Rh2DG008500

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000125
Physical Location & Seq
Reverse (-)
498783 .. 500189
1407 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG008500.1

Sequence Viewer

Length: 1314 bp
ATGAACTTGCGGCTTCTGGTTTGGAACAATATGAAGAGCCACAGAAAGAGGCCCTGCAATACCATTAAGTTGAATTTGATGGAGCTTCCCATGGAAATCCTGGTCGAAATCTTGAAGAGAGTGCCTGCAAAGTCAGTGTGTCAAATCCGATGCGTCTCTAAGTCCTTGCTAAGCATAGTCGACTCCCCCTCTTTTGTCACGCTGGACTCGCATTTTCTACTTAATCCTGATTCTCATGGAGCGGGTAATACCCCTCAACTTATCCTGTGGTATGGCCGACCATTTTACGACCTACCGACCTTGCATTCCCTTCATTACGACCTTTCCAATGCCCAAGGTGCTCAAGTTAATGCAAGAGATATTTTGCACTCATCCAATCCCGCCGAGTACAGTCTATATTTTGTTTTCTGCAACTTGTTTTGCATCAGACGCGATCCTGCACTCAGCTTCTTGATCAATCCTTTTCAGGGAGAAGTTCTAAGGCTCCCACCCAGTCAGCAAGTTTGTGGTCCATATTCGAAAGTGCAGTTTGTTTGGACTGGTATGGGATTTGATAGTATAACCAATATACAAGATTCTTCGTGTTACAGAGATTGGCTTTTCTACAACATTTGTATCCCAAGTGCTTGTACTCGGCACAAGCGAATGGCGGCAGGAACAACCGATATACTTTCTTTTGACTTCAAGAAAGAAGAGTTCTTTTGGACTCCCACTCCCTACAGATTCCCATATCCGACCTGGAAATTACACTTGATTAATTTTAGAGGATCTATGGCCATCGTGGATGCTTCATCAGGTATGAATATTGAGATATGGGTGATGAAAGATTACAATGAAAAACAGTGGATACTCGATTATTCCATCAATATCCACATGCTTGAATTAGATCCTGAATTTGAGTTTATTGGGGCTGTTTGTTGTGAATGGGAGCATGGCATACTTTTCATAGATGAACCGGCCACAATAACATTGTTTTTGGATCTAAGACAACCTGTTGTCACCAGGAATCTTTTCAAACGTCCAAATAAGGAGTGTGATTTGGTGTCTGAGCGAATCATGAGTCTTAATGGGAGCTTGTTTTCCCTAAAAAATTATGCAAATTTGGTCGAAGCAGAAGAACCGGCTACTTATAGCAATTGGACTGAAGGAGAAGCAAGCGGGAATAATTTCTTCTATCTGAAGGACAGAGGCTTTAGTTTTTGGACCGCGGGCCAAATGATGACCCTAACCTGGCCTGGAGAGTCTCTTATTCTATATAGAAAACTTGTCCAGCGGCCCCGACGTATAATCTGGTGCTCTCTTTATGTAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

437

Amino Acids

50.7

Weight (kDa)

6.79

Isoelectric Point (pI)

46.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 27 - 65 1.3e-09 F-box domain
FBA_3 PF08268 221 - 285 6.3e-08 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 242
AccI GTMKAC 1 cut(s) 180
AccII CGCG 2 cut(s) 432, 1208
AciI CCGC 8 cut(s) 10, 242, 381, 650, 1158, 1206, 1208, 1273
AclWI GGATC 4 cut(s) 428, 775, 881, 987
AcoI YGGCCR 3 cut(s) 274, 774, 957
AcsI RAATTY 3 cut(s) 73, 893, 1099
AcuI CTGAAG 2 cut(s) 1164, 1199
AfaI GTAC 2 cut(s) 389, 631
AfiI CCNNNNNNNGG 2 cut(s) 467, 1230
AgsI TTSAA 5 cut(s) 73, 115, 685, 881, 1015
AjnI CCWGG 5 cut(s) 99, 737, 1001, 1229, 1234
AluBI AGCT 3 cut(s) 85, 447, 1074
AluI AGCT 3 cut(s) 85, 447, 1074
Alw21I GWGCWC 2 cut(s) 343, 1298
Alw26I GTCTC 2 cut(s) 160, 1248
AlwI GGATC 4 cut(s) 428, 775, 881, 987
AoxI GGCC 7 cut(s) 50, 274, 774, 957, 1210, 1232, 1274
ApoI RAATTY 3 cut(s) 73, 893, 1099
ArsI GACNNNNNNTTYG 2 cut(s) 1045, 1077
AseI ATTAAT 1 cut(s) 756
Asp700I GAANNNNTTC 2 cut(s) 1010, 1166
AspS9I GGNCC 5 cut(s) 51, 509, 1203, 1210, 1275
AsuHPI GGTGA 2 cut(s) 829, 991
AsuII TTCGAA 1 cut(s) 518
AvaII GGWCC 2 cut(s) 509, 1203
BaeI ACNNNNGTAYC 2 cut(s) 598, 631
BalI TGGCCA 1 cut(s) 776
Bbv12I GWGCWC 2 cut(s) 343, 1298
BccI CCATC 3 cut(s) 73, 785, 869
BciT130I CCWGG 5 cut(s) 101, 739, 1003, 1231, 1236
BciVI GTATCC 2 cut(s) 626, 840
BclI TGATCA 1 cut(s) 453
BcoDI GTCTC 2 cut(s) 160, 1248
BfmI CTRYAG 1 cut(s) 718
BfuI GTATCC 2 cut(s) 626, 840
BisI GCNGC 3 cut(s) 11, 651, 1274
BlpI GCTNAGC 1 cut(s) 170
BlsI GCNGC 3 cut(s) 12, 652, 1275
Bme1390I CCNGG 5 cut(s) 101, 739, 1003, 1231, 1236
Bme18I GGWCC 2 cut(s) 509, 1203
BmgT120I GGNCC 5 cut(s) 51, 509, 1203, 1210, 1275
BmiI GGNNCC 2 cut(s) 485, 1277
BmrFI CCNGG 5 cut(s) 101, 739, 1003, 1231, 1236
BmrI ACTGGG 1 cut(s) 486
BmsI GCATC 3 cut(s) 140, 432, 775
BmuI ACTGGG 1 cut(s) 486
BpmI CTGGAG 1 cut(s) 1257
Bpu1102I GCTNAGC 1 cut(s) 170
Bpu14I TTCGAA 1 cut(s) 518
BpuEI CTTGAG 1 cut(s) 327
BsaJI CCNNGG 3 cut(s) 90, 334, 1206
BsaXI ACNNNNNCTCC 2 cut(s) 697, 727
Bsc4I CCNNNNNNNGG 2 cut(s) 467, 1230
Bse118I RCCGGY 2 cut(s) 955, 1120
Bse1I ACTGG 2 cut(s) 492, 544
BseBI CCWGG 5 cut(s) 101, 739, 1003, 1231, 1236
BseDI CCNNGG 3 cut(s) 90, 334, 1206
BseGI GGATG 2 cut(s) 371, 790
BseLI CCNNNNNNNGG 2 cut(s) 467, 1230
BseMII CTCAG 2 cut(s) 457, 1038
BseNI ACTGG 2 cut(s) 492, 544
BsgI GTGCAG 2 cut(s) 423, 545
Bsh1236I CGCG 2 cut(s) 432, 1208
BshFI GGCC 7 cut(s) 52, 276, 776, 959, 1212, 1234, 1276
BsiHKAI GWGCWC 2 cut(s) 343, 1298
BsiSI CCGG 2 cut(s) 956, 1121
BslI CCNNNNNNNGG 2 cut(s) 467, 1230
BsmAI GTCTC 2 cut(s) 160, 1248
BsmBI CGTCTC 1 cut(s) 160
BsmI GAATGC 1 cut(s) 304
BsnI GGCC 7 cut(s) 52, 276, 776, 959, 1212, 1234, 1276
Bsp119I TTCGAA 1 cut(s) 518
Bsp1286I GDGCHC 2 cut(s) 343, 1298
Bsp143I GATC 5 cut(s) 433, 453, 767, 886, 979
Bsp1720I GCTNAGC 1 cut(s) 170
Bsp19I CCATGG 1 cut(s) 90
BspACI CCGC 8 cut(s) 10, 242, 381, 650, 1158, 1206, 1208, 1273
BspANI GGCC 7 cut(s) 52, 276, 776, 959, 1212, 1234, 1276
BspCNI CTCAG 2 cut(s) 456, 1039
BspFNI CGCG 2 cut(s) 432, 1208
BspHI TCATGA 1 cut(s) 1056
BspLI GGNNCC 2 cut(s) 485, 1277
BspPI GGATC 4 cut(s) 428, 775, 881, 987
BspQI GCTCTTC 1 cut(s) 29
BspT104I TTCGAA 1 cut(s) 518
BsrBI CCGCTC 1 cut(s) 242
BsrFI RCCGGY 2 cut(s) 955, 1120
BsrI ACTGG 2 cut(s) 492, 544
BssAI RCCGGY 2 cut(s) 955, 1120
BssECI CCNNGG 3 cut(s) 90, 334, 1206
BssMI GATC 5 cut(s) 433, 453, 767, 886, 979
BssT1I CCWWGG 2 cut(s) 90, 334
Bst2UI CCWGG 5 cut(s) 101, 739, 1003, 1231, 1236
Bst4CI ACNGT 2 cut(s) 392, 843
Bst6I CTCTTC 3 cut(s) 29, 110, 687
BstBI TTCGAA 1 cut(s) 518
BstC8I GCNNGC 3 cut(s) 126, 1156, 1210
BstDEI CTNAG 6 cut(s) 159, 170, 443, 479, 983, 1047
BstDSI CCRYGG 2 cut(s) 90, 1206
BstF5I GGATG 2 cut(s) 371, 790
BstFNI CGCG 2 cut(s) 432, 1208
BstKTI GATC 5 cut(s) 436, 456, 770, 889, 982
BstMAI GTCTC 2 cut(s) 160, 1248
BstMBI GATC 5 cut(s) 433, 453, 767, 886, 979
BstMWI GCNNNNNNNGC 3 cut(s) 208, 338, 429
BstNI CCWGG 5 cut(s) 101, 739, 1003, 1231, 1236
BstNSI RCATGY 1 cut(s) 877
BstSCI CCNGG 5 cut(s) 99, 737, 1001, 1229, 1234
BstSFI CTRYAG 1 cut(s) 718
BstUI CGCG 2 cut(s) 432, 1208
BstX2I RGATCY 3 cut(s) 767, 886, 979
BstYI RGATCY 3 cut(s) 767, 886, 979
BsuI GTATCC 2 cut(s) 626, 840
BsuRI GGCC 7 cut(s) 52, 276, 776, 959, 1212, 1234, 1276
BtgI CCRYGG 2 cut(s) 90, 1206
BtsCI GGATG 2 cut(s) 371, 790
BtsIMutI CAGTG 2 cut(s) 141, 848
Cac8I GCNNGC 3 cut(s) 126, 1156, 1210
CciI TCATGA 1 cut(s) 1056
Cfr10I RCCGGY 2 cut(s) 955, 1120
Cfr13I GGNCC 5 cut(s) 51, 509, 1203, 1210, 1275
Cfr42I CCGCGG 1 cut(s) 1209
CseI GACGC 2 cut(s) 142, 438
Csp6I GTAC 2 cut(s) 388, 630
CviAII CATG 5 cut(s) 91, 236, 874, 932, 1057
CviQI GTAC 2 cut(s) 388, 630
DdeI CTNAG 6 cut(s) 159, 170, 443, 479, 983, 1047
DpnI GATC 5 cut(s) 435, 455, 769, 888, 981
DpnII GATC 5 cut(s) 433, 453, 767, 886, 979
EaeI YGGCCR 3 cut(s) 274, 774, 957
Eam1104I CTCTTC 3 cut(s) 29, 110, 687
EarI CTCTTC 3 cut(s) 29, 110, 687
Eco130I CCWWGG 2 cut(s) 90, 334
Eco47I GGWCC 2 cut(s) 509, 1203
Eco57I CTGAAG 2 cut(s) 1164, 1199
EcoO109I RGGNCCY 1 cut(s) 51
EcoRII CCWGG 5 cut(s) 99, 737, 1001, 1229, 1234
EcoT14I CCWWGG 2 cut(s) 90, 334
ErhI CCWWGG 2 cut(s) 90, 334
Esp3I CGTCTC 1 cut(s) 160
FaeI CATG 5 cut(s) 94, 239, 877, 935, 1060
FatI CATG 5 cut(s) 90, 235, 873, 931, 1056
FauI CCCGC 4 cut(s) 235, 388, 1151, 1201
FbaI TGATCA 1 cut(s) 453
FblI GTMKAC 1 cut(s) 180
Fnu4HI GCNGC 3 cut(s) 11, 651, 1274
FokI GGATG 2 cut(s) 358, 797
Fsp4HI GCNGC 3 cut(s) 11, 651, 1274
GluI GCNGC 3 cut(s) 11, 651, 1274
GsuI CTGGAG 1 cut(s) 1257
HaeIII GGCC 7 cut(s) 52, 276, 776, 959, 1212, 1234, 1276
HapII CCGG 2 cut(s) 956, 1121
HgaI GACGC 2 cut(s) 142, 438
Hin1II CATG 5 cut(s) 94, 239, 877, 935, 1060
HincII GTYRAC 1 cut(s) 181
HindII GTYRAC 1 cut(s) 181
HpaII CCGG 2 cut(s) 956, 1121
HphI GGTGA 2 cut(s) 829, 991
Hpy166II GTNNAC 1 cut(s) 181
Hpy188I TCNGA 5 cut(s) 149, 428, 735, 1048, 1179
Hpy188III TCNNGA 6 cut(s) 112, 227, 451, 685, 890, 1057
Hpy8I GTNNAC 1 cut(s) 181
Hpy99I CGWCG 1 cut(s) 1284
HpyAV CCTTC 3 cut(s) 320, 1139, 1174
HpyCH4III ACNGT 2 cut(s) 392, 843
HpyCH4IV ACGT 2 cut(s) 1018, 1282
HpyF10VI GCNNNNNNNGC 3 cut(s) 208, 338, 429
HpyF3I CTNAG 6 cut(s) 159, 170, 443, 479, 983, 1047
HpySE526I ACGT 2 cut(s) 1018, 1282
Hsp92II CATG 5 cut(s) 94, 239, 877, 935, 1060
Ksp22I TGATCA 1 cut(s) 453
KspI CCGCGG 1 cut(s) 1209
Kzo9I GATC 5 cut(s) 433, 453, 767, 886, 979
LguI GCTCTTC 1 cut(s) 29
LmnI GCTCC 5 cut(s) 82, 239, 489, 928, 1071
LweI GCATC 3 cut(s) 140, 432, 775
MaeII ACGT 2 cut(s) 1018, 1282
MaeIII GTNAC 3 cut(s) 196, 584, 997
MalI GATC 5 cut(s) 435, 455, 769, 888, 981
MbiI CCGCTC 1 cut(s) 242
MboI GATC 5 cut(s) 433, 453, 767, 886, 979
MboII GAAGA 6 cut(s) 46, 127, 570, 704, 1127, 1162
MfeI CAATTG 1 cut(s) 1135
MflI RGATCY 3 cut(s) 767, 886, 979
MhlI GDGCHC 2 cut(s) 343, 1298
MlsI TGGCCA 1 cut(s) 776
MluCI AATT 9 cut(s) 73, 743, 757, 881, 893, 1090, 1099, 1135, 1165
MluNI TGGCCA 1 cut(s) 776
MlyI GAGTC 5 cut(s) 176, 200, 700, 1069, 1250
MmeI TCCRAC 1 cut(s) 758
MnlI CCTC 5 cut(s) 42, 199, 264, 758, 1181
Mox20I TGGCCA 1 cut(s) 776
MroXI GAANNNNTTC 2 cut(s) 1010, 1166
MscI TGGCCA 1 cut(s) 776
MseI TTAA 5 cut(s) 66, 222, 348, 756, 1065
Msp20I TGGCCA 1 cut(s) 776
MspA1I CMGCKG 2 cut(s) 1208, 1273
MspI CCGG 2 cut(s) 956, 1121
MspR9I CCNGG 5 cut(s) 101, 739, 1003, 1231, 1236
MunI CAATTG 1 cut(s) 1135
Mva1269I GAATGC 1 cut(s) 304
MvaI CCWGG 5 cut(s) 101, 739, 1003, 1231, 1236
MvnI CGCG 2 cut(s) 432, 1208
MwoI GCNNNNNNNGC 3 cut(s) 208, 338, 429
NcoI CCATGG 1 cut(s) 90
NdeII GATC 5 cut(s) 433, 453, 767, 886, 979
NlaIII CATG 5 cut(s) 94, 239, 877, 935, 1060
NlaIV GGNNCC 2 cut(s) 485, 1277
NmeAIII GCCGAG 2 cut(s) 409, 613
NmuCI GTSAC 2 cut(s) 196, 997
NspI RCATGY 1 cut(s) 877
NspV TTCGAA 1 cut(s) 518
PagI TCATGA 1 cut(s) 1056
PciSI GCTCTTC 1 cut(s) 29
PcsI WCGNNNNNNNCGW 1 cut(s) 640
PctI GAATGC 1 cut(s) 304
PdmI GAANNNNTTC 2 cut(s) 1010, 1166
PfeI GAWTC 5 cut(s) 230, 575, 723, 1006, 1053
PkrI GCNGC 3 cut(s) 12, 652, 1275
PleI GAGTC 5 cut(s) 176, 200, 700, 1068, 1249
PpsI GAGTC 5 cut(s) 176, 200, 700, 1068, 1249
PshBI ATTAAT 1 cut(s) 756
Psp6I CCWGG 5 cut(s) 99, 737, 1001, 1229, 1234
PspGI CCWGG 5 cut(s) 99, 737, 1001, 1229, 1234
PspN4I GGNNCC 2 cut(s) 485, 1277
PspPI GGNCC 5 cut(s) 51, 509, 1203, 1210, 1275
PsuI RGATCY 3 cut(s) 767, 886, 979
RsaI GTAC 2 cut(s) 389, 631
RsaNI GTAC 2 cut(s) 388, 630
SacII CCGCGG 1 cut(s) 1209
SalI GTCGAC 1 cut(s) 179
SapI GCTCTTC 1 cut(s) 29
SaqAI TTAA 5 cut(s) 66, 222, 348, 756, 1065
SatI GCNGC 3 cut(s) 11, 651, 1274
Sau3AI GATC 5 cut(s) 433, 453, 767, 886, 979
Sau96I GGNCC 5 cut(s) 51, 509, 1203, 1210, 1275
SchI GAGTC 5 cut(s) 176, 200, 700, 1069, 1250
ScrFI CCNGG 5 cut(s) 101, 739, 1003, 1231, 1236
SduI GDGCHC 2 cut(s) 343, 1298
SfaNI GCATC 3 cut(s) 140, 432, 775
SfcI CTRYAG 1 cut(s) 718
Sfr303I CCGCGG 1 cut(s) 1209
SfuI TTCGAA 1 cut(s) 518
SgrBI CCGCGG 1 cut(s) 1209
SinI GGWCC 2 cut(s) 509, 1203
SmlI CTYRAG 1 cut(s) 342
SmoI CTYRAG 1 cut(s) 342
Sse9I AATT 9 cut(s) 73, 743, 757, 881, 893, 1090, 1099, 1135, 1165
SsiI CCGC 8 cut(s) 10, 242, 381, 650, 1158, 1206, 1208, 1273
SspI AATATT 1 cut(s) 805
StyD4I CCNGG 5 cut(s) 99, 737, 1001, 1229, 1234
StyI CCWWGG 2 cut(s) 90, 334
TaaI ACNGT 2 cut(s) 392, 843
TaiI ACGT 2 cut(s) 1021, 1285
TaqI TCGA 5 cut(s) 105, 180, 518, 852, 1107
TasI AATT 9 cut(s) 73, 743, 757, 881, 893, 1090, 1099, 1135, 1165
TatI WGTACW 2 cut(s) 387, 629
TauI GCSGC 3 cut(s) 13, 653, 1276
TfiI GAWTC 5 cut(s) 230, 575, 723, 1006, 1053
Tru1I TTAA 5 cut(s) 66, 222, 348, 756, 1065
Tru9I TTAA 5 cut(s) 66, 222, 348, 756, 1065
TscAI CASTG 2 cut(s) 141, 848
TseFI GTSAC 2 cut(s) 196, 997
Tsp45I GTSAC 2 cut(s) 196, 997
TspDTI ATGAA 9 cut(s) 17, 47, 302, 780, 815, 836, 849, 934, 966
TspRI CASTG 2 cut(s) 141, 848
VpaK11BI GGWCC 2 cut(s) 509, 1203
VspI ATTAAT 1 cut(s) 756
XapI RAATTY 3 cut(s) 73, 893, 1099
XceI RCATGY 1 cut(s) 877
XcmI CCANNNNNNNNNTGG 2 cut(s) 97, 735
XmiI GTMKAC 1 cut(s) 180
XmnI GAANNNNTTC 2 cut(s) 1010, 1166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.