RLG00000025094

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0000125
Physical Location & Seq
Reverse (-)
41920280 .. 41921614
1335 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000025094

Sequence Viewer

Length: 1335 bp
ATGGCACAGAGAATGAAAAGCAGCAATAACGCAGAGCTAAAGGTGATGGACCTATTAGAATTGCCCTTGGATATCCTCATTAACATCCTCTCGAGATTGCCAGCTGAATCACTTCTCTGCATCCGGTACGTGTCTAAGGCCTTGTTAAACATGGTTGCTGACCCCTCTTTTGCTAGAGTACTACACGCGCATCTACAAGTGCCTCAACTCATGCTTTTTAGTGGTCGAAAATATCATCCTAAGCCTGGGGGTATTGAAGTTTTAGCATCCCTGCAACCAGTCAAATACGATGGCTACAGGGCCTTGACAAAAGGCCAATATGAAATTAGTGTCACCGCAAGGAAAATATACAACTCCGAGGACTCACATTACAAAATAGAATTTGTTTTCTGCAACTTATTTTTCTTGAGAAAATCTTGGGGAATTGGTCGCTTCTTAGTCAATCCTCTTAGGGGAGGAGAAGTTCTAAGACTTCCAATGAGTGACATTACAAAGTATGGCAAGTATTTCAATGTGACCCGGGATTGGTATGGTATGGGATTTGATGATCTAACAAATACATACAAGATTGTTCGTGTCTCCAGAGTTTTTAACGGTAGCTATACAGAGAACTGTCTTGTAACCCAGGTTCTTGTATTAGGCGAAAGCTCATGGAGAGAGATACTTTCGGTTCCCCCAGGTGACTTAAATGCTAATGAGCGTTCATACATTGTGAAGAATGTATGTGCCAATGGAGACATGCATTGGTTAATTACTGGCCATTTCACAATGAAAGGAAGTGAAGGAACATGCCACATAATATCTTTCGACTTCAAGAGAGAAGAGTTCTGTTGGACTCCTCATCCCATATTACAAAGCTCGAAGGTGAGCTCGGACTTGTACTTCAACTTGCACTTGCTTACCCTGAGAGGATCTATGGCCTTGGTGTATCAGTCTGCATCACAAGGTGGGACTATGGATATTGAGATATGGGTGTTAAAAAATTATGATAAAAAAGAGTGGACACGAGATTACATCATAAATAGCAAACGTTTTGATGGATCTTGCCATGAATGGGAGCACGGCATATTTTTCAAAGCATCTACTTATACAGTCTTTTTGGATCTCAATTGTTTTTCAGTGAAGTACATAAAATATGAGTACGGAGAGTATCCTACGATCTTGAGTTACACTAGGAGCTTGGTTTCCTTAAAAGAATATGGGGATTTGTTTGAAGGTGAACCATCAGATTATGGAAGCCTGGAAAGTTATGGAAAATTGATTGAAAGAGAAGAACAAGGCTTTAGTCTATCTGAGAGGCACGTGCTTAGATACACTTCATCAGGAGGTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

445

Amino Acids

51.03

Weight (kDa)

7.58

Isoelectric Point (pI)

39.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 18 - 57 8.6e-08 F-box domain
F-box-like PF12937 19 - 57 4.1e-06 F-box-like
FBA_1 PF07734 109 - 337 1e-15 F-box associated beta propeller domain
FBA_3 PF08268 177 - 343 6.8e-17 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 188
AciI CCGC 1 cut(s) 336
AclI AACGTT 1 cut(s) 1030
AclWI GGATC 3 cut(s) 919, 1048, 1110
AcoI YGGCCR 1 cut(s) 757
AcsI RAATTY 1 cut(s) 380
AcvI CACGTG 1 cut(s) 1303
AdeI CACNNNGTG 1 cut(s) 947
AfaI GTAC 5 cut(s) 128, 180, 881, 1127, 1142
AfiI CCNNNNNNNGG 4 cut(s) 245, 452, 525, 1054
AflIII ACRYGT 1 cut(s) 129
AgsI TTSAA 7 cut(s) 257, 511, 814, 886, 1075, 1214, 1265
AjnI CCWGG 4 cut(s) 244, 624, 676, 1239
AloI GAACNNNNNNTCC 2 cut(s) 447, 479
AluBI AGCT 7 cut(s) 37, 104, 600, 648, 858, 870, 1179
AluI AGCT 7 cut(s) 37, 104, 600, 648, 858, 870, 1179
Alw21I GWGCWC 2 cut(s) 872, 1062
Alw26I GTCTC 2 cut(s) 583, 729
AlwI GGATC 3 cut(s) 919, 1048, 1110
Ama87I CYCGRG 2 cut(s) 91, 519
AoxI GGCC 5 cut(s) 138, 300, 313, 757, 918
ApeKI GCWGC 1 cut(s) 21
ApoI RAATTY 1 cut(s) 380
ArsI GACNNNNNNTTYG 2 cut(s) 152, 184
Asp700I GAANNNNTTC 1 cut(s) 111
AspLEI GCGC 1 cut(s) 190
AspS9I GGNCC 2 cut(s) 49, 300
AsuC2I CCSGG 2 cut(s) 520, 521
AsuHPI GGTGA 5 cut(s) 55, 325, 692, 877, 1229
AvaI CYCGRG 2 cut(s) 91, 519
AvaII GGWCC 1 cut(s) 49
BalI TGGCCA 1 cut(s) 759
BanII GRGCYC 1 cut(s) 872
BauI CACGAG 1 cut(s) 1005
BbrPI CACGTG 1 cut(s) 1303
Bbv12I GWGCWC 2 cut(s) 872, 1062
BbvI GCAGC 1 cut(s) 33
BccI CCATC 4 cut(s) 40, 284, 1031, 1231
BceAI ACGGC 1 cut(s) 1078
BciT130I CCWGG 4 cut(s) 246, 626, 678, 1241
BciVI GTATCC 1 cut(s) 1161
BcnI CCSGG 2 cut(s) 520, 521
BcoDI GTCTC 2 cut(s) 583, 729
BfaI CTAG 2 cut(s) 174, 1173
BfmI CTRYAG 1 cut(s) 295
BfuI GTATCC 1 cut(s) 1161
BisI GCNGC 1 cut(s) 22
BlsI GCNGC 1 cut(s) 23
BmcAI AGTACT 1 cut(s) 180
Bme1390I CCNGG 6 cut(s) 246, 520, 521, 626, 678, 1241
Bme18I GGWCC 1 cut(s) 49
BmeT110I CYCGRG 2 cut(s) 91, 519
BmgT120I GGNCC 2 cut(s) 49, 300
BmiI GGNNCC 1 cut(s) 672
BmrFI CCNGG 6 cut(s) 246, 520, 521, 626, 678, 1241
BmsI GCATC 5 cut(s) 129, 199, 275, 947, 1088
BpmI CTGGAG 1 cut(s) 565
Bpu10I CCTNAGC 1 cut(s) 240
BpuEI CTTGAG 2 cut(s) 427, 1183
BpuMI CCSGG 2 cut(s) 520, 521
BsaAI YACGTR 2 cut(s) 130, 1303
BsaJI CCNNGG 7 cut(s) 66, 245, 357, 519, 624, 676, 921
BsaWI WCCGGW 1 cut(s) 123
BsaXI ACNNNNNCTCC 2 cut(s) 447, 477
Bsc4I CCNNNNNNNGG 4 cut(s) 245, 452, 525, 1054
Bse1I ACTGG 2 cut(s) 278, 760
BseBI CCWGG 4 cut(s) 246, 626, 678, 1241
BseDI CCNNGG 7 cut(s) 66, 245, 357, 519, 624, 676, 921
BseGI GGATG 5 cut(s) 84, 120, 235, 266, 841
BseLI CCNNNNNNNGG 4 cut(s) 245, 452, 525, 1054
BseMII CTCAG 2 cut(s) 896, 1284
BseNI ACTGG 2 cut(s) 278, 760
BseRI GAGGAG 2 cut(s) 471, 828
BseXI GCAGC 1 cut(s) 33
Bsh1236I CGCG 1 cut(s) 188
BshFI GGCC 5 cut(s) 140, 302, 315, 759, 920
BsiHKAI GWGCWC 2 cut(s) 872, 1062
BsiHKCI CYCGRG 2 cut(s) 91, 519
BsiSI CCGG 2 cut(s) 124, 520
BslFI GGGAC 1 cut(s) 964
BslI CCNNNNNNNGG 4 cut(s) 245, 452, 525, 1054
BsmAI GTCTC 2 cut(s) 583, 729
BsmFI GGGAC 1 cut(s) 964
BsnI GGCC 5 cut(s) 140, 302, 315, 759, 920
BsoBI CYCGRG 2 cut(s) 91, 519
Bsp1286I GDGCHC 2 cut(s) 872, 1062
Bsp143I GATC 5 cut(s) 547, 911, 1040, 1102, 1158
BspACI CCGC 1 cut(s) 336
BspANI GGCC 5 cut(s) 140, 302, 315, 759, 920
BspCNI CTCAG 2 cut(s) 897, 1285
BspFNI CGCG 1 cut(s) 188
BspLI GGNNCC 1 cut(s) 672
BspPI GGATC 3 cut(s) 919, 1048, 1110
BsrI ACTGG 2 cut(s) 278, 760
BssECI CCNNGG 7 cut(s) 66, 245, 357, 519, 624, 676, 921
BssMI GATC 5 cut(s) 547, 911, 1040, 1102, 1158
BssSI CACGAG 1 cut(s) 1005
BssT1I CCWWGG 2 cut(s) 66, 921
Bst2BI CACGAG 1 cut(s) 1005
Bst2UI CCWGG 4 cut(s) 246, 626, 678, 1241
Bst4CI ACNGT 3 cut(s) 596, 614, 1093
Bst6I CTCTTC 1 cut(s) 816
BstBAI YACGTR 2 cut(s) 130, 1303
BstC8I GCNNGC 1 cut(s) 102
BstDEI CTNAG 8 cut(s) 135, 240, 436, 449, 467, 905, 1293, 1307
BstF5I GGATG 5 cut(s) 84, 120, 235, 266, 841
BstFNI CGCG 1 cut(s) 188
BstHHI GCGC 1 cut(s) 190
BstKTI GATC 5 cut(s) 550, 914, 1043, 1105, 1161
BstMAI GTCTC 2 cut(s) 583, 729
BstMBI GATC 5 cut(s) 547, 911, 1040, 1102, 1158
BstNI CCWGG 4 cut(s) 246, 626, 678, 1241
BstNSI RCATGY 2 cut(s) 742, 792
BstSCI CCNGG 6 cut(s) 244, 518, 519, 624, 676, 1239
BstSFI CTRYAG 1 cut(s) 295
BstUI CGCG 1 cut(s) 188
BstV1I GCAGC 1 cut(s) 33
BstX2I RGATCY 3 cut(s) 911, 1040, 1102
BstYI RGATCY 3 cut(s) 911, 1040, 1102
BsuI GTATCC 1 cut(s) 1161
BsuRI GGCC 5 cut(s) 140, 302, 315, 759, 920
BtsCI GGATG 5 cut(s) 84, 120, 235, 266, 841
BtsIMutI CAGTG 1 cut(s) 1125
Cac8I GCNNGC 1 cut(s) 102
CfoI GCGC 1 cut(s) 190
Cfr13I GGNCC 2 cut(s) 49, 300
Cfr9I CCCGGG 1 cut(s) 519
Csp6I GTAC 5 cut(s) 127, 179, 880, 1126, 1141
CviAII CATG 6 cut(s) 151, 211, 651, 739, 789, 1049
CviQI GTAC 5 cut(s) 127, 179, 880, 1126, 1141
DdeI CTNAG 8 cut(s) 135, 240, 436, 449, 467, 905, 1293, 1307
DpnI GATC 5 cut(s) 549, 913, 1042, 1104, 1160
DpnII GATC 5 cut(s) 547, 911, 1040, 1102, 1158
DraIII CACNNNGTG 1 cut(s) 947
EaeI YGGCCR 1 cut(s) 757
Eam1104I CTCTTC 1 cut(s) 816
EarI CTCTTC 1 cut(s) 816
Ecl136II GAGCTC 1 cut(s) 870
Eco130I CCWWGG 2 cut(s) 66, 921
Eco147I AGGCCT 1 cut(s) 140
Eco24I GRGCYC 1 cut(s) 872
Eco32I GATATC 1 cut(s) 73
Eco47I GGWCC 1 cut(s) 49
Eco53kI GAGCTC 1 cut(s) 870
Eco72I CACGTG 1 cut(s) 1303
Eco88I CYCGRG 2 cut(s) 91, 519
EcoICRI GAGCTC 1 cut(s) 870
EcoO109I RGGNCCY 1 cut(s) 300
EcoRII CCWGG 4 cut(s) 244, 624, 676, 1239
EcoRV GATATC 1 cut(s) 73
EcoT14I CCWWGG 2 cut(s) 66, 921
EcoT22I ATGCAT 1 cut(s) 744
EcoT38I GRGCYC 1 cut(s) 872
ErhI CCWWGG 2 cut(s) 66, 921
FaeI CATG 6 cut(s) 154, 214, 654, 742, 792, 1052
FaqI GGGAC 1 cut(s) 964
FatI CATG 6 cut(s) 150, 210, 650, 738, 788, 1048
Fnu4HI GCNGC 1 cut(s) 22
FokI GGATG 5 cut(s) 71, 107, 222, 253, 828
FriOI GRGCYC 1 cut(s) 872
Fsp4HI GCNGC 1 cut(s) 22
FspBI CTAG 2 cut(s) 174, 1173
GlaI GCGC 1 cut(s) 189
GluI GCNGC 1 cut(s) 22
GsuI CTGGAG 1 cut(s) 565
HaeIII GGCC 5 cut(s) 140, 302, 315, 759, 920
HapII CCGG 2 cut(s) 124, 520
HhaI GCGC 1 cut(s) 190
Hin1II CATG 6 cut(s) 154, 214, 654, 742, 792, 1052
Hin6I GCGC 1 cut(s) 188
HinP1I GCGC 1 cut(s) 188
HinfI GANTC 3 cut(s) 107, 362, 835
HpaII CCGG 2 cut(s) 124, 520
HphI GGTGA 5 cut(s) 55, 325, 692, 877, 1229
Hpy166II GTNNAC 2 cut(s) 1002, 1220
Hpy188I TCNGA 4 cut(s) 358, 874, 1228, 1294
Hpy188III TCNNGA 7 cut(s) 91, 93, 406, 582, 814, 1162, 1323
Hpy8I GTNNAC 2 cut(s) 1002, 1220
HpyAV CCTTC 3 cut(s) 776, 856, 1208
HpyCH4III ACNGT 3 cut(s) 596, 614, 1093
HpyCH4IV ACGT 3 cut(s) 129, 1030, 1302
HpyCH4V TGCA 6 cut(s) 120, 274, 393, 742, 892, 938
HpyF3I CTNAG 8 cut(s) 135, 240, 436, 449, 467, 905, 1293, 1307
HpySE526I ACGT 3 cut(s) 129, 1030, 1302
Hsp92II CATG 6 cut(s) 154, 214, 654, 742, 792, 1052
HspAI GCGC 1 cut(s) 188
Kzo9I GATC 5 cut(s) 547, 911, 1040, 1102, 1158
LmnI GCTCC 2 cut(s) 1057, 1176
Lsp1109I GCAGC 1 cut(s) 33
LweI GCATC 5 cut(s) 129, 199, 275, 947, 1088
MaeI CTAG 2 cut(s) 174, 1173
MaeII ACGT 3 cut(s) 129, 1030, 1302
MaeIII GTNAC 6 cut(s) 331, 482, 514, 619, 680, 1166
MalI GATC 5 cut(s) 549, 913, 1042, 1104, 1160
MboI GATC 5 cut(s) 547, 911, 1040, 1102, 1158
MboII GAAGA 3 cut(s) 727, 833, 1283
MfeI CAATTG 1 cut(s) 1108
MflI RGATCY 3 cut(s) 911, 1040, 1102
MhlI GDGCHC 2 cut(s) 872, 1062
MlsI TGGCCA 1 cut(s) 759
MluCI AATT 8 cut(s) 59, 324, 380, 423, 750, 982, 1108, 1256
MluNI TGGCCA 1 cut(s) 759
MlyI GAGTC 2 cut(s) 356, 829
MmeI TCCRAC 1 cut(s) 812
Mox20I TGGCCA 1 cut(s) 759
Mph1103I ATGCAT 1 cut(s) 744
MroXI GAANNNNTTC 1 cut(s) 111
MscI TGGCCA 1 cut(s) 759
MseI TTAA 7 cut(s) 81, 146, 591, 686, 749, 977, 1190
Msp20I TGGCCA 1 cut(s) 759
MspA1I CMGCKG 1 cut(s) 104
MspI CCGG 2 cut(s) 124, 520
MspR9I CCNGG 6 cut(s) 246, 520, 521, 626, 678, 1241
MunI CAATTG 1 cut(s) 1108
MvaI CCWGG 4 cut(s) 246, 626, 678, 1241
MvnI CGCG 1 cut(s) 188
NciI CCSGG 2 cut(s) 520, 521
NdeII GATC 5 cut(s) 547, 911, 1040, 1102, 1158
NlaIII CATG 6 cut(s) 154, 214, 654, 742, 792, 1052
NlaIV GGNNCC 1 cut(s) 672
NmuCI GTSAC 4 cut(s) 331, 482, 514, 680
NsiI ATGCAT 1 cut(s) 744
NspI RCATGY 2 cut(s) 742, 792
PaeR7I CTCGAG 1 cut(s) 91
PceI AGGCCT 1 cut(s) 140
PdmI GAANNNNTTC 1 cut(s) 111
PfeI GAWTC 1 cut(s) 107
PkrI GCNGC 1 cut(s) 23
PleI GAGTC 2 cut(s) 356, 829
PmaCI CACGTG 1 cut(s) 1303
PmlI CACGTG 1 cut(s) 1303
PpsI GAGTC 2 cut(s) 356, 829
Ppu21I YACGTR 2 cut(s) 130, 1303
Psp124BI GAGCTC 1 cut(s) 872
Psp1406I AACGTT 1 cut(s) 1030
Psp6I CCWGG 4 cut(s) 244, 624, 676, 1239
PspCI CACGTG 1 cut(s) 1303
PspGI CCWGG 4 cut(s) 244, 624, 676, 1239
PspN4I GGNNCC 1 cut(s) 672
PspPI GGNCC 2 cut(s) 49, 300
PsrI GAACNNNNNNTAC 2 cut(s) 612, 644
PsuI RGATCY 3 cut(s) 911, 1040, 1102
PvuII CAGCTG 1 cut(s) 104
RsaI GTAC 5 cut(s) 128, 180, 881, 1127, 1142
RsaNI GTAC 5 cut(s) 127, 179, 880, 1126, 1141
SacI GAGCTC 1 cut(s) 872
SaqAI TTAA 7 cut(s) 81, 146, 591, 686, 749, 977, 1190
SatI GCNGC 1 cut(s) 22
Sau3AI GATC 5 cut(s) 547, 911, 1040, 1102, 1158
Sau96I GGNCC 2 cut(s) 49, 300
ScaI AGTACT 1 cut(s) 180
SchI GAGTC 2 cut(s) 356, 829
ScrFI CCNGG 6 cut(s) 246, 520, 521, 626, 678, 1241
SduI GDGCHC 2 cut(s) 872, 1062
SfaNI GCATC 5 cut(s) 129, 199, 275, 947, 1088
SfcI CTRYAG 1 cut(s) 295
Sfr274I CTCGAG 1 cut(s) 91
SinI GGWCC 1 cut(s) 49
SlaI CTCGAG 1 cut(s) 91
SmaI CCCGGG 1 cut(s) 521
SmlI CTYRAG 3 cut(s) 91, 406, 1162
SmoI CTYRAG 3 cut(s) 91, 406, 1162
Sse9I AATT 8 cut(s) 59, 324, 380, 423, 750, 982, 1108, 1256
SseBI AGGCCT 1 cut(s) 140
SsiI CCGC 1 cut(s) 336
SspMI CTAG 2 cut(s) 174, 1173
SstI GAGCTC 1 cut(s) 872
StuI AGGCCT 1 cut(s) 140
StyD4I CCNGG 6 cut(s) 244, 518, 519, 624, 676, 1239
StyI CCWWGG 2 cut(s) 66, 921
TaaI ACNGT 3 cut(s) 596, 614, 1093
TaiI ACGT 3 cut(s) 132, 1033, 1305
TaqI TCGA 4 cut(s) 92, 226, 807, 860
TasI AATT 8 cut(s) 59, 324, 380, 423, 750, 982, 1108, 1256
TatI WGTACW 3 cut(s) 178, 879, 1125
TfiI GAWTC 1 cut(s) 107
Tru1I TTAA 7 cut(s) 81, 146, 591, 686, 749, 977, 1190
Tru9I TTAA 7 cut(s) 81, 146, 591, 686, 749, 977, 1190
TscAI CASTG 1 cut(s) 1125
TseFI GTSAC 4 cut(s) 331, 482, 514, 680
TseI GCWGC 1 cut(s) 21
Tsp45I GTSAC 4 cut(s) 331, 482, 514, 680
TspDTI ATGAA 6 cut(s) 29, 336, 693, 785, 1065, 1308
TspGWI ACGGA 1 cut(s) 1158
TspMI CCCGGG 1 cut(s) 519
TspRI CASTG 1 cut(s) 1125
VpaK11BI GGWCC 1 cut(s) 49
XapI RAATTY 1 cut(s) 380
XceI RCATGY 2 cut(s) 742, 792
XhoI CTCGAG 1 cut(s) 91
XmaI CCCGGG 1 cut(s) 519
XmnI GAANNNNTTC 1 cut(s) 111
XspI CTAG 2 cut(s) 174, 1173
ZrmI AGTACT 1 cut(s) 180
Zsp2I ATGCAT 1 cut(s) 744
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.