Prupe.2G096000_v2.0.a1

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000125
Physical Location & Seq
Reverse (-)
15120028 .. 15121827
1800 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G096000.1

Sequence Viewer

Length: 1515 bp
ATGAAGCACATCAACTACAACAACGCCAAGGAGAAGCCAGAACTAAACTTGATGACGATCGGCGCCCTACCGCCTGAAATTCTTATTGACATCCTTTCGAGACTGCCCGTAAATTCGATTTGTTGCATGAGATGTGTATCTAAGGCCCTGTTAAAGATGGTTGACGACCTCTCTTTTTCCACACTGCACATGCGGCGTCGTTTTCTAACTACCTGTTCTACTCCTCAACTTGTTGTTCTTAATGAGTCTTCCTATGATAAATATGACATGTTGTATCCATTGAATTATAGATTCGACTCATTAACAAAGAGTGAACACGCAATTGTTTCCTATTTTGGTTCCAAAGGTCGTTTTTATTCGTCTGCTTTTGTTTTCTGCAACTTGTTTGGCTTTACCGGTCTTAATCCTGAGCATGGAAGGTCATGCCTTAATGGTCTTTATCCAGAGCATGCAAGTTTATCCTTGCGGGTGAATTTTTTCCCTAGTCTTTATCCGGAGCATCGAAGGTCATGCTTGTTGGTGAATCCTTTCAAGGGAGAAGTTCTAATGCTTCCATCAGCAAGTGACGTCCAAGTTCCAACCAATAGTCTCTGCAGTGTTGATTGGTATGGCATGGGATTTGATAATATAACCAACAGCTTCAAGATTGTTCGTGTGTCCACTAATAAAAAAGACTATGTAGCGGCCGAAGTTCTTGTATTGGGGACAAGCTCATGGCGGGAGTTACCTACAGTTCCTCCCTGCTTTCCGACCTGCAAGTCCGCATATACACATGGAGACATGCATTGGTTGGTCTATGGAGATGATGCGTCGTCTGTGCGTATACTTTCTTTCGACTTTAAGAAAGAAGAGTTCTATATGACGCCTCATCCCACCTTCTTGGGGGAAAAGCCGGGTCTCTGGAATTTTCTTCACTTGCTTAATTTTAGGGGATCTTTGACCCTAGTGAATGTTTCTTCACCAGAAAAAGACCATGTGAATATATGGAGACCATATGTTGAGATATGGGGATTGAAAAATTACGATAACAAAGAGTGGGTGCAAAATTATAAAATACATTCGGAACCGTATCTTTTTACATTTTGGGAGCCTACTAGGTTGTCTAAGTGCGGTGAATGGGAGCATGGCATATTTTTCATTCAGAAGATTCCTCCCAATAACCACATAATCTTTGTGGATGTAAGACATGTTTCCATTAAGCATATACTACTTAGAGGTGGAATTACAGTCCATAGTTGTACGGATGACAGGATTTCTCTAAACAATTATGGAGATTTGGTTGAAGCAGAAGAAGAACAAGGTATTATTGAATTCCCCATATCTCGAGAAACTTGGAAGAATCTGATTGATGCTGCAGAAGAAGAAGATAAACCGTGTACAGGGAAAGGGGCAATTGTGATCCATACTCACACCAATAATTCTAAGAAAGTGAAGCAATTCCGGTTCAATAAAGTCATCGCTGAAAATATGTTAACTGAAAGTTGCGCAAAGGTGAGCATTTTCCAAAATTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_3

Protein Analysis

505

Amino Acids

57.92

Weight (kDa)

7.02

Isoelectric Point (pI)

43.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1050
AasI GACNNNNNNGTC 1 cut(s) 757
AatII GACGTC 1 cut(s) 570
Acc16I TGCGCA 1 cut(s) 1486
Acc36I ACCTGC 1 cut(s) 761
AccB1I GGYRCC 1 cut(s) 62
AccI GTMKAC 1 cut(s) 823
AccIII TCCGGA 1 cut(s) 493
AciI CCGC 7 cut(s) 71, 193, 466, 683, 718, 762, 1110
AclWI GGATC 2 cut(s) 940, 1393
AcoI YGGCCR 1 cut(s) 684
AcsI RAATTY 5 cut(s) 78, 112, 472, 904, 1310
AcyI GRCGYC 4 cut(s) 63, 196, 567, 863
AfaI GTAC 2 cut(s) 1240, 1378
AfiI CCNNNNNNNGG 4 cut(s) 413, 533, 882, 1379
AflIII ACRYGT 2 cut(s) 267, 1186
AgeI ACCGGT 1 cut(s) 395
AgsI TTSAA 7 cut(s) 283, 532, 643, 1015, 1283, 1310, 1447
AluBI AGCT 2 cut(s) 639, 711
AluI AGCT 2 cut(s) 639, 711
Alw26I GTCTC 5 cut(s) 94, 593, 771, 902, 982
AlwI GGATC 2 cut(s) 940, 1393
Ama87I CYCGRG 1 cut(s) 1323
Aor13HI TCCGGA 1 cut(s) 493
AoxI GGCC 2 cut(s) 144, 684
ApeKI GCWGC 1 cut(s) 1352
ApoI RAATTY 5 cut(s) 78, 112, 472, 904, 1310
AsiGI ACCGGT 1 cut(s) 395
Asp700I GAANNNNTTC 3 cut(s) 476, 527, 1436
AspLEI GCGC 2 cut(s) 65, 1487
AspS9I GGNCC 1 cut(s) 145
AsuC2I CCSGG 1 cut(s) 894
AsuHPI GGTGA 5 cut(s) 481, 532, 951, 1124, 1504
AvaI CYCGRG 1 cut(s) 1323
BanI GGYRCC 1 cut(s) 62
BbsI GAAGAC 1 cut(s) 240
BbvI GCAGC 1 cut(s) 1339
BccI CCATC 2 cut(s) 151, 562
BcgI CGANNNNNNTGC 2 cut(s) 492, 526
BciVI GTATCC 1 cut(s) 285
BcnI CCSGG 1 cut(s) 894
BcoDI GTCTC 5 cut(s) 94, 593, 771, 902, 982
BfaI CTAG 3 cut(s) 483, 944, 1095
BfmI CTRYAG 3 cut(s) 592, 729, 1353
BfoI RGCGCY 1 cut(s) 66
BfuAI ACCTGC 1 cut(s) 761
BfuI GTATCC 1 cut(s) 285
BisI GCNGC 3 cut(s) 194, 684, 1353
BlsI GCNGC 3 cut(s) 195, 685, 1354
Bme1390I CCNGG 1 cut(s) 894
BmeT110I CYCGRG 1 cut(s) 1323
BmgT120I GGNCC 1 cut(s) 145
BmiI GGNNCC 4 cut(s) 64, 340, 1065, 1089
BmrFI CCNGG 1 cut(s) 894
BmsI GCATC 3 cut(s) 508, 796, 1339
BpiI GAAGAC 1 cut(s) 240
Bpu10I CCTNAGC 1 cut(s) 408
BpuMI CCSGG 1 cut(s) 894
BsaBI GATNNNNATC 2 cut(s) 56, 136
BsaHI GRCGYC 4 cut(s) 63, 196, 567, 863
BsaI GGTCTC 2 cut(s) 902, 982
BsaJI CCNNGG 1 cut(s) 27
BsaWI WCCGGW 3 cut(s) 395, 493, 1440
BsaXI ACNNNNNCTCC 4 cut(s) 721, 751, 1263, 1293
Bsc4I CCNNNNNNNGG 4 cut(s) 413, 533, 882, 1379
Bse118I RCCGGY 1 cut(s) 395
Bse8I GATNNNNATC 2 cut(s) 56, 136
BseAI TCCGGA 1 cut(s) 493
BseDI CCNNGG 1 cut(s) 27
BseGI GGATG 4 cut(s) 90, 868, 1183, 1249
BseJI GATNNNNATC 2 cut(s) 56, 136
BseLI CCNNNNNNNGG 4 cut(s) 413, 533, 882, 1379
BseMII CTCAG 1 cut(s) 399
BseRI GAGGAG 1 cut(s) 213
BseX3I CGGCCG 1 cut(s) 684
BseXI GCAGC 1 cut(s) 1339
BsgI GTGCAG 1 cut(s) 170
Bsh1285I CGRYCG 2 cut(s) 60, 687
BshFI GGCC 2 cut(s) 146, 686
BshNI GGYRCC 1 cut(s) 62
BshTI ACCGGT 1 cut(s) 395
BsiEI CGRYCG 2 cut(s) 60, 687
BsiHKCI CYCGRG 1 cut(s) 1323
BsiSI CCGG 4 cut(s) 396, 494, 893, 1441
BslFI GGGAC 1 cut(s) 718
BslI CCNNNNNNNGG 4 cut(s) 413, 533, 882, 1379
BsmAI GTCTC 5 cut(s) 94, 593, 771, 902, 982
BsmFI GGGAC 1 cut(s) 718
BsnI GGCC 2 cut(s) 146, 686
Bso31I GGTCTC 2 cut(s) 902, 982
BsoBI CYCGRG 1 cut(s) 1323
Bsp13I TCCGGA 1 cut(s) 493
Bsp1407I TGTACA 1 cut(s) 1376
Bsp143I GATC 3 cut(s) 57, 932, 1398
BspACI CCGC 7 cut(s) 71, 193, 466, 683, 718, 762, 1110
BspANI GGCC 2 cut(s) 146, 686
BspCNI CTCAG 1 cut(s) 400
BspEI TCCGGA 1 cut(s) 493
BspLI GGNNCC 4 cut(s) 64, 340, 1065, 1089
BspMAI CTGCAG 2 cut(s) 596, 1357
BspMI ACCTGC 1 cut(s) 761
BspPI GGATC 2 cut(s) 940, 1393
BspT107I GGYRCC 1 cut(s) 62
BspTNI GGTCTC 2 cut(s) 902, 982
BsrFI RCCGGY 1 cut(s) 395
BsrGI TGTACA 1 cut(s) 1376
BssAI RCCGGY 1 cut(s) 395
BssECI CCNNGG 1 cut(s) 27
BssMI GATC 3 cut(s) 57, 932, 1398
BssNAI GTATAC 1 cut(s) 824
BssNI GRCGYC 4 cut(s) 63, 196, 567, 863
BssT1I CCWWGG 1 cut(s) 27
Bst1107I GTATAC 1 cut(s) 824
Bst4CI ACNGT 4 cut(s) 733, 1068, 1228, 1374
Bst6I CTCTTC 1 cut(s) 843
BstACI GRCGYC 4 cut(s) 63, 196, 567, 863
BstAUI TGTACA 1 cut(s) 1376
BstC8I GCNNGC 1 cut(s) 450
BstDEI CTNAG 5 cut(s) 141, 408, 1104, 1211, 1422
BstF5I GGATG 4 cut(s) 90, 868, 1183, 1249
BstH2I RGCGCY 1 cut(s) 66
BstHHI GCGC 2 cut(s) 65, 1487
BstKTI GATC 3 cut(s) 60, 935, 1401
BstMAI GTCTC 5 cut(s) 94, 593, 771, 902, 982
BstMBI GATC 3 cut(s) 57, 932, 1398
BstMCI CGRYCG 2 cut(s) 60, 687
BstMWI GCNNNNNNNGC 1 cut(s) 193
BstNSI RCATGY 5 cut(s) 193, 271, 452, 784, 1190
BstSCI CCNGG 1 cut(s) 892
BstSFI CTRYAG 3 cut(s) 592, 729, 1353
BstV1I GCAGC 1 cut(s) 1339
BstV2I GAAGAC 1 cut(s) 240
BstX2I RGATCY 1 cut(s) 932
BstXI CCANNNNNNTGG 1 cut(s) 880
BstYI RGATCY 1 cut(s) 932
BstZ17I GTATAC 1 cut(s) 824
BstZI CGGCCG 1 cut(s) 684
BsuI GTATCC 1 cut(s) 285
BsuRI GGCC 2 cut(s) 146, 686
BtgZI GCGATG 1 cut(s) 1441
BtsCI GGATG 4 cut(s) 90, 868, 1183, 1249
BtsI GCAGTG 2 cut(s) 182, 601
BtsIMutI CAGTG 2 cut(s) 182, 601
BveI ACCTGC 1 cut(s) 761
Cac8I GCNNGC 1 cut(s) 450
CfoI GCGC 2 cut(s) 65, 1487
Cfr10I RCCGGY 1 cut(s) 395
Cfr13I GGNCC 1 cut(s) 145
CseI GACGC 3 cut(s) 185, 798, 871
Csp6I GTAC 2 cut(s) 1239, 1377
CspAI ACCGGT 1 cut(s) 395
CviJI RGCY 8 cut(s) 37, 146, 390, 639, 686, 711, 892, 1090
CviKI_1 RGCY 8 cut(s) 37, 146, 390, 639, 686, 711, 892, 1090
CviQI GTAC 2 cut(s) 1239, 1377
DdeI CTNAG 5 cut(s) 141, 408, 1104, 1211, 1422
DinI GGCGCC 1 cut(s) 64
DpnI GATC 3 cut(s) 59, 934, 1400
DpnII GATC 3 cut(s) 57, 932, 1398
DrdI GACNNNNNNGTC 1 cut(s) 757
DseDI GACNNNNNNGTC 1 cut(s) 757
EaeI YGGCCR 1 cut(s) 684
EagI CGGCCG 1 cut(s) 684
Eam1104I CTCTTC 1 cut(s) 843
EarI CTCTTC 1 cut(s) 843
EclXI CGGCCG 1 cut(s) 684
Eco130I CCWWGG 1 cut(s) 27
Eco31I GGTCTC 2 cut(s) 902, 982
Eco52I CGGCCG 1 cut(s) 684
Eco88I CYCGRG 1 cut(s) 1323
EcoO109I RGGNCCY 1 cut(s) 145
EcoRI GAATTC 1 cut(s) 1310
EcoT14I CCWWGG 1 cut(s) 27
EcoT22I ATGCAT 1 cut(s) 786
EgeI GGCGCC 1 cut(s) 64
EheI GGCGCC 1 cut(s) 64
ErhI CCWWGG 1 cut(s) 27
FaqI GGGAC 1 cut(s) 718
FauI CCCGC 2 cut(s) 459, 711
FauNDI CATATG 1 cut(s) 994
FblI GTMKAC 1 cut(s) 823
Fnu4HI GCNGC 3 cut(s) 194, 684, 1353
FokI GGATG 4 cut(s) 77, 855, 1190, 1256
Fsp4HI GCNGC 3 cut(s) 194, 684, 1353
FspBI CTAG 3 cut(s) 483, 944, 1095
FspI TGCGCA 1 cut(s) 1486
GlaI GCGC 2 cut(s) 64, 1486
GluI GCNGC 3 cut(s) 194, 684, 1353
HaeII RGCGCY 1 cut(s) 66
HaeIII GGCC 2 cut(s) 146, 686
HapII CCGG 4 cut(s) 396, 494, 893, 1441
HgaI GACGC 3 cut(s) 185, 798, 871
HhaI GCGC 2 cut(s) 65, 1487
Hin1I GRCGYC 4 cut(s) 63, 196, 567, 863
Hin6I GCGC 2 cut(s) 63, 1485
HinP1I GCGC 2 cut(s) 63, 1485
HincII GTYRAC 2 cut(s) 163, 1473
HindII GTYRAC 2 cut(s) 163, 1473
HinfI GANTC 6 cut(s) 245, 291, 296, 523, 1147, 1339
HpaI GTTAAC 1 cut(s) 1473
HpaII CCGG 4 cut(s) 396, 494, 893, 1441
HphI GGTGA 5 cut(s) 481, 532, 951, 1124, 1504
Hpy166II GTNNAC 6 cut(s) 163, 314, 660, 824, 1377, 1473
Hpy188I TCNGA 4 cut(s) 750, 1063, 1143, 1344
Hpy188III TCNNGA 8 cut(s) 99, 407, 443, 494, 643, 901, 1323, 1325
Hpy8I GTNNAC 6 cut(s) 163, 314, 660, 824, 1377, 1473
Hpy99I CGWCG 2 cut(s) 201, 814
HpyAV CCTTC 3 cut(s) 411, 498, 886
HpyCH4III ACNGT 4 cut(s) 733, 1068, 1228, 1374
HpyCH4IV ACGT 1 cut(s) 567
HpyCH4V TGCA 9 cut(s) 126, 187, 378, 452, 594, 756, 784, 1042, 1355
HpyF10VI GCNNNNNNNGC 1 cut(s) 193
HpyF3I CTNAG 5 cut(s) 141, 408, 1104, 1211, 1422
HpySE526I ACGT 1 cut(s) 567
Hsp92I GRCGYC 4 cut(s) 63, 196, 567, 863
HspAI GCGC 2 cut(s) 63, 1485
KasI GGCGCC 1 cut(s) 62
Kpn2I TCCGGA 1 cut(s) 493
KspAI GTTAAC 1 cut(s) 1473
Kzo9I GATC 3 cut(s) 57, 932, 1398
LmnI GCTCC 3 cut(s) 496, 1087, 1120
Lsp1109I GCAGC 1 cut(s) 1339
LweI GCATC 3 cut(s) 508, 796, 1339
MaeI CTAG 3 cut(s) 483, 944, 1095
MaeII ACGT 1 cut(s) 567
MaeIII GTNAC 2 cut(s) 563, 723
MalI GATC 3 cut(s) 59, 934, 1400
MboI GATC 3 cut(s) 57, 932, 1398
MfeI CAATTG 2 cut(s) 321, 1392
MflI RGATCY 1 cut(s) 932
Mly113I GGCGCC 1 cut(s) 63
MlyI GAGTC 2 cut(s) 254, 290
MmeI TCCRAC 2 cut(s) 602, 773
MnlI CCTC 6 cut(s) 179, 234, 747, 876, 1161, 1208
Mph1103I ATGCAT 1 cut(s) 786
MroI TCCGGA 1 cut(s) 493
MroXI GAANNNNTTC 3 cut(s) 476, 527, 1436
MseI TTAA 9 cut(s) 152, 240, 302, 402, 429, 840, 921, 1197, 1472
MspI CCGG 4 cut(s) 396, 494, 893, 1441
MspR9I CCNGG 1 cut(s) 894
MunI CAATTG 2 cut(s) 321, 1392
MwoI GCNNNNNNNGC 1 cut(s) 193
NarI GGCGCC 1 cut(s) 63
NciI CCSGG 1 cut(s) 894
NdeI CATATG 1 cut(s) 994
NdeII GATC 3 cut(s) 57, 932, 1398
NlaIV GGNNCC 4 cut(s) 64, 340, 1065, 1089
NmuCI GTSAC 1 cut(s) 563
NsbI TGCGCA 1 cut(s) 1486
NsiI ATGCAT 1 cut(s) 786
NspI RCATGY 5 cut(s) 193, 271, 452, 784, 1190
PaeI GCATGC 1 cut(s) 452
PaeR7I CTCGAG 1 cut(s) 1323
PciI ACATGT 2 cut(s) 267, 1186
PdmI GAANNNNTTC 3 cut(s) 476, 527, 1436
PfeI GAWTC 4 cut(s) 291, 523, 1147, 1339
PinAI ACCGGT 1 cut(s) 395
PkrI GCNGC 3 cut(s) 195, 685, 1354
Ple19I CGATCG 1 cut(s) 60
PleI GAGTC 2 cut(s) 253, 290
PluTI GGCGCC 1 cut(s) 66
PpsI GAGTC 2 cut(s) 253, 290
PscI ACATGT 2 cut(s) 267, 1186
PsiI TTATAA 1 cut(s) 1050
PspN4I GGNNCC 4 cut(s) 64, 340, 1065, 1089
PspPI GGNCC 1 cut(s) 145
PstI CTGCAG 2 cut(s) 596, 1357
PsuI RGATCY 1 cut(s) 932
PvuI CGATCG 1 cut(s) 60
RsaI GTAC 2 cut(s) 1240, 1378
RsaNI GTAC 2 cut(s) 1239, 1377
SaqAI TTAA 9 cut(s) 152, 240, 302, 402, 429, 840, 921, 1197, 1472
SatI GCNGC 3 cut(s) 194, 684, 1353
Sau3AI GATC 3 cut(s) 57, 932, 1398
Sau96I GGNCC 1 cut(s) 145
SchI GAGTC 2 cut(s) 254, 290
ScrFI CCNGG 1 cut(s) 894
SfaNI GCATC 3 cut(s) 508, 796, 1339
SfcI CTRYAG 3 cut(s) 592, 729, 1353
SfoI GGCGCC 1 cut(s) 64
Sfr274I CTCGAG 1 cut(s) 1323
SlaI CTCGAG 1 cut(s) 1323
SmlI CTYRAG 1 cut(s) 1323
SmoI CTYRAG 1 cut(s) 1323
SphI GCATGC 1 cut(s) 452
SsiI CCGC 7 cut(s) 71, 193, 466, 683, 718, 762, 1110
SspDI GGCGCC 1 cut(s) 62
SspMI CTAG 3 cut(s) 483, 944, 1095
StyD4I CCNGG 1 cut(s) 892
StyI CCWWGG 1 cut(s) 27
TaaI ACNGT 4 cut(s) 733, 1068, 1228, 1374
TaiI ACGT 1 cut(s) 570
TaqI TCGA 6 cut(s) 98, 116, 294, 502, 834, 1324
TatI WGTACW 1 cut(s) 1376
TauI GCSGC 2 cut(s) 196, 686
TfiI GAWTC 4 cut(s) 291, 523, 1147, 1339
Tru1I TTAA 9 cut(s) 152, 240, 302, 402, 429, 840, 921, 1197, 1472
Tru9I TTAA 9 cut(s) 152, 240, 302, 402, 429, 840, 921, 1197, 1472
TscAI CASTG 2 cut(s) 189, 601
TseFI GTSAC 1 cut(s) 563
TseI GCWGC 1 cut(s) 1352
Tsp45I GTSAC 1 cut(s) 563
TspDTI ATGAA 2 cut(s) 17, 1126
TspGWI ACGGA 1 cut(s) 1256
TspRI CASTG 2 cut(s) 189, 601
XapI RAATTY 5 cut(s) 78, 112, 472, 904, 1310
XceI RCATGY 5 cut(s) 193, 271, 452, 784, 1190
XhoI CTCGAG 1 cut(s) 1323
XmiI GTMKAC 1 cut(s) 823
XmnI GAANNNNTTC 3 cut(s) 476, 527, 1436
XspI CTAG 3 cut(s) 483, 944, 1095
ZraI GACGTC 1 cut(s) 568
Zsp2I ATGCAT 1 cut(s) 786
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.