FvH4_1g20161

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000125
Physical Location & Seq
Reverse (-)
12381302 .. 12385982
4681 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g20161.t1

Sequence Viewer

Length: 1416 bp
ATGACGAGTGTGATTCCTACACCGGCTGAAATAGACTCTATCGTTGAGAAATTCGACGCTAGAGTTGAGAAGAAAGTGGAGGCACTGAACCGCAACCTGAGGAATCAACCTTGGAGAAGAAGGTTGGTCAAATCGGTTTCGGATATCTTAGGACAGTGTAGAGAGGAATTGACCAAGGACTCTTATGATTACAGACGCCGTTGTGAAAAGCACCTTGAGGAGAGTTTAAAAATTGTCAAGGCAGATGTTTCCGAATTTAGAAAAGAACTACCAAGTGGAATAAATGTGAATGTAGTCTTGGAAAATAAAGCCGACCTTTCAGCCAAAATCAACGATATTCTAAAACAAAAAAAGACATTGACGGAGTTATCCGAAGATGGCACCGGCGAGTCTGATGGAAACTCGAGCTATGGCGATCCAAACACAAACGTAACAACATTAATGGACCTCCCAGTAGATGTCACCGTCGATATCCTTACGAGACTGCCGGCAGAATCACTCTGTCGCTTCCAATGTGTGTCTAGGACCTCTTTCGACATATCTCGCAGCCCCGAATTTGCTGCACTGCGCAACCTGCGCTTACACGAATCTGCTGTGGACCCGCTTATGCGTGTTACTGCATGGCATGGGTGCAATTGTGTTGTGGCTCAAGTTCTTGTATTAGGTACAAGCTCATGGAGACAGATACATTTGGCTCCTCCTTTTGATGTAAGCAGTTCTTTTTGGGGCAAACGCAGGAAGAATGCAACATATGTAGGTGGACACATGCATTGGTTGATTTACAAAACAAAGAAAAGCCCCGGTTGCATAATTTCATTCAATTTTAACACAGAAGAATTCTATGCGACTGTAGTTCCCTCGAGTAATAATGGCTTAAAGTTGCTTAAATTTAGAGGATCTTTGGCTGTTGTGGATCTTCATCCAGATGAAGATAATATCAAGATATGGGTGTTGAAAAGTTTTGATGATGAGAAAAAATGGGAGCTACATCACAATATGACGATGAAATGCCTCCCAACATGGACTTGTTCTGAAGAGATTTGTGCTGAATGGGAGCATGGCATATGTTTTGCATCAGGCTATGAATGTTGCTTTTTGGACCTGAGAAATCTTTCTATGAAAATAGAACGACTCCCCACATATTCTACTCTTGCTTTTTGGCCAACCATCTTTGATCCTTCTTTTTGGACAGGACAATGTTTGGTTTCCAGCATCTTCAGCTATACTGAAAGCCTAATTTCACTGAAAAACTATGGCAGGTTACAGAAGCAAGGCAAGGAGATTGAACATGTAGAGAATGTCGATGATCTTGATCTTGATGATAGTTACACTGTCAGTGATCCTGCTTGTTTAAAAAATAATACTGCAATCTCCCGCATCAGACCATCAGAAGCAGGAAAGTTTAGGCATGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_3

Protein Analysis

472

Amino Acids

53.65

Weight (kDa)

6.34

Isoelectric Point (pI)

45.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 147 - 186 2.2e-06 F-box domain
FBA_3 PF08268 215 - 332 1.1e-11 F-box associated beta propeller domain
FBA_1 PF07734 222 - 333 1.8e-08 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 569
Acc36I ACCTGC 2 cut(s) 582, 1248
AccB1I GGYRCC 1 cut(s) 380
AciI CCGC 3 cut(s) 91, 602, 1375
AclWI GGATC 5 cut(s) 410, 904, 921, 1169, 1334
AcoI YGGCCR 1 cut(s) 1160
AcsI RAATTY 5 cut(s) 50, 254, 554, 836, 887
AcuI CTGAAG 2 cut(s) 1053, 1201
AcyI GRCGYC 1 cut(s) 196
AfaI GTAC 1 cut(s) 667
AflIII ACRYGT 1 cut(s) 1288
AgsI TTSAA 3 cut(s) 820, 955, 1286
AjuI GAANNNNNNNTTGG 2 cut(s) 281, 313
AluBI AGCT 4 cut(s) 408, 672, 985, 1221
AluI AGCT 4 cut(s) 408, 672, 985, 1221
Alw26I GTCTC 2 cut(s) 475, 673
AlwI GGATC 5 cut(s) 410, 904, 921, 1169, 1334
Ama87I CYCGRG 2 cut(s) 403, 859
AoxI GGCC 1 cut(s) 1160
ApeKI GCWGC 2 cut(s) 546, 560
ApoI RAATTY 5 cut(s) 50, 254, 554, 836, 887
AseI ATTAAT 1 cut(s) 440
Asp700I GAANNNNTTC 1 cut(s) 1111
AspLEI GCGC 2 cut(s) 570, 579
AspS9I GGNCC 4 cut(s) 445, 525, 598, 1099
AsuC2I CCSGG 1 cut(s) 801
AsuHPI GGTGA 1 cut(s) 454
AvaI CYCGRG 2 cut(s) 403, 859
AvaII GGWCC 4 cut(s) 445, 525, 598, 1099
AxyI CCTNAGG 1 cut(s) 98
BalI TGGCCA 1 cut(s) 1162
BanI GGYRCC 1 cut(s) 380
BbvI GCAGC 2 cut(s) 547, 558
BccI CCATC 4 cut(s) 371, 389, 1175, 1393
BceAI ACGGC 1 cut(s) 183
BcgI CGANNNNNNTGC 2 cut(s) 542, 576
BcnI CCSGG 1 cut(s) 801
BcoDI GTCTC 2 cut(s) 475, 673
BfaI CTAG 2 cut(s) 60, 522
BfmI CTRYAG 1 cut(s) 849
BfuAI ACCTGC 2 cut(s) 582, 1248
BisI GCNGC 2 cut(s) 547, 561
BlsI GCNGC 2 cut(s) 548, 562
Bme1390I CCNGG 1 cut(s) 801
Bme18I GGWCC 4 cut(s) 445, 525, 598, 1099
BmeT110I CYCGRG 2 cut(s) 403, 859
BmgT120I GGNCC 4 cut(s) 445, 525, 598, 1099
BmiI GGNNCC 3 cut(s) 382, 600, 696
BmrFI CCNGG 1 cut(s) 801
BmrI ACTGGG 1 cut(s) 446
BmsI GCATC 3 cut(s) 1082, 1221, 1386
BmuI ACTGGG 1 cut(s) 446
BpuEI CTTGAG 2 cut(s) 236, 633
BpuMI CCSGG 1 cut(s) 801
BsaBI GATNNNNATC 2 cut(s) 918, 1311
BsaHI GRCGYC 1 cut(s) 196
BsaJI CCNNGG 3 cut(s) 110, 174, 799
Bse118I RCCGGY 3 cut(s) 22, 383, 487
Bse1I ACTGG 1 cut(s) 452
Bse21I CCTNAGG 1 cut(s) 98
Bse8I GATNNNNATC 2 cut(s) 918, 1311
BseDI CCNNGG 3 cut(s) 110, 174, 799
BseGI GGATG 1 cut(s) 919
BseJI GATNNNNATC 2 cut(s) 918, 1311
BseMII CTCAG 2 cut(s) 89, 1094
BseNI ACTGG 1 cut(s) 452
BseRI GAGGAG 2 cut(s) 233, 687
BseXI GCAGC 2 cut(s) 547, 558
BsgI GTGCAG 1 cut(s) 546
BshFI GGCC 1 cut(s) 1162
BshNI GGYRCC 1 cut(s) 380
BsiHKCI CYCGRG 2 cut(s) 403, 859
BsiSI CCGG 4 cut(s) 23, 384, 488, 801
BsmAI GTCTC 2 cut(s) 475, 673
BsmI GAATGC 1 cut(s) 748
BsnI GGCC 1 cut(s) 1162
BsoBI CYCGRG 2 cut(s) 403, 859
Bsp143I GATC 7 cut(s) 415, 896, 913, 1174, 1306, 1312, 1339
BspACI CCGC 3 cut(s) 91, 602, 1375
BspANI GGCC 1 cut(s) 1162
BspCNI CTCAG 2 cut(s) 90, 1095
BspLI GGNNCC 3 cut(s) 382, 600, 696
BspMI ACCTGC 2 cut(s) 582, 1248
BspPI GGATC 5 cut(s) 410, 904, 921, 1169, 1334
BspT107I GGYRCC 1 cut(s) 380
BsrFI RCCGGY 3 cut(s) 22, 383, 487
BsrI ACTGG 1 cut(s) 452
BssAI RCCGGY 3 cut(s) 22, 383, 487
BssECI CCNNGG 3 cut(s) 110, 174, 799
BssMI GATC 7 cut(s) 415, 896, 913, 1174, 1306, 1312, 1339
BssNI GRCGYC 1 cut(s) 196
BssT1I CCWWGG 2 cut(s) 110, 174
Bst4CI ACNGT 4 cut(s) 156, 466, 850, 1333
Bst6I CTCTTC 1 cut(s) 1029
BstACI GRCGYC 1 cut(s) 196
BstC8I GCNNGC 1 cut(s) 489
BstDEI CTNAG 3 cut(s) 98, 148, 1103
BstF5I GGATG 1 cut(s) 919
BstHHI GCGC 2 cut(s) 570, 579
BstKTI GATC 7 cut(s) 418, 899, 916, 1177, 1309, 1315, 1342
BstMAI GTCTC 2 cut(s) 475, 673
BstMBI GATC 7 cut(s) 415, 896, 913, 1174, 1306, 1312, 1339
BstMWI GCNNNNNNNGC 4 cut(s) 574, 576, 804, 1218
BstNSI RCATGY 2 cut(s) 769, 1292
BstSCI CCNGG 1 cut(s) 799
BstSFI CTRYAG 1 cut(s) 849
BstV1I GCAGC 2 cut(s) 547, 558
BstX2I RGATCY 2 cut(s) 896, 913
BstYI RGATCY 2 cut(s) 896, 913
Bsu36I CCTNAGG 1 cut(s) 98
BsuRI GGCC 1 cut(s) 1162
BtsCI GGATG 1 cut(s) 919
BtsI GCAGTG 1 cut(s) 563
BtsIMutI CAGTG 6 cut(s) 83, 161, 563, 1241, 1329, 1342
BveI ACCTGC 2 cut(s) 582, 1248
Cac8I GCNNGC 1 cut(s) 489
CfoI GCGC 2 cut(s) 570, 579
Cfr10I RCCGGY 3 cut(s) 22, 383, 487
Cfr13I GGNCC 4 cut(s) 445, 525, 598, 1099
CseI GACGC 2 cut(s) 65, 204
Csp6I GTAC 1 cut(s) 666
CviAII CATG 8 cut(s) 621, 626, 675, 766, 1020, 1058, 1289, 1409
CviQI GTAC 1 cut(s) 666
DdeI CTNAG 3 cut(s) 98, 148, 1103
DpnI GATC 7 cut(s) 417, 898, 915, 1176, 1308, 1314, 1341
DpnII GATC 7 cut(s) 415, 896, 913, 1174, 1306, 1312, 1339
DraI TTTAAA 2 cut(s) 228, 1353
EaeI YGGCCR 1 cut(s) 1160
Eam1104I CTCTTC 1 cut(s) 1029
EarI CTCTTC 1 cut(s) 1029
Eco130I CCWWGG 2 cut(s) 110, 174
Eco32I GATATC 2 cut(s) 145, 472
Eco47I GGWCC 4 cut(s) 445, 525, 598, 1099
Eco57I CTGAAG 2 cut(s) 1053, 1201
Eco81I CCTNAGG 1 cut(s) 98
Eco88I CYCGRG 2 cut(s) 403, 859
EcoO109I RGGNCCY 1 cut(s) 525
EcoRI GAATTC 1 cut(s) 836
EcoRV GATATC 2 cut(s) 145, 472
EcoT14I CCWWGG 2 cut(s) 110, 174
EcoT22I ATGCAT 1 cut(s) 771
ErhI CCWWGG 2 cut(s) 110, 174
FaeI CATG 8 cut(s) 624, 629, 678, 769, 1023, 1061, 1292, 1412
FalI AAGNNNNNCTT 4 cut(s) 300, 332, 703, 735
FatI CATG 8 cut(s) 620, 625, 674, 765, 1019, 1057, 1288, 1408
FauI CCCGC 2 cut(s) 609, 1382
FauNDI CATATG 2 cut(s) 751, 1064
Fnu4HI GCNGC 2 cut(s) 547, 561
FokI GGATG 1 cut(s) 906
Fsp4HI GCNGC 2 cut(s) 547, 561
FspBI CTAG 2 cut(s) 60, 522
FspI TGCGCA 1 cut(s) 569
GlaI GCGC 2 cut(s) 569, 578
GluI GCNGC 2 cut(s) 547, 561
HaeIII GGCC 1 cut(s) 1162
HapII CCGG 4 cut(s) 23, 384, 488, 801
HgaI GACGC 2 cut(s) 65, 204
HhaI GCGC 2 cut(s) 570, 579
Hin1I GRCGYC 1 cut(s) 196
Hin1II CATG 8 cut(s) 624, 629, 678, 769, 1023, 1061, 1292, 1412
Hin6I GCGC 2 cut(s) 568, 577
HinP1I GCGC 2 cut(s) 568, 577
HinfI GANTC 8 cut(s) 13, 35, 103, 179, 389, 494, 587, 1131
HpaII CCGG 4 cut(s) 23, 384, 488, 801
HphI GGTGA 1 cut(s) 454
Hpy166II GTNNAC 2 cut(s) 598, 761
Hpy188I TCNGA 7 cut(s) 142, 253, 373, 394, 1033, 1382, 1390
Hpy188III TCNNGA 4 cut(s) 923, 940, 1310, 1316
Hpy8I GTNNAC 2 cut(s) 598, 761
Hpy99I CGWCG 2 cut(s) 59, 470
HpyAV CCTTC 2 cut(s) 114, 1188
HpyCH4III ACNGT 4 cut(s) 156, 466, 850, 1333
HpyCH4IV ACGT 1 cut(s) 429
HpyCH4V TGCA 8 cut(s) 563, 620, 633, 746, 769, 807, 1073, 1367
HpyF10VI GCNNNNNNNGC 4 cut(s) 574, 576, 804, 1218
HpyF3I CTNAG 3 cut(s) 98, 148, 1103
HpySE526I ACGT 1 cut(s) 429
Hsp92I GRCGYC 1 cut(s) 196
Hsp92II CATG 8 cut(s) 624, 629, 678, 769, 1023, 1061, 1292, 1412
HspAI GCGC 2 cut(s) 568, 577
KroI GCCGGC 1 cut(s) 487
KroNI GCCGGC 1 cut(s) 489
Kzo9I GATC 7 cut(s) 415, 896, 913, 1174, 1306, 1312, 1339
LmnI GCTCC 3 cut(s) 700, 982, 1054
Lsp1109I GCAGC 2 cut(s) 547, 558
LweI GCATC 3 cut(s) 1082, 1221, 1386
MaeI CTAG 2 cut(s) 60, 522
MaeII ACGT 1 cut(s) 429
MaeIII GTNAC 5 cut(s) 430, 460, 613, 1260, 1325
MalI GATC 7 cut(s) 417, 898, 915, 1176, 1308, 1314, 1341
MboI GATC 7 cut(s) 415, 896, 913, 1174, 1306, 1312, 1339
MboII GAAGA 9 cut(s) 82, 129, 386, 751, 845, 908, 941, 1046, 1207
MfeI CAATTG 1 cut(s) 634
MflI RGATCY 2 cut(s) 896, 913
MlsI TGGCCA 1 cut(s) 1162
MluNI TGGCCA 1 cut(s) 1162
MlyI GAGTC 4 cut(s) 29, 173, 398, 1125
Mox20I TGGCCA 1 cut(s) 1162
Mph1103I ATGCAT 1 cut(s) 771
MroNI GCCGGC 1 cut(s) 487
MroXI GAANNNNTTC 1 cut(s) 1111
MscI TGGCCA 1 cut(s) 1162
MseI TTAA 6 cut(s) 227, 440, 825, 875, 885, 1352
MslI CAYNNNNRTG 1 cut(s) 924
Msp20I TGGCCA 1 cut(s) 1162
MspI CCGG 4 cut(s) 23, 384, 488, 801
MspR9I CCNGG 1 cut(s) 801
MunI CAATTG 1 cut(s) 634
Mva1269I GAATGC 1 cut(s) 748
MwoI GCNNNNNNNGC 4 cut(s) 574, 576, 804, 1218
NaeI GCCGGC 1 cut(s) 489
NciI CCSGG 1 cut(s) 801
NdeI CATATG 2 cut(s) 751, 1064
NdeII GATC 7 cut(s) 415, 896, 913, 1174, 1306, 1312, 1339
NgoMIV GCCGGC 1 cut(s) 487
NlaIII CATG 8 cut(s) 624, 629, 678, 769, 1023, 1061, 1292, 1412
NlaIV GGNNCC 3 cut(s) 382, 600, 696
NmuCI GTSAC 1 cut(s) 460
NsbI TGCGCA 1 cut(s) 569
NsiI ATGCAT 1 cut(s) 771
NspI RCATGY 2 cut(s) 769, 1292
PaeR7I CTCGAG 2 cut(s) 403, 859
PciI ACATGT 1 cut(s) 1288
PctI GAATGC 1 cut(s) 748
PdiI GCCGGC 1 cut(s) 489
PdmI GAANNNNTTC 1 cut(s) 1111
PfeI GAWTC 4 cut(s) 13, 103, 494, 587
PkrI GCNGC 2 cut(s) 548, 562
PleI GAGTC 4 cut(s) 29, 173, 397, 1125
PpsI GAGTC 4 cut(s) 29, 173, 397, 1125
PpuMI RGGWCCY 1 cut(s) 525
PscI ACATGT 1 cut(s) 1288
PshBI ATTAAT 1 cut(s) 440
Psp5II RGGWCCY 1 cut(s) 525
PspN4I GGNNCC 3 cut(s) 382, 600, 696
PspPI GGNCC 4 cut(s) 445, 525, 598, 1099
PspPPI RGGWCCY 1 cut(s) 525
PspXI VCTCGAGB 2 cut(s) 403, 859
PsuI RGATCY 2 cut(s) 896, 913
RsaI GTAC 1 cut(s) 667
RsaNI GTAC 1 cut(s) 666
RseI CAYNNNNRTG 1 cut(s) 924
SaqAI TTAA 6 cut(s) 227, 440, 825, 875, 885, 1352
SatI GCNGC 2 cut(s) 547, 561
Sau3AI GATC 7 cut(s) 415, 896, 913, 1174, 1306, 1312, 1339
Sau96I GGNCC 4 cut(s) 445, 525, 598, 1099
SchI GAGTC 4 cut(s) 29, 173, 398, 1125
ScrFI CCNGG 1 cut(s) 801
SfaNI GCATC 3 cut(s) 1082, 1221, 1386
SfcI CTRYAG 1 cut(s) 849
Sfr274I CTCGAG 2 cut(s) 403, 859
SgrAI CRCCGGYG 1 cut(s) 383
SinI GGWCC 4 cut(s) 445, 525, 598, 1099
SlaI CTCGAG 2 cut(s) 403, 859
SmiMI CAYNNNNRTG 1 cut(s) 924
SmlI CTYRAG 4 cut(s) 215, 403, 648, 859
SmoI CTYRAG 4 cut(s) 215, 403, 648, 859
SsiI CCGC 3 cut(s) 91, 602, 1375
SspMI CTAG 2 cut(s) 60, 522
StyD4I CCNGG 1 cut(s) 799
StyI CCWWGG 2 cut(s) 110, 174
TaaI ACNGT 4 cut(s) 156, 466, 850, 1333
TaiI ACGT 1 cut(s) 432
TaqI TCGA 6 cut(s) 54, 404, 468, 534, 860, 1302
TfiI GAWTC 4 cut(s) 13, 103, 494, 587
Tru1I TTAA 6 cut(s) 227, 440, 825, 875, 885, 1352
Tru9I TTAA 6 cut(s) 227, 440, 825, 875, 885, 1352
TscAI CASTG 6 cut(s) 90, 161, 570, 1248, 1336, 1342
TseFI GTSAC 1 cut(s) 460
TseI GCWGC 2 cut(s) 546, 560
Tsp45I GTSAC 1 cut(s) 460
TspDTI ATGAA 6 cut(s) 804, 908, 942, 1019, 1098, 1133
TspGWI ACGGA 1 cut(s) 377
TspRI CASTG 6 cut(s) 90, 161, 570, 1248, 1336, 1342
VpaK11BI GGWCC 4 cut(s) 445, 525, 598, 1099
VspI ATTAAT 1 cut(s) 440
XapI RAATTY 5 cut(s) 50, 254, 554, 836, 887
XceI RCATGY 2 cut(s) 769, 1292
XhoI CTCGAG 2 cut(s) 403, 859
XmnI GAANNNNTTC 1 cut(s) 1111
XspI CTAG 2 cut(s) 60, 522
Zsp2I ATGCAT 1 cut(s) 771
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.