RchiOBHm_Chr3g0480281

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000125
Physical Location & Seq
Reverse (-)
26017000 .. 26020644
3645 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ44530

Sequence Viewer

Length: 1245 bp
ATGCTGAGAACGAAACGAATGAGCCGGTGCAGCAACAATGCAAAGTTGGTGGACCTACCCATTGATATCCTCATCAACATCCTTTTGAGACTGCCGGCAAAATCACTTTGCTGCACACAATGTGTCTGTAAAACCCTGCTTCACATAGTTGAAGCTCGTTCCTTTGCAACACTAGTGCATCTGCGCTTGCTTAATACTGCTTCCGATGCAGTCGCTGAAGTGCCTCAACTTTTGCTTCTTAATGTTGCCCGAGATGGTGACAATGGAAGCTTAATAACTATCTCTCCATCGCAGATATATGATGGCAATGTCTTGACAAAAAGCAGACATGCCATTGTCTCAAAGATTGCATCCTACCGATATGGTTACAATGTTGGTTTTGTTTTCTGCAACTTGTTCTTCTTTAATGACAAAAGGTATGATCGAGGTCCATGCTTCATTTTCAACCCTCTCAGGGGAGAAGTTCTCATGCTCCCAAAGAGTACCGTCCAAGTTCCACCTTTTAGAAATATGATATTCATAGATTGGTACGGCATGGGGTTTGATGATATAACCAACACCTACAAGATTGTTCGTGTTTCCGGAAATGAACGATGCTGTTTGGTGGCCCAAGTTTATATATTAGGCACCAGCTCTTGGAAACGGATAAGCTCAGTTCCTCCATGTAATTTAAGCACAAAAAAAATATCTGCATATGGAGACCTGCATTGGTTAATTAATCGCTCAAGTACTAGAGGACAAATCTGCATAGTTTCTTTTGACTTCGAGAAGGAGGAGTTCTATTTGACGCCTCATCCCGCATTAAGAAAGCCAGAATATTCTTTCTTGTCCCTTCACTTTGTTAATTTGAGAGGATCTATGGCAATTGTTGATACTTCATCACATACACATATTGACATATGGGTTTTGAAGAGTTATGAGAAGAAAGAGTGGGTGCGAGATTACAGCGTGAATCTCGAACTGCCTGGTGTAGAGCGTCCTTGGCATCTTGACCGGTGTGGTACTTGCATCGGTGAGTGGGAGAATGGCATATTTTTCGTAGAATTTTATGTTACTACTAACGCATTCTTTGTGGATACAAGATGTGATTCTGTGAAACGTGTATCACTTGGAGGTTCAGAGTATACGAGGATCTTCAGCTATCCTGGGAGTTTGATTTCATTAAAAGATTATGGCAATTTGATTAGAGCAGAAGCAGGTAACTGGAGGCCTGATTTCTCTGAAAAGTCTTGGCAAATTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

414

Amino Acids

47.35

Weight (kDa)

8.75

Isoelectric Point (pI)

29.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 17 - 52 4.4e-08 F-box domain
FBA_3 PF08268 105 - 374 7e-25 F-box associated beta propeller domain
FBA_1 PF07734 142 - 387 1.9e-17 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 711, 1187
AccB1I GGYRCC 1 cut(s) 626
AccB7I CCANNNNNTGG 1 cut(s) 636
AccI GTMKAC 1 cut(s) 1124
AccIII TCCGGA 1 cut(s) 581
AciI CCGC 1 cut(s) 798
AclWI GGATC 2 cut(s) 862, 1139
AcsI RAATTY 1 cut(s) 1043
AcuI CTGAAG 2 cut(s) 237, 1120
AcyI GRCGYC 1 cut(s) 788
AdeI CACNNNGTG 1 cut(s) 122
AfaI GTAC 4 cut(s) 484, 530, 730, 1003
AfiI CCNNNNNNNGG 3 cut(s) 454, 455, 636
AflIII ACRYGT 1 cut(s) 1099
AgeI ACCGGT 1 cut(s) 993
AgsI TTSAA 3 cut(s) 152, 445, 910
AhlI ACTAGT 1 cut(s) 172
AjnI CCWGG 2 cut(s) 964, 1144
AluBI AGCT 5 cut(s) 155, 270, 633, 651, 1140
AluI AGCT 5 cut(s) 155, 270, 633, 651, 1140
Alw26I GTCTC 3 cut(s) 82, 343, 693
AlwI GGATC 2 cut(s) 862, 1139
AlwNI CAGNNNCTG 1 cut(s) 215
Ama87I CYCGRG 1 cut(s) 249
Aor13HI TCCGGA 1 cut(s) 581
AoxI GGCC 2 cut(s) 606, 1208
ApeKI GCWGC 2 cut(s) 30, 111
ApoI RAATTY 1 cut(s) 1043
AseI ATTAAT 1 cut(s) 717
AsiGI ACCGGT 1 cut(s) 993
AspLEI GCGC 1 cut(s) 186
AspS9I GGNCC 3 cut(s) 52, 428, 607
AsuHPI GGTGA 2 cut(s) 269, 1025
AvaI CYCGRG 1 cut(s) 249
AvaII GGWCC 2 cut(s) 52, 428
BanI GGYRCC 1 cut(s) 626
BbvI GCAGC 2 cut(s) 42, 98
BccI CCATC 3 cut(s) 248, 295, 296
BceAI ACGGC 1 cut(s) 547
BcgI CGANNNNNNTGC 4 cut(s) 414, 448, 1018, 1052
BciT130I CCWGG 2 cut(s) 966, 1146
BciVI GTATCC 1 cut(s) 1069
BcoDI GTCTC 3 cut(s) 82, 343, 693
BcuI ACTAGT 1 cut(s) 172
BfaI CTAG 2 cut(s) 173, 732
BfuAI ACCTGC 2 cut(s) 711, 1187
BfuI GTATCC 1 cut(s) 1069
BisI GCNGC 2 cut(s) 31, 112
BlsI GCNGC 2 cut(s) 32, 113
BmcAI AGTACT 1 cut(s) 730
Bme1390I CCNGG 2 cut(s) 966, 1146
Bme18I GGWCC 2 cut(s) 52, 428
BmeT110I CYCGRG 1 cut(s) 249
BmgT120I GGNCC 3 cut(s) 52, 428, 607
BmiI GGNNCC 1 cut(s) 628
BmrFI CCNGG 2 cut(s) 966, 1146
BmsI GCATC 6 cut(s) 187, 196, 359, 584, 994, 1017
BplI GAGNNNNNCTC 2 cut(s) 450, 482
BpmI CTGGAG 1 cut(s) 1225
BpuEI CTTGAG 1 cut(s) 709
BsaHI GRCGYC 1 cut(s) 788
BsaI GGTCTC 1 cut(s) 693
BsaJI CCNNGG 2 cut(s) 980, 1145
BsaWI WCCGGW 2 cut(s) 581, 993
BsaXI ACNNNNNCTCC 2 cut(s) 268, 298
Bsc4I CCNNNNNNNGG 3 cut(s) 454, 455, 636
Bse118I RCCGGY 3 cut(s) 24, 94, 993
Bse1I ACTGG 1 cut(s) 1208
Bse3DI GCAATG 1 cut(s) 313
BseAI TCCGGA 1 cut(s) 581
BseBI CCWGG 2 cut(s) 966, 1146
BseDI CCNNGG 2 cut(s) 980, 1145
BseGI GGATG 3 cut(s) 78, 350, 793
BseLI CCNNNNNNNGG 3 cut(s) 454, 455, 636
BseMI GCAATG 1 cut(s) 313
BseMII CTCAG 2 cut(s) 466, 666
BseNI ACTGG 1 cut(s) 1208
BseRI GAGGAG 1 cut(s) 788
BseXI GCAGC 2 cut(s) 42, 98
BsgI GTGCAG 2 cut(s) 49, 97
BshFI GGCC 2 cut(s) 608, 1210
BshNI GGYRCC 1 cut(s) 626
BshTI ACCGGT 1 cut(s) 993
BsiHKCI CYCGRG 1 cut(s) 249
BsiSI CCGG 4 cut(s) 25, 95, 582, 994
BslFI GGGAC 1 cut(s) 814
BslI CCNNNNNNNGG 3 cut(s) 454, 455, 636
BsmAI GTCTC 3 cut(s) 82, 343, 693
BsmFI GGGAC 1 cut(s) 814
BsmI GAATGC 1 cut(s) 1064
BsnI GGCC 2 cut(s) 608, 1210
Bso31I GGTCTC 1 cut(s) 693
BsoBI CYCGRG 1 cut(s) 249
Bsp13I TCCGGA 1 cut(s) 581
Bsp143I GATC 3 cut(s) 421, 854, 1131
BspACI CCGC 1 cut(s) 798
BspANI GGCC 2 cut(s) 608, 1210
BspCNI CTCAG 2 cut(s) 465, 665
BspEI TCCGGA 1 cut(s) 581
BspLI GGNNCC 1 cut(s) 628
BspMI ACCTGC 2 cut(s) 711, 1187
BspPI GGATC 2 cut(s) 862, 1139
BspT107I GGYRCC 1 cut(s) 626
BspTNI GGTCTC 1 cut(s) 693
BsrDI GCAATG 1 cut(s) 313
BsrFI RCCGGY 3 cut(s) 24, 94, 993
BsrI ACTGG 1 cut(s) 1208
BssAI RCCGGY 3 cut(s) 24, 94, 993
BssECI CCNNGG 2 cut(s) 980, 1145
BssMI GATC 3 cut(s) 421, 854, 1131
BssNAI GTATAC 1 cut(s) 1125
BssNI GRCGYC 1 cut(s) 788
BssT1I CCWWGG 1 cut(s) 980
Bst1107I GTATAC 1 cut(s) 1125
Bst2UI CCWGG 2 cut(s) 966, 1146
Bst4CI ACNGT 1 cut(s) 487
Bst6I CTCTTC 1 cut(s) 905
BstACI GRCGYC 1 cut(s) 788
BstC8I GCNNGC 2 cut(s) 96, 188
BstDEI CTNAG 3 cut(s) 5, 452, 652
BstF5I GGATG 3 cut(s) 78, 350, 793
BstHHI GCGC 1 cut(s) 186
BstKTI GATC 3 cut(s) 424, 857, 1134
BstMAI GTCTC 3 cut(s) 82, 343, 693
BstMBI GATC 3 cut(s) 421, 854, 1131
BstMWI GCNNNNNNNGC 3 cut(s) 30, 206, 982
BstNI CCWGG 2 cut(s) 966, 1146
BstNSI RCATGY 1 cut(s) 332
BstSCI CCNGG 2 cut(s) 964, 1144
BstV1I GCAGC 2 cut(s) 42, 98
BstX2I RGATCY 2 cut(s) 854, 1131
BstYI RGATCY 2 cut(s) 854, 1131
BstZ17I GTATAC 1 cut(s) 1125
BsuI GTATCC 1 cut(s) 1069
BsuRI GGCC 2 cut(s) 608, 1210
BtgZI GCGATG 1 cut(s) 273
BtsCI GGATG 3 cut(s) 78, 350, 793
BveI ACCTGC 2 cut(s) 711, 1187
Cac8I GCNNGC 2 cut(s) 96, 188
CaiI CAGNNNCTG 1 cut(s) 215
CfoI GCGC 1 cut(s) 186
Cfr10I RCCGGY 3 cut(s) 24, 94, 993
Cfr13I GGNCC 3 cut(s) 52, 428, 607
CseI GACGC 2 cut(s) 796, 965
Csp6I GTAC 4 cut(s) 483, 529, 729, 1002
CspAI ACCGGT 1 cut(s) 993
CspCI CAANNNNNGTGG 2 cut(s) 30, 65
CviAII CATG 5 cut(s) 329, 432, 469, 535, 663
CviJI RGCY 9 cut(s) 24, 155, 270, 608, 633, 651, 811, 1140, 1210
CviKI_1 RGCY 9 cut(s) 24, 155, 270, 608, 633, 651, 811, 1140, 1210
CviQI GTAC 4 cut(s) 483, 529, 729, 1002
DdeI CTNAG 3 cut(s) 5, 452, 652
DpnI GATC 3 cut(s) 423, 856, 1133
DpnII GATC 3 cut(s) 421, 854, 1131
DraIII CACNNNGTG 1 cut(s) 122
Eam1104I CTCTTC 1 cut(s) 905
EarI CTCTTC 1 cut(s) 905
Eco130I CCWWGG 1 cut(s) 980
Eco147I AGGCCT 1 cut(s) 1210
Eco31I GGTCTC 1 cut(s) 693
Eco32I GATATC 1 cut(s) 67
Eco47I GGWCC 2 cut(s) 52, 428
Eco57I CTGAAG 2 cut(s) 237, 1120
Eco88I CYCGRG 1 cut(s) 249
EcoRII CCWGG 2 cut(s) 964, 1144
EcoRV GATATC 1 cut(s) 67
EcoT14I CCWWGG 1 cut(s) 980
ErhI CCWWGG 1 cut(s) 980
FaeI CATG 5 cut(s) 332, 435, 472, 538, 666
FaqI GGGAC 1 cut(s) 814
FatI CATG 5 cut(s) 328, 431, 468, 534, 662
FauI CCCGC 1 cut(s) 805
FauNDI CATATG 2 cut(s) 694, 899
FblI GTMKAC 1 cut(s) 1124
Fnu4HI GCNGC 2 cut(s) 31, 112
FokI GGATG 3 cut(s) 65, 337, 780
Fsp4HI GCNGC 2 cut(s) 31, 112
FspBI CTAG 2 cut(s) 173, 732
GlaI GCGC 1 cut(s) 185
GluI GCNGC 2 cut(s) 31, 112
GsuI CTGGAG 1 cut(s) 1225
HaeIII GGCC 2 cut(s) 608, 1210
HapII CCGG 4 cut(s) 25, 95, 582, 994
HgaI GACGC 2 cut(s) 796, 965
HhaI GCGC 1 cut(s) 186
Hin1I GRCGYC 1 cut(s) 788
Hin1II CATG 5 cut(s) 332, 435, 472, 538, 666
Hin6I GCGC 1 cut(s) 184
HinP1I GCGC 1 cut(s) 184
HindIII AAGCTT 1 cut(s) 268
HinfI GANTC 2 cut(s) 952, 1088
HpaII CCGG 4 cut(s) 25, 95, 582, 994
HphI GGTGA 2 cut(s) 269, 1025
Hpy166II GTNNAC 2 cut(s) 52, 1125
Hpy188I TCNGA 3 cut(s) 205, 1120, 1222
Hpy188III TCNNGA 5 cut(s) 313, 582, 766, 956, 989
Hpy8I GTNNAC 2 cut(s) 52, 1125
HpyAV CCTTC 2 cut(s) 763, 842
HpyCH4III ACNGT 1 cut(s) 487
HpyCH4IV ACGT 1 cut(s) 1099
HpyF10VI GCNNNNNNNGC 3 cut(s) 30, 206, 982
HpyF3I CTNAG 3 cut(s) 5, 452, 652
HpySE526I ACGT 1 cut(s) 1099
Hsp92I GRCGYC 1 cut(s) 788
Hsp92II CATG 5 cut(s) 332, 435, 472, 538, 666
HspAI GCGC 1 cut(s) 184
Kpn2I TCCGGA 1 cut(s) 581
KroI GCCGGC 1 cut(s) 94
KroNI GCCGGC 1 cut(s) 96
Kzo9I GATC 3 cut(s) 421, 854, 1131
LmnI GCTCC 1 cut(s) 477
Lsp1109I GCAGC 2 cut(s) 42, 98
LweI GCATC 6 cut(s) 187, 196, 359, 584, 994, 1017
MaeI CTAG 2 cut(s) 173, 732
MaeII ACGT 1 cut(s) 1099
MaeIII GTNAC 4 cut(s) 257, 365, 1051, 1199
MalI GATC 3 cut(s) 423, 856, 1133
MboI GATC 3 cut(s) 421, 854, 1131
MboII GAAGA 4 cut(s) 391, 922, 934, 1126
MfeI CAATTG 1 cut(s) 864
MflI RGATCY 2 cut(s) 854, 1131
MluCI AATT 7 cut(s) 667, 714, 844, 864, 1043, 1177, 1236
MroI TCCGGA 1 cut(s) 581
MroNI GCCGGC 1 cut(s) 94
MspI CCGG 4 cut(s) 25, 95, 582, 994
MspR9I CCNGG 2 cut(s) 966, 1146
MunI CAATTG 1 cut(s) 864
Mva1269I GAATGC 1 cut(s) 1064
MvaI CCWGG 2 cut(s) 966, 1146
MwoI GCNNNNNNNGC 3 cut(s) 30, 206, 982
NaeI GCCGGC 1 cut(s) 96
NdeI CATATG 2 cut(s) 694, 899
NdeII GATC 3 cut(s) 421, 854, 1131
NgoMIV GCCGGC 1 cut(s) 94
NlaIII CATG 5 cut(s) 332, 435, 472, 538, 666
NlaIV GGNNCC 1 cut(s) 628
NmuCI GTSAC 1 cut(s) 257
NspI RCATGY 1 cut(s) 332
PacI TTAATTAA 1 cut(s) 717
PceI AGGCCT 1 cut(s) 1210
PctI GAATGC 1 cut(s) 1064
PdiI GCCGGC 1 cut(s) 96
PfeI GAWTC 2 cut(s) 952, 1088
PflMI CCANNNNNTGG 1 cut(s) 636
PinAI ACCGGT 1 cut(s) 993
PkrI GCNGC 2 cut(s) 32, 113
PshBI ATTAAT 1 cut(s) 717
Psp6I CCWGG 2 cut(s) 964, 1144
PspGI CCWGG 2 cut(s) 964, 1144
PspN4I GGNNCC 1 cut(s) 628
PspPI GGNCC 3 cut(s) 52, 428, 607
PstNI CAGNNNCTG 1 cut(s) 215
PsuI RGATCY 2 cut(s) 854, 1131
RsaI GTAC 4 cut(s) 484, 530, 730, 1003
RsaNI GTAC 4 cut(s) 483, 529, 729, 1002
SatI GCNGC 2 cut(s) 31, 112
Sau3AI GATC 3 cut(s) 421, 854, 1131
Sau96I GGNCC 3 cut(s) 52, 428, 607
ScaI AGTACT 1 cut(s) 730
ScrFI CCNGG 2 cut(s) 966, 1146
SfaNI GCATC 6 cut(s) 187, 196, 359, 584, 994, 1017
SinI GGWCC 2 cut(s) 52, 428
SmlI CTYRAG 1 cut(s) 724
SmoI CTYRAG 1 cut(s) 724
SpeI ACTAGT 1 cut(s) 172
Sse9I AATT 7 cut(s) 667, 714, 844, 864, 1043, 1177, 1236
SseBI AGGCCT 1 cut(s) 1210
SsiI CCGC 1 cut(s) 798
SspI AATATT 1 cut(s) 818
SspMI CTAG 2 cut(s) 173, 732
StuI AGGCCT 1 cut(s) 1210
StyD4I CCNGG 2 cut(s) 964, 1144
StyI CCWWGG 1 cut(s) 980
TaaI ACNGT 1 cut(s) 487
TaiI ACGT 1 cut(s) 1102
TaqI TCGA 3 cut(s) 424, 765, 957
TasI AATT 7 cut(s) 667, 714, 844, 864, 1043, 1177, 1236
TatI WGTACW 1 cut(s) 728
TfiI GAWTC 2 cut(s) 952, 1088
TseFI GTSAC 1 cut(s) 257
TseI GCWGC 2 cut(s) 30, 111
Tsp45I GTSAC 1 cut(s) 257
TspDTI ATGAA 5 cut(s) 427, 508, 603, 867, 1149
TspGWI ACGGA 1 cut(s) 658
Van91I CCANNNNNTGG 1 cut(s) 636
VpaK11BI GGWCC 2 cut(s) 52, 428
VspI ATTAAT 1 cut(s) 717
XapI RAATTY 1 cut(s) 1043
XceI RCATGY 1 cut(s) 332
XmiI GTMKAC 1 cut(s) 1124
XspI CTAG 2 cut(s) 173, 732
ZrmI AGTACT 1 cut(s) 730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.