Rroxscaffold_2G00086850

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000125
Physical Location & Seq
Reverse (-)
9018880 .. 9025289
6410 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00086850.1

Sequence Viewer

Length: 1263 bp
ATGGAATTGGTCCCGGGTATGTCTCAAATTGTAGAATTGCAGAGTACTCCGACTTCCATAACTATGGAGATTGCAAGGACCAAGGAAATGTCCAGCGGCAGCCACAGCTCAAAGGACCTCCCTACGGCGATCCTCCTCAACATCCTTTCTCGACTGCCAGCAAAATCTCTTTTTCGTTTCCAATGTGTCTCTAAGATTTTCTATAAGCTAGTCAACGACCCCTCTCTAGCTGCAATGCATCTTCAGCACACTGATATGATTGAGGAGCCACCTCTAGTCCTGGTCCATTCTAGGTCTGCATCCAAATATTCCAGATTAATGCTGTTTCGAGGCTGGAAATACAATGGCGATAGTTGGACAGCAACAAGCTATGATGACAGTTTCTCTTCAGGTATTTTGTCCATTGAAACTAAATATGAGCTAGAGTTTGCTTCTGGTGGCTTGCTTTGCTTTAAGGACTCTAGTTTATCAAGAGGTCCAGCCCTATTATGCAATCCACTTAGGGGAGAAGCTCTAGAGCTCCCACCTTCTAATGTTAATTCACTATCCCGCTTGAATGAGTGGTACGGTATAGGAGTGGATGCCACTACCAGCACCTACAAGATTGTTAATATTGTTTTCGGGATTGGTCCTAGCCGTTCCAGTTCATATTTGACCCAAGTTCATGTACTGGGGACAAGCTCTTGGCGACGAATACCCGCAGTTCCTCCTTGTGGTTTAAGTAAGCAGAATGCATTTGCATATGGAAACACATATTGGTTGATTGGACAATGTATACTATGTTTCGACTTCAATGAGGAGAGGTTCATATGGACTTCTCATCCCAACTTACCCTCCAAAAGGGTTCTTAACTTGCTTAATTTGAGAGGATCTCTGGCCATTGTTGATGCTACTTCAGTATCAGTTACCGAAGTTGAGGTATGGGTGTTGAAAAGTCACGATAAGAAAGAATGGGTGAAGGACTACAACATAAAACTCAATGTTGGTCCATCTTATTGTTATGAATGGTGGCCTCTCAATTGTTTTATTCTTGTTGATGACTCTAGGAGCAGAAAAGGCATTGTGGGTGTGCTCCATTACAATCTAGGGTGGGGTTCTAGGAAACGCTTGCGTTGTGGAAATGGAAGAGTTGAAGTGATGAATTCCGTCCCCAAGATCTTCAGTTACACCGGAAGCCTGATTTCTCTAAAAACATATGGTAATTTGTTGTTAGAAATCAAAGGCAAAGTCAGGGGATTGGATTTGTCTGGGAAAGCCACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

420

Amino Acids

46.91

Weight (kDa)

9.13

Isoelectric Point (pI)

41.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 39 - 76 7.8e-10 F-box domain
F-box-like PF12937 39 - 76 7.6e-09 F-box-like
FBA_1 PF07734 143 - 333 9.7e-15 F-box associated beta propeller domain
Beta-prop_KIB1-4 PF03478 145 - 320 5.7e-06 KIB1-4 beta-propeller
FBA_3 PF08268 146 - 321 4.1e-19 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 775
AciI CCGC 3 cut(s) 96, 550, 699
AclWI GGATC 2 cut(s) 124, 877
AcoI YGGCCR 1 cut(s) 876
AcsI RAATTY 1 cut(s) 1141
AcuI CTGAAG 4 cut(s) 227, 372, 879, 1144
AfaI GTAC 3 cut(s) 46, 566, 669
AfiI CCNNNNNNNGG 4 cut(s) 124, 503, 713, 840
AgsI TTSAA 5 cut(s) 407, 556, 793, 931, 1133
AjnI CCWGG 1 cut(s) 279
AjuI GAANNNNNNNTTGG 2 cut(s) 739, 771
AluBI AGCT 8 cut(s) 108, 208, 230, 369, 421, 512, 520, 681
AluI AGCT 8 cut(s) 108, 208, 230, 369, 421, 512, 520, 681
Alw21I GWGCWC 2 cut(s) 522, 1074
Alw26I GTCTC 2 cut(s) 27, 193
AlwI GGATC 2 cut(s) 124, 877
Ama87I CYCGRG 1 cut(s) 13
AoxI GGCC 2 cut(s) 876, 1010
ApeKI GCWGC 2 cut(s) 99, 230
ApoI RAATTY 1 cut(s) 1141
ArsI GACNNNNNNTTYG 2 cut(s) 1212, 1244
AseI ATTAAT 1 cut(s) 317
AspS9I GGNCC 7 cut(s) 10, 78, 115, 283, 476, 629, 986
AsuC2I CCSGG 2 cut(s) 14, 15
AsuHPI GGTGA 1 cut(s) 967
AvaI CYCGRG 1 cut(s) 13
AvaII GGWCC 7 cut(s) 10, 78, 115, 283, 476, 629, 986
BaeI ACNNNNGTAYC 2 cut(s) 882, 915
BalI TGGCCA 1 cut(s) 878
BanII GRGCYC 1 cut(s) 522
BarI GAAGNNNNNNTAC 2 cut(s) 37, 69
Bbv12I GWGCWC 2 cut(s) 522, 1074
BbvI GCAGC 2 cut(s) 111, 217
BccI CCATC 1 cut(s) 997
BceAI ACGGC 2 cut(s) 141, 621
BciT130I CCWGG 1 cut(s) 281
BcnI CCSGG 2 cut(s) 14, 15
BcoDI GTCTC 2 cut(s) 27, 193
BglII AGATCT 1 cut(s) 1155
BisI GCNGC 3 cut(s) 97, 100, 231
BlsI GCNGC 3 cut(s) 98, 101, 232
BmcAI AGTACT 1 cut(s) 46
Bme1390I CCNGG 3 cut(s) 14, 15, 281
Bme18I GGWCC 7 cut(s) 10, 78, 115, 283, 476, 629, 986
BmeT110I CYCGRG 1 cut(s) 13
BmgT120I GGNCC 7 cut(s) 10, 78, 115, 283, 476, 629, 986
BmiI GGNNCC 2 cut(s) 12, 267
BmrFI CCNGG 3 cut(s) 14, 15, 281
BmrI ACTGGG 1 cut(s) 680
BmsI GCATC 4 cut(s) 247, 308, 571, 877
BmuI ACTGGG 1 cut(s) 680
BplI GAGNNNNNCTC 2 cut(s) 856, 888
BpuMI CCSGG 2 cut(s) 14, 15
BsaJI CCNNGG 2 cut(s) 13, 81
BsaWI WCCGGW 1 cut(s) 1169
BsaXI ACNNNNNCTCC 2 cut(s) 818, 848
Bsc4I CCNNNNNNNGG 4 cut(s) 124, 503, 713, 840
Bse1I ACTGG 2 cut(s) 642, 675
Bse3DI GCAATG 1 cut(s) 240
BseBI CCWGG 1 cut(s) 281
BseDI CCNNGG 2 cut(s) 13, 81
BseGI GGATG 4 cut(s) 141, 299, 586, 820
BseLI CCNNNNNNNGG 4 cut(s) 124, 503, 713, 840
BseMI GCAATG 1 cut(s) 240
BseNI ACTGG 2 cut(s) 642, 675
BseRI GAGGAG 3 cut(s) 125, 278, 812
BseXI GCAGC 2 cut(s) 111, 217
BshFI GGCC 2 cut(s) 878, 1012
BsiHKAI GWGCWC 2 cut(s) 522, 1074
BsiHKCI CYCGRG 1 cut(s) 13
BsiSI CCGG 2 cut(s) 14, 1170
BslFI GGGAC 2 cut(s) 688, 1133
BslI CCNNNNNNNGG 4 cut(s) 124, 503, 713, 840
BsmAI GTCTC 2 cut(s) 27, 193
BsmFI GGGAC 2 cut(s) 688, 1133
BsmI GAATGC 1 cut(s) 736
BsnI GGCC 2 cut(s) 878, 1012
BsoBI CYCGRG 1 cut(s) 13
Bsp1286I GDGCHC 2 cut(s) 522, 1074
Bsp143I GATC 3 cut(s) 129, 869, 1155
BspACI CCGC 3 cut(s) 96, 550, 699
BspANI GGCC 2 cut(s) 878, 1012
BspLI GGNNCC 2 cut(s) 12, 267
BspPI GGATC 2 cut(s) 124, 877
BsrDI GCAATG 1 cut(s) 240
BsrI ACTGG 2 cut(s) 642, 675
BssECI CCNNGG 2 cut(s) 13, 81
BssMI GATC 3 cut(s) 129, 869, 1155
BssNAI GTATAC 1 cut(s) 776
BssT1I CCWWGG 1 cut(s) 81
Bst1107I GTATAC 1 cut(s) 776
Bst2UI CCWGG 1 cut(s) 281
Bst4CI ACNGT 2 cut(s) 380, 569
Bst6I CTCTTC 2 cut(s) 391, 1120
BstC8I GCNNGC 3 cut(s) 159, 443, 1109
BstDEI CTNAG 3 cut(s) 192, 500, 1260
BstENI CCTNNNNNAGG 1 cut(s) 838
BstF5I GGATG 4 cut(s) 141, 299, 586, 820
BstKTI GATC 3 cut(s) 132, 872, 1158
BstMAI GTCTC 2 cut(s) 27, 193
BstMBI GATC 3 cut(s) 129, 869, 1155
BstMWI GCNNNNNNNGC 4 cut(s) 105, 244, 447, 1056
BstNI CCWGG 1 cut(s) 281
BstSCI CCNGG 3 cut(s) 12, 13, 279
BstV1I GCAGC 2 cut(s) 111, 217
BstX2I RGATCY 2 cut(s) 869, 1155
BstXI CCANNNNNNTGG 1 cut(s) 64
BstYI RGATCY 2 cut(s) 869, 1155
BstZ17I GTATAC 1 cut(s) 776
BsuRI GGCC 2 cut(s) 878, 1012
BtsCI GGATG 4 cut(s) 141, 299, 586, 820
BtsIMutI CAGTG 1 cut(s) 249
Cac8I GCNNGC 3 cut(s) 159, 443, 1109
Cfr13I GGNCC 7 cut(s) 10, 78, 115, 283, 476, 629, 986
Cfr9I CCCGGG 1 cut(s) 13
Csp6I GTAC 3 cut(s) 45, 565, 668
CviAII CATG 1 cut(s) 665
CviQI GTAC 3 cut(s) 45, 565, 668
DdeI CTNAG 3 cut(s) 192, 500, 1260
DpnI GATC 3 cut(s) 131, 871, 1157
DpnII GATC 3 cut(s) 129, 869, 1155
EaeI YGGCCR 1 cut(s) 876
Eam1104I CTCTTC 2 cut(s) 391, 1120
EarI CTCTTC 2 cut(s) 391, 1120
Ecl136II GAGCTC 1 cut(s) 520
Eco130I CCWWGG 1 cut(s) 81
Eco24I GRGCYC 1 cut(s) 522
Eco47I GGWCC 7 cut(s) 10, 78, 115, 283, 476, 629, 986
Eco53kI GAGCTC 1 cut(s) 520
Eco57I CTGAAG 4 cut(s) 227, 372, 879, 1144
Eco88I CYCGRG 1 cut(s) 13
EcoICRI GAGCTC 1 cut(s) 520
EcoNI CCTNNNNNAGG 1 cut(s) 838
EcoO109I RGGNCCY 1 cut(s) 115
EcoRI GAATTC 1 cut(s) 1141
EcoRII CCWGG 1 cut(s) 279
EcoT14I CCWWGG 1 cut(s) 81
EcoT22I ATGCAT 2 cut(s) 240, 736
EcoT38I GRGCYC 1 cut(s) 522
ErhI CCWWGG 1 cut(s) 81
FaeI CATG 1 cut(s) 668
FaqI GGGAC 2 cut(s) 688, 1133
FatI CATG 1 cut(s) 664
FauI CCCGC 2 cut(s) 557, 706
FauNDI CATATG 3 cut(s) 742, 809, 1195
FblI GTMKAC 1 cut(s) 775
Fnu4HI GCNGC 3 cut(s) 97, 100, 231
FokI GGATG 4 cut(s) 128, 286, 593, 807
FriOI GRGCYC 1 cut(s) 522
Fsp4HI GCNGC 3 cut(s) 97, 100, 231
GluI GCNGC 3 cut(s) 97, 100, 231
HaeIII GGCC 2 cut(s) 878, 1012
HapII CCGG 2 cut(s) 14, 1170
Hin1II CATG 1 cut(s) 668
HincII GTYRAC 1 cut(s) 214
HindII GTYRAC 1 cut(s) 214
HinfI GANTC 2 cut(s) 458, 1040
HpaII CCGG 2 cut(s) 14, 1170
HphI GGTGA 1 cut(s) 967
Hpy166II GTNNAC 2 cut(s) 214, 776
Hpy188I TCNGA 1 cut(s) 51
Hpy188III TCNNGA 6 cut(s) 150, 312, 471, 515, 622, 938
Hpy8I GTNNAC 2 cut(s) 214, 776
Hpy99I CGWCG 1 cut(s) 693
HpyAV CCTTC 2 cut(s) 537, 952
HpyCH4III ACNGT 2 cut(s) 380, 569
HpyCH4V TGCA 8 cut(s) 40, 74, 233, 238, 299, 492, 734, 740
HpyF10VI GCNNNNNNNGC 4 cut(s) 105, 244, 447, 1056
HpyF3I CTNAG 3 cut(s) 192, 500, 1260
Hsp92II CATG 1 cut(s) 668
Kzo9I GATC 3 cut(s) 129, 869, 1155
LmnI GCTCC 4 cut(s) 265, 525, 1047, 1077
Lsp1109I GCAGC 2 cut(s) 111, 217
LweI GCATC 4 cut(s) 247, 308, 571, 877
MaeIII GTNAC 3 cut(s) 904, 935, 1163
MalI GATC 3 cut(s) 131, 871, 1157
MboI GATC 3 cut(s) 129, 869, 1155
MboII GAAGA 4 cut(s) 233, 378, 1137, 1150
MfeI CAATTG 1 cut(s) 1018
MflI RGATCY 2 cut(s) 869, 1155
MhlI GDGCHC 2 cut(s) 522, 1074
MlsI TGGCCA 1 cut(s) 878
MluCI AATT 8 cut(s) 5, 27, 35, 538, 859, 1018, 1141, 1201
MluNI TGGCCA 1 cut(s) 878
MlyI GAGTC 2 cut(s) 452, 1034
MmeI TCCRAC 2 cut(s) 74, 335
Mox20I TGGCCA 1 cut(s) 878
Mph1103I ATGCAT 2 cut(s) 240, 736
MscI TGGCCA 1 cut(s) 878
MseI TTAA 7 cut(s) 317, 453, 537, 609, 719, 849, 858
MslI CAYNNNNRTG 2 cut(s) 62, 254
Msp20I TGGCCA 1 cut(s) 878
MspA1I CMGCKG 1 cut(s) 96
MspI CCGG 2 cut(s) 14, 1170
MspR9I CCNGG 3 cut(s) 14, 15, 281
MunI CAATTG 1 cut(s) 1018
Mva1269I GAATGC 1 cut(s) 736
MvaI CCWGG 1 cut(s) 281
MwoI GCNNNNNNNGC 4 cut(s) 105, 244, 447, 1056
NciI CCSGG 2 cut(s) 14, 15
NdeI CATATG 3 cut(s) 742, 809, 1195
NdeII GATC 3 cut(s) 129, 869, 1155
NlaIII CATG 1 cut(s) 668
NlaIV GGNNCC 2 cut(s) 12, 267
NmuCI GTSAC 1 cut(s) 935
NsiI ATGCAT 2 cut(s) 240, 736
PctI GAATGC 1 cut(s) 736
PkrI GCNGC 3 cut(s) 98, 101, 232
PleI GAGTC 2 cut(s) 452, 1034
PpsI GAGTC 2 cut(s) 452, 1034
PpuMI RGGWCCY 1 cut(s) 115
PshBI ATTAAT 1 cut(s) 317
Psp124BI GAGCTC 1 cut(s) 522
Psp5II RGGWCCY 1 cut(s) 115
Psp6I CCWGG 1 cut(s) 279
PspGI CCWGG 1 cut(s) 279
PspN4I GGNNCC 2 cut(s) 12, 267
PspPI GGNCC 7 cut(s) 10, 78, 115, 283, 476, 629, 986
PspPPI RGGWCCY 1 cut(s) 115
PsuI RGATCY 2 cut(s) 869, 1155
RsaI GTAC 3 cut(s) 46, 566, 669
RsaNI GTAC 3 cut(s) 45, 565, 668
RseI CAYNNNNRTG 2 cut(s) 62, 254
SacI GAGCTC 1 cut(s) 522
SaqAI TTAA 7 cut(s) 317, 453, 537, 609, 719, 849, 858
SatI GCNGC 3 cut(s) 97, 100, 231
Sau3AI GATC 3 cut(s) 129, 869, 1155
Sau96I GGNCC 7 cut(s) 10, 78, 115, 283, 476, 629, 986
ScaI AGTACT 1 cut(s) 46
SchI GAGTC 2 cut(s) 452, 1034
ScrFI CCNGG 3 cut(s) 14, 15, 281
SduI GDGCHC 2 cut(s) 522, 1074
SfaNI GCATC 4 cut(s) 247, 308, 571, 877
SinI GGWCC 7 cut(s) 10, 78, 115, 283, 476, 629, 986
SmaI CCCGGG 1 cut(s) 15
SmiMI CAYNNNNRTG 2 cut(s) 62, 254
Sse9I AATT 8 cut(s) 5, 27, 35, 538, 859, 1018, 1141, 1201
SsiI CCGC 3 cut(s) 96, 550, 699
SspI AATATT 2 cut(s) 308, 613
SstI GAGCTC 1 cut(s) 522
StyD4I CCNGG 3 cut(s) 12, 13, 279
StyI CCWWGG 1 cut(s) 81
TaaI ACNGT 2 cut(s) 380, 569
TaqI TCGA 3 cut(s) 151, 328, 786
TasI AATT 8 cut(s) 5, 27, 35, 538, 859, 1018, 1141, 1201
TatI WGTACW 2 cut(s) 44, 667
TauI GCSGC 1 cut(s) 99
Tru1I TTAA 7 cut(s) 317, 453, 537, 609, 719, 849, 858
Tru9I TTAA 7 cut(s) 317, 453, 537, 609, 719, 849, 858
TscAI CASTG 1 cut(s) 256
TseFI GTSAC 1 cut(s) 935
TseI GCWGC 2 cut(s) 99, 230
Tsp45I GTSAC 1 cut(s) 935
TspDTI ATGAA 5 cut(s) 636, 653, 796, 1017, 1154
TspGWI ACGGA 1 cut(s) 1135
TspMI CCCGGG 1 cut(s) 13
TspRI CASTG 1 cut(s) 256
VpaK11BI GGWCC 7 cut(s) 10, 78, 115, 283, 476, 629, 986
VspI ATTAAT 1 cut(s) 317
XagI CCTNNNNNAGG 1 cut(s) 838
XapI RAATTY 1 cut(s) 1141
XbaI TCTAGA 1 cut(s) 514
XmaI CCCGGG 1 cut(s) 13
XmiI GTMKAC 1 cut(s) 775
ZrmI AGTACT 1 cut(s) 46
Zsp2I ATGCAT 2 cut(s) 240, 736
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.