RLG00000021625

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000125
Physical Location & Seq
Forward (+)
76843946 .. 76845058
1113 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021625

Sequence Viewer

Length: 1113 bp
ATGGAGATGCCGACGGCCGCAATGAGTACATCAAAGTTAATGGAGCTTCCTCATGATATCCTCCTCAACATCTTTTCGAGACTGCCGGCGGCATCGCTTTTGCAGTTCCAATGCGTCTCTAAGAGCTCACGTGACCTAGTTAACGATCCAGCTCTTACTGCCATGCACATGGCAGCTACCAATGAACACGTCGACGTAGAAGCTAGGGTTCTTTCTGCTTCTCTCTTCGAGCGCCATTTTCAGTTTGTTTCTTGCGGTTTGCTTGGCTTTAGATGTGATGGTTCTGATGGAAAACTTGGTTTATACAATCCTTTAAGAGGAGAATATCTTGAGCTCCCACTACCTGAAGATGGATACAGAAACTGGTATGGTATGGGATTCGATAGCGTTACTAGCACCCACAAGATTGTCCATTTTTTCTCTCGGTTACATGATGTGAATCACCTGGGTAATGTTCATGTTTTGGGCACAAGCTCGTGGAGAAGAATACCCTCGGTTCCTCGTTGGTGTCTTATAAGTAGGGAACGTGCATATATATATGCATATGGAAACATGCATTGGTTGGTAGAGGGAAACCAGATAATCTCTTTTGACTTCGAAAAAGAGGAGTTCGCATGGACTAATCCACCCCATCTCAATTTTCCAAGCGAATCCCAGCTTTTTTTGATTAATCTGAGGGGATCTATCGCGCTTGTTGATGTTTCCGATGAAAATATCGAAGTTGAGATATGGGTGTACAAAGAAAAGAAGTACTGGGCAAAAGATTACAGCCTGAATTTCTGTTGTCCCCGTGAATATAGATACTCTGTGGGCGCTTGGGAGCATGGCATATACATATTAATTCCATATGCTAACAAGGCTCCACTGTACTTTACTGTGGTCTATTATGATCTAAGATGTGATAGCGTGAGAGGTACTGTACCCACTGAATATTGGCGACAGCGAGAGGAAATCCATATGTTTAGTTATACTGGAAGCCTGATTTCTTTAAAAAAGTATGATAACTTGAGAACGAATAACAAGAAGGAGAAGAATTTTTTTTATGCTGGAAAGTCTGAACTTCCAGAATTTCTTTCTGAGCTGAAAGTACCAAGGGACAAGCTAGCAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_3

Protein Analysis

371

Amino Acids

42.98

Weight (kDa)

6.36

Isoelectric Point (pI)

41.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 14 - 52 2.8e-10 F-box domain
F-box-like PF12937 15 - 52 1.7e-09 F-box-like
FBA_3 PF08268 84 - 306 2.2e-20 F-box associated beta propeller domain
FBA_1 PF07734 85 - 248 2.2e-14 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 515
AccI GTMKAC 1 cut(s) 192
AccII CGCG 1 cut(s) 689
AciI CCGC 3 cut(s) 18, 89, 255
AclWI GGATC 2 cut(s) 140, 688
AcoI YGGCCR 1 cut(s) 15
AcsI RAATTY 3 cut(s) 775, 1033, 1067
AcuI CTGAAG 1 cut(s) 366
AcvI CACGTG 1 cut(s) 131
AfaI GTAC 7 cut(s) 28, 737, 752, 869, 916, 921, 1089
AfiI CCNNNNNNNGG 2 cut(s) 317, 350
AflIII ACRYGT 1 cut(s) 187
AjiI CACGTC 1 cut(s) 190
AjnI CCWGG 1 cut(s) 444
AjuI GAANNNNNNNTTGG 2 cut(s) 541, 573
Alw21I GWGCWC 2 cut(s) 128, 336
Alw26I GTCTC 2 cut(s) 73, 121
AlwI GGATC 2 cut(s) 140, 688
AlwNI CAGNNNCTG 1 cut(s) 363
AoxI GGCC 1 cut(s) 15
ApeKI GCWGC 1 cut(s) 173
ApoI RAATTY 3 cut(s) 775, 1033, 1067
AseI ATTAAT 2 cut(s) 669, 839
AspLEI GCGC 3 cut(s) 234, 691, 815
AsuHPI GGTGA 1 cut(s) 434
AsuII TTCGAA 1 cut(s) 597
AsuNHI GCTAGC 1 cut(s) 1102
BaeGI GKGCMC 1 cut(s) 470
BanII GRGCYC 2 cut(s) 128, 336
BauI CACGAG 1 cut(s) 475
BbrPI CACGTG 1 cut(s) 131
Bbv12I GWGCWC 2 cut(s) 128, 336
BbvI GCAGC 1 cut(s) 185
BccI CCATC 4 cut(s) 272, 281, 344, 639
BceAI ACGGC 1 cut(s) 30
BciT130I CCWGG 1 cut(s) 446
BciVI GTATCC 1 cut(s) 347
BcoDI GTCTC 2 cut(s) 73, 121
BfaI CTAG 4 cut(s) 137, 204, 393, 1103
BfoI RGCGCY 2 cut(s) 235, 816
BfuI GTATCC 1 cut(s) 347
BisI GCNGC 3 cut(s) 18, 90, 174
BlsI GCNGC 3 cut(s) 19, 91, 175
BmcAI AGTACT 1 cut(s) 752
Bme1390I CCNGG 1 cut(s) 446
BmgBI CACGTC 1 cut(s) 190
BmiI GGNNCC 2 cut(s) 498, 861
BmrFI CCNGG 1 cut(s) 446
BmrI ACTGGG 1 cut(s) 763
BmsI GCATC 1 cut(s) 101
BmtI GCTAGC 1 cut(s) 1106
BmuI ACTGGG 1 cut(s) 763
Bpu14I TTCGAA 1 cut(s) 597
BpuEI CTTGAG 2 cut(s) 350, 1027
BsaAI YACGTR 1 cut(s) 131
BsaBI GATNNNNATC 1 cut(s) 438
BsaJI CCNNGG 3 cut(s) 445, 492, 1091
Bsc4I CCNNNNNNNGG 2 cut(s) 317, 350
Bse118I RCCGGY 1 cut(s) 85
Bse1I ACTGG 3 cut(s) 368, 758, 976
Bse3DI GCAATG 1 cut(s) 27
Bse8I GATNNNNATC 1 cut(s) 438
BseBI CCWGG 1 cut(s) 446
BseDI CCNNGG 3 cut(s) 445, 492, 1091
BseJI GATNNNNATC 1 cut(s) 438
BseLI CCNNNNNNNGG 2 cut(s) 317, 350
BseMI GCAATG 1 cut(s) 27
BseMII CTCAG 2 cut(s) 665, 1068
BseNI ACTGG 3 cut(s) 368, 758, 976
BseRI GAGGAG 3 cut(s) 53, 333, 620
BseSI GKGCMC 1 cut(s) 470
BseX3I CGGCCG 1 cut(s) 15
BseXI GCAGC 1 cut(s) 185
BseYI CCCAGC 1 cut(s) 654
Bsh1236I CGCG 1 cut(s) 689
Bsh1285I CGRYCG 1 cut(s) 18
BshFI GGCC 1 cut(s) 17
BsiEI CGRYCG 1 cut(s) 18
BsiHKAI GWGCWC 2 cut(s) 128, 336
BsiSI CCGG 1 cut(s) 86
BslFI GGGAC 2 cut(s) 771, 1109
BslI CCNNNNNNNGG 2 cut(s) 317, 350
BsmAI GTCTC 2 cut(s) 73, 121
BsmBI CGTCTC 1 cut(s) 121
BsmFI GGGAC 2 cut(s) 771, 1109
BsnI GGCC 1 cut(s) 17
Bsp119I TTCGAA 1 cut(s) 597
Bsp1286I GDGCHC 3 cut(s) 128, 336, 470
Bsp1407I TGTACA 1 cut(s) 735
Bsp143I GATC 3 cut(s) 145, 680, 889
BspACI CCGC 3 cut(s) 18, 89, 255
BspANI GGCC 1 cut(s) 17
BspCNI CTCAG 2 cut(s) 666, 1069
BspFNI CGCG 1 cut(s) 689
BspHI TCATGA 1 cut(s) 52
BspLI GGNNCC 2 cut(s) 498, 861
BspOI GCTAGC 1 cut(s) 1106
BspPI GGATC 2 cut(s) 140, 688
BspT104I TTCGAA 1 cut(s) 597
BsrDI GCAATG 1 cut(s) 27
BsrFI RCCGGY 1 cut(s) 85
BsrGI TGTACA 1 cut(s) 735
BsrI ACTGG 3 cut(s) 368, 758, 976
BssAI RCCGGY 1 cut(s) 85
BssECI CCNNGG 3 cut(s) 445, 492, 1091
BssMI GATC 3 cut(s) 145, 680, 889
BssSI CACGAG 1 cut(s) 475
BssT1I CCWWGG 1 cut(s) 1091
Bst2BI CACGAG 1 cut(s) 475
Bst2UI CCWGG 1 cut(s) 446
Bst4CI ACNGT 3 cut(s) 867, 877, 919
Bst6I CTCTTC 1 cut(s) 230
BstAUI TGTACA 1 cut(s) 735
BstBAI YACGTR 1 cut(s) 131
BstBI TTCGAA 1 cut(s) 597
BstC8I GCNNGC 2 cut(s) 87, 1104
BstDEI CTNAG 4 cut(s) 120, 674, 893, 1077
BstENI CCTNNNNNAGG 1 cut(s) 315
BstFNI CGCG 1 cut(s) 689
BstH2I RGCGCY 2 cut(s) 235, 816
BstHHI GCGC 3 cut(s) 234, 691, 815
BstKTI GATC 3 cut(s) 148, 683, 892
BstMAI GTCTC 2 cut(s) 73, 121
BstMBI GATC 3 cut(s) 145, 680, 889
BstMCI CGRYCG 1 cut(s) 18
BstMWI GCNNNNNNNGC 3 cut(s) 158, 393, 857
BstNI CCWGG 1 cut(s) 446
BstNSI RCATGY 1 cut(s) 556
BstSCI CCNGG 1 cut(s) 444
BstSLI GKGCMC 1 cut(s) 470
BstUI CGCG 1 cut(s) 689
BstV1I GCAGC 1 cut(s) 185
BstX2I RGATCY 1 cut(s) 680
BstXI CCANNNNNNTGG 1 cut(s) 169
BstYI RGATCY 1 cut(s) 680
BstZI CGGCCG 1 cut(s) 15
BsuI GTATCC 1 cut(s) 347
BsuRI GGCC 1 cut(s) 17
BtgZI GCGATG 1 cut(s) 78
BtrI CACGTC 1 cut(s) 190
BtsIMutI CAGTG 2 cut(s) 863, 924
Cac8I GCNNGC 2 cut(s) 87, 1104
CaiI CAGNNNCTG 1 cut(s) 363
CciI TCATGA 1 cut(s) 52
CfoI GCGC 3 cut(s) 234, 691, 815
Cfr10I RCCGGY 1 cut(s) 85
CseI GACGC 1 cut(s) 103
Csp6I GTAC 7 cut(s) 27, 736, 751, 868, 915, 920, 1088
CviAII CATG 8 cut(s) 53, 163, 169, 431, 458, 553, 615, 824
CviQI GTAC 7 cut(s) 27, 736, 751, 868, 915, 920, 1088
DdeI CTNAG 4 cut(s) 120, 674, 893, 1077
DpnI GATC 3 cut(s) 147, 682, 891
DpnII GATC 3 cut(s) 145, 680, 889
DraI TTTAAA 1 cut(s) 990
EaeI YGGCCR 1 cut(s) 15
EagI CGGCCG 1 cut(s) 15
Eam1104I CTCTTC 1 cut(s) 230
EarI CTCTTC 1 cut(s) 230
Ecl136II GAGCTC 2 cut(s) 126, 334
EclXI CGGCCG 1 cut(s) 15
Eco130I CCWWGG 1 cut(s) 1091
Eco24I GRGCYC 2 cut(s) 128, 336
Eco32I GATATC 1 cut(s) 58
Eco52I CGGCCG 1 cut(s) 15
Eco53kI GAGCTC 2 cut(s) 126, 334
Eco57I CTGAAG 1 cut(s) 366
Eco72I CACGTG 1 cut(s) 131
EcoICRI GAGCTC 2 cut(s) 126, 334
EcoNI CCTNNNNNAGG 1 cut(s) 315
EcoRII CCWGG 1 cut(s) 444
EcoRV GATATC 1 cut(s) 58
EcoT14I CCWWGG 1 cut(s) 1091
EcoT22I ATGCAT 2 cut(s) 544, 558
EcoT38I GRGCYC 2 cut(s) 128, 336
ErhI CCWWGG 1 cut(s) 1091
Esp3I CGTCTC 1 cut(s) 121
FaeI CATG 8 cut(s) 56, 166, 172, 434, 461, 556, 618, 827
FaqI GGGAC 2 cut(s) 771, 1109
FatI CATG 8 cut(s) 52, 162, 168, 430, 457, 552, 614, 823
FauNDI CATATG 3 cut(s) 544, 847, 957
FblI GTMKAC 1 cut(s) 192
Fnu4HI GCNGC 3 cut(s) 18, 90, 174
FriOI GRGCYC 2 cut(s) 128, 336
Fsp4HI GCNGC 3 cut(s) 18, 90, 174
FspBI CTAG 4 cut(s) 137, 204, 393, 1103
GlaI GCGC 3 cut(s) 233, 690, 814
GluI GCNGC 3 cut(s) 18, 90, 174
GsaI CCCAGC 1 cut(s) 658
HaeII RGCGCY 2 cut(s) 235, 816
HaeIII GGCC 1 cut(s) 17
HapII CCGG 1 cut(s) 86
HgaI GACGC 1 cut(s) 103
HhaI GCGC 3 cut(s) 234, 691, 815
Hin1II CATG 8 cut(s) 56, 166, 172, 434, 461, 556, 618, 827
Hin6I GCGC 3 cut(s) 232, 689, 813
HinP1I GCGC 3 cut(s) 232, 689, 813
HincII GTYRAC 2 cut(s) 142, 193
HindII GTYRAC 2 cut(s) 142, 193
HinfI GANTC 3 cut(s) 378, 439, 650
HpaI GTTAAC 1 cut(s) 142
HpaII CCGG 1 cut(s) 86
HphI GGTGA 1 cut(s) 434
Hpy166II GTNNAC 3 cut(s) 142, 193, 736
Hpy188I TCNGA 5 cut(s) 286, 675, 706, 1057, 1078
Hpy188III TCNNGA 4 cut(s) 53, 78, 329, 1064
Hpy8I GTNNAC 3 cut(s) 142, 193, 736
Hpy99I CGWCG 3 cut(s) 16, 194, 197
HpyAV CCTTC 1 cut(s) 1018
HpyCH4III ACNGT 3 cut(s) 867, 877, 919
HpyCH4IV ACGT 4 cut(s) 130, 189, 195, 526
HpyCH4V TGCA 5 cut(s) 103, 166, 530, 542, 556
HpyF10VI GCNNNNNNNGC 3 cut(s) 158, 393, 857
HpyF3I CTNAG 4 cut(s) 120, 674, 893, 1077
HpySE526I ACGT 4 cut(s) 130, 189, 195, 526
Hsp92II CATG 8 cut(s) 56, 166, 172, 434, 461, 556, 618, 827
HspAI GCGC 3 cut(s) 232, 689, 813
KroI GCCGGC 1 cut(s) 85
KroNI GCCGGC 1 cut(s) 87
KspAI GTTAAC 1 cut(s) 142
Kzo9I GATC 3 cut(s) 145, 680, 889
LmnI GCTCC 4 cut(s) 43, 339, 820, 865
Lsp1109I GCAGC 1 cut(s) 185
LweI GCATC 1 cut(s) 101
MaeI CTAG 4 cut(s) 137, 204, 393, 1103
MaeII ACGT 4 cut(s) 130, 189, 195, 526
MaeIII GTNAC 3 cut(s) 131, 388, 426
MalI GATC 3 cut(s) 147, 682, 891
MboI GATC 3 cut(s) 145, 680, 889
MboII GAAGA 4 cut(s) 217, 359, 495, 1042
MflI RGATCY 1 cut(s) 680
MhlI GDGCHC 3 cut(s) 128, 336, 470
MluCI AATT 6 cut(s) 637, 775, 840, 1033, 1067, 1107
Mph1103I ATGCAT 2 cut(s) 544, 558
MroNI GCCGGC 1 cut(s) 85
MseI TTAA 6 cut(s) 38, 141, 314, 669, 839, 989
MslI CAYNNNNRTG 1 cut(s) 167
MspI CCGG 1 cut(s) 86
MspR9I CCNGG 1 cut(s) 446
MvaI CCWGG 1 cut(s) 446
MvnI CGCG 1 cut(s) 689
MwoI GCNNNNNNNGC 3 cut(s) 158, 393, 857
NaeI GCCGGC 1 cut(s) 87
NdeI CATATG 3 cut(s) 544, 847, 957
NdeII GATC 3 cut(s) 145, 680, 889
NgoMIV GCCGGC 1 cut(s) 85
NheI GCTAGC 1 cut(s) 1102
NlaIII CATG 8 cut(s) 56, 166, 172, 434, 461, 556, 618, 827
NlaIV GGNNCC 2 cut(s) 498, 861
NmuCI GTSAC 1 cut(s) 131
NsiI ATGCAT 2 cut(s) 544, 558
NspI RCATGY 1 cut(s) 556
NspV TTCGAA 1 cut(s) 597
PagI TCATGA 1 cut(s) 52
PdiI GCCGGC 1 cut(s) 87
PfeI GAWTC 3 cut(s) 378, 439, 650
PkrI GCNGC 3 cut(s) 19, 91, 175
PmaCI CACGTG 1 cut(s) 131
PmlI CACGTG 1 cut(s) 131
Ppu21I YACGTR 1 cut(s) 131
PshBI ATTAAT 2 cut(s) 669, 839
PsiI TTATAA 1 cut(s) 515
Psp124BI GAGCTC 2 cut(s) 128, 336
Psp6I CCWGG 1 cut(s) 444
PspCI CACGTG 1 cut(s) 131
PspFI CCCAGC 1 cut(s) 654
PspGI CCWGG 1 cut(s) 444
PspN4I GGNNCC 2 cut(s) 498, 861
PstNI CAGNNNCTG 1 cut(s) 363
PsuI RGATCY 1 cut(s) 680
RsaI GTAC 7 cut(s) 28, 737, 752, 869, 916, 921, 1089
RsaNI GTAC 7 cut(s) 27, 736, 751, 868, 915, 920, 1088
RseI CAYNNNNRTG 1 cut(s) 167
SacI GAGCTC 2 cut(s) 128, 336
SalI GTCGAC 1 cut(s) 191
SaqAI TTAA 6 cut(s) 38, 141, 314, 669, 839, 989
SatI GCNGC 3 cut(s) 18, 90, 174
Sau3AI GATC 3 cut(s) 145, 680, 889
ScaI AGTACT 1 cut(s) 752
ScrFI CCNGG 1 cut(s) 446
SduI GDGCHC 3 cut(s) 128, 336, 470
SfaNI GCATC 1 cut(s) 101
SfuI TTCGAA 1 cut(s) 597
SgrDI CGTCGACG 1 cut(s) 191
SmiMI CAYNNNNRTG 1 cut(s) 167
SmlI CTYRAG 2 cut(s) 329, 1006
SmoI CTYRAG 2 cut(s) 329, 1006
Sse9I AATT 6 cut(s) 637, 775, 840, 1033, 1067, 1107
SsiI CCGC 3 cut(s) 18, 89, 255
SspI AATATT 1 cut(s) 932
SspMI CTAG 4 cut(s) 137, 204, 393, 1103
SstI GAGCTC 2 cut(s) 128, 336
StyD4I CCNGG 1 cut(s) 444
StyI CCWWGG 1 cut(s) 1091
TaaI ACNGT 3 cut(s) 867, 877, 919
TaiI ACGT 4 cut(s) 133, 192, 198, 529
TaqI TCGA 6 cut(s) 77, 192, 228, 381, 597, 717
TasI AATT 6 cut(s) 637, 775, 840, 1033, 1067, 1107
TatI WGTACW 4 cut(s) 26, 735, 750, 867
TauI GCSGC 2 cut(s) 20, 92
TfiI GAWTC 3 cut(s) 378, 439, 650
Tru1I TTAA 6 cut(s) 38, 141, 314, 669, 839, 989
Tru9I TTAA 6 cut(s) 38, 141, 314, 669, 839, 989
TscAI CASTG 2 cut(s) 870, 931
TseFI GTSAC 1 cut(s) 131
TseI GCWGC 1 cut(s) 173
Tsp45I GTSAC 1 cut(s) 131
TspDTI ATGAA 3 cut(s) 198, 446, 723
TspRI CASTG 2 cut(s) 870, 931
VspI ATTAAT 2 cut(s) 669, 839
XagI CCTNNNNNAGG 1 cut(s) 315
XapI RAATTY 3 cut(s) 775, 1033, 1067
XceI RCATGY 1 cut(s) 556
XmiI GTMKAC 1 cut(s) 192
XspI CTAG 4 cut(s) 137, 204, 393, 1103
ZrmI AGTACT 1 cut(s) 752
Zsp2I ATGCAT 2 cut(s) 544, 558
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.