MD11G1006300.v1.1

DNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000125
Physical Location & Seq
Forward (+)
597544 .. 606161
8618 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1006300.v1.1.491

Sequence Viewer

Length: 1083 bp
ATGAAGCTCGAGAAGGAGAAAACCTTGGAGCTCTTGAAGGAGAAGAATGAGATCTTGAAGACCAAGGGGGAAGATCTCGCAATGAAGGGCCGAGAGCAAGACAAGCTTCAGATGGAGTTGAAGAAGCTGCAGAAGCTCAAGGAGTTCAAACCCACCATGGTGGAAATGGAAATGGAAGTGGAAATGGAAATGGAAATGGATATGGTGAGGAGCAATCAGAGGAGATTGGGGTACTGCTGCATGAACAATGCAAGGCTGATGGAGCTCCCCATCGAAATCTTTGACAACATCTATTTGAGGCTACCCATAAGCTGTCTTTTTACCCTTAGATGTGTCTCTAATACATCAAAGAACATAGTCGACCGCCCTTTCTTTGTTACACAGCACATGCGACATTTACTTTGGGCGAAATCTACTTTTGCTTCCGATCAGTTTATGCTTCTTGATTACCTTTTCTCTTACTCTTATCGTAGATTTGCCTTTACACCACTAAAATATGATGGCGTCAACGCTGCCTTGAAGAGAAGCGAAGATTGTGCAATCGTTTCTGATATTGTGTCCACAAAGATCGGTGTTTCATATTCTTTGAGTTTTGTTTTCTACAACTTGTTTTTCTTTCAAGATAATGGCTATAGTCGTCGTCAACCGTACAAGAAGAAAGAAAGAAGTCCATGCTTCTTAGTCAATCCTTTAAAGGGAGAAGTTCTTCCACTCCCAACCACTGACATCCAATTTCCATATAGTTTTTATAGATCGTGCAAGGAATGGTATGGTATGGGATTTGATGATATAACCAGCACTTACAAGATTCTCCGTGTTTCTGGAGATGAAGATTCGACGATATGTCAACTTAGGGCCCAAATTTATGTACTAGGTACCGGCTCGTGGCGAGAGATACCCTCAGTCCCTCCTCGTAATTTAAGCAACAACCATGCATTTGCACATGGAGACCAGCATTGGTTGCTTTATTTACCTGATCACTCAAGTTGTAATAATAGAAACGCACTCGGTATATGTTCTTTTGACTACAAGAAAGAGGAGTTTTACTCGACTATTCCTCTTCCCCGAGCACATGCAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
DUF4219 F-box FBA_3 Retrotran_gag_2

Protein Analysis

361

Amino Acids

42.24

Weight (kDa)

8.65

Isoelectric Point (pI)

43.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_3 PF08268 222 - 357 3.2e-11 F-box associated beta propeller domain
FBA_1 PF07734 225 - 358 2.7e-11 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 875
AccB1I GGYRCC 1 cut(s) 875
AccI GTMKAC 1 cut(s) 360
AciI CCGC 1 cut(s) 364
AcsI RAATTY 1 cut(s) 861
AcuI CTGAAG 1 cut(s) 92
AcyI GRCGYC 1 cut(s) 504
AfaI GTAC 4 cut(s) 233, 650, 870, 877
AfiI CCNNNNNNNGG 2 cut(s) 695, 885
AgsI TTSAA 6 cut(s) 37, 58, 121, 148, 520, 620
AhdI GACNNNNNGTC 1 cut(s) 843
AleI CACNNNNGTG 1 cut(s) 158
AluBI AGCT 7 cut(s) 7, 31, 106, 127, 136, 265, 312
AluI AGCT 7 cut(s) 7, 31, 106, 127, 136, 265, 312
Alw21I GWGCWC 3 cut(s) 33, 267, 1072
Alw26I GTCTC 2 cut(s) 340, 942
Ama87I CYCGRG 2 cut(s) 8, 1065
AoxI GGCC 2 cut(s) 88, 855
ApaI GGGCCC 1 cut(s) 859
ApeKI GCWGC 3 cut(s) 127, 237, 512
ApoI RAATTY 1 cut(s) 861
ArsI GACNNNNNNTTYG 2 cut(s) 384, 416
Asp700I GAANNNNTTC 1 cut(s) 705
Asp718I GGTACC 1 cut(s) 875
AspS9I GGNCC 3 cut(s) 88, 855, 856
AsuHPI GGTGA 1 cut(s) 217
AvaI CYCGRG 2 cut(s) 8, 1065
BaeGI GKGCMC 1 cut(s) 859
BanI GGYRCC 1 cut(s) 875
BanII GRGCYC 3 cut(s) 33, 267, 859
BauI CACGAG 1 cut(s) 883
BbsI GAAGAC 1 cut(s) 65
Bbv12I GWGCWC 3 cut(s) 33, 267, 1072
BbvI GCAGC 3 cut(s) 114, 224, 499
BccI CCATC 4 cut(s) 106, 253, 278, 494
BcgI CGANNNNNNTGC 2 cut(s) 518, 552
BclI TGATCA 1 cut(s) 976
BcoDI GTCTC 2 cut(s) 340, 942
BfaI CTAG 1 cut(s) 872
BfmI CTRYAG 2 cut(s) 128, 631
BglII AGATCT 2 cut(s) 51, 73
BisI GCNGC 3 cut(s) 128, 238, 513
BlsI GCNGC 3 cut(s) 129, 239, 514
BmeRI GACNNNNNGTC 1 cut(s) 843
BmeT110I CYCGRG 2 cut(s) 8, 1065
BmgT120I GGNCC 3 cut(s) 88, 855, 856
BmiI GGNNCC 2 cut(s) 857, 877
BpiI GAAGAC 1 cut(s) 65
BplI GAGNNNNNCTC 4 cut(s) 884, 916, 1031, 1063
BpmI CTGGAG 1 cut(s) 843
BpuEI CTTGAG 2 cut(s) 122, 967
BsaHI GRCGYC 1 cut(s) 504
BsaI GGTCTC 1 cut(s) 942
BsaJI CCNNGG 3 cut(s) 24, 63, 156
Bsc4I CCNNNNNNNGG 2 cut(s) 695, 885
Bse118I RCCGGY 1 cut(s) 878
Bse3DI GCAATG 1 cut(s) 87
BseDI CCNNGG 3 cut(s) 24, 63, 156
BseGI GGATG 1 cut(s) 726
BseLI CCNNNNNNNGG 2 cut(s) 695, 885
BseMI GCAATG 1 cut(s) 87
BseMII CTCAG 1 cut(s) 915
BseRI GAGGAG 4 cut(s) 223, 235, 900, 1052
BseSI GKGCMC 1 cut(s) 859
BseXI GCAGC 3 cut(s) 114, 224, 499
Bsh1285I CGRYCG 1 cut(s) 364
BshFI GGCC 2 cut(s) 90, 857
BshNI GGYRCC 1 cut(s) 875
BsiEI CGRYCG 1 cut(s) 364
BsiHKAI GWGCWC 3 cut(s) 33, 267, 1072
BsiHKCI CYCGRG 2 cut(s) 8, 1065
BsiSI CCGG 1 cut(s) 879
BslFI GGGAC 1 cut(s) 890
BslI CCNNNNNNNGG 2 cut(s) 695, 885
BsmAI GTCTC 2 cut(s) 340, 942
BsmFI GGGAC 1 cut(s) 890
BsnI GGCC 2 cut(s) 90, 857
Bso31I GGTCTC 1 cut(s) 942
BsoBI CYCGRG 2 cut(s) 8, 1065
Bsp120I GGGCCC 1 cut(s) 855
Bsp1286I GDGCHC 4 cut(s) 33, 267, 859, 1072
Bsp143I GATC 6 cut(s) 51, 73, 427, 567, 752, 976
Bsp19I CCATGG 1 cut(s) 156
BspACI CCGC 1 cut(s) 364
BspANI GGCC 2 cut(s) 90, 857
BspCNI CTCAG 1 cut(s) 914
BspLI GGNNCC 2 cut(s) 857, 877
BspMAI CTGCAG 1 cut(s) 132
BspT107I GGYRCC 1 cut(s) 875
BspTNI GGTCTC 1 cut(s) 942
BsrDI GCAATG 1 cut(s) 87
BsrFI RCCGGY 1 cut(s) 878
BssAI RCCGGY 1 cut(s) 878
BssECI CCNNGG 3 cut(s) 24, 63, 156
BssMI GATC 6 cut(s) 51, 73, 427, 567, 752, 976
BssNI GRCGYC 1 cut(s) 504
BssSI CACGAG 1 cut(s) 883
BssT1I CCWWGG 3 cut(s) 24, 63, 156
Bst2BI CACGAG 1 cut(s) 883
Bst4CI ACNGT 1 cut(s) 648
Bst6I CTCTTC 2 cut(s) 515, 1065
BstACI GRCGYC 1 cut(s) 504
BstAPI GCANNNNNTGC 1 cut(s) 961
BstDEI CTNAG 4 cut(s) 326, 679, 851, 901
BstDSI CCRYGG 1 cut(s) 156
BstF5I GGATG 1 cut(s) 726
BstKTI GATC 6 cut(s) 54, 76, 430, 570, 755, 979
BstMAI GTCTC 2 cut(s) 340, 942
BstMBI GATC 6 cut(s) 51, 73, 427, 567, 752, 976
BstMCI CGRYCG 1 cut(s) 364
BstMWI GCNNNNNNNGC 4 cut(s) 103, 133, 262, 961
BstNSI RCATGY 2 cut(s) 391, 1076
BstSFI CTRYAG 2 cut(s) 128, 631
BstSLI GKGCMC 1 cut(s) 859
BstV1I GCAGC 3 cut(s) 114, 224, 499
BstV2I GAAGAC 1 cut(s) 65
BstX2I RGATCY 2 cut(s) 51, 73
BstXI CCANNNNNNTGG 1 cut(s) 160
BstYI RGATCY 2 cut(s) 51, 73
BsuRI GGCC 2 cut(s) 90, 857
BtgI CCRYGG 1 cut(s) 156
BtsCI GGATG 1 cut(s) 726
BtsIMutI CAGTG 1 cut(s) 720
Cfr10I RCCGGY 1 cut(s) 878
Cfr13I GGNCC 3 cut(s) 88, 855, 856
CseI GACGC 1 cut(s) 493
Csp6I GTAC 4 cut(s) 232, 649, 869, 876
CviAII CATG 7 cut(s) 157, 241, 388, 672, 932, 944, 1073
CviQI GTAC 4 cut(s) 232, 649, 869, 876
DdeI CTNAG 4 cut(s) 326, 679, 851, 901
DpnI GATC 6 cut(s) 53, 75, 429, 569, 754, 978
DpnII GATC 6 cut(s) 51, 73, 427, 567, 752, 976
DraI TTTAAA 1 cut(s) 693
DriI GACNNNNNGTC 1 cut(s) 843
Eam1104I CTCTTC 2 cut(s) 515, 1065
Eam1105I GACNNNNNGTC 1 cut(s) 843
EarI CTCTTC 2 cut(s) 515, 1065
Ecl136II GAGCTC 2 cut(s) 31, 265
Eco130I CCWWGG 3 cut(s) 24, 63, 156
Eco24I GRGCYC 3 cut(s) 33, 267, 859
Eco31I GGTCTC 1 cut(s) 942
Eco53kI GAGCTC 2 cut(s) 31, 265
Eco57I CTGAAG 1 cut(s) 92
Eco88I CYCGRG 2 cut(s) 8, 1065
EcoICRI GAGCTC 2 cut(s) 31, 265
EcoO109I RGGNCCY 1 cut(s) 855
EcoT14I CCWWGG 3 cut(s) 24, 63, 156
EcoT22I ATGCAT 1 cut(s) 937
EcoT38I GRGCYC 3 cut(s) 33, 267, 859
ErhI CCWWGG 3 cut(s) 24, 63, 156
FaeI CATG 7 cut(s) 160, 244, 391, 675, 935, 947, 1076
FalI AAGNNNNNCTT 2 cut(s) 90, 122
FaqI GGGAC 1 cut(s) 890
FatI CATG 7 cut(s) 156, 240, 387, 671, 931, 943, 1072
FbaI TGATCA 1 cut(s) 976
FblI GTMKAC 1 cut(s) 360
Fnu4HI GCNGC 3 cut(s) 128, 238, 513
FokI GGATG 1 cut(s) 713
FriOI GRGCYC 3 cut(s) 33, 267, 859
Fsp4HI GCNGC 3 cut(s) 128, 238, 513
FspBI CTAG 1 cut(s) 872
GluI GCNGC 3 cut(s) 128, 238, 513
GsuI CTGGAG 1 cut(s) 843
HaeIII GGCC 2 cut(s) 90, 857
HapII CCGG 1 cut(s) 879
HgaI GACGC 1 cut(s) 493
Hin1I GRCGYC 1 cut(s) 504
Hin1II CATG 7 cut(s) 160, 244, 391, 675, 935, 947, 1076
HincII GTYRAC 4 cut(s) 361, 508, 644, 848
HindII GTYRAC 4 cut(s) 361, 508, 644, 848
HindIII AAGCTT 1 cut(s) 104
HinfI GANTC 2 cut(s) 808, 833
HpaII CCGG 1 cut(s) 879
HphI GGTGA 1 cut(s) 217
Hpy166II GTNNAC 5 cut(s) 361, 508, 561, 644, 848
Hpy188I TCNGA 4 cut(s) 111, 219, 427, 550
Hpy188III TCNNGA 6 cut(s) 10, 34, 55, 443, 620, 822
Hpy8I GTNNAC 5 cut(s) 361, 508, 561, 644, 848
Hpy99I CGWCG 2 cut(s) 642, 841
HpyAV CCTTC 3 cut(s) 7, 31, 79
HpyCH4III ACNGT 1 cut(s) 648
HpyCH4V TGCA 8 cut(s) 130, 240, 251, 539, 759, 935, 941, 1076
HpyF10VI GCNNNNNNNGC 4 cut(s) 103, 133, 262, 961
HpyF3I CTNAG 4 cut(s) 326, 679, 851, 901
Hsp92I GRCGYC 1 cut(s) 504
Hsp92II CATG 7 cut(s) 160, 244, 391, 675, 935, 947, 1076
KpnI GGTACC 1 cut(s) 879
Ksp22I TGATCA 1 cut(s) 976
Kzo9I GATC 6 cut(s) 51, 73, 427, 567, 752, 976
LmnI GCTCC 4 cut(s) 28, 210, 262, 270
LpnPI CCDG 5 cut(s) 807, 808, 892, 965, 987
Lsp1109I GCAGC 3 cut(s) 114, 224, 499
MaeI CTAG 1 cut(s) 872
MaeIII GTNAC 1 cut(s) 376
MalI GATC 6 cut(s) 53, 75, 429, 569, 754, 978
MboI GATC 6 cut(s) 51, 73, 427, 567, 752, 976
MflI RGATCY 2 cut(s) 51, 73
MhlI GDGCHC 4 cut(s) 33, 267, 859, 1072
MluCI AATT 3 cut(s) 731, 861, 916
MnlI CCTC 8 cut(s) 201, 213, 291, 910, 918, 921, 1030, 1068
Mph1103I ATGCAT 1 cut(s) 937
MroXI GAANNNNTTC 1 cut(s) 705
MseI TTAA 2 cut(s) 692, 920
MslI CAYNNNNRTG 1 cut(s) 158
MspI CCGG 1 cut(s) 879
MwoI GCNNNNNNNGC 4 cut(s) 103, 133, 262, 961
NcoI CCATGG 1 cut(s) 156
NdeII GATC 6 cut(s) 51, 73, 427, 567, 752, 976
NlaIII CATG 7 cut(s) 160, 244, 391, 675, 935, 947, 1076
NlaIV GGNNCC 2 cut(s) 857, 877
NmeAIII GCCGAG 1 cut(s) 116
NsiI ATGCAT 1 cut(s) 937
NspI RCATGY 2 cut(s) 391, 1076
OliI CACNNNNGTG 1 cut(s) 158
PaeR7I CTCGAG 1 cut(s) 8
PdmI GAANNNNTTC 1 cut(s) 705
PfeI GAWTC 2 cut(s) 808, 833
PkrI GCNGC 3 cut(s) 129, 239, 514
Psp124BI GAGCTC 2 cut(s) 33, 267
PspN4I GGNNCC 2 cut(s) 857, 877
PspOMI GGGCCC 1 cut(s) 855
PspPI GGNCC 3 cut(s) 88, 855, 856
PstI CTGCAG 1 cut(s) 132
PsuI RGATCY 2 cut(s) 51, 73
RsaI GTAC 4 cut(s) 233, 650, 870, 877
RsaNI GTAC 4 cut(s) 232, 649, 869, 876
RseI CAYNNNNRTG 1 cut(s) 158
SacI GAGCTC 2 cut(s) 33, 267
SalI GTCGAC 1 cut(s) 359
SaqAI TTAA 2 cut(s) 692, 920
SatI GCNGC 3 cut(s) 128, 238, 513
Sau3AI GATC 6 cut(s) 51, 73, 427, 567, 752, 976
Sau96I GGNCC 3 cut(s) 88, 855, 856
SduI GDGCHC 4 cut(s) 33, 267, 859, 1072
SfcI CTRYAG 2 cut(s) 128, 631
Sfr274I CTCGAG 1 cut(s) 8
SlaI CTCGAG 1 cut(s) 8
SmiMI CAYNNNNRTG 1 cut(s) 158
SmlI CTYRAG 3 cut(s) 8, 137, 982
SmoI CTYRAG 3 cut(s) 8, 137, 982
Sse9I AATT 3 cut(s) 731, 861, 916
SsiI CCGC 1 cut(s) 364
SspMI CTAG 1 cut(s) 872
SstI GAGCTC 2 cut(s) 33, 267
StyI CCWWGG 3 cut(s) 24, 63, 156
TaaI ACNGT 1 cut(s) 648
TaqI TCGA 5 cut(s) 9, 273, 360, 836, 1049
TasI AATT 3 cut(s) 731, 861, 916
TatI WGTACW 1 cut(s) 868
TfiI GAWTC 2 cut(s) 808, 833
Tru1I TTAA 2 cut(s) 692, 920
Tru9I TTAA 2 cut(s) 692, 920
TscAI CASTG 1 cut(s) 727
TseI GCWGC 3 cut(s) 127, 237, 512
TspDTI ATGAA 5 cut(s) 17, 98, 257, 567, 843
TspGWI ACGGA 1 cut(s) 803
TspRI CASTG 1 cut(s) 727
XapI RAATTY 1 cut(s) 861
XceI RCATGY 2 cut(s) 391, 1076
XcmI CCANNNNNNNNNTGG 1 cut(s) 163
XhoI CTCGAG 1 cut(s) 8
XmiI GTMKAC 1 cut(s) 360
XmnI GAANNNNTTC 1 cut(s) 705
XspI CTAG 1 cut(s) 872
Zsp2I ATGCAT 1 cut(s) 937
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.