RLG00000023505

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0000125
Physical Location & Seq
Forward (+)
24701412 .. 24705733
4322 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023505

Sequence Viewer

Length: 1884 bp
ATGCATGCTCAAGCATCAGATTCCATGCAAGCTTCATATTCAAATTGGATGACTCTAGATGACAAAGAGAGGGTCATTTTCCCAACTTTAACAGAGTTGTCCCTCCAAGTATACACTTATTGTATCGAGAATAAGATTGATATGGATGAGTTTTTCAAATACCAGAAAACTCATACTGAGCTAGAGATGGAGAGAAAAATTAGGAATGTATTGGGAATCGATGTCAAAATTGAAGGAAGTAGAAAGATTAGAGGAAAGTTTGAAAGCAAAATTATTTTTGATCTGATGCCAGAGGAGGATGGACGGAGTGATGGTGGAGATGGGAGTAGCGGAGGGAGTAGTGCACTTAGCTTTCACGTTGAAACTTACAAAATAAGACAAAGAGAGATTAGAGGAAAGTTTGAAAACAAAAATATTTTTGATCTGTTGCCAAAGGAGGATGGGCGGAGTGAGGGTGGAGATAGGAGTAGCGGAGGGAGTAGTGCATTTAGCCTTCACCCTTATGACTATGAAGAAAAAGAAGAAGCCTTTGCACCGAAACTGAAACTGAAAGGAGATAATTTACAGTTTCTGGGTCGGGAAAGTTTTCAAACATCGGCTCTTACCTTTCGGCCTGTAATTGAAGATTTGGAGATGCTGAGAACGAAACGAATGAGCCGGTGCAGCAACGATGCAAAGTTGATGGACCTACCGATTGATATCCTCATCAACATCCTTTTGAGACTGCCGGCAAAATCACTATGCTGCACACAGTGCGTCTGTAAAACCCTGCTTCACATAGTTGAAGCTCGTTCTTTTGCAACACTAGTGCATCTGCGCTTGCTTACTACTGCTTCTGATGCAGTTGCTGAAGTGCCTCAACTTTTGCTTCTTAATGTTGCTCAAGATGGTGACAATGGAAGCTTAATAACGATCTCTCCATCGCAGATATATGATGGCAATGTCTTGACAAAAAGCAGATATGCCATTGTCTCAAAGATTGCATCCTGCCGATATGATTACAATGTTGGTTTTGTTTTCTGCAACTTTTTCTTCTTTAAGGACAAAAAGTATGATCGAGGTCCATGCTTCATTTTCAACCCTCTCAGGGGAGAAGTTCTCATGCTCCCAACGAGCAAGGTCCAAGTTCCACCCTCTTGTAGAAGAAATATGCTGTTCATAGATTGGTACGGCATGGGTTTTGATGATATAACCAGCACCTACAAGATTGTTCGTGTTTCCGGAAATGAACGATGCTGTTTGGTGGCCCAAGTTTATATATTAGGCACCAGCTCATGGAAACGGATAAGCTCAGTTCCTCCATGTAATTTAAGCACAAAACAAATATCTGCATATGGAGACCTGCATTGGTTAATTAATCGCTCAAGTACTGGAGGACAAATCTGCATAGTTTCCTTTGACTTCAAGAAGGAGGAGTTCTATTTGACGCCTCATCCCGCATTAAGAAAGCCAGAATATTCTTTCTTGTCCCTTCTCTTTGTTAATTTGAGAGGATCTATGGCAATTGTTGATACTTCATCACATACACATATTGACATATGGGTTTTGAAGAGTTATGAGAAGAAAGAGTGGGTGCGAGCTTACAGCGTGAATCTCGAACTGCCTGCTGTAGAGCGTCCTTGGCATCTTGACCGGTGTGGTACTTGCATCGGTGAGTGGGAGAATGGCATATTTTTCGTAGAATTTTATGTTACTACTAACGCCTTCTTTGTGGATACAAGATGTGGTTCTGTGAAACGTGTATCACTTGGAGGTTCAGAGTATACGAGGATCTTCAGCTATCCTGGGAGTTTGATTTCATTAAAAGATTATGGCAATTTGATTGGAGCAGAAGCAGGTAACTGGAGGCCTGATTTCTCTGAAAAGTCTTGGCAAATTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

628

Amino Acids

71.38

Weight (kDa)

6.84

Isoelectric Point (pI)

41.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 227 - 263 5.2e-08 F-box domain
FBA_3 PF08268 297 - 538 8.4e-24 F-box associated beta propeller domain
FBA_1 PF07734 341 - 600 1.1e-17 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1350, 1826
AccB1I GGYRCC 1 cut(s) 1265
AccB7I CCANNNNNTGG 1 cut(s) 1275
AccI GTMKAC 2 cut(s) 111, 1763
AccIII TCCGGA 1 cut(s) 1220
AciI CCGC 4 cut(s) 330, 445, 471, 1437
AclWI GGATC 2 cut(s) 1501, 1778
AcsI RAATTY 1 cut(s) 1682
AcuI CTGAAG 2 cut(s) 870, 1759
AcyI GRCGYC 1 cut(s) 1427
AdeI CACNNNGTG 1 cut(s) 753
AfaI GTAC 3 cut(s) 1169, 1369, 1642
AfiI CCNNNNNNNGG 3 cut(s) 1087, 1088, 1275
AflIII ACRYGT 1 cut(s) 1738
AgeI ACCGGT 1 cut(s) 1632
AhlI ACTAGT 1 cut(s) 805
AjnI CCWGG 1 cut(s) 1783
AluBI AGCT 9 cut(s) 32, 181, 351, 788, 903, 1272, 1290, 1580, 1779
AluI AGCT 9 cut(s) 32, 181, 351, 788, 903, 1272, 1290, 1580, 1779
Alw21I GWGCWC 1 cut(s) 346
Alw26I GTCTC 3 cut(s) 715, 976, 1332
Alw44I GTGCAC 1 cut(s) 342
AlwI GGATC 2 cut(s) 1501, 1778
AlwNI CAGNNNCTG 2 cut(s) 571, 848
Aor13HI TCCGGA 1 cut(s) 1220
AoxI GGCC 3 cut(s) 611, 1245, 1847
ApaLI GTGCAC 1 cut(s) 342
ApeKI GCWGC 2 cut(s) 663, 744
ApoI RAATTY 1 cut(s) 1682
ArsI GACNNNNNNTTYG 2 cut(s) 57, 89
AseI ATTAAT 1 cut(s) 1356
AsiGI ACCGGT 1 cut(s) 1632
Asp700I GAANNNNTTC 1 cut(s) 585
AspLEI GCGC 1 cut(s) 819
AspS9I GGNCC 4 cut(s) 685, 1061, 1120, 1246
AsuHPI GGTGA 3 cut(s) 488, 902, 1664
AvaII GGWCC 3 cut(s) 685, 1061, 1120
BaeGI GKGCMC 1 cut(s) 346
BanI GGYRCC 1 cut(s) 1265
Bbv12I GWGCWC 1 cut(s) 346
BbvI GCAGC 2 cut(s) 675, 731
BccI CCATC 9 cut(s) 181, 293, 305, 314, 434, 676, 881, 928, 929
BceAI ACGGC 1 cut(s) 1186
BcgI CGANNNNNNTGC 6 cut(s) 1047, 1081, 1586, 1620, 1657, 1691
BciT130I CCWGG 1 cut(s) 1785
BciVI GTATCC 1 cut(s) 1708
BcoDI GTCTC 3 cut(s) 715, 976, 1332
BcuI ACTAGT 1 cut(s) 805
BfaI CTAG 3 cut(s) 56, 182, 806
BfmI CTRYAG 1 cut(s) 1608
BfuAI ACCTGC 2 cut(s) 1350, 1826
BfuI GTATCC 1 cut(s) 1708
BisI GCNGC 2 cut(s) 664, 745
BlsI GCNGC 2 cut(s) 665, 746
BmcAI AGTACT 1 cut(s) 1369
Bme1390I CCNGG 1 cut(s) 1785
Bme18I GGWCC 3 cut(s) 685, 1061, 1120
BmgT120I GGNCC 4 cut(s) 685, 1061, 1120, 1246
BmiI GGNNCC 1 cut(s) 1267
BmrFI CCNGG 1 cut(s) 1785
BplI GAGNNNNNCTC 2 cut(s) 1083, 1115
BpmI CTGGAG 2 cut(s) 1392, 1864
BpuEI CTTGAG 2 cut(s) 867, 1348
Bsa29I ATCGAT 1 cut(s) 219
BsaBI GATNNNNATC 1 cut(s) 698
BsaHI GRCGYC 1 cut(s) 1427
BsaI GGTCTC 1 cut(s) 1332
BsaJI CCNNGG 2 cut(s) 1619, 1784
BsaWI WCCGGW 2 cut(s) 1220, 1632
BsaXI ACNNNNNCTCC 6 cut(s) 298, 328, 439, 469, 901, 931
Bsc4I CCNNNNNNNGG 3 cut(s) 1087, 1088, 1275
Bse118I RCCGGY 3 cut(s) 657, 727, 1632
Bse1I ACTGG 2 cut(s) 1375, 1847
Bse3DI GCAATG 1 cut(s) 946
Bse8I GATNNNNATC 1 cut(s) 698
BseAI TCCGGA 1 cut(s) 1220
BseBI CCWGG 1 cut(s) 1785
BseCI ATCGAT 1 cut(s) 219
BseDI CCNNGG 2 cut(s) 1619, 1784
BseGI GGATG 7 cut(s) 54, 151, 304, 445, 711, 983, 1432
BseJI GATNNNNATC 1 cut(s) 698
BseLI CCNNNNNNNGG 3 cut(s) 1087, 1088, 1275
BseMI GCAATG 1 cut(s) 946
BseMII CTCAG 4 cut(s) 168, 629, 1099, 1305
BseNI ACTGG 2 cut(s) 1375, 1847
BseRI GAGGAG 2 cut(s) 308, 1427
BseSI GKGCMC 1 cut(s) 346
BseXI GCAGC 2 cut(s) 675, 731
BsgI GTGCAG 2 cut(s) 682, 730
BshFI GGCC 3 cut(s) 613, 1247, 1849
BshNI GGYRCC 1 cut(s) 1265
BshTI ACCGGT 1 cut(s) 1632
BshVI ATCGAT 1 cut(s) 219
BsiHKAI GWGCWC 1 cut(s) 346
BsiSI CCGG 4 cut(s) 658, 728, 1221, 1633
BslFI GGGAC 2 cut(s) 85, 1453
BslI CCNNNNNNNGG 3 cut(s) 1087, 1088, 1275
BsmAI GTCTC 3 cut(s) 715, 976, 1332
BsmFI GGGAC 2 cut(s) 85, 1453
BsnI GGCC 3 cut(s) 613, 1247, 1849
Bso31I GGTCTC 1 cut(s) 1332
Bsp1286I GDGCHC 1 cut(s) 346
Bsp13I TCCGGA 1 cut(s) 1220
Bsp143I GATC 6 cut(s) 280, 421, 912, 1054, 1493, 1770
BspACI CCGC 4 cut(s) 330, 445, 471, 1437
BspANI GGCC 3 cut(s) 613, 1247, 1849
BspCNI CTCAG 4 cut(s) 169, 630, 1098, 1304
BspDI ATCGAT 1 cut(s) 219
BspEI TCCGGA 1 cut(s) 1220
BspLI GGNNCC 1 cut(s) 1267
BspMI ACCTGC 2 cut(s) 1350, 1826
BspPI GGATC 2 cut(s) 1501, 1778
BspT107I GGYRCC 1 cut(s) 1265
BspTNI GGTCTC 1 cut(s) 1332
BsrDI GCAATG 1 cut(s) 946
BsrFI RCCGGY 3 cut(s) 657, 727, 1632
BsrI ACTGG 2 cut(s) 1375, 1847
BssAI RCCGGY 3 cut(s) 657, 727, 1632
BssECI CCNNGG 2 cut(s) 1619, 1784
BssMI GATC 6 cut(s) 280, 421, 912, 1054, 1493, 1770
BssNAI GTATAC 2 cut(s) 112, 1764
BssNI GRCGYC 1 cut(s) 1427
BssT1I CCWWGG 1 cut(s) 1619
Bst1107I GTATAC 2 cut(s) 112, 1764
Bst2UI CCWGG 1 cut(s) 1785
Bst4CI ACNGT 2 cut(s) 567, 753
Bst6I CTCTTC 1 cut(s) 1544
BstACI GRCGYC 1 cut(s) 1427
BstAPI GCANNNNNTGC 1 cut(s) 753
BstC8I GCNNGC 6 cut(s) 6, 30, 729, 821, 1578, 1605
BstDEI CTNAG 5 cut(s) 177, 347, 638, 1085, 1291
BstF5I GGATG 7 cut(s) 54, 151, 304, 445, 711, 983, 1432
BstHHI GCGC 1 cut(s) 819
BstKTI GATC 6 cut(s) 283, 424, 915, 1057, 1496, 1773
BstMAI GTCTC 3 cut(s) 715, 976, 1332
BstMBI GATC 6 cut(s) 280, 421, 912, 1054, 1493, 1770
BstMWI GCNNNNNNNGC 4 cut(s) 663, 753, 839, 1621
BstNI CCWGG 1 cut(s) 1785
BstNSI RCATGY 1 cut(s) 8
BstSCI CCNGG 1 cut(s) 1783
BstSFI CTRYAG 1 cut(s) 1608
BstSLI GKGCMC 1 cut(s) 346
BstV1I GCAGC 2 cut(s) 675, 731
BstX2I RGATCY 2 cut(s) 1493, 1770
BstYI RGATCY 2 cut(s) 1493, 1770
BstZ17I GTATAC 2 cut(s) 112, 1764
Bsu15I ATCGAT 1 cut(s) 219
BsuI GTATCC 1 cut(s) 1708
BsuRI GGCC 3 cut(s) 613, 1247, 1849
BsuTUI ATCGAT 1 cut(s) 219
BtgZI GCGATG 1 cut(s) 906
BtsCI GGATG 7 cut(s) 54, 151, 304, 445, 711, 983, 1432
BtsIMutI CAGTG 1 cut(s) 758
BveI ACCTGC 2 cut(s) 1350, 1826
Cac8I GCNNGC 6 cut(s) 6, 30, 729, 821, 1578, 1605
CaiI CAGNNNCTG 2 cut(s) 571, 848
CfoI GCGC 1 cut(s) 819
Cfr10I RCCGGY 3 cut(s) 657, 727, 1632
Cfr13I GGNCC 4 cut(s) 685, 1061, 1120, 1246
ClaI ATCGAT 1 cut(s) 219
CseI GACGC 3 cut(s) 745, 1435, 1604
Csp6I GTAC 3 cut(s) 1168, 1368, 1641
CspAI ACCGGT 1 cut(s) 1632
CviAII CATG 7 cut(s) 5, 25, 1065, 1102, 1174, 1275, 1302
CviQI GTAC 3 cut(s) 1168, 1368, 1641
DdeI CTNAG 5 cut(s) 177, 347, 638, 1085, 1291
DpnI GATC 6 cut(s) 282, 423, 914, 1056, 1495, 1772
DpnII GATC 6 cut(s) 280, 421, 912, 1054, 1493, 1770
DraIII CACNNNGTG 1 cut(s) 753
Eam1104I CTCTTC 1 cut(s) 1544
EarI CTCTTC 1 cut(s) 1544
EciI GGCGGA 1 cut(s) 460
Eco130I CCWWGG 1 cut(s) 1619
Eco147I AGGCCT 1 cut(s) 1849
Eco31I GGTCTC 1 cut(s) 1332
Eco32I GATATC 1 cut(s) 700
Eco47I GGWCC 3 cut(s) 685, 1061, 1120
Eco57I CTGAAG 2 cut(s) 870, 1759
EcoRII CCWGG 1 cut(s) 1783
EcoRV GATATC 1 cut(s) 700
EcoT14I CCWWGG 1 cut(s) 1619
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 1619
FaeI CATG 7 cut(s) 8, 28, 1068, 1105, 1177, 1278, 1305
FaqI GGGAC 2 cut(s) 85, 1453
FatI CATG 7 cut(s) 4, 24, 1064, 1101, 1173, 1274, 1301
FauI CCCGC 1 cut(s) 1444
FauNDI CATATG 2 cut(s) 1333, 1538
FblI GTMKAC 2 cut(s) 111, 1763
Fnu4HI GCNGC 2 cut(s) 664, 745
FokI GGATG 7 cut(s) 61, 158, 311, 452, 698, 970, 1419
Fsp4HI GCNGC 2 cut(s) 664, 745
FspBI CTAG 3 cut(s) 56, 182, 806
GlaI GCGC 1 cut(s) 818
GluI GCNGC 2 cut(s) 664, 745
GsuI CTGGAG 2 cut(s) 1392, 1864
HaeIII GGCC 3 cut(s) 613, 1247, 1849
HapII CCGG 4 cut(s) 658, 728, 1221, 1633
HgaI GACGC 3 cut(s) 745, 1435, 1604
HhaI GCGC 1 cut(s) 819
Hin1I GRCGYC 1 cut(s) 1427
Hin1II CATG 7 cut(s) 8, 28, 1068, 1105, 1177, 1278, 1305
Hin6I GCGC 1 cut(s) 817
HinP1I GCGC 1 cut(s) 817
HindIII AAGCTT 2 cut(s) 30, 901
HinfI GANTC 4 cut(s) 20, 52, 216, 1591
HpaII CCGG 4 cut(s) 658, 728, 1221, 1633
HphI GGTGA 3 cut(s) 488, 902, 1664
Hpy166II GTNNAC 3 cut(s) 112, 344, 1764
Hpy188I TCNGA 5 cut(s) 19, 285, 838, 1759, 1861
Hpy188III TCNNGA 9 cut(s) 56, 127, 578, 884, 946, 1221, 1405, 1595, 1628
Hpy8I GTNNAC 3 cut(s) 112, 344, 1764
HpyAV CCTTC 5 cut(s) 227, 503, 1402, 1481, 1714
HpyCH4III ACNGT 2 cut(s) 567, 753
HpyCH4IV ACGT 2 cut(s) 357, 1738
HpyF10VI GCNNNNNNNGC 4 cut(s) 663, 753, 839, 1621
HpyF3I CTNAG 5 cut(s) 177, 347, 638, 1085, 1291
HpySE526I ACGT 2 cut(s) 357, 1738
Hsp92I GRCGYC 1 cut(s) 1427
Hsp92II CATG 7 cut(s) 8, 28, 1068, 1105, 1177, 1278, 1305
HspAI GCGC 1 cut(s) 817
Kpn2I TCCGGA 1 cut(s) 1220
KroI GCCGGC 1 cut(s) 727
KroNI GCCGGC 1 cut(s) 729
Kzo9I GATC 6 cut(s) 280, 421, 912, 1054, 1493, 1770
LmnI GCTCC 2 cut(s) 1110, 1826
Lsp1109I GCAGC 2 cut(s) 675, 731
MaeI CTAG 3 cut(s) 56, 182, 806
MaeII ACGT 2 cut(s) 357, 1738
MaeIII GTNAC 3 cut(s) 890, 1690, 1838
MalI GATC 6 cut(s) 282, 423, 914, 1056, 1495, 1772
MboI GATC 6 cut(s) 280, 421, 912, 1054, 1493, 1770
MboII GAAGA 8 cut(s) 524, 533, 635, 1024, 1155, 1561, 1573, 1765
MfeI CAATTG 1 cut(s) 1503
MflI RGATCY 2 cut(s) 1493, 1770
MhlI GDGCHC 1 cut(s) 346
MlyI GAGTC 1 cut(s) 46
Mph1103I ATGCAT 1 cut(s) 6
MroI TCCGGA 1 cut(s) 1220
MroNI GCCGGC 1 cut(s) 727
MroXI GAANNNNTTC 1 cut(s) 585
MslI CAYNNNNRTG 1 cut(s) 501
MspI CCGG 4 cut(s) 658, 728, 1221, 1633
MspR9I CCNGG 1 cut(s) 1785
MunI CAATTG 1 cut(s) 1503
MvaI CCWGG 1 cut(s) 1785
MwoI GCNNNNNNNGC 4 cut(s) 663, 753, 839, 1621
NaeI GCCGGC 1 cut(s) 729
NdeI CATATG 2 cut(s) 1333, 1538
NdeII GATC 6 cut(s) 280, 421, 912, 1054, 1493, 1770
NgoMIV GCCGGC 1 cut(s) 727
NlaIII CATG 7 cut(s) 8, 28, 1068, 1105, 1177, 1278, 1305
NlaIV GGNNCC 1 cut(s) 1267
NmuCI GTSAC 1 cut(s) 890
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 8
PacI TTAATTAA 1 cut(s) 1356
PaeI GCATGC 1 cut(s) 8
PceI AGGCCT 1 cut(s) 1849
PdiI GCCGGC 1 cut(s) 729
PdmI GAANNNNTTC 1 cut(s) 585
PfeI GAWTC 3 cut(s) 20, 216, 1591
PflMI CCANNNNNTGG 1 cut(s) 1275
PinAI ACCGGT 1 cut(s) 1632
PkrI GCNGC 2 cut(s) 665, 746
PleI GAGTC 1 cut(s) 46
PpsI GAGTC 1 cut(s) 46
PshBI ATTAAT 1 cut(s) 1356
Psp6I CCWGG 1 cut(s) 1783
PspGI CCWGG 1 cut(s) 1783
PspN4I GGNNCC 1 cut(s) 1267
PspPI GGNCC 4 cut(s) 685, 1061, 1120, 1246
PstNI CAGNNNCTG 2 cut(s) 571, 848
PsuI RGATCY 2 cut(s) 1493, 1770
RsaI GTAC 3 cut(s) 1169, 1369, 1642
RsaNI GTAC 3 cut(s) 1168, 1368, 1641
RseI CAYNNNNRTG 1 cut(s) 501
SatI GCNGC 2 cut(s) 664, 745
Sau3AI GATC 6 cut(s) 280, 421, 912, 1054, 1493, 1770
Sau96I GGNCC 4 cut(s) 685, 1061, 1120, 1246
ScaI AGTACT 1 cut(s) 1369
SchI GAGTC 1 cut(s) 46
ScrFI CCNGG 1 cut(s) 1785
SduI GDGCHC 1 cut(s) 346
SfcI CTRYAG 1 cut(s) 1608
SinI GGWCC 3 cut(s) 685, 1061, 1120
SmiMI CAYNNNNRTG 1 cut(s) 501
SmlI CTYRAG 3 cut(s) 9, 882, 1363
SmoI CTYRAG 3 cut(s) 9, 882, 1363
SpeI ACTAGT 1 cut(s) 805
SphI GCATGC 1 cut(s) 8
SseBI AGGCCT 1 cut(s) 1849
SsiI CCGC 4 cut(s) 330, 445, 471, 1437
SspI AATATT 2 cut(s) 415, 1457
SspMI CTAG 3 cut(s) 56, 182, 806
StuI AGGCCT 1 cut(s) 1849
StyD4I CCNGG 1 cut(s) 1783
StyI CCWWGG 1 cut(s) 1619
TaaI ACNGT 2 cut(s) 567, 753
TaiI ACGT 2 cut(s) 360, 1741
TaqI TCGA 4 cut(s) 126, 219, 1057, 1596
TatI WGTACW 1 cut(s) 1367
TfiI GAWTC 3 cut(s) 20, 216, 1591
TscAI CASTG 1 cut(s) 758
TseFI GTSAC 1 cut(s) 890
TseI GCWGC 2 cut(s) 663, 744
Tsp45I GTSAC 1 cut(s) 890
TspDTI ATGAA 7 cut(s) 24, 525, 1060, 1147, 1242, 1506, 1788
TspGWI ACGGA 2 cut(s) 319, 1297
TspRI CASTG 1 cut(s) 758
Van91I CCANNNNNTGG 1 cut(s) 1275
VneI GTGCAC 1 cut(s) 342
VpaK11BI GGWCC 3 cut(s) 685, 1061, 1120
VspI ATTAAT 1 cut(s) 1356
XapI RAATTY 1 cut(s) 1682
XbaI TCTAGA 1 cut(s) 55
XceI RCATGY 1 cut(s) 8
XmiI GTMKAC 2 cut(s) 111, 1763
XmnI GAANNNNTTC 1 cut(s) 585
XspI CTAG 3 cut(s) 56, 182, 806
ZrmI AGTACT 1 cut(s) 1369
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.