1140, 1320
TseFI GTSAC 3 cut(s) 288, 459, 1248
TseI GCWGC 5 cut(s) 212, 621, 862, 1171, 1193
Tsp45I GTSAC 3 cut(s) 288, 459, 1248
TspDTI ATGAA 2 cut(s) 540, 1136
TspGWI ACGGA 3 cut(s) 26, 735, 1267
TspRI CASTG 2 cut(s) 1140, 1320
Van91I CCANNNNNTGG 1 cut(s) 957
VspI ATTAAT 1 cut(s) 333
XagI CCTNNNNNAGG 1 cut(s) 486
XapI RAATTY 4 cut(s) 352, 410, 495, 806
XbaI TCTAGA 1 cut(s) 106
XceI RCATGY 2 cut(s) 286, 862
XmnI GAANNNNTTC 2 cut(s) 29, 991
XspI CTAG 3 cut(s) 107, 965, 1378
ZrmI AGTACT 1 cut(s) 914
Zsp2I ATGCAT 1 cut(s) 732
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.