MD12G1195600.v1.1

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
OG0000125
Physical Location & Seq
Forward (+)
27676919 .. 27678253
1335 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1195600.v1.1.491

Sequence Viewer

Length: 1335 bp
ATGTTGGAAATCATGAGAGCCAATATTGGTTGGTTGAAGAAGCTTAGACTGAGACGACGCCGGAAGCACACCTTGTTAACTGACCTACCTTTTGAAATCCTCGTCAACATCCTTTCGAGACTGCCTGTAAAGTCACTTTATCACATTCGACGTTTGTCCAAGATGTTGAAGAACATAGTTGACGACCAGTCTTTCGTTACACTTCACACGCGGTTACTTACTGCTACCAATGCTGTTGCTGAAGTACCTCAACTTATACTTATTGATAACATCGGCATGGCTTCTTTAGCGGCAGTACAATTATTCGAATACGATGGCAACTCCTCCTTGAAAGAGAGAAAACATGCAATTGTCTCAGAGATTGGATTCGACAGTTTCAACGCTCCAATCGTTCAACAATTTGTTTTCTGCAACTTGTTTTGCTTTACAGTTGGGAACTTCTGCATCTTATTTGATCCTTTTAAGGGACAAGTTTTACCACTCCCGATGAGTGACGTCCCAGTTCCCGTAGAACTCGGTTATGATGTGTACAGTATGGGATTTGATGATTTAACCAGCACCCATAAAATTATTCGTGTTTCTGCAGATATGCAGAACAATATCGTGGCCCAAGTTCTTGTCTTGGGCACAAGCTCGTGGCGGAAGATACGCTCAGTTCCTCCTTACGATTTAAGCTCCACAAATTTATCTGTAAACGGAGACATGCATTGGTTGCTTCAACGGATCGACAATTACTTAACTAAAAGAGAGAGCCGTATAACTTCTTTCGACTTCAAGAAAGAGGAGTTCTATTGCACTCCCCATCCTATTCAAACAAGGTGGAATATGCATCTATTTATTCTGAGAGGCTGTATGGCGTTTATGGCCGTCACAGGTACGCATGTTGAGATATGGGCGCTAAAAAATTATGAAAAAAAAGAGTGGACGCTTGAATACGCCATAGATCTTCGGGTTCATGGTCATACGCTCAGGGATTATTCGTGGATTGCTGGTTGTGGTCAGTGGGAGCATGGCATTTTTTTCTTGGATTCTGACGACAGTGCATTGTTTTTCGACGTAAGATGTCATTCCATAAAACATGCGACATATCCAATGTTATTTCCGAGAGACCCGGTGGTGGCCAGTAACGCTAGTGTTCACAGTTGTACTCTGAGCTTGATTGCCCTCGAACACTATGGCAATGTGATTGACCAAGAACACATCGTGTCCGCTATTTATTCGGAATCTGGCGAGGTTAAATGGACCTTCAAGAAAAATGTTATCCAACCTGAAGAACATTACTGGAAAGGTAAAACTTTCAAACGGATTGTGGAAACACTCTTGAAGCAGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

445

Amino Acids

51.29

Weight (kDa)

8.49

Isoelectric Point (pI)

53.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 26 - 65 7.2e-09 F-box domain
FBA_1 PF07734 128 - 352 3e-14 F-box associated beta propeller domain
FBA_3 PF08268 137 - 312 5.5e-18 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 498
AccII CGCG 1 cut(s) 211
AciI CCGC 4 cut(s) 211, 290, 640, 1209
AclWI GGATC 2 cut(s) 449, 731
AcoI YGGCCR 2 cut(s) 864, 1119
AcsI RAATTY 1 cut(s) 682
AcuI CTGAAG 2 cut(s) 261, 1290
AcyI GRCGYC 2 cut(s) 58, 495
AdeI CACNNNGTG 1 cut(s) 1204
AfaI GTAC 5 cut(s) 246, 297, 530, 877, 1147
AfiI CCNNNNNNNGG 2 cut(s) 464, 1117
AhdI GACNNNNNGTC 1 cut(s) 187
AluBI AGCT 4 cut(s) 43, 633, 675, 1155
AluI AGCT 4 cut(s) 43, 633, 675, 1155
Alw26I GTCTC 5 cut(s) 46, 112, 358, 693, 1101
AlwI GGATC 2 cut(s) 449, 731
AoxI GGCC 3 cut(s) 606, 864, 1119
ApoI RAATTY 1 cut(s) 682
ArsI GACNNNNNNTTYG 4 cut(s) 74, 106, 176, 208
AspLEI GCGC 1 cut(s) 898
AspS9I GGNCC 2 cut(s) 607, 1242
AsuC2I CCSGG 1 cut(s) 1112
AsuII TTCGAA 1 cut(s) 306
AvaII GGWCC 1 cut(s) 1242
BaeGI GKGCMC 1 cut(s) 629
BaeI ACNNNNGTAYC 2 cut(s) 867, 900
BalI TGGCCA 1 cut(s) 1121
BauI CACGAG 1 cut(s) 634
BccI CCATC 2 cut(s) 308, 810
BceAI ACGGC 2 cut(s) 738, 851
BcnI CCSGG 1 cut(s) 1112
BcoDI GTCTC 5 cut(s) 46, 112, 358, 693, 1101
BfaI CTAG 1 cut(s) 1131
BfmI CTRYAG 1 cut(s) 582
BfoI RGCGCY 1 cut(s) 899
BglII AGATCT 1 cut(s) 943
BisI GCNGC 1 cut(s) 291
BlsI GCNGC 1 cut(s) 292
Bme1390I CCNGG 1 cut(s) 1112
Bme18I GGWCC 1 cut(s) 1242
BmeRI GACNNNNNGTC 1 cut(s) 187
BmgT120I GGNCC 2 cut(s) 607, 1242
BmrFI CCNGG 1 cut(s) 1112
BmrI ACTGGG 1 cut(s) 494
BmsI GCATC 2 cut(s) 453, 838
BmuI ACTGGG 1 cut(s) 494
BoxI GACNNNNGTC 1 cut(s) 154
Bpu10I CCTNAGC 1 cut(s) 968
Bpu14I TTCGAA 1 cut(s) 306
BpuMI CCSGG 1 cut(s) 1112
BsaHI GRCGYC 2 cut(s) 58, 495
BsaI GGTCTC 1 cut(s) 1101
Bsc4I CCNNNNNNNGG 2 cut(s) 464, 1117
Bse1I ACTGG 4 cut(s) 187, 500, 1122, 1286
Bse3DI GCAATG 1 cut(s) 1186
BseGI GGATG 2 cut(s) 108, 802
BseLI CCNNNNNNNGG 2 cut(s) 464, 1117
BseMI GCAATG 1 cut(s) 1186
BseMII CTCAG 6 cut(s) 41, 369, 666, 833, 982, 1142
BseNI ACTGG 4 cut(s) 187, 500, 1122, 1286
BseRI GAGGAG 2 cut(s) 313, 797
BseSI GKGCMC 1 cut(s) 629
Bsh1236I CGCG 1 cut(s) 211
BshFI GGCC 3 cut(s) 608, 866, 1121
BsiSI CCGG 2 cut(s) 61, 1112
BslFI GGGAC 2 cut(s) 480, 482
BslI CCNNNNNNNGG 2 cut(s) 464, 1117
BsmAI GTCTC 5 cut(s) 46, 112, 358, 693, 1101
BsmBI CGTCTC 1 cut(s) 46
BsmFI GGGAC 2 cut(s) 480, 482
BsnI GGCC 3 cut(s) 608, 866, 1121
Bso31I GGTCTC 1 cut(s) 1101
Bsp119I TTCGAA 1 cut(s) 306
Bsp1286I GDGCHC 1 cut(s) 629
Bsp1407I TGTACA 1 cut(s) 528
Bsp143I GATC 3 cut(s) 454, 723, 943
BspACI CCGC 4 cut(s) 211, 290, 640, 1209
BspANI GGCC 3 cut(s) 608, 866, 1121
BspCNI CTCAG 6 cut(s) 42, 368, 665, 834, 981, 1143
BspFNI CGCG 1 cut(s) 211
BspHI TCATGA 1 cut(s) 12
BspMAI CTGCAG 1 cut(s) 586
BspPI GGATC 2 cut(s) 449, 731
BspT104I TTCGAA 1 cut(s) 306
BspTNI GGTCTC 1 cut(s) 1101
BsrDI GCAATG 1 cut(s) 1186
BsrGI TGTACA 1 cut(s) 528
BsrI ACTGG 4 cut(s) 187, 500, 1122, 1286
BssMI GATC 3 cut(s) 454, 723, 943
BssNI GRCGYC 2 cut(s) 58, 495
BssSI CACGAG 1 cut(s) 634
Bst2BI CACGAG 1 cut(s) 634
Bst4CI ACNGT 5 cut(s) 374, 430, 533, 1040, 1142
BstACI GRCGYC 2 cut(s) 58, 495
BstAPI GCANNNNNTGC 1 cut(s) 712
BstAUI TGTACA 1 cut(s) 528
BstBI TTCGAA 1 cut(s) 306
BstDEI CTNAG 7 cut(s) 44, 50, 355, 652, 842, 968, 1151
BstF5I GGATG 2 cut(s) 108, 802
BstFNI CGCG 1 cut(s) 211
BstH2I RGCGCY 1 cut(s) 899
BstHHI GCGC 1 cut(s) 898
BstKTI GATC 3 cut(s) 457, 726, 946
BstMAI GTCTC 5 cut(s) 46, 112, 358, 693, 1101
BstMBI GATC 3 cut(s) 454, 723, 943
BstMWI GCNNNNNNNGC 5 cut(s) 230, 287, 712, 863, 1127
BstNSI RCATGY 4 cut(s) 347, 706, 884, 1082
BstPAI GACNNNNGTC 1 cut(s) 154
BstSCI CCNGG 1 cut(s) 1110
BstSFI CTRYAG 1 cut(s) 582
BstSLI GKGCMC 1 cut(s) 629
BstUI CGCG 1 cut(s) 211
BstX2I RGATCY 1 cut(s) 943
BstYI RGATCY 1 cut(s) 943
BsuRI GGCC 3 cut(s) 608, 866, 1121
BtsCI GGATG 2 cut(s) 108, 802
BtsIMutI CAGTG 2 cut(s) 1007, 1045
CciI TCATGA 1 cut(s) 12
CfoI GCGC 1 cut(s) 898
Cfr13I GGNCC 2 cut(s) 607, 1242
CseI GACGC 2 cut(s) 66, 934
Csp6I GTAC 5 cut(s) 245, 296, 529, 876, 1146
CspCI CAANNNNNGTGG 2 cut(s) 800, 835
CviAII CATG 8 cut(s) 13, 277, 344, 703, 881, 956, 1010, 1079
CviQI GTAC 5 cut(s) 245, 296, 529, 876, 1146
DdeI CTNAG 7 cut(s) 44, 50, 355, 652, 842, 968, 1151
DpnI GATC 3 cut(s) 456, 725, 945
DpnII GATC 3 cut(s) 454, 723, 943
DraIII CACNNNGTG 1 cut(s) 1204
DriI GACNNNNNGTC 1 cut(s) 187
EaeI YGGCCR 2 cut(s) 864, 1119
Eam1105I GACNNNNNGTC 1 cut(s) 187
EciI GGCGGA 1 cut(s) 655
Eco31I GGTCTC 1 cut(s) 1101
Eco47I GGWCC 1 cut(s) 1242
Eco57I CTGAAG 2 cut(s) 261, 1290
EcoT22I ATGCAT 2 cut(s) 708, 831
Esp3I CGTCTC 1 cut(s) 46
FaeI CATG 8 cut(s) 16, 280, 347, 706, 884, 959, 1013, 1082
FalI AAGNNNNNCTT 2 cut(s) 56, 88
FaqI GGGAC 2 cut(s) 480, 482
FatI CATG 8 cut(s) 12, 276, 343, 702, 880, 955, 1009, 1078
Fnu4HI GCNGC 1 cut(s) 291
FokI GGATG 2 cut(s) 95, 789
Fsp4HI GCNGC 1 cut(s) 291
FspBI CTAG 1 cut(s) 1131
GlaI GCGC 1 cut(s) 897
GluI GCNGC 1 cut(s) 291
HaeII RGCGCY 1 cut(s) 899
HaeIII GGCC 3 cut(s) 608, 866, 1121
HapII CCGG 2 cut(s) 61, 1112
HgaI GACGC 2 cut(s) 66, 934
HhaI GCGC 1 cut(s) 898
Hin1I GRCGYC 2 cut(s) 58, 495
Hin1II CATG 8 cut(s) 16, 280, 347, 706, 884, 959, 1013, 1082
Hin6I GCGC 1 cut(s) 896
HinP1I GCGC 1 cut(s) 896
HincII GTYRAC 3 cut(s) 78, 106, 181
HindII GTYRAC 3 cut(s) 78, 106, 181
HindIII AAGCTT 1 cut(s) 41
HinfI GANTC 3 cut(s) 366, 1028, 1223
HpaI GTTAAC 1 cut(s) 78
HpaII CCGG 2 cut(s) 61, 1112
Hpy166II GTNNAC 7 cut(s) 78, 106, 181, 529, 694, 924, 1138
Hpy188I TCNGA 6 cut(s) 358, 843, 1033, 1104, 1152, 1222
Hpy188III TCNNGA 6 cut(s) 13, 117, 484, 775, 1249, 1321
Hpy8I GTNNAC 7 cut(s) 78, 106, 181, 529, 694, 924, 1138
Hpy99I CGWCG 3 cut(s) 60, 153, 1058
HpyAV CCTTC 1 cut(s) 1255
HpyCH4III ACNGT 5 cut(s) 374, 430, 533, 1040, 1142
HpyCH4IV ACGT 3 cut(s) 151, 495, 1056
HpyCH4V TGCA 9 cut(s) 347, 411, 444, 584, 592, 706, 795, 829, 1043
HpyF10VI GCNNNNNNNGC 5 cut(s) 230, 287, 712, 863, 1127
HpyF3I CTNAG 7 cut(s) 44, 50, 355, 652, 842, 968, 1151
HpySE526I ACGT 3 cut(s) 151, 495, 1056
Hsp92I GRCGYC 2 cut(s) 58, 495
Hsp92II CATG 8 cut(s) 16, 280, 347, 706, 884, 959, 1013, 1082
HspAI GCGC 1 cut(s) 896
KspAI GTTAAC 1 cut(s) 78
Kzo9I GATC 3 cut(s) 454, 723, 943
LmnI GCTCC 3 cut(s) 388, 680, 1006
LweI GCATC 2 cut(s) 453, 838
MaeI CTAG 1 cut(s) 1131
MaeII ACGT 3 cut(s) 151, 495, 1056
MaeIII GTNAC 6 cut(s) 132, 196, 213, 491, 868, 1124
MalI GATC 3 cut(s) 456, 725, 945
MboI GATC 3 cut(s) 454, 723, 943
MboII GAAGA 5 cut(s) 49, 181, 655, 938, 1283
MfeI CAATTG 1 cut(s) 348
MflI RGATCY 1 cut(s) 943
MhlI GDGCHC 1 cut(s) 629
MlsI TGGCCA 1 cut(s) 1121
MluCI AATT 7 cut(s) 299, 348, 398, 567, 682, 730, 904
MluNI TGGCCA 1 cut(s) 1121
MmeI TCCRAC 1 cut(s) 1288
MnlI CCTC 8 cut(s) 110, 258, 334, 669, 775, 839, 1175, 1225
Mox20I TGGCCA 1 cut(s) 1121
Mph1103I ATGCAT 2 cut(s) 708, 831
MscI TGGCCA 1 cut(s) 1121
MseI TTAA 6 cut(s) 77, 462, 551, 671, 737, 1236
MslI CAYNNNNRTG 1 cut(s) 275
Msp20I TGGCCA 1 cut(s) 1121
MspI CCGG 2 cut(s) 61, 1112
MspR9I CCNGG 1 cut(s) 1112
MunI CAATTG 1 cut(s) 348
MvnI CGCG 1 cut(s) 211
MwoI GCNNNNNNNGC 5 cut(s) 230, 287, 712, 863, 1127
NciI CCSGG 1 cut(s) 1112
NdeII GATC 3 cut(s) 454, 723, 943
NlaIII CATG 8 cut(s) 16, 280, 347, 706, 884, 959, 1013, 1082
NmuCI GTSAC 3 cut(s) 132, 491, 868
NsiI ATGCAT 2 cut(s) 708, 831
NspI RCATGY 4 cut(s) 347, 706, 884, 1082
NspV TTCGAA 1 cut(s) 306
PagI TCATGA 1 cut(s) 12
PcsI WCGNNNNNNNCGW 1 cut(s) 387
PfeI GAWTC 3 cut(s) 366, 1028, 1223
PkrI GCNGC 1 cut(s) 292
PshAI GACNNNNGTC 1 cut(s) 154
PspPI GGNCC 2 cut(s) 607, 1242
PstI CTGCAG 1 cut(s) 586
PsuI RGATCY 1 cut(s) 943
RsaI GTAC 5 cut(s) 246, 297, 530, 877, 1147
RsaNI GTAC 5 cut(s) 245, 296, 529, 876, 1146
RseI CAYNNNNRTG 1 cut(s) 275
SaqAI TTAA 6 cut(s) 77, 462, 551, 671, 737, 1236
SatI GCNGC 1 cut(s) 291
Sau3AI GATC 3 cut(s) 454, 723, 943
Sau96I GGNCC 2 cut(s) 607, 1242
ScrFI CCNGG 1 cut(s) 1112
SduI GDGCHC 1 cut(s) 629
SfaNI GCATC 2 cut(s) 453, 838
SfcI CTRYAG 1 cut(s) 582
SfuI TTCGAA 1 cut(s) 306
SinI GGWCC 1 cut(s) 1242
SmiMI CAYNNNNRTG 1 cut(s) 275
Sse9I AATT 7 cut(s) 299, 348, 398, 567, 682, 730, 904
SsiI CCGC 4 cut(s) 211, 290, 640, 1209
SspI AATATT 1 cut(s) 25
SspMI CTAG 1 cut(s) 1131
StyD4I CCNGG 1 cut(s) 1110
TaaI ACNGT 5 cut(s) 374, 430, 533, 1040, 1142
TaiI ACGT 3 cut(s) 154, 498, 1059
TaqI TCGA 8 cut(s) 116, 148, 306, 369, 726, 768, 1053, 1167
TasI AATT 7 cut(s) 299, 348, 398, 567, 682, 730, 904
TatI WGTACW 3 cut(s) 295, 528, 1145
TauI GCSGC 1 cut(s) 293
TfiI GAWTC 3 cut(s) 366, 1028, 1223
Tru1I TTAA 6 cut(s) 77, 462, 551, 671, 737, 1236
Tru9I TTAA 6 cut(s) 77, 462, 551, 671, 737, 1236
TscAI CASTG 2 cut(s) 1007, 1045
TseFI GTSAC 3 cut(s) 132, 491, 868
Tsp45I GTSAC 3 cut(s) 132, 491, 868
TspDTI ATGAA 2 cut(s) 924, 944
TspGWI ACGGA 3 cut(s) 711, 736, 1318
TspRI CASTG 2 cut(s) 1007, 1045
VpaK11BI GGWCC 1 cut(s) 1242
XapI RAATTY 1 cut(s) 682
XceI RCATGY 4 cut(s) 347, 706, 884, 1082
XspI CTAG 1 cut(s) 1131
ZraI GACGTC 1 cut(s) 496
Zsp2I ATGCAT 2 cut(s) 708, 831
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.