FvH4_6g45801

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000125
Physical Location & Seq
Forward (+)
35079863 .. 35081229
1367 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g45801.t1

Sequence Viewer

Length: 1200 bp
ATGGAGATTGCAAGGACTAAGCAGGATGTGTCCAGCAGTAGCCACAGCTCAAAGCACTTCCCTACTGAAATCCTCCTCAACATCCTTTCTCGAGTGCCAGCAAAATCTCTTTTTCGCTTTCGATGCGTCTCTAAGCTTTTCTGTAAGCTAATTAACGACTCCTCTCTAGCTGCAATGCATCTTCATCACACCGATATGATTGAGGAGCCATCTCTAGTCATGGTTCATTCTAGGTCTGCATCCAAATATTCCACATTAATGATGGTTCCCATAATTGTTTCCCCGTATTCCGAATTATCCTTTTATGATGGTAGTTTCTCTTCGGGGCTTTTGTCCATTGAAACTAAATATGAGCTAGAGTTTGCTTCCGGTGGCTTGCTTTGCTTTAAGGACTCTAGTAAATCAAGAGGTCCTGCCCTATTGTGCGATCCACTTAGGGGAGAAGCTATAGAACTCCCACTCCCACATTGTAATGTCAATGCATTGTACCGCTGGGAAGAGTGGTACGGTTTAGGGGTGGATGCCACTACCAGCATCTACCGGATTGTTAATGTTGTTTTCAGGATTGATCCTCGTTCATATGTTGTCCATGTTCATGTCTTGGGAACAAGCACTTGGAAACAGATATCCGCAGTTCCACCTTGTGGTCTAAGTAAGCAGAACGCATTTGCACATGGAAACACATATTGGTTGATTGGAGAACGTATACTATCTTTCGACTTCAATGAAGAGAAGTTCATATGGATCCCTCAACCCAACTTACCCTCTAATAGGGTTCTTCACTTGTTTAATTTGAAAGGATCTCTAGCCATTGTCGATGCTACTTCAGTATTAGTTACCGAAGTTGTGGTATGGGTATTGAAAAGTGATGATACGAAAGAATTTTGGGTAAAGGACTACAACATAAAACTCAATGCTGGTCCATGTCATTGTAATGAATGGTGGCCTCTCAATTGTTTTGTTCTTGTTGATGATTCCAGTAGTAGAAAATGCATTGTGGGTGTGCTCCATTACAATCTACGGTGGGGTTCTAGGAAACGCTTTCGTTATGGGAATGGAAGAGTTGAAGGGAATTTCGTCCCCAAGATCTTCAGTTATACCGGAAGCCTGGTTTCTCTTAAAGATTATGGCAAGTTATTGGTAGAAGGATCCAAGGCAGATCAATCAAAAGCTTGGTTATCCGGGAATGCCATCAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

400

Amino Acids

44.98

Weight (kDa)

8.69

Isoelectric Point (pI)

40.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 20 - 55 1.9e-09 F-box domain
F-box-like PF12937 21 - 56 1.2e-07 F-box-like
FBA_3 PF08268 124 - 299 5.2e-14 F-box associated beta propeller domain
FBA_1 PF07734 163 - 307 2.6e-10 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 644
AccI GTMKAC 1 cut(s) 706
AciI CCGC 2 cut(s) 490, 630
AclWI GGATC 7 cut(s) 422, 563, 739, 752, 808, 1143, 1156
AcsI RAATTY 2 cut(s) 881, 1072
AcuI CTGAAG 2 cut(s) 810, 1075
AdeI CACNNNGTG 1 cut(s) 644
AfaI GTAC 2 cut(s) 488, 506
AfiI CCNNNNNNNGG 3 cut(s) 437, 644, 771
AgsI TTSAA 5 cut(s) 341, 724, 796, 862, 1067
AjnI CCWGG 1 cut(s) 1107
AjuI GAANNNNNNNTTGG 4 cut(s) 598, 630, 670, 702
AloI GAACNNNNNNTCC 2 cut(s) 444, 476
AluBI AGCT 7 cut(s) 48, 136, 148, 170, 355, 446, 1172
AluI AGCT 7 cut(s) 48, 136, 148, 170, 355, 446, 1172
Alw21I GWGCWC 1 cut(s) 1008
Alw26I GTCTC 1 cut(s) 133
AlwI GGATC 7 cut(s) 422, 563, 739, 752, 808, 1143, 1156
Ama87I CYCGRG 1 cut(s) 90
AoxI GGCC 1 cut(s) 944
ApeKI GCWGC 1 cut(s) 170
ApoI RAATTY 2 cut(s) 881, 1072
AseI ATTAAT 1 cut(s) 257
AspS9I GGNCC 2 cut(s) 410, 920
AsuC2I CCSGG 1 cut(s) 1183
AvaI CYCGRG 1 cut(s) 90
AvaII GGWCC 2 cut(s) 410, 920
BamHI GGATCC 2 cut(s) 744, 1148
BarI GAAGNNNNNNTAC 2 cut(s) 304, 336
Bbv12I GWGCWC 1 cut(s) 1008
BbvI GCAGC 1 cut(s) 157
BccI CCATC 4 cut(s) 217, 256, 302, 1199
BciT130I CCWGG 1 cut(s) 1109
BcnI CCSGG 1 cut(s) 1183
BcoDI GTCTC 1 cut(s) 133
BfaI CTAG 7 cut(s) 167, 215, 231, 356, 396, 806, 1032
BfmI CTRYAG 1 cut(s) 447
BglII AGATCT 1 cut(s) 1086
BisI GCNGC 1 cut(s) 171
BlsI GCNGC 1 cut(s) 172
Bme1390I CCNGG 2 cut(s) 1109, 1183
Bme18I GGWCC 2 cut(s) 410, 920
BmeT110I CYCGRG 1 cut(s) 90
BmgT120I GGNCC 2 cut(s) 410, 920
BmiI GGNNCC 4 cut(s) 207, 267, 746, 1150
BmrFI CCNGG 2 cut(s) 1109, 1183
BmsI GCATC 6 cut(s) 113, 187, 248, 511, 543, 808
BpuMI CCSGG 1 cut(s) 1183
BsaJI CCNNGG 1 cut(s) 1152
BsaWI WCCGGW 3 cut(s) 368, 540, 1100
BsaXI ACNNNNNCTCC 2 cut(s) 444, 474
Bsc4I CCNNNNNNNGG 3 cut(s) 437, 644, 771
Bse1I ACTGG 1 cut(s) 978
Bse3DI GCAATG 1 cut(s) 180
BseBI CCWGG 1 cut(s) 1109
BseDI CCNNGG 1 cut(s) 1152
BseGI GGATG 4 cut(s) 31, 81, 239, 526
BseLI CCNNNNNNNGG 3 cut(s) 437, 644, 771
BseMI GCAATG 1 cut(s) 180
BseNI ACTGG 1 cut(s) 978
BseRI GAGGAG 3 cut(s) 65, 151, 218
BseXI GCAGC 1 cut(s) 157
BseYI CCCAGC 1 cut(s) 492
BshFI GGCC 1 cut(s) 946
BsiHKAI GWGCWC 1 cut(s) 1008
BsiHKCI CYCGRG 1 cut(s) 90
BsiSI CCGG 4 cut(s) 369, 541, 1101, 1182
BslFI GGGAC 1 cut(s) 1064
BslI CCNNNNNNNGG 3 cut(s) 437, 644, 771
BsmAI GTCTC 1 cut(s) 133
BsmBI CGTCTC 1 cut(s) 133
BsmFI GGGAC 1 cut(s) 1064
BsmI GAATGC 1 cut(s) 1192
BsnI GGCC 1 cut(s) 946
BsoBI CYCGRG 1 cut(s) 90
Bsp1286I GDGCHC 1 cut(s) 1008
Bsp143I GATC 7 cut(s) 427, 568, 744, 800, 1086, 1148, 1159
BspACI CCGC 2 cut(s) 490, 630
BspANI GGCC 1 cut(s) 946
BspLI GGNNCC 4 cut(s) 207, 267, 746, 1150
BspPI GGATC 7 cut(s) 422, 563, 739, 752, 808, 1143, 1156
BsrDI GCAATG 1 cut(s) 180
BsrI ACTGG 1 cut(s) 978
BssECI CCNNGG 1 cut(s) 1152
BssMI GATC 7 cut(s) 427, 568, 744, 800, 1086, 1148, 1159
BssNAI GTATAC 1 cut(s) 707
BssT1I CCWWGG 1 cut(s) 1152
Bst1107I GTATAC 1 cut(s) 707
Bst2UI CCWGG 1 cut(s) 1109
Bst4CI ACNGT 2 cut(s) 509, 1023
Bst6I CTCTTC 4 cut(s) 325, 492, 723, 1054
BstC8I GCNNGC 2 cut(s) 99, 377
BstDEI CTNAG 4 cut(s) 18, 132, 434, 650
BstENI CCTNNNNNAGG 1 cut(s) 769
BstF5I GGATG 4 cut(s) 31, 81, 239, 526
BstKTI GATC 7 cut(s) 430, 571, 747, 803, 1089, 1151, 1162
BstMAI GTCTC 1 cut(s) 133
BstMBI GATC 7 cut(s) 427, 568, 744, 800, 1086, 1148, 1159
BstMWI GCNNNNNNNGC 2 cut(s) 123, 381
BstNI CCWGG 1 cut(s) 1109
BstSCI CCNGG 2 cut(s) 1107, 1181
BstSFI CTRYAG 1 cut(s) 447
BstV1I GCAGC 1 cut(s) 157
BstX2I RGATCY 4 cut(s) 744, 800, 1086, 1148
BstYI RGATCY 4 cut(s) 744, 800, 1086, 1148
BstZ17I GTATAC 1 cut(s) 707
BsuRI GGCC 1 cut(s) 946
BtsCI GGATG 4 cut(s) 31, 81, 239, 526
Cac8I GCNNGC 2 cut(s) 99, 377
Cfr13I GGNCC 2 cut(s) 410, 920
CseI GACGC 1 cut(s) 115
Csp6I GTAC 2 cut(s) 487, 505
CviAII CATG 5 cut(s) 220, 590, 596, 674, 924
CviQI GTAC 2 cut(s) 487, 505
DdeI CTNAG 4 cut(s) 18, 132, 434, 650
DpnI GATC 7 cut(s) 429, 570, 746, 802, 1088, 1150, 1161
DpnII GATC 7 cut(s) 427, 568, 744, 800, 1086, 1148, 1159
DraIII CACNNNGTG 1 cut(s) 644
Eam1104I CTCTTC 4 cut(s) 325, 492, 723, 1054
EarI CTCTTC 4 cut(s) 325, 492, 723, 1054
Eco130I CCWWGG 1 cut(s) 1152
Eco32I GATATC 1 cut(s) 627
Eco47I GGWCC 2 cut(s) 410, 920
Eco57I CTGAAG 2 cut(s) 810, 1075
Eco88I CYCGRG 1 cut(s) 90
EcoNI CCTNNNNNAGG 1 cut(s) 769
EcoO109I RGGNCCY 1 cut(s) 410
EcoRII CCWGG 1 cut(s) 1107
EcoRV GATATC 1 cut(s) 627
EcoT14I CCWWGG 1 cut(s) 1152
EcoT22I ATGCAT 3 cut(s) 180, 484, 995
ErhI CCWWGG 1 cut(s) 1152
Esp3I CGTCTC 1 cut(s) 133
FaeI CATG 5 cut(s) 223, 593, 599, 677, 927
FaqI GGGAC 1 cut(s) 1064
FatI CATG 5 cut(s) 219, 589, 595, 673, 923
FauNDI CATATG 2 cut(s) 580, 740
FblI GTMKAC 1 cut(s) 706
Fnu4HI GCNGC 1 cut(s) 171
FokI GGATG 4 cut(s) 38, 68, 226, 533
Fsp4HI GCNGC 1 cut(s) 171
FspBI CTAG 7 cut(s) 167, 215, 231, 356, 396, 806, 1032
GluI GCNGC 1 cut(s) 171
GsaI CCCAGC 1 cut(s) 496
HaeIII GGCC 1 cut(s) 946
HapII CCGG 4 cut(s) 369, 541, 1101, 1182
HgaI GACGC 1 cut(s) 115
Hin1II CATG 5 cut(s) 223, 593, 599, 677, 927
HindIII AAGCTT 2 cut(s) 134, 1170
HinfI GANTC 3 cut(s) 158, 392, 974
HpaII CCGG 4 cut(s) 369, 541, 1101, 1182
Hpy166II GTNNAC 1 cut(s) 707
Hpy188I TCNGA 1 cut(s) 292
Hpy188III TCNNGA 3 cut(s) 90, 405, 562
Hpy8I GTNNAC 1 cut(s) 707
HpyAV CCTTC 2 cut(s) 1061, 1139
HpyCH4III ACNGT 2 cut(s) 509, 1023
HpyCH4IV ACGT 1 cut(s) 703
HpyCH4V TGCA 7 cut(s) 11, 173, 178, 239, 482, 671, 993
HpyF10VI GCNNNNNNNGC 2 cut(s) 123, 381
HpyF3I CTNAG 4 cut(s) 18, 132, 434, 650
HpySE526I ACGT 1 cut(s) 703
Hsp92II CATG 5 cut(s) 223, 593, 599, 677, 927
Kzo9I GATC 7 cut(s) 427, 568, 744, 800, 1086, 1148, 1159
LmnI GCTCC 2 cut(s) 205, 1011
Lsp1109I GCAGC 1 cut(s) 157
LweI GCATC 6 cut(s) 113, 187, 248, 511, 543, 808
MaeI CTAG 7 cut(s) 167, 215, 231, 356, 396, 806, 1032
MaeII ACGT 1 cut(s) 703
MaeIII GTNAC 1 cut(s) 835
MalI GATC 7 cut(s) 429, 570, 746, 802, 1088, 1150, 1161
MboI GATC 7 cut(s) 427, 568, 744, 800, 1086, 1148, 1159
MboII GAAGA 7 cut(s) 173, 312, 509, 740, 770, 1071, 1081
MfeI CAATTG 1 cut(s) 952
MflI RGATCY 4 cut(s) 744, 800, 1086, 1148
MhlI GDGCHC 1 cut(s) 1008
MluCI AATT 7 cut(s) 150, 273, 293, 790, 881, 952, 1072
MlyI GAGTC 2 cut(s) 152, 386
MnlI CCTC 9 cut(s) 83, 86, 172, 196, 401, 582, 759, 775, 957
Mph1103I ATGCAT 3 cut(s) 180, 484, 995
MseI TTAA 6 cut(s) 153, 257, 387, 549, 789, 1119
MslI CAYNNNNRTG 5 cut(s) 194, 257, 471, 594, 933
MspA1I CMGCKG 1 cut(s) 492
MspI CCGG 4 cut(s) 369, 541, 1101, 1182
MspR9I CCNGG 2 cut(s) 1109, 1183
MunI CAATTG 1 cut(s) 952
Mva1269I GAATGC 1 cut(s) 1192
MvaI CCWGG 1 cut(s) 1109
MwoI GCNNNNNNNGC 2 cut(s) 123, 381
NciI CCSGG 1 cut(s) 1183
NdeI CATATG 2 cut(s) 580, 740
NdeII GATC 7 cut(s) 427, 568, 744, 800, 1086, 1148, 1159
NlaIII CATG 5 cut(s) 223, 593, 599, 677, 927
NlaIV GGNNCC 4 cut(s) 207, 267, 746, 1150
NsiI ATGCAT 3 cut(s) 180, 484, 995
PaeR7I CTCGAG 1 cut(s) 90
PctI GAATGC 1 cut(s) 1192
PfeI GAWTC 1 cut(s) 974
PflMI CCANNNNNTGG 1 cut(s) 644
PfoI TCCNGGA 1 cut(s) 1181
PkrI GCNGC 1 cut(s) 172
PleI GAGTC 2 cut(s) 152, 386
PpsI GAGTC 2 cut(s) 152, 386
PpuMI RGGWCCY 1 cut(s) 410
PshBI ATTAAT 1 cut(s) 257
Psp5II RGGWCCY 1 cut(s) 410
Psp6I CCWGG 1 cut(s) 1107
PspFI CCCAGC 1 cut(s) 492
PspGI CCWGG 1 cut(s) 1107
PspN4I GGNNCC 4 cut(s) 207, 267, 746, 1150
PspPI GGNCC 2 cut(s) 410, 920
PspPPI RGGWCCY 1 cut(s) 410
PsuI RGATCY 4 cut(s) 744, 800, 1086, 1148
RsaI GTAC 2 cut(s) 488, 506
RsaNI GTAC 2 cut(s) 487, 505
RseI CAYNNNNRTG 5 cut(s) 194, 257, 471, 594, 933
SaqAI TTAA 6 cut(s) 153, 257, 387, 549, 789, 1119
SatI GCNGC 1 cut(s) 171
Sau3AI GATC 7 cut(s) 427, 568, 744, 800, 1086, 1148, 1159
Sau96I GGNCC 2 cut(s) 410, 920
SchI GAGTC 2 cut(s) 152, 386
ScrFI CCNGG 2 cut(s) 1109, 1183
SduI GDGCHC 1 cut(s) 1008
SfaNI GCATC 6 cut(s) 113, 187, 248, 511, 543, 808
SfcI CTRYAG 1 cut(s) 447
Sfr274I CTCGAG 1 cut(s) 90
SinI GGWCC 2 cut(s) 410, 920
SlaI CTCGAG 1 cut(s) 90
SmiMI CAYNNNNRTG 5 cut(s) 194, 257, 471, 594, 933
SmlI CTYRAG 1 cut(s) 90
SmoI CTYRAG 1 cut(s) 90
Sse9I AATT 7 cut(s) 150, 273, 293, 790, 881, 952, 1072
SsiI CCGC 2 cut(s) 490, 630
SspI AATATT 1 cut(s) 248
SspMI CTAG 7 cut(s) 167, 215, 231, 356, 396, 806, 1032
StyD4I CCNGG 2 cut(s) 1107, 1181
StyI CCWWGG 1 cut(s) 1152
TaaI ACNGT 2 cut(s) 509, 1023
TaiI ACGT 1 cut(s) 706
TaqI TCGA 4 cut(s) 91, 121, 717, 816
TasI AATT 7 cut(s) 150, 273, 293, 790, 881, 952, 1072
TfiI GAWTC 1 cut(s) 974
Tru1I TTAA 6 cut(s) 153, 257, 387, 549, 789, 1119
Tru9I TTAA 6 cut(s) 153, 257, 387, 549, 789, 1119
TseI GCWGC 1 cut(s) 170
TspDTI ATGAA 7 cut(s) 173, 215, 567, 584, 727, 741, 951
Van91I CCANNNNNTGG 1 cut(s) 644
VpaK11BI GGWCC 2 cut(s) 410, 920
VspI ATTAAT 1 cut(s) 257
XagI CCTNNNNNAGG 1 cut(s) 769
XapI RAATTY 2 cut(s) 881, 1072
XcmI CCANNNNNNNNNTGG 1 cut(s) 259
XhoI CTCGAG 1 cut(s) 90
XmiI GTMKAC 1 cut(s) 706
XspI CTAG 7 cut(s) 167, 215, 231, 356, 396, 806, 1032
Zsp2I ATGCAT 3 cut(s) 180, 484, 995
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.