FvH4_6g47480

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000125
Physical Location & Seq
Forward (+)
35962081 .. 35962941
861 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g47480.t1

Sequence Viewer

Length: 861 bp
ATGGAGATGCCGACGGCGGTAATGAGTACCTCAAAGTTGATGGAGCTCCCTCATGATATCCTCCTCAACATCTTTTCAAAACTGCCGGCGAGATCGCTTTTGCAGTTCCGGTGTGTCTCTAAGAGCTTATGTCACCTAGTCGACGATCCAGCTCGAGATCGCTTTTGCAGTTCCGATCTTGCTGCCATGCACATAGCAGCTACCAATGAACACATCGATGTAGAAGTTAGGTTTCTTCCTCTTTCTTCTTACGGTTTGCGGTTTGTTTCTTGCGGTTTGCTTGGATTTCAAAGTTATGTTCATGGAAAATTTGGTTTATACAATCCTCTAAGAGGAGAATACCTATGGCTCCCAGAACCTGAAGATAGATACGATATTATCAGGTGGGAGGGGTATGGTATGGGATTCGATAGTGTTACTAACACCCACAAGATTGTCCATTTTTTCAGTCATGGCCATCCGGACTCTATGGGGATGGTGGCTCGTGTTCATGTTTTGGGTACAAGCTCGTGGAGAAGAATACCCTCGGTTCCTCCTTGCAGCTTCAACGCTGTGGAAAATGCATATGCATATGGAAGCATGCATTGGTTAGAAAGGGGAAACCCCCGGATAATATCTTTTGATTTTGTAGAAGAGAAGTTCCGATGGACTAATCCTCCTCGTCTCACCATTCGAAGGGGATCCGAACTATTTTTGATCAGTCTGAGAGGATCTTTGGCGCTTGTTGATGTTGTTTATACTGAAAATGTCTTTTATTCTGAAAAGAAAGTTGAGATATGGGTGCACAAAGAACAGAAGTACTGGACAAAAGATTACAGCATGCCTTTAGATTATTGTTCCGGTGCCCTTTTTTCATTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

287

Amino Acids

32.99

Weight (kDa)

6.86

Isoelectric Point (pI)

49.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 14 - 52 7.9e-11 F-box domain
F-box-like PF12937 15 - 50 4.5e-09 F-box-like
FBA_3 PF08268 91 - 271 4e-16 F-box associated beta propeller domain
FBA_1 PF07734 101 - 264 1.7e-13 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 842
AccI GTMKAC 1 cut(s) 141
AccIII TCCGGA 1 cut(s) 460
AciI CCGC 3 cut(s) 17, 259, 273
AclWI GGATC 4 cut(s) 140, 675, 688, 718
AcoI YGGCCR 1 cut(s) 454
AcsI RAATTY 1 cut(s) 308
AcuI CTGAAG 1 cut(s) 381
AfaI GTAC 3 cut(s) 28, 502, 800
AfiI CCNNNNNNNGG 2 cut(s) 332, 675
AgsI TTSAA 3 cut(s) 78, 290, 547
AjuI GAANNNNNNNTTGG 2 cut(s) 568, 600
AluBI AGCT 6 cut(s) 46, 126, 152, 200, 507, 543
AluI AGCT 6 cut(s) 46, 126, 152, 200, 507, 543
Alw21I GWGCWC 2 cut(s) 48, 786
Alw26I GTCTC 2 cut(s) 121, 668
Alw44I GTGCAC 1 cut(s) 782
AlwI GGATC 4 cut(s) 140, 675, 688, 718
AlwNI CAGNNNCTG 1 cut(s) 359
Ama87I CYCGRG 1 cut(s) 153
Aor13HI TCCGGA 1 cut(s) 460
AoxI GGCC 1 cut(s) 454
ApaLI GTGCAC 1 cut(s) 782
ApeKI GCWGC 3 cut(s) 182, 197, 540
ApoI RAATTY 1 cut(s) 308
AspLEI GCGC 1 cut(s) 721
AsuC2I CCSGG 1 cut(s) 607
AsuHPI GGTGA 2 cut(s) 125, 658
AsuII TTCGAA 1 cut(s) 673
AvaI CYCGRG 1 cut(s) 153
BaeGI GKGCMC 2 cut(s) 786, 847
BalI TGGCCA 1 cut(s) 456
BamHI GGATCC 1 cut(s) 680
BanI GGYRCC 1 cut(s) 842
BanII GRGCYC 1 cut(s) 48
BauI CACGAG 2 cut(s) 483, 508
Bbv12I GWGCWC 2 cut(s) 48, 786
BbvI GCAGC 3 cut(s) 169, 209, 552
BccI CCATC 4 cut(s) 34, 465, 469, 639
BceAI ACGGC 1 cut(s) 30
BcgI CGANNNNNNTGC 2 cut(s) 164, 198
BclI TGATCA 1 cut(s) 696
BcnI CCSGG 1 cut(s) 607
BcoDI GTCTC 2 cut(s) 121, 668
BfaI CTAG 1 cut(s) 137
BfoI RGCGCY 1 cut(s) 722
BisI GCNGC 3 cut(s) 183, 198, 541
BlsI GCNGC 3 cut(s) 184, 199, 542
BmcAI AGTACT 1 cut(s) 800
Bme1390I CCNGG 1 cut(s) 607
BmeT110I CYCGRG 1 cut(s) 153
BmiI GGNNCC 4 cut(s) 350, 531, 682, 844
BmrFI CCNGG 1 cut(s) 607
Bpu14I TTCGAA 1 cut(s) 673
BpuMI CCSGG 1 cut(s) 607
Bsa29I ATCGAT 1 cut(s) 216
BsaJI CCNNGG 2 cut(s) 525, 605
BsaWI WCCGGW 3 cut(s) 108, 460, 839
BsaXI ACNNNNNCTCC 2 cut(s) 640, 670
Bsc4I CCNNNNNNNGG 2 cut(s) 332, 675
Bse118I RCCGGY 1 cut(s) 85
Bse1I ACTGG 1 cut(s) 806
BseAI TCCGGA 1 cut(s) 460
BseCI ATCGAT 1 cut(s) 216
BseDI CCNNGG 2 cut(s) 525, 605
BseGI GGATG 2 cut(s) 457, 480
BseLI CCNNNNNNNGG 2 cut(s) 332, 675
BseMII CTCAG 1 cut(s) 695
BseNI ACTGG 1 cut(s) 806
BseRI GAGGAG 3 cut(s) 53, 348, 648
BseSI GKGCMC 2 cut(s) 786, 847
BseXI GCAGC 3 cut(s) 169, 209, 552
BshFI GGCC 1 cut(s) 456
BshNI GGYRCC 1 cut(s) 842
BshVI ATCGAT 1 cut(s) 216
BsiHKAI GWGCWC 2 cut(s) 48, 786
BsiHKCI CYCGRG 1 cut(s) 153
BsiSI CCGG 5 cut(s) 86, 109, 461, 607, 840
BslI CCNNNNNNNGG 2 cut(s) 332, 675
BsmAI GTCTC 2 cut(s) 121, 668
BsmBI CGTCTC 1 cut(s) 668
BsnI GGCC 1 cut(s) 456
BsoBI CYCGRG 1 cut(s) 153
Bsp119I TTCGAA 1 cut(s) 673
Bsp1286I GDGCHC 3 cut(s) 48, 786, 847
Bsp13I TCCGGA 1 cut(s) 460
Bsp143I GATC 7 cut(s) 92, 145, 157, 175, 680, 696, 710
BspACI CCGC 3 cut(s) 17, 259, 273
BspANI GGCC 1 cut(s) 456
BspCNI CTCAG 1 cut(s) 696
BspDI ATCGAT 1 cut(s) 216
BspEI TCCGGA 1 cut(s) 460
BspHI TCATGA 1 cut(s) 52
BspLI GGNNCC 4 cut(s) 350, 531, 682, 844
BspPI GGATC 4 cut(s) 140, 675, 688, 718
BspT104I TTCGAA 1 cut(s) 673
BspT107I GGYRCC 1 cut(s) 842
BsrFI RCCGGY 1 cut(s) 85
BsrI ACTGG 1 cut(s) 806
BssAI RCCGGY 1 cut(s) 85
BssECI CCNNGG 2 cut(s) 525, 605
BssMI GATC 7 cut(s) 92, 145, 157, 175, 680, 696, 710
BssSI CACGAG 2 cut(s) 483, 508
Bst2BI CACGAG 2 cut(s) 483, 508
Bst4CI ACNGT 1 cut(s) 254
Bst6I CTCTTC 1 cut(s) 627
BstBI TTCGAA 1 cut(s) 673
BstC8I GCNNGC 3 cut(s) 87, 581, 821
BstDEI CTNAG 3 cut(s) 120, 329, 704
BstENI CCTNNNNNAGG 1 cut(s) 330
BstF5I GGATG 2 cut(s) 457, 480
BstH2I RGCGCY 1 cut(s) 722
BstHHI GCGC 1 cut(s) 721
BstKTI GATC 7 cut(s) 95, 148, 160, 178, 683, 699, 713
BstMAI GTCTC 2 cut(s) 121, 668
BstMBI GATC 7 cut(s) 92, 145, 157, 175, 680, 696, 710
BstNSI RCATGY 2 cut(s) 583, 823
BstSCI CCNGG 1 cut(s) 605
BstSLI GKGCMC 2 cut(s) 786, 847
BstV1I GCAGC 3 cut(s) 169, 209, 552
BstX2I RGATCY 2 cut(s) 680, 710
BstYI RGATCY 2 cut(s) 680, 710
Bsu15I ATCGAT 1 cut(s) 216
BsuRI GGCC 1 cut(s) 456
BsuTUI ATCGAT 1 cut(s) 216
BtsCI GGATG 2 cut(s) 457, 480
Cac8I GCNNGC 3 cut(s) 87, 581, 821
CaiI CAGNNNCTG 1 cut(s) 359
CciI TCATGA 1 cut(s) 52
CfoI GCGC 1 cut(s) 721
Cfr10I RCCGGY 1 cut(s) 85
ClaI ATCGAT 1 cut(s) 216
Csp6I GTAC 3 cut(s) 27, 501, 799
CviAII CATG 7 cut(s) 53, 187, 302, 452, 491, 580, 820
CviJI RGCY 9 cut(s) 46, 126, 152, 200, 349, 456, 482, 507, 543
CviKI_1 RGCY 9 cut(s) 46, 126, 152, 200, 349, 456, 482, 507, 543
CviQI GTAC 3 cut(s) 27, 501, 799
DdeI CTNAG 3 cut(s) 120, 329, 704
DpnI GATC 7 cut(s) 94, 147, 159, 177, 682, 698, 712
DpnII GATC 7 cut(s) 92, 145, 157, 175, 680, 696, 710
EaeI YGGCCR 1 cut(s) 454
Eam1104I CTCTTC 1 cut(s) 627
EarI CTCTTC 1 cut(s) 627
Ecl136II GAGCTC 1 cut(s) 46
Eco24I GRGCYC 1 cut(s) 48
Eco32I GATATC 1 cut(s) 58
Eco53kI GAGCTC 1 cut(s) 46
Eco57I CTGAAG 1 cut(s) 381
Eco88I CYCGRG 1 cut(s) 153
EcoICRI GAGCTC 1 cut(s) 46
EcoNI CCTNNNNNAGG 1 cut(s) 330
EcoRV GATATC 1 cut(s) 58
EcoT22I ATGCAT 3 cut(s) 565, 571, 585
EcoT38I GRGCYC 1 cut(s) 48
Esp3I CGTCTC 1 cut(s) 668
FaeI CATG 7 cut(s) 56, 190, 305, 455, 494, 583, 823
FatI CATG 7 cut(s) 52, 186, 301, 451, 490, 579, 819
FauNDI CATATG 2 cut(s) 565, 571
FbaI TGATCA 1 cut(s) 696
FblI GTMKAC 1 cut(s) 141
Fnu4HI GCNGC 3 cut(s) 183, 198, 541
FokI GGATG 2 cut(s) 444, 487
FriOI GRGCYC 1 cut(s) 48
Fsp4HI GCNGC 3 cut(s) 183, 198, 541
FspBI CTAG 1 cut(s) 137
GlaI GCGC 1 cut(s) 720
GluI GCNGC 3 cut(s) 183, 198, 541
HaeII RGCGCY 1 cut(s) 722
HaeIII GGCC 1 cut(s) 456
HapII CCGG 5 cut(s) 86, 109, 461, 607, 840
HhaI GCGC 1 cut(s) 721
Hin1II CATG 7 cut(s) 56, 190, 305, 455, 494, 583, 823
Hin6I GCGC 1 cut(s) 719
HinP1I GCGC 1 cut(s) 719
HincII GTYRAC 1 cut(s) 142
HindII GTYRAC 1 cut(s) 142
HinfI GANTC 2 cut(s) 405, 464
HpaII CCGG 5 cut(s) 86, 109, 461, 607, 840
HphI GGTGA 2 cut(s) 125, 658
Hpy166II GTNNAC 2 cut(s) 142, 784
Hpy188I TCNGA 5 cut(s) 175, 644, 685, 705, 760
Hpy188III TCNNGA 3 cut(s) 53, 155, 461
Hpy8I GTNNAC 2 cut(s) 142, 784
Hpy99I CGWCG 2 cut(s) 16, 146
HpyAV CCTTC 1 cut(s) 669
HpyCH4III ACNGT 1 cut(s) 254
HpyCH4V TGCA 8 cut(s) 103, 168, 190, 540, 563, 569, 583, 784
HpyF3I CTNAG 3 cut(s) 120, 329, 704
Hsp92II CATG 7 cut(s) 56, 190, 305, 455, 494, 583, 823
HspAI GCGC 1 cut(s) 719
Kpn2I TCCGGA 1 cut(s) 460
KroI GCCGGC 1 cut(s) 85
KroNI GCCGGC 1 cut(s) 87
Ksp22I TGATCA 1 cut(s) 696
Kzo9I GATC 7 cut(s) 92, 145, 157, 175, 680, 696, 710
LmnI GCTCC 3 cut(s) 43, 51, 354
Lsp1109I GCAGC 3 cut(s) 169, 209, 552
MaeI CTAG 1 cut(s) 137
MaeIII GTNAC 2 cut(s) 131, 415
MalI GATC 7 cut(s) 94, 147, 159, 177, 682, 698, 712
MboI GATC 7 cut(s) 92, 145, 157, 175, 680, 696, 710
MboII GAAGA 5 cut(s) 227, 237, 374, 528, 644
MflI RGATCY 2 cut(s) 680, 710
MhlI GDGCHC 3 cut(s) 48, 786, 847
MlsI TGGCCA 1 cut(s) 456
MluCI AATT 1 cut(s) 308
MluNI TGGCCA 1 cut(s) 456
MlyI GAGTC 1 cut(s) 458
Mox20I TGGCCA 1 cut(s) 456
Mph1103I ATGCAT 3 cut(s) 565, 571, 585
MroI TCCGGA 1 cut(s) 460
MroNI GCCGGC 1 cut(s) 85
MscI TGGCCA 1 cut(s) 456
MslI CAYNNNNRTG 1 cut(s) 216
Msp20I TGGCCA 1 cut(s) 456
MspI CCGG 5 cut(s) 86, 109, 461, 607, 840
MspR9I CCNGG 1 cut(s) 607
NaeI GCCGGC 1 cut(s) 87
NciI CCSGG 1 cut(s) 607
NdeI CATATG 2 cut(s) 565, 571
NdeII GATC 7 cut(s) 92, 145, 157, 175, 680, 696, 710
NgoMIV GCCGGC 1 cut(s) 85
NlaIII CATG 7 cut(s) 56, 190, 305, 455, 494, 583, 823
NlaIV GGNNCC 4 cut(s) 350, 531, 682, 844
NmuCI GTSAC 1 cut(s) 131
NsiI ATGCAT 3 cut(s) 565, 571, 585
NspI RCATGY 2 cut(s) 583, 823
NspV TTCGAA 1 cut(s) 673
PaeI GCATGC 2 cut(s) 583, 823
PaeR7I CTCGAG 1 cut(s) 153
PagI TCATGA 1 cut(s) 52
PdiI GCCGGC 1 cut(s) 87
PfeI GAWTC 1 cut(s) 405
PkrI GCNGC 3 cut(s) 184, 199, 542
PleI GAGTC 1 cut(s) 458
PpsI GAGTC 1 cut(s) 458
Psp124BI GAGCTC 1 cut(s) 48
PspN4I GGNNCC 4 cut(s) 350, 531, 682, 844
PstNI CAGNNNCTG 1 cut(s) 359
PsuI RGATCY 2 cut(s) 680, 710
RsaI GTAC 3 cut(s) 28, 502, 800
RsaNI GTAC 3 cut(s) 27, 501, 799
RseI CAYNNNNRTG 1 cut(s) 216
SacI GAGCTC 1 cut(s) 48
SalI GTCGAC 1 cut(s) 140
SatI GCNGC 3 cut(s) 183, 198, 541
Sau3AI GATC 7 cut(s) 92, 145, 157, 175, 680, 696, 710
ScaI AGTACT 1 cut(s) 800
SchI GAGTC 1 cut(s) 458
ScrFI CCNGG 1 cut(s) 607
SduI GDGCHC 3 cut(s) 48, 786, 847
Sfr274I CTCGAG 1 cut(s) 153
SfuI TTCGAA 1 cut(s) 673
SlaI CTCGAG 1 cut(s) 153
SmiMI CAYNNNNRTG 1 cut(s) 216
SmlI CTYRAG 1 cut(s) 153
SmoI CTYRAG 1 cut(s) 153
SphI GCATGC 2 cut(s) 583, 823
Sse9I AATT 1 cut(s) 308
SsiI CCGC 3 cut(s) 17, 259, 273
SspMI CTAG 1 cut(s) 137
SstI GAGCTC 1 cut(s) 48
StyD4I CCNGG 1 cut(s) 605
TaaI ACNGT 1 cut(s) 254
TaqI TCGA 5 cut(s) 141, 154, 216, 408, 673
TasI AATT 1 cut(s) 308
TatI WGTACW 1 cut(s) 798
TfiI GAWTC 1 cut(s) 405
TseFI GTSAC 1 cut(s) 131
TseI GCWGC 3 cut(s) 182, 197, 540
Tsp45I GTSAC 1 cut(s) 131
TspDTI ATGAA 4 cut(s) 222, 290, 479, 843
VneI GTGCAC 1 cut(s) 782
XagI CCTNNNNNAGG 1 cut(s) 330
XapI RAATTY 1 cut(s) 308
XceI RCATGY 2 cut(s) 583, 823
XhoI CTCGAG 1 cut(s) 153
XmiI GTMKAC 1 cut(s) 141
XspI CTAG 1 cut(s) 137
ZrmI AGTACT 1 cut(s) 800
Zsp2I ATGCAT 3 cut(s) 565, 571, 585
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.