Rh2AG574100

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000125
Physical Location & Seq
Forward (+)
80389462 .. 80391783
2322 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG574100.1

Sequence Viewer

Length: 1398 bp
ATGGAGATTGCAAGGACCAAGGAAATGTCGAGCGGCAGCCACAGCTCGAAGGACCTCCCTACGGTGATCCTCCTCAACATCCTTTCTCGACTGCCAGCAAAATCTCTTTTTCGTTTCCAATGTGTCTCTAAGATTTTCTATAAGCTAGTCAACGACCCCTCTCTAGCTGCAATGCATCTTCAGCACAACACCGATATGATTGAGGAGCCACCTCTAGTCATGGTCCATTCTAGGTCTGCATCCAAATATTCCAGATTAATGCTGTTTCGAGGCTGGAAATACAATGGCGATAGTTGGACAGCAACAAGCTATGATGACAGTTTCTCTTCAGGTATTTTGTCCATTGAAACTAAATATGAGCTAGAGTTTGCTTCTGGTGGCTTGCTTTGCTTTAAGGACTCTAGTTTATCAAGAGGTCCAGCCCTATTATGCAATCCACTTAGGGGAGAATCTCTAGAGCTCCCACCTTCTAATGTTAATTCACTATCCCGCTTGAATGAGTGGTACGGTATAGGAGTGGATGCCACTACCAGCACCTACAAGATTGTTAATATTGTTTTCGGGATTGATCCTAGCCGTTCCAGTTCATATTTGACCCAAGTTCATGTACTGGGGACAAGCTCTTGGCGACGAATATCCGCGGTTCCTCCTAGTGGTTTAAGTAAGCAGCATGCATTTGCATATGGAAACACATATTGGTTGATTGGACAATGTATACTATGCTTCGACTTCAATGAGGAGAGGTTCATATGGACTTCTCATCCCAACTTACCCTCCAAAAGGGTTCTTAACTTGCTTAATTTGAGAGGATCTCTGGCCATTGTTGATGCTACTTCAGTATCAGTTTCCCAAGTTGAGGTATGGGTGTTGAAAAATGATAAGAAAGAATGGGTGAAGGACTACAACATAAAACTCAATGTTGGTCCGTCTTATTGTTATGAATGGTGGCCTCTCAATTGTTTTATTCTTGTTGATGACTCTAGAAGCAGAAAATGCATTGTGGGTGTGCTCCATTACAATCTAGGGTGGGGTTCTAGGAAACGCTTTCGTTGTGGAAATGGAAGAGTTGAAGTGAATTCCGTCCCCAAGATCTTCAGCTACACCGGAAGCCTGATTTCTCTAAAAACATATGGTAATTTATTGGTAGAAGGATCAGAAGCAGATCAGGGGATTGGAACTTTGTTATCTGGGAAAGCCATGCACTTAGTTAATCAAAGCAGCAAGGGGGAAGGCCACTTGACTAGATCGAACAATGTCTTAGAGATCCGTGTGACCAGAAAAGTGATTTTTGTTGGCCAGTCTCGAATGGATGTCGAGAAGGATTTCAGTAGGGAGGTCTATCAACTTTGTTCTGCTGCTGCAGCCACGCAAGCTCTTGGTTATCTTTTCCATCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

465

Amino Acids

52.09

Weight (kDa)

9.07

Isoelectric Point (pI)

40.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 18 - 55 4.4e-10 F-box domain
F-box-like PF12937 18 - 55 7.3e-09 F-box-like
FBA_1 PF07734 123 - 328 3e-14 F-box associated beta propeller domain
Beta-prop_KIB1-4 PF03478 124 - 299 3.5e-07 KIB1-4 beta-propeller
FBA_3 PF08268 126 - 300 4.9e-19 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 33
AccI GTMKAC 1 cut(s) 715
AccII CGCG 1 cut(s) 641
AciI CCGC 4 cut(s) 33, 490, 639, 641
AclWI GGATC 5 cut(s) 61, 563, 817, 1159, 1258
AcoI YGGCCR 2 cut(s) 816, 1294
AcsI RAATTY 1 cut(s) 1075
AcuI CTGAAG 4 cut(s) 164, 312, 819, 1078
AfaI GTAC 2 cut(s) 506, 609
AfiI CCNNNNNNNGG 5 cut(s) 61, 443, 653, 780, 856
AgsI TTSAA 5 cut(s) 347, 496, 733, 871, 1070
AjuI GAANNNNNNNTTGG 2 cut(s) 679, 711
AluBI AGCT 9 cut(s) 45, 145, 167, 309, 361, 460, 621, 1098, 1373
AluI AGCT 9 cut(s) 45, 145, 167, 309, 361, 460, 621, 1098, 1373
Alw21I GWGCWC 2 cut(s) 462, 1011
Alw26I GTCTC 2 cut(s) 130, 1305
AlwI GGATC 5 cut(s) 61, 563, 817, 1159, 1258
AoxI GGCC 4 cut(s) 816, 947, 1231, 1294
ApeKI GCWGC 7 cut(s) 36, 167, 667, 1218, 1355, 1358, 1361
ApoI RAATTY 1 cut(s) 1075
AseI ATTAAT 1 cut(s) 257
Asp700I GAANNNNTTC 1 cut(s) 1322
AspS9I GGNCC 5 cut(s) 15, 52, 223, 416, 923
AsuHPI GGTGA 2 cut(s) 76, 904
AvaII GGWCC 5 cut(s) 15, 52, 223, 416, 923
BaeI ACNNNNGTAYC 2 cut(s) 822, 855
BalI TGGCCA 2 cut(s) 818, 1296
BanII GRGCYC 1 cut(s) 462
Bbv12I GWGCWC 2 cut(s) 462, 1011
BbvI GCAGC 7 cut(s) 48, 154, 679, 1230, 1342, 1345, 1373
BceAI ACGGC 1 cut(s) 561
BcoDI GTCTC 2 cut(s) 130, 1305
BfmI CTRYAG 1 cut(s) 1359
BglII AGATCT 1 cut(s) 1089
BisI GCNGC 8 cut(s) 34, 37, 168, 668, 1219, 1356, 1359, 1362
BlsI GCNGC 8 cut(s) 35, 38, 169, 669, 1220, 1357, 1360, 1363
Bme18I GGWCC 5 cut(s) 15, 52, 223, 416, 923
BmgT120I GGNCC 5 cut(s) 15, 52, 223, 416, 923
BmiI GGNNCC 2 cut(s) 207, 645
BmrI ACTGGG 1 cut(s) 620
BmsI GCATC 4 cut(s) 184, 248, 511, 817
BmuI ACTGGG 1 cut(s) 620
BplI GAGNNNNNCTC 2 cut(s) 796, 828
BsaJI CCNNGG 2 cut(s) 18, 639
BsaWI WCCGGW 1 cut(s) 1103
BsaXI ACNNNNNCTCC 2 cut(s) 758, 788
Bsc4I CCNNNNNNNGG 5 cut(s) 61, 443, 653, 780, 856
Bse1I ACTGG 3 cut(s) 582, 615, 1297
Bse3DI GCAATG 1 cut(s) 177
BseDI CCNNGG 2 cut(s) 18, 639
BseGI GGATG 6 cut(s) 78, 239, 526, 760, 1315, 1390
BseLI CCNNNNNNNGG 5 cut(s) 61, 443, 653, 780, 856
BseMI GCAATG 1 cut(s) 177
BseNI ACTGG 3 cut(s) 582, 615, 1297
BseRI GAGGAG 3 cut(s) 62, 218, 752
BseXI GCAGC 7 cut(s) 48, 154, 679, 1230, 1342, 1345, 1373
Bsh1236I CGCG 1 cut(s) 641
BshFI GGCC 4 cut(s) 818, 949, 1233, 1296
BsiHKAI GWGCWC 2 cut(s) 462, 1011
BsiSI CCGG 1 cut(s) 1104
BslFI GGGAC 2 cut(s) 628, 1067
BslI CCNNNNNNNGG 5 cut(s) 61, 443, 653, 780, 856
BsmAI GTCTC 2 cut(s) 130, 1305
BsmFI GGGAC 2 cut(s) 628, 1067
BsnI GGCC 4 cut(s) 818, 949, 1233, 1296
Bsp1286I GDGCHC 2 cut(s) 462, 1011
Bsp143I GATC 8 cut(s) 66, 568, 809, 1089, 1151, 1162, 1244, 1263
BspACI CCGC 4 cut(s) 33, 490, 639, 641
BspANI GGCC 4 cut(s) 818, 949, 1233, 1296
BspFNI CGCG 1 cut(s) 641
BspLI GGNNCC 2 cut(s) 207, 645
BspMAI CTGCAG 1 cut(s) 1363
BspPI GGATC 5 cut(s) 61, 563, 817, 1159, 1258
BsrBI CCGCTC 1 cut(s) 33
BsrDI GCAATG 1 cut(s) 177
BsrI ACTGG 3 cut(s) 582, 615, 1297
BssECI CCNNGG 2 cut(s) 18, 639
BssMI GATC 8 cut(s) 66, 568, 809, 1089, 1151, 1162, 1244, 1263
BssNAI GTATAC 1 cut(s) 716
BssT1I CCWWGG 1 cut(s) 18
Bst1107I GTATAC 1 cut(s) 716
Bst4CI ACNGT 3 cut(s) 64, 320, 509
Bst6I CTCTTC 2 cut(s) 331, 1057
BstAPI GCANNNNNTGC 1 cut(s) 993
BstC8I GCNNGC 4 cut(s) 96, 383, 672, 1371
BstDEI CTNAG 4 cut(s) 129, 440, 1204, 1258
BstDSI CCRYGG 1 cut(s) 639
BstENI CCTNNNNNAGG 1 cut(s) 778
BstF5I GGATG 6 cut(s) 78, 239, 526, 760, 1315, 1390
BstFNI CGCG 1 cut(s) 641
BstKTI GATC 8 cut(s) 69, 571, 812, 1092, 1154, 1165, 1247, 1266
BstMAI GTCTC 2 cut(s) 130, 1305
BstMBI GATC 8 cut(s) 66, 568, 809, 1089, 1151, 1162, 1244, 1263
BstMWI GCNNNNNNNGC 6 cut(s) 42, 181, 387, 993, 1361, 1370
BstNSI RCATGY 1 cut(s) 674
BstSFI CTRYAG 1 cut(s) 1359
BstUI CGCG 1 cut(s) 641
BstV1I GCAGC 7 cut(s) 48, 154, 679, 1230, 1342, 1345, 1373
BstX2I RGATCY 3 cut(s) 809, 1089, 1263
BstYI RGATCY 3 cut(s) 809, 1089, 1263
BstZ17I GTATAC 1 cut(s) 716
BsuRI GGCC 4 cut(s) 818, 949, 1233, 1296
BtgI CCRYGG 1 cut(s) 639
BtsCI GGATG 6 cut(s) 78, 239, 526, 760, 1315, 1390
Cac8I GCNNGC 4 cut(s) 96, 383, 672, 1371
Cfr13I GGNCC 5 cut(s) 15, 52, 223, 416, 923
Cfr42I CCGCGG 1 cut(s) 642
Csp6I GTAC 2 cut(s) 505, 608
CviAII CATG 4 cut(s) 220, 605, 671, 1198
CviQI GTAC 2 cut(s) 505, 608
DdeI CTNAG 4 cut(s) 129, 440, 1204, 1258
DpnI GATC 8 cut(s) 68, 570, 811, 1091, 1153, 1164, 1246, 1265
DpnII GATC 8 cut(s) 66, 568, 809, 1089, 1151, 1162, 1244, 1263
EaeI YGGCCR 2 cut(s) 816, 1294
Eam1104I CTCTTC 2 cut(s) 331, 1057
EarI CTCTTC 2 cut(s) 331, 1057
Ecl136II GAGCTC 1 cut(s) 460
Eco130I CCWWGG 1 cut(s) 18
Eco24I GRGCYC 1 cut(s) 462
Eco47I GGWCC 5 cut(s) 15, 52, 223, 416, 923
Eco53kI GAGCTC 1 cut(s) 460
Eco57I CTGAAG 4 cut(s) 164, 312, 819, 1078
EcoICRI GAGCTC 1 cut(s) 460
EcoNI CCTNNNNNAGG 1 cut(s) 778
EcoO109I RGGNCCY 1 cut(s) 52
EcoRI GAATTC 1 cut(s) 1075
EcoT14I CCWWGG 1 cut(s) 18
EcoT22I ATGCAT 3 cut(s) 177, 676, 998
EcoT38I GRGCYC 1 cut(s) 462
ErhI CCWWGG 1 cut(s) 18
FaeI CATG 4 cut(s) 223, 608, 674, 1201
FaqI GGGAC 2 cut(s) 628, 1067
FatI CATG 4 cut(s) 219, 604, 670, 1197
FauI CCCGC 1 cut(s) 497
FauNDI CATATG 3 cut(s) 682, 749, 1129
FblI GTMKAC 1 cut(s) 715
Fnu4HI GCNGC 8 cut(s) 34, 37, 168, 668, 1219, 1356, 1359, 1362
FokI GGATG 6 cut(s) 65, 226, 533, 747, 1322, 1377
FriOI GRGCYC 1 cut(s) 462
Fsp4HI GCNGC 8 cut(s) 34, 37, 168, 668, 1219, 1356, 1359, 1362
GluI GCNGC 8 cut(s) 34, 37, 168, 668, 1219, 1356, 1359, 1362
HaeIII GGCC 4 cut(s) 818, 949, 1233, 1296
HapII CCGG 1 cut(s) 1104
Hin1II CATG 4 cut(s) 223, 608, 674, 1201
HincII GTYRAC 1 cut(s) 151
HindII GTYRAC 1 cut(s) 151
HinfI GANTC 3 cut(s) 398, 449, 977
HpaII CCGG 1 cut(s) 1104
HphI GGTGA 2 cut(s) 76, 904
Hpy166II GTNNAC 2 cut(s) 151, 716
Hpy188I TCNGA 1 cut(s) 1156
Hpy188III TCNNGA 8 cut(s) 87, 252, 411, 455, 562, 981, 1302, 1315
Hpy8I GTNNAC 2 cut(s) 151, 716
Hpy99I CGWCG 1 cut(s) 633
HpyAV CCTTC 6 cut(s) 43, 477, 889, 1142, 1223, 1312
HpyCH4III ACNGT 3 cut(s) 64, 320, 509
HpyF10VI GCNNNNNNNGC 6 cut(s) 42, 181, 387, 993, 1361, 1370
HpyF3I CTNAG 4 cut(s) 129, 440, 1204, 1258
Hsp92II CATG 4 cut(s) 223, 608, 674, 1201
KspI CCGCGG 1 cut(s) 642
Kzo9I GATC 8 cut(s) 66, 568, 809, 1089, 1151, 1162, 1244, 1263
LmnI GCTCC 3 cut(s) 205, 465, 1014
Lsp1109I GCAGC 7 cut(s) 48, 154, 679, 1230, 1342, 1345, 1373
LweI GCATC 4 cut(s) 184, 248, 511, 817
MaeIII GTNAC 1 cut(s) 1270
MalI GATC 8 cut(s) 68, 570, 811, 1091, 1153, 1164, 1246, 1265
MbiI CCGCTC 1 cut(s) 33
MboI GATC 8 cut(s) 66, 568, 809, 1089, 1151, 1162, 1244, 1263
MboII GAAGA 4 cut(s) 170, 318, 1074, 1084
MfeI CAATTG 1 cut(s) 955
MflI RGATCY 3 cut(s) 809, 1089, 1263
MhlI GDGCHC 2 cut(s) 462, 1011
MlsI TGGCCA 2 cut(s) 818, 1296
MluCI AATT 5 cut(s) 478, 799, 955, 1075, 1135
MluNI TGGCCA 2 cut(s) 818, 1296
MlyI GAGTC 2 cut(s) 392, 971
MmeI TCCRAC 1 cut(s) 275
Mox20I TGGCCA 2 cut(s) 818, 1296
Mph1103I ATGCAT 3 cut(s) 177, 676, 998
MroXI GAANNNNTTC 1 cut(s) 1322
MscI TGGCCA 2 cut(s) 818, 1296
MseI TTAA 8 cut(s) 257, 393, 477, 549, 659, 789, 798, 1209
MslI CAYNNNNRTG 1 cut(s) 194
Msp20I TGGCCA 2 cut(s) 818, 1296
MspA1I CMGCKG 1 cut(s) 641
MspI CCGG 1 cut(s) 1104
MunI CAATTG 1 cut(s) 955
MvnI CGCG 1 cut(s) 641
MwoI GCNNNNNNNGC 6 cut(s) 42, 181, 387, 993, 1361, 1370
NdeI CATATG 3 cut(s) 682, 749, 1129
NdeII GATC 8 cut(s) 66, 568, 809, 1089, 1151, 1162, 1244, 1263
NlaIII CATG 4 cut(s) 223, 608, 674, 1201
NlaIV GGNNCC 2 cut(s) 207, 645
NmuCI GTSAC 1 cut(s) 1270
NsiI ATGCAT 3 cut(s) 177, 676, 998
NspI RCATGY 1 cut(s) 674
PaeI GCATGC 1 cut(s) 674
PdmI GAANNNNTTC 1 cut(s) 1322
PfeI GAWTC 1 cut(s) 449
PkrI GCNGC 8 cut(s) 35, 38, 169, 669, 1220, 1357, 1360, 1363
PleI GAGTC 2 cut(s) 392, 971
PpsI GAGTC 2 cut(s) 392, 971
PpuMI RGGWCCY 1 cut(s) 52
PshBI ATTAAT 1 cut(s) 257
Psp124BI GAGCTC 1 cut(s) 462
Psp5II RGGWCCY 1 cut(s) 52
PspN4I GGNNCC 2 cut(s) 207, 645
PspPI GGNCC 5 cut(s) 15, 52, 223, 416, 923
PspPPI RGGWCCY 1 cut(s) 52
PstI CTGCAG 1 cut(s) 1363
PsuI RGATCY 3 cut(s) 809, 1089, 1263
RsaI GTAC 2 cut(s) 506, 609
RsaNI GTAC 2 cut(s) 505, 608
RseI CAYNNNNRTG 1 cut(s) 194
SacI GAGCTC 1 cut(s) 462
SacII CCGCGG 1 cut(s) 642
SaqAI TTAA 8 cut(s) 257, 393, 477, 549, 659, 789, 798, 1209
SatI GCNGC 8 cut(s) 34, 37, 168, 668, 1219, 1356, 1359, 1362
Sau3AI GATC 8 cut(s) 66, 568, 809, 1089, 1151, 1162, 1244, 1263
Sau96I GGNCC 5 cut(s) 15, 52, 223, 416, 923
SchI GAGTC 2 cut(s) 392, 971
SduI GDGCHC 2 cut(s) 462, 1011
SfaNI GCATC 4 cut(s) 184, 248, 511, 817
SfcI CTRYAG 1 cut(s) 1359
Sfr303I CCGCGG 1 cut(s) 642
SgrBI CCGCGG 1 cut(s) 642
SinI GGWCC 5 cut(s) 15, 52, 223, 416, 923
SmiMI CAYNNNNRTG 1 cut(s) 194
SphI GCATGC 1 cut(s) 674
Sse9I AATT 5 cut(s) 478, 799, 955, 1075, 1135
SsiI CCGC 4 cut(s) 33, 490, 639, 641
SspI AATATT 2 cut(s) 248, 553
SstI GAGCTC 1 cut(s) 462
StyI CCWWGG 1 cut(s) 18
TaaI ACNGT 3 cut(s) 64, 320, 509
TaqI TCGA 8 cut(s) 29, 47, 88, 268, 726, 1247, 1303, 1314
TasI AATT 5 cut(s) 478, 799, 955, 1075, 1135
TatI WGTACW 1 cut(s) 607
TauI GCSGC 1 cut(s) 36
TfiI GAWTC 1 cut(s) 449
Tru1I TTAA 8 cut(s) 257, 393, 477, 549, 659, 789, 798, 1209
Tru9I TTAA 8 cut(s) 257, 393, 477, 549, 659, 789, 798, 1209
TseFI GTSAC 1 cut(s) 1270
TseI GCWGC 7 cut(s) 36, 167, 667, 1218, 1355, 1358, 1361
Tsp45I GTSAC 1 cut(s) 1270
TspDTI ATGAA 4 cut(s) 576, 593, 736, 954
TspGWI ACGGA 3 cut(s) 915, 1069, 1256
VpaK11BI GGWCC 5 cut(s) 15, 52, 223, 416, 923
VspI ATTAAT 1 cut(s) 257
XagI CCTNNNNNAGG 1 cut(s) 778
XapI RAATTY 1 cut(s) 1075
XbaI TCTAGA 2 cut(s) 454, 980
XceI RCATGY 1 cut(s) 674
XmiI GTMKAC 1 cut(s) 715
XmnI GAANNNNTTC 1 cut(s) 1322
Zsp2I ATGCAT 3 cut(s) 177, 676, 998
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.