RLG00000023502

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0000125
Physical Location & Seq
Forward (+)
24677410 .. 24681234
3825 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023502

Sequence Viewer

Length: 1359 bp
ATGGGGACCTCTCTAGTTTTGAGTCTTCTAGTGGCAGTAGTGGCTTTCGCTTCGGTCGGAGAAAATTTTCAAACATCGGCTCTTACCTTTCGGCCTGTAACTGAAGATTTGGAGATGCTGAGAACGAAACGAATGAGCCGGTGCAGCAACAATGCAAAGTTGGTGGACCTACCGATTGATATCCTCATCAACATCCTTTTGAGACTGCCGGCAAAATCACTTTGCTGCACACAATGTGTCTGTAAAACCCTGCTTCACATAGTTGAAGATCGTTCCTTTGCAACACTAGTGCATCTGCGCTTGCTTAATACTGCTTCCGATGCAGTCGCTGAAGTGCCTCAACTTTTGCTTCTTAATGTTGCTCGAGATGTTGACAATGGAAGCTTAATAACGATCTCTCCATCGCAGATATATGATGGCAATGTCTTGACAAAAAGCAGACATGCCATTGTCTCAAAGATTGCATCCTGCCGATATGGTTACAATGTTGGTTTTGTTTTCTGCAACTTGTTCTTCTTTAATGACAAAAAGTATGATCGAGGTCCATGCTTCATTTTCAACCCTCTCAGGGGAGAAGTTCTCATGCTCCCAAAGAGTACCGTCCAAGTTCCACCTTTTAGAAATATGATATTCATAGATTGGTACGGCATGGGGTTTGATGATATAACCAACACCTACAAGATTGTTCGTGTTTCCGGAAATGAACGATGCTGTTTGGTGGCCCAAGTTTATATATTAGGCACCAGCTCATGGAAACGGATAAGTTCAGTTCCTCCATGTAATTTAAGCACAAAAAAAATATCTGCATATGGAGACCTGCATTGGTTAATTAATCGCTCAAGTACTGGAGGACAAATCTGCATAGTTTCTTTTGACTTCAAGAAGGAGGAGTTCTATTTGACGCCTCATCCCGCATTAAGAAAGCCAGAATATTCTTTCTTGTCCCTTCACTTTGTTAATTTGAGAGGATCTATGGCAATTGTTGATACTTCTTCACATACACATATTGACATATGGGTTTTGAAGAGTTATGAGAAGAAAGAGTGGGTGCGAGATTACAGTGTGAATCTCGAACTGCCTGCTGTAGAGCGTCCTTGGCATCTTGACCGGTGTGGTACTTGCATCGGTGAGTGGGAGAATGGCATATTTTTCGTAGAATTTTATGTTACTACTAACGCATTCTTTGTGGATACAAGATGTGATTCTGTGAAACGTGTATCACTTGGAGGTTCAGAGTATACGAGGATCTTCAGCTATCCTGGGAGTTTGATTTCATTAAAAGATTATGGCAATTTGATTAGAGCAGAAGCAGGTAACTGGAGGCCTGATTTCTCTGAAAAGTCTTGGCAAATTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

453

Amino Acids

51.26

Weight (kDa)

8.42

Isoelectric Point (pI)

29.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 55 - 93 1.9e-08 F-box domain
F-box-like PF12937 55 - 92 9.9e-06 F-box-like
FBA_3 PF08268 143 - 413 5.5e-25 F-box associated beta propeller domain
FBA_1 PF07734 168 - 425 1.1e-17 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 825, 1301
AccB1I GGYRCC 1 cut(s) 740
AccB7I CCANNNNNTGG 1 cut(s) 750
AccI GTMKAC 1 cut(s) 1238
AccIII TCCGGA 1 cut(s) 695
AciI CCGC 1 cut(s) 912
AclWI GGATC 2 cut(s) 976, 1253
AcsI RAATTY 2 cut(s) 64, 1157
AcuI CTGAAG 3 cut(s) 123, 351, 1234
AcyI GRCGYC 1 cut(s) 902
AdeI CACNNNGTG 1 cut(s) 236
AfaI GTAC 4 cut(s) 598, 644, 844, 1117
AfiI CCNNNNNNNGG 3 cut(s) 568, 569, 750
AflIII ACRYGT 1 cut(s) 1213
AgeI ACCGGT 1 cut(s) 1107
AgsI TTSAA 5 cut(s) 71, 266, 559, 880, 1024
AhlI ACTAGT 1 cut(s) 286
AjnI CCWGG 1 cut(s) 1258
AluBI AGCT 3 cut(s) 384, 747, 1254
AluI AGCT 3 cut(s) 384, 747, 1254
Alw26I GTCTC 3 cut(s) 196, 457, 807
AlwI GGATC 2 cut(s) 976, 1253
AlwNI CAGNNNCTG 1 cut(s) 329
Ama87I CYCGRG 1 cut(s) 363
Aor13HI TCCGGA 1 cut(s) 695
AoxI GGCC 3 cut(s) 92, 720, 1322
ApeKI GCWGC 2 cut(s) 144, 225
ApoI RAATTY 2 cut(s) 64, 1157
AseI ATTAAT 1 cut(s) 831
AsiGI ACCGGT 1 cut(s) 1107
Asp700I GAANNNNTTC 1 cut(s) 66
AspLEI GCGC 1 cut(s) 300
AspS9I GGNCC 4 cut(s) 6, 166, 542, 721
AsuHPI GGTGA 1 cut(s) 1139
AvaI CYCGRG 1 cut(s) 363
AvaII GGWCC 3 cut(s) 6, 166, 542
BanI GGYRCC 1 cut(s) 740
BbsI GAAGAC 1 cut(s) 17
BbvI GCAGC 2 cut(s) 156, 212
BccI CCATC 2 cut(s) 409, 410
BceAI ACGGC 1 cut(s) 661
BcgI CGANNNNNNTGC 6 cut(s) 528, 562, 1061, 1095, 1132, 1166
BciT130I CCWGG 1 cut(s) 1260
BciVI GTATCC 1 cut(s) 1183
BcoDI GTCTC 3 cut(s) 196, 457, 807
BcuI ACTAGT 1 cut(s) 286
BfaI CTAG 3 cut(s) 14, 29, 287
BfmI CTRYAG 1 cut(s) 1083
BfuAI ACCTGC 2 cut(s) 825, 1301
BfuI GTATCC 1 cut(s) 1183
BisI GCNGC 2 cut(s) 145, 226
BlsI GCNGC 2 cut(s) 146, 227
BmcAI AGTACT 1 cut(s) 844
Bme1390I CCNGG 1 cut(s) 1260
Bme18I GGWCC 3 cut(s) 6, 166, 542
BmeT110I CYCGRG 1 cut(s) 363
BmgT120I GGNCC 4 cut(s) 6, 166, 542, 721
BmiI GGNNCC 2 cut(s) 7, 742
BmrFI CCNGG 1 cut(s) 1260
BmsI GCATC 7 cut(s) 105, 301, 310, 473, 698, 1108, 1131
BpiI GAAGAC 1 cut(s) 17
BplI GAGNNNNNCTC 2 cut(s) 564, 596
BpmI CTGGAG 2 cut(s) 867, 1339
BpuEI CTTGAG 1 cut(s) 823
BsaBI GATNNNNATC 1 cut(s) 179
BsaHI GRCGYC 1 cut(s) 902
BsaI GGTCTC 1 cut(s) 807
BsaJI CCNNGG 2 cut(s) 1094, 1259
BsaWI WCCGGW 2 cut(s) 695, 1107
BsaXI ACNNNNNCTCC 2 cut(s) 382, 412
Bsc4I CCNNNNNNNGG 3 cut(s) 568, 569, 750
Bse118I RCCGGY 3 cut(s) 138, 208, 1107
Bse1I ACTGG 2 cut(s) 850, 1322
Bse3DI GCAATG 1 cut(s) 427
Bse8I GATNNNNATC 1 cut(s) 179
BseAI TCCGGA 1 cut(s) 695
BseBI CCWGG 1 cut(s) 1260
BseDI CCNNGG 2 cut(s) 1094, 1259
BseGI GGATG 3 cut(s) 192, 464, 907
BseJI GATNNNNATC 1 cut(s) 179
BseLI CCNNNNNNNGG 3 cut(s) 568, 569, 750
BseMI GCAATG 1 cut(s) 427
BseMII CTCAG 2 cut(s) 110, 580
BseNI ACTGG 2 cut(s) 850, 1322
BseRI GAGGAG 1 cut(s) 902
BseXI GCAGC 2 cut(s) 156, 212
BsgI GTGCAG 2 cut(s) 163, 211
Bsh1285I CGRYCG 1 cut(s) 57
BshFI GGCC 3 cut(s) 94, 722, 1324
BshNI GGYRCC 1 cut(s) 740
BshTI ACCGGT 1 cut(s) 1107
BsiEI CGRYCG 1 cut(s) 57
BsiHKCI CYCGRG 1 cut(s) 363
BsiSI CCGG 4 cut(s) 139, 209, 696, 1108
BslFI GGGAC 2 cut(s) 19, 928
BslI CCNNNNNNNGG 3 cut(s) 568, 569, 750
BsmAI GTCTC 3 cut(s) 196, 457, 807
BsmFI GGGAC 2 cut(s) 19, 928
BsmI GAATGC 1 cut(s) 1178
BsnI GGCC 3 cut(s) 94, 722, 1324
Bso31I GGTCTC 1 cut(s) 807
BsoBI CYCGRG 1 cut(s) 363
Bsp13I TCCGGA 1 cut(s) 695
Bsp143I GATC 5 cut(s) 268, 393, 535, 968, 1245
BspACI CCGC 1 cut(s) 912
BspANI GGCC 3 cut(s) 94, 722, 1324
BspCNI CTCAG 2 cut(s) 111, 579
BspEI TCCGGA 1 cut(s) 695
BspLI GGNNCC 2 cut(s) 7, 742
BspMI ACCTGC 2 cut(s) 825, 1301
BspPI GGATC 2 cut(s) 976, 1253
BspT107I GGYRCC 1 cut(s) 740
BspTNI GGTCTC 1 cut(s) 807
BsrDI GCAATG 1 cut(s) 427
BsrFI RCCGGY 3 cut(s) 138, 208, 1107
BsrI ACTGG 2 cut(s) 850, 1322
BssAI RCCGGY 3 cut(s) 138, 208, 1107
BssECI CCNNGG 2 cut(s) 1094, 1259
BssMI GATC 5 cut(s) 268, 393, 535, 968, 1245
BssNAI GTATAC 1 cut(s) 1239
BssNI GRCGYC 1 cut(s) 902
BssT1I CCWWGG 1 cut(s) 1094
Bst1107I GTATAC 1 cut(s) 1239
Bst2UI CCWGG 1 cut(s) 1260
Bst4CI ACNGT 2 cut(s) 601, 1061
Bst6I CTCTTC 1 cut(s) 1019
BstACI GRCGYC 1 cut(s) 902
BstC8I GCNNGC 3 cut(s) 210, 302, 1080
BstDEI CTNAG 2 cut(s) 119, 566
BstF5I GGATG 3 cut(s) 192, 464, 907
BstHHI GCGC 1 cut(s) 300
BstKTI GATC 5 cut(s) 271, 396, 538, 971, 1248
BstMAI GTCTC 3 cut(s) 196, 457, 807
BstMBI GATC 5 cut(s) 268, 393, 535, 968, 1245
BstMCI CGRYCG 1 cut(s) 57
BstMWI GCNNNNNNNGC 4 cut(s) 41, 144, 320, 1096
BstNI CCWGG 1 cut(s) 1260
BstNSI RCATGY 1 cut(s) 446
BstSCI CCNGG 1 cut(s) 1258
BstSFI CTRYAG 1 cut(s) 1083
BstV1I GCAGC 2 cut(s) 156, 212
BstV2I GAAGAC 1 cut(s) 17
BstX2I RGATCY 2 cut(s) 968, 1245
BstYI RGATCY 2 cut(s) 968, 1245
BstZ17I GTATAC 1 cut(s) 1239
BsuI GTATCC 1 cut(s) 1183
BsuRI GGCC 3 cut(s) 94, 722, 1324
BtgZI GCGATG 1 cut(s) 387
BtsCI GGATG 3 cut(s) 192, 464, 907
BtsIMutI CAGTG 1 cut(s) 1066
BveI ACCTGC 2 cut(s) 825, 1301
Cac8I GCNNGC 3 cut(s) 210, 302, 1080
CaiI CAGNNNCTG 1 cut(s) 329
CfoI GCGC 1 cut(s) 300
Cfr10I RCCGGY 3 cut(s) 138, 208, 1107
Cfr13I GGNCC 4 cut(s) 6, 166, 542, 721
CseI GACGC 2 cut(s) 910, 1079
Csp6I GTAC 4 cut(s) 597, 643, 843, 1116
CspAI ACCGGT 1 cut(s) 1107
CspCI CAANNNNNGTGG 2 cut(s) 144, 179
CviAII CATG 6 cut(s) 443, 546, 583, 649, 750, 777
CviQI GTAC 4 cut(s) 597, 643, 843, 1116
DdeI CTNAG 2 cut(s) 119, 566
DpnI GATC 5 cut(s) 270, 395, 537, 970, 1247
DpnII GATC 5 cut(s) 268, 393, 535, 968, 1245
DraIII CACNNNGTG 1 cut(s) 236
Eam1104I CTCTTC 1 cut(s) 1019
EarI CTCTTC 1 cut(s) 1019
Eco130I CCWWGG 1 cut(s) 1094
Eco147I AGGCCT 1 cut(s) 1324
Eco31I GGTCTC 1 cut(s) 807
Eco32I GATATC 1 cut(s) 181
Eco47I GGWCC 3 cut(s) 6, 166, 542
Eco57I CTGAAG 3 cut(s) 123, 351, 1234
Eco88I CYCGRG 1 cut(s) 363
EcoO109I RGGNCCY 1 cut(s) 6
EcoRII CCWGG 1 cut(s) 1258
EcoRV GATATC 1 cut(s) 181
EcoT14I CCWWGG 1 cut(s) 1094
ErhI CCWWGG 1 cut(s) 1094
FaeI CATG 6 cut(s) 446, 549, 586, 652, 753, 780
FaqI GGGAC 2 cut(s) 19, 928
FatI CATG 6 cut(s) 442, 545, 582, 648, 749, 776
FauI CCCGC 1 cut(s) 919
FauNDI CATATG 2 cut(s) 808, 1013
FblI GTMKAC 1 cut(s) 1238
Fnu4HI GCNGC 2 cut(s) 145, 226
FokI GGATG 3 cut(s) 179, 451, 894
Fsp4HI GCNGC 2 cut(s) 145, 226
FspBI CTAG 3 cut(s) 14, 29, 287
GlaI GCGC 1 cut(s) 299
GluI GCNGC 2 cut(s) 145, 226
GsuI CTGGAG 2 cut(s) 867, 1339
HaeIII GGCC 3 cut(s) 94, 722, 1324
HapII CCGG 4 cut(s) 139, 209, 696, 1108
HgaI GACGC 2 cut(s) 910, 1079
HhaI GCGC 1 cut(s) 300
Hin1I GRCGYC 1 cut(s) 902
Hin1II CATG 6 cut(s) 446, 549, 586, 652, 753, 780
Hin6I GCGC 1 cut(s) 298
HinP1I GCGC 1 cut(s) 298
HincII GTYRAC 1 cut(s) 373
HindII GTYRAC 1 cut(s) 373
HindIII AAGCTT 1 cut(s) 382
HinfI GANTC 3 cut(s) 22, 1066, 1202
HpaII CCGG 4 cut(s) 139, 209, 696, 1108
HphI GGTGA 1 cut(s) 1139
Hpy166II GTNNAC 3 cut(s) 166, 373, 1239
Hpy188I TCNGA 4 cut(s) 59, 319, 1234, 1336
Hpy188III TCNNGA 6 cut(s) 365, 427, 696, 880, 1070, 1103
Hpy8I GTNNAC 3 cut(s) 166, 373, 1239
HpyAV CCTTC 2 cut(s) 877, 956
HpyCH4III ACNGT 2 cut(s) 601, 1061
HpyCH4IV ACGT 1 cut(s) 1213
HpyF10VI GCNNNNNNNGC 4 cut(s) 41, 144, 320, 1096
HpyF3I CTNAG 2 cut(s) 119, 566
HpySE526I ACGT 1 cut(s) 1213
Hsp92I GRCGYC 1 cut(s) 902
Hsp92II CATG 6 cut(s) 446, 549, 586, 652, 753, 780
HspAI GCGC 1 cut(s) 298
Kpn2I TCCGGA 1 cut(s) 695
KroI GCCGGC 1 cut(s) 208
KroNI GCCGGC 1 cut(s) 210
Kzo9I GATC 5 cut(s) 268, 393, 535, 968, 1245
LmnI GCTCC 1 cut(s) 591
Lsp1109I GCAGC 2 cut(s) 156, 212
LweI GCATC 7 cut(s) 105, 301, 310, 473, 698, 1108, 1131
MaeI CTAG 3 cut(s) 14, 29, 287
MaeII ACGT 1 cut(s) 1213
MaeIII GTNAC 4 cut(s) 97, 479, 1165, 1313
MalI GATC 5 cut(s) 270, 395, 537, 970, 1247
MboI GATC 5 cut(s) 268, 393, 535, 968, 1245
MboII GAAGA 8 cut(s) 17, 116, 278, 505, 984, 1036, 1048, 1240
MfeI CAATTG 1 cut(s) 978
MflI RGATCY 2 cut(s) 968, 1245
MluCI AATT 8 cut(s) 64, 781, 828, 958, 978, 1157, 1291, 1350
MlyI GAGTC 1 cut(s) 31
MmeI TCCRAC 1 cut(s) 37
MroI TCCGGA 1 cut(s) 695
MroNI GCCGGC 1 cut(s) 208
MroXI GAANNNNTTC 1 cut(s) 66
MspI CCGG 4 cut(s) 139, 209, 696, 1108
MspR9I CCNGG 1 cut(s) 1260
MunI CAATTG 1 cut(s) 978
Mva1269I GAATGC 1 cut(s) 1178
MvaI CCWGG 1 cut(s) 1260
MwoI GCNNNNNNNGC 4 cut(s) 41, 144, 320, 1096
NaeI GCCGGC 1 cut(s) 210
NdeI CATATG 2 cut(s) 808, 1013
NdeII GATC 5 cut(s) 268, 393, 535, 968, 1245
NgoMIV GCCGGC 1 cut(s) 208
NlaIII CATG 6 cut(s) 446, 549, 586, 652, 753, 780
NlaIV GGNNCC 2 cut(s) 7, 742
NspI RCATGY 1 cut(s) 446
PacI TTAATTAA 1 cut(s) 831
PaeR7I CTCGAG 1 cut(s) 363
PceI AGGCCT 1 cut(s) 1324
PctI GAATGC 1 cut(s) 1178
PdiI GCCGGC 1 cut(s) 210
PdmI GAANNNNTTC 1 cut(s) 66
PfeI GAWTC 2 cut(s) 1066, 1202
PflMI CCANNNNNTGG 1 cut(s) 750
PinAI ACCGGT 1 cut(s) 1107
PkrI GCNGC 2 cut(s) 146, 227
PleI GAGTC 1 cut(s) 30
PpsI GAGTC 1 cut(s) 30
PpuMI RGGWCCY 1 cut(s) 6
PshBI ATTAAT 1 cut(s) 831
Psp5II RGGWCCY 1 cut(s) 6
Psp6I CCWGG 1 cut(s) 1258
PspGI CCWGG 1 cut(s) 1258
PspN4I GGNNCC 2 cut(s) 7, 742
PspPI GGNCC 4 cut(s) 6, 166, 542, 721
PspPPI RGGWCCY 1 cut(s) 6
PstNI CAGNNNCTG 1 cut(s) 329
PsuI RGATCY 2 cut(s) 968, 1245
RsaI GTAC 4 cut(s) 598, 644, 844, 1117
RsaNI GTAC 4 cut(s) 597, 643, 843, 1116
SatI GCNGC 2 cut(s) 145, 226
Sau3AI GATC 5 cut(s) 268, 393, 535, 968, 1245
Sau96I GGNCC 4 cut(s) 6, 166, 542, 721
ScaI AGTACT 1 cut(s) 844
SchI GAGTC 1 cut(s) 31
ScrFI CCNGG 1 cut(s) 1260
SfaNI GCATC 7 cut(s) 105, 301, 310, 473, 698, 1108, 1131
SfcI CTRYAG 1 cut(s) 1083
Sfr274I CTCGAG 1 cut(s) 363
SinI GGWCC 3 cut(s) 6, 166, 542
SlaI CTCGAG 1 cut(s) 363
SmlI CTYRAG 2 cut(s) 363, 838
SmoI CTYRAG 2 cut(s) 363, 838
SpeI ACTAGT 1 cut(s) 286
Sse9I AATT 8 cut(s) 64, 781, 828, 958, 978, 1157, 1291, 1350
SseBI AGGCCT 1 cut(s) 1324
SsiI CCGC 1 cut(s) 912
SspI AATATT 1 cut(s) 932
SspMI CTAG 3 cut(s) 14, 29, 287
StuI AGGCCT 1 cut(s) 1324
StyD4I CCNGG 1 cut(s) 1258
StyI CCWWGG 1 cut(s) 1094
TaaI ACNGT 2 cut(s) 601, 1061
TaiI ACGT 1 cut(s) 1216
TaqI TCGA 3 cut(s) 364, 538, 1071
TaqII GACCGA 1 cut(s) 43
TasI AATT 8 cut(s) 64, 781, 828, 958, 978, 1157, 1291, 1350
TatI WGTACW 1 cut(s) 842
TfiI GAWTC 2 cut(s) 1066, 1202
TscAI CASTG 1 cut(s) 1066
TseI GCWGC 2 cut(s) 144, 225
TspDTI ATGAA 4 cut(s) 541, 622, 717, 1263
TspGWI ACGGA 1 cut(s) 772
TspRI CASTG 1 cut(s) 1066
Van91I CCANNNNNTGG 1 cut(s) 750
VpaK11BI GGWCC 3 cut(s) 6, 166, 542
VspI ATTAAT 1 cut(s) 831
XapI RAATTY 2 cut(s) 64, 1157
XceI RCATGY 1 cut(s) 446
XhoI CTCGAG 1 cut(s) 363
XmiI GTMKAC 1 cut(s) 1238
XmnI GAANNNNTTC 1 cut(s) 66
XspI CTAG 3 cut(s) 14, 29, 287
ZrmI AGTACT 1 cut(s) 844
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.