Rh2DG594200

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000125
Physical Location & Seq
Forward (+)
82709515 .. 82710747
1233 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG594200.1

Sequence Viewer

Length: 1203 bp
ATGGAGATTGCAAGGACCAAGGAAATGTCCAGCGGCAGCCACAGCTCAAAGGACCTCCCTACGGCGATCCTCCTCAACATCCTTTCTCGACTGCCAGCAAAATCTCTTTTTCGTTTCCAATGTGTCTCTAAGATTTTCTATAAGCTAGTCAACGACCCCTCTCTAGCTGCAATGCATCTTCAGCACACCGATATGATTGAGGAGCCACCTCTAGTCATGGTCCATTCTAGGTCTGCATCCAAATATTCCAGATTAATGCTGTTTCGAGGCTGGAAATACAATGGCGATAGTTGGACAGCAACAAGCTATGATGACAGTTTCTCTTCAGGTATTTTGTCCATTGAAACTAAATATGAGCTAGAGTTTGCTTCTGGTGGCTTGCTTTGCTTTAAGGACTCTAGTTTATCAAGAGGTCCAGCCCTATTATGCAATCCACTTAGGGGAGAAGCTCTAGAGCTCCCACCTTTTAATGTTAATTCACTATCCCGCTTGAATGAGTGGTACGGTATAGGAGTGGATGCCACTACCAGCACCTACAAGATTGTTAATATTGTTTTCGGGATTGATCCTAGCCGTTCCAGTTCATATTTGACCCAAGTTCATGTATTGGGGACAAGCTCTTGGCGACGAATACCCGCGGTTCCTCCTTGTGGTTTACGTAAGCAGAATGCATTTGCATATGGAAACACATATTGGTTGATTGGACAATGTATACTATGTTTCGACTTCAATGAGGAGAGGTTCATATGGACTTCTCATCCCAACTTACCCTCCAAAAGGGTTCTTAACTTGCTTAATTTGAGAGGATCTCTGGCCATTGTTGATGCTACTTCAGTATCAGTTACCGAAGTTGAGGTATGGGTGTTGAAAAGTCATGATAAGAAAGAATGGGTGAAAGACTACAACATAAAACTCAATGTTGGTCCATCTTATTGTTATGAATGGTGGCCTCTCAATTGTTTTATTCTTGTTGATGACTCTAGGAGCAGAAAAGGCATTGTGGGTGTGCTCCATTACAATCTAGGGTGGGGTTCTAGGAAACGCTTGCGTTGTGGAAAAGGAAGAGTTGAAGTGAATTCCGTCCCCAAGATCTTCAGTTACACCGGAAGCCTGATTTCTCTAAAAACATATGGTAATTTATTGGTAGAAGGATCAGAGGCAGATCAGGGGATTGGAACTTTGTTATCTGGGAAAGCCACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

400

Amino Acids

44.81

Weight (kDa)

9.07

Isoelectric Point (pI)

39.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 18 - 55 7.3e-10 F-box domain
F-box-like PF12937 18 - 55 7.1e-09 F-box-like
FBA_1 PF07734 122 - 313 7.5e-15 F-box associated beta propeller domain
Beta-prop_KIB1-4 PF03478 123 - 299 4.5e-07 KIB1-4 beta-propeller
FBA_3 PF08268 125 - 300 3.6e-19 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 712
AccII CGCG 1 cut(s) 638
AciI CCGC 4 cut(s) 33, 487, 636, 638
AclWI GGATC 4 cut(s) 61, 560, 814, 1159
AcoI YGGCCR 1 cut(s) 813
AcsI RAATTY 1 cut(s) 1075
AcuI CTGAAG 4 cut(s) 164, 309, 816, 1078
AfaI GTAC 1 cut(s) 503
AfiI CCNNNNNNNGG 4 cut(s) 61, 440, 650, 777
AgsI TTSAA 5 cut(s) 344, 493, 730, 868, 1070
AjuI GAANNNNNNNTTGG 2 cut(s) 676, 708
AluBI AGCT 8 cut(s) 45, 145, 167, 306, 358, 449, 457, 618
AluI AGCT 8 cut(s) 45, 145, 167, 306, 358, 449, 457, 618
Alw21I GWGCWC 2 cut(s) 459, 1011
Alw26I GTCTC 1 cut(s) 130
AlwI GGATC 4 cut(s) 61, 560, 814, 1159
AoxI GGCC 2 cut(s) 813, 947
ApeKI GCWGC 2 cut(s) 36, 167
ApoI RAATTY 1 cut(s) 1075
AseI ATTAAT 1 cut(s) 254
AspS9I GGNCC 5 cut(s) 15, 52, 220, 413, 923
AsuHPI GGTGA 1 cut(s) 904
AvaII GGWCC 5 cut(s) 15, 52, 220, 413, 923
BaeI ACNNNNGTAYC 2 cut(s) 819, 852
BalI TGGCCA 1 cut(s) 815
BanII GRGCYC 1 cut(s) 459
Bbv12I GWGCWC 2 cut(s) 459, 1011
BbvI GCAGC 2 cut(s) 48, 154
BccI CCATC 1 cut(s) 934
BceAI ACGGC 2 cut(s) 78, 558
BcoDI GTCTC 1 cut(s) 130
BglII AGATCT 1 cut(s) 1089
BisI GCNGC 3 cut(s) 34, 37, 168
BlsI GCNGC 3 cut(s) 35, 38, 169
Bme18I GGWCC 5 cut(s) 15, 52, 220, 413, 923
BmgT120I GGNCC 5 cut(s) 15, 52, 220, 413, 923
BmiI GGNNCC 2 cut(s) 204, 642
BmsI GCATC 4 cut(s) 184, 245, 508, 814
BplI GAGNNNNNCTC 2 cut(s) 793, 825
BsaAI YACGTR 1 cut(s) 659
BsaJI CCNNGG 2 cut(s) 18, 636
BsaWI WCCGGW 1 cut(s) 1103
BsaXI ACNNNNNCTCC 2 cut(s) 755, 785
Bsc4I CCNNNNNNNGG 4 cut(s) 61, 440, 650, 777
Bse1I ACTGG 1 cut(s) 579
Bse3DI GCAATG 1 cut(s) 177
BseDI CCNNGG 2 cut(s) 18, 636
BseGI GGATG 4 cut(s) 78, 236, 523, 757
BseLI CCNNNNNNNGG 4 cut(s) 61, 440, 650, 777
BseMI GCAATG 1 cut(s) 177
BseNI ACTGG 1 cut(s) 579
BseRI GAGGAG 3 cut(s) 62, 215, 749
BseXI GCAGC 2 cut(s) 48, 154
Bsh1236I CGCG 1 cut(s) 638
BshFI GGCC 2 cut(s) 815, 949
BsiHKAI GWGCWC 2 cut(s) 459, 1011
BsiSI CCGG 1 cut(s) 1104
BslFI GGGAC 2 cut(s) 625, 1067
BslI CCNNNNNNNGG 4 cut(s) 61, 440, 650, 777
BsmAI GTCTC 1 cut(s) 130
BsmFI GGGAC 2 cut(s) 625, 1067
BsmI GAATGC 1 cut(s) 673
BsnI GGCC 2 cut(s) 815, 949
Bsp1286I GDGCHC 2 cut(s) 459, 1011
Bsp143I GATC 6 cut(s) 66, 565, 806, 1089, 1151, 1162
BspACI CCGC 4 cut(s) 33, 487, 636, 638
BspANI GGCC 2 cut(s) 815, 949
BspFNI CGCG 1 cut(s) 638
BspHI TCATGA 1 cut(s) 874
BspLI GGNNCC 2 cut(s) 204, 642
BspPI GGATC 4 cut(s) 61, 560, 814, 1159
BsrDI GCAATG 1 cut(s) 177
BsrI ACTGG 1 cut(s) 579
BssECI CCNNGG 2 cut(s) 18, 636
BssMI GATC 6 cut(s) 66, 565, 806, 1089, 1151, 1162
BssNAI GTATAC 1 cut(s) 713
BssT1I CCWWGG 1 cut(s) 18
Bst1107I GTATAC 1 cut(s) 713
Bst4CI ACNGT 2 cut(s) 317, 506
Bst6I CTCTTC 2 cut(s) 328, 1057
BstBAI YACGTR 1 cut(s) 659
BstC8I GCNNGC 3 cut(s) 96, 380, 1046
BstDEI CTNAG 3 cut(s) 129, 437, 1200
BstDSI CCRYGG 1 cut(s) 636
BstENI CCTNNNNNAGG 1 cut(s) 775
BstF5I GGATG 4 cut(s) 78, 236, 523, 757
BstFNI CGCG 1 cut(s) 638
BstKTI GATC 6 cut(s) 69, 568, 809, 1092, 1154, 1165
BstMAI GTCTC 1 cut(s) 130
BstMBI GATC 6 cut(s) 66, 565, 806, 1089, 1151, 1162
BstMWI GCNNNNNNNGC 4 cut(s) 42, 181, 384, 993
BstSNI TACGTA 1 cut(s) 659
BstUI CGCG 1 cut(s) 638
BstV1I GCAGC 2 cut(s) 48, 154
BstX2I RGATCY 2 cut(s) 806, 1089
BstYI RGATCY 2 cut(s) 806, 1089
BstZ17I GTATAC 1 cut(s) 713
BsuRI GGCC 2 cut(s) 815, 949
BtgI CCRYGG 1 cut(s) 636
BtsCI GGATG 4 cut(s) 78, 236, 523, 757
Cac8I GCNNGC 3 cut(s) 96, 380, 1046
CciI TCATGA 1 cut(s) 874
Cfr13I GGNCC 5 cut(s) 15, 52, 220, 413, 923
Cfr42I CCGCGG 1 cut(s) 639
Csp6I GTAC 1 cut(s) 502
CviAII CATG 3 cut(s) 217, 602, 875
CviQI GTAC 1 cut(s) 502
DdeI CTNAG 3 cut(s) 129, 437, 1200
DpnI GATC 6 cut(s) 68, 567, 808, 1091, 1153, 1164
DpnII GATC 6 cut(s) 66, 565, 806, 1089, 1151, 1162
EaeI YGGCCR 1 cut(s) 813
Eam1104I CTCTTC 2 cut(s) 328, 1057
EarI CTCTTC 2 cut(s) 328, 1057
Ecl136II GAGCTC 1 cut(s) 457
Eco105I TACGTA 1 cut(s) 659
Eco130I CCWWGG 1 cut(s) 18
Eco24I GRGCYC 1 cut(s) 459
Eco47I GGWCC 5 cut(s) 15, 52, 220, 413, 923
Eco53kI GAGCTC 1 cut(s) 457
Eco57I CTGAAG 4 cut(s) 164, 309, 816, 1078
EcoICRI GAGCTC 1 cut(s) 457
EcoNI CCTNNNNNAGG 1 cut(s) 775
EcoO109I RGGNCCY 1 cut(s) 52
EcoRI GAATTC 1 cut(s) 1075
EcoT14I CCWWGG 1 cut(s) 18
EcoT22I ATGCAT 2 cut(s) 177, 673
EcoT38I GRGCYC 1 cut(s) 459
ErhI CCWWGG 1 cut(s) 18
FaeI CATG 3 cut(s) 220, 605, 878
FaqI GGGAC 2 cut(s) 625, 1067
FatI CATG 3 cut(s) 216, 601, 874
FauI CCCGC 2 cut(s) 494, 643
FauNDI CATATG 3 cut(s) 679, 746, 1129
FblI GTMKAC 1 cut(s) 712
Fnu4HI GCNGC 3 cut(s) 34, 37, 168
FokI GGATG 4 cut(s) 65, 223, 530, 744
FriOI GRGCYC 1 cut(s) 459
Fsp4HI GCNGC 3 cut(s) 34, 37, 168
GluI GCNGC 3 cut(s) 34, 37, 168
HaeIII GGCC 2 cut(s) 815, 949
HapII CCGG 1 cut(s) 1104
Hin1II CATG 3 cut(s) 220, 605, 878
HincII GTYRAC 1 cut(s) 151
HindII GTYRAC 1 cut(s) 151
HinfI GANTC 2 cut(s) 395, 977
HpaII CCGG 1 cut(s) 1104
HphI GGTGA 1 cut(s) 904
Hpy166II GTNNAC 3 cut(s) 151, 656, 713
Hpy188I TCNGA 1 cut(s) 1156
Hpy188III TCNNGA 6 cut(s) 87, 249, 408, 452, 559, 875
Hpy8I GTNNAC 3 cut(s) 151, 656, 713
Hpy99I CGWCG 1 cut(s) 630
HpyAV CCTTC 1 cut(s) 1142
HpyCH4III ACNGT 2 cut(s) 317, 506
HpyCH4IV ACGT 1 cut(s) 658
HpyCH4V TGCA 7 cut(s) 11, 170, 175, 236, 429, 671, 677
HpyF10VI GCNNNNNNNGC 4 cut(s) 42, 181, 384, 993
HpyF3I CTNAG 3 cut(s) 129, 437, 1200
HpySE526I ACGT 1 cut(s) 658
Hsp92II CATG 3 cut(s) 220, 605, 878
KspI CCGCGG 1 cut(s) 639
Kzo9I GATC 6 cut(s) 66, 565, 806, 1089, 1151, 1162
LmnI GCTCC 4 cut(s) 202, 462, 984, 1014
Lsp1109I GCAGC 2 cut(s) 48, 154
LweI GCATC 4 cut(s) 184, 245, 508, 814
MaeII ACGT 1 cut(s) 658
MaeIII GTNAC 2 cut(s) 841, 1097
MalI GATC 6 cut(s) 68, 567, 808, 1091, 1153, 1164
MboI GATC 6 cut(s) 66, 565, 806, 1089, 1151, 1162
MboII GAAGA 4 cut(s) 170, 315, 1074, 1084
MfeI CAATTG 1 cut(s) 955
MflI RGATCY 2 cut(s) 806, 1089
MhlI GDGCHC 2 cut(s) 459, 1011
MlsI TGGCCA 1 cut(s) 815
MluCI AATT 5 cut(s) 475, 796, 955, 1075, 1135
MluNI TGGCCA 1 cut(s) 815
MlyI GAGTC 2 cut(s) 389, 971
MmeI TCCRAC 1 cut(s) 272
Mox20I TGGCCA 1 cut(s) 815
Mph1103I ATGCAT 2 cut(s) 177, 673
MscI TGGCCA 1 cut(s) 815
MseI TTAA 7 cut(s) 254, 390, 468, 474, 546, 786, 795
MslI CAYNNNNRTG 1 cut(s) 191
Msp20I TGGCCA 1 cut(s) 815
MspA1I CMGCKG 2 cut(s) 33, 638
MspI CCGG 1 cut(s) 1104
MunI CAATTG 1 cut(s) 955
Mva1269I GAATGC 1 cut(s) 673
MvnI CGCG 1 cut(s) 638
MwoI GCNNNNNNNGC 4 cut(s) 42, 181, 384, 993
NdeI CATATG 3 cut(s) 679, 746, 1129
NdeII GATC 6 cut(s) 66, 565, 806, 1089, 1151, 1162
NlaIII CATG 3 cut(s) 220, 605, 878
NlaIV GGNNCC 2 cut(s) 204, 642
NsiI ATGCAT 2 cut(s) 177, 673
PagI TCATGA 1 cut(s) 874
PctI GAATGC 1 cut(s) 673
PkrI GCNGC 3 cut(s) 35, 38, 169
PleI GAGTC 2 cut(s) 389, 971
PpsI GAGTC 2 cut(s) 389, 971
Ppu21I YACGTR 1 cut(s) 659
PpuMI RGGWCCY 1 cut(s) 52
PshBI ATTAAT 1 cut(s) 254
Psp124BI GAGCTC 1 cut(s) 459
Psp5II RGGWCCY 1 cut(s) 52
PspN4I GGNNCC 2 cut(s) 204, 642
PspPI GGNCC 5 cut(s) 15, 52, 220, 413, 923
PspPPI RGGWCCY 1 cut(s) 52
PsuI RGATCY 2 cut(s) 806, 1089
RsaI GTAC 1 cut(s) 503
RsaNI GTAC 1 cut(s) 502
RseI CAYNNNNRTG 1 cut(s) 191
SacI GAGCTC 1 cut(s) 459
SacII CCGCGG 1 cut(s) 639
SaqAI TTAA 7 cut(s) 254, 390, 468, 474, 546, 786, 795
SatI GCNGC 3 cut(s) 34, 37, 168
Sau3AI GATC 6 cut(s) 66, 565, 806, 1089, 1151, 1162
Sau96I GGNCC 5 cut(s) 15, 52, 220, 413, 923
SchI GAGTC 2 cut(s) 389, 971
SduI GDGCHC 2 cut(s) 459, 1011
SfaNI GCATC 4 cut(s) 184, 245, 508, 814
Sfr303I CCGCGG 1 cut(s) 639
SgrBI CCGCGG 1 cut(s) 639
SinI GGWCC 5 cut(s) 15, 52, 220, 413, 923
SmiMI CAYNNNNRTG 1 cut(s) 191
SnaBI TACGTA 1 cut(s) 659
Sse9I AATT 5 cut(s) 475, 796, 955, 1075, 1135
SsiI CCGC 4 cut(s) 33, 487, 636, 638
SspI AATATT 2 cut(s) 245, 550
SstI GAGCTC 1 cut(s) 459
StyI CCWWGG 1 cut(s) 18
TaaI ACNGT 2 cut(s) 317, 506
TaiI ACGT 1 cut(s) 661
TaqI TCGA 3 cut(s) 88, 265, 723
TasI AATT 5 cut(s) 475, 796, 955, 1075, 1135
TauI GCSGC 1 cut(s) 36
Tru1I TTAA 7 cut(s) 254, 390, 468, 474, 546, 786, 795
Tru9I TTAA 7 cut(s) 254, 390, 468, 474, 546, 786, 795
TseI GCWGC 2 cut(s) 36, 167
TspDTI ATGAA 4 cut(s) 573, 590, 733, 954
TspGWI ACGGA 1 cut(s) 1069
VpaK11BI GGWCC 5 cut(s) 15, 52, 220, 413, 923
VspI ATTAAT 1 cut(s) 254
XagI CCTNNNNNAGG 1 cut(s) 775
XapI RAATTY 1 cut(s) 1075
XbaI TCTAGA 1 cut(s) 451
XmiI GTMKAC 1 cut(s) 712
Zsp2I ATGCAT 2 cut(s) 177, 673
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.