AT1G02530

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
529679 .. 534677
4999 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G02530.1

Sequence Viewer

Length: 3822 bp
ATGAACCGTGACGGCGCCGGAGAAGGCGACTCTGTTTCACACGAACATTCAACATCTAAAACCGATGAAAAGGCCAAGACAGTTCCTCTCTACAAGCTATTTGCGTTTGCAGATTCCTTCGATGTGTTTTTGATGATATGTGGCTCACTTGGAGCTATTGGGAATGGAGTGTGTTTACCTCTTATGACATTGTTGTTTGGTGATCTCATCGATTCCTTTGGAAAAAATCAGAACAACAAAGACATTGTTGATGTTGTCTCAAAGGTTTGTCTTAAATTCGTCTACCTTGGACTTGGAAGACTTGGAGCAGCCTTTCTTCAGGTTGCTTGTTGGATGATTACTGGAGAGAGACAAGCCGCAAAGATAAGAAGTAACTATCTGAAAACAATTCTGAGACAAGACATCGGATTCTTCGATGTTGAAACAAACACAGGAGAGGTTGTTGGTAGAATGTCTGGAGATACTGTTCATATTCAAGATGCCATGGGTGAGAAGGTGGGGAAGTTTATTCAGCTGGTATCTACTTTCGTTGGCGGATTTGCTTTAGCTTTTGCTAAAGGATGGTTGCTAACATTGGTTATGTTAACTTCGATTCCTTTTCTGGCTATGGCTGGTGCAGCCATGGCGCTTTTAGTGACTCGAGCTTCTTCTCGGGGACAAGCCGCTTATGCAAAAGCAGCAACTGTTGTTGAACAGACAATCGGGTCTATCCGAACGGTTGCTTCTTTTACGGGAGAGAAGCAAGCAATAAACAGCTACAAGAAGTACATAACATCGGCTTATAAATCAAGCATTCAACAAGGTTTCTCCACTGGTTTAGGACTTGGAGTAATGATCTATGTGTTCTTCAGCAGCTATGCTTTGGCTATTTGGTTTGGTGGGAAGATGATACTCGAAAAAGGGTATACCGGTGGCTCTGTGATCAACGTGATCATCATTGTGGTTGCGGGTTCAATGTCGCTTGGGCAAACATCTCCATGTGTAACCGCATTTGCAGCAGGTCAAGCTGCAGCATATAAGATGTTTGAGACGATCAAAAGAAAGCCTTTGATTGATGCTTATGACGTAAATGGAAAGGTTCTTGGAGATATCCGAGGAGACATTGAACTGAAAGATGTGCATTTCAGTTACCCCGCGAGGCCAGACGAGGAGATATTTGATGGATTCTCTCTGTTTATCCCGAGCGGTGCAACAGCAGCACTGGTAGGAGAAAGTGGAAGTGGAAAATCTACGGTGATAAATTTGATTGAGAGGTTTTATGATCCGAAAGCCGGTGAAGTACTCATTGATGGAATTAATCTTAAGGAGTTTCAGTTGAAATGGATCAGAAGCAAAATCGGATTGGTCTGCCAAGAACCTGTTCTGTTTTCGTCGAGCATCATGGAGAATATCGCCTACGGGAAAGAAAATGCAACGCTTCAAGAGATTAAAGTAGCAACAGAGCTAGCAAATGCAGCAAAGTTCATAAATAACTTACCTCAGGGGTTAGATACAAAGGTAGGAGAGCACGGGACACAGCTCTCGGGAGGACAGAAACAGAGGATAGCTATTGCAAGAGCTATTCTTAAAGATCCGCGGGTTTTGCTTCTGGATGAAGCAACAAGCGCGCTCGATACAGAATCCGAAAGAGTGGTTCAAGAGGCTTTAGATAGAGTCATGGTTAACCGGACTACGGTGGTGGTTGCGCATAGATTAAGCACGGTAAGAAATGCGGATATGATTGCAGTAATTCACAGCGGAAAAATGGTGGAAAAAGGTTCGCATTCTGAGTTGTTGAAAGATTCCGTGGGAGCTTATTCGCAGCTCATTCGGTGTCAAGAGATAAACAAGGGTCATGATGCAAAACCATCAGACATGGCTTCGGGATCATCTTTCCGGAATTCGAATTTGAACATATCAAGAGAGGGATCGGTTATCAGTGGTGGAACCTCGTCTTTTGGAAATAGCAGTCGTCATCATTCTTTGAATGTCCTTGGTTTATTCGCTGGACTAGACCTTGGTAGCGGTAGCCAAAGAGTAGGCCAAGAGGAAACTGGAACGACGAGTCAAGAACCGCTCCGAAAAGTATCACTCACCCGAATCGCAGCTCTAAACAAACCTGAGATCCCGGTTCTCCTTCTTGGAACTGTAGTAGCAGCAATCAATGGCGCGATTTTCCCGCTTTTCGGGATTCTGATTTCAAGAGTCATCGAAGCGTTCTTCAAACCAGCTGACCAATTAAAGAAAGATTCAAGATTCTGGGCGATTATATTTGTAGCTCTGGGAGTAACTTCGTTGATTGTCTCACCGTCTCAAATGTATCTGTTTGCAGTAGCTGGAGGAAAACTTATACGACGAATTCAGTCAATGTGCTTTGAGAAAGCGGTTCACATGGAGGTTAGCTGGTTCGATGAGCCAGAGAACTCGAGTGGTACAATGGGGGCAAGGCTCTCGACTGATGCAGCTTTGATTAGAGCTCTAGTAGGAGATGCATTGTCTTTAGCGGTTCAAAACGCTGCATCTGCTGCGTCTGGATTGATTATAGCGTTCACTGCGAGTTGGGAATTGGCGCTTATAATCTTAGTGATGCTTCCTCTTATTGGTATCAATGGCTTTCTTCAAGTCAAGTTTATGAAAGGATTCAGCGCCGACGCAAAGTCAAAGTATGAGGAGGCAAGTCAGGTAGCGAACGACGCGGTGGGGAGTATAAGAACAGTTGCATCTTTCTGCGCGGAGGAGAAAGTGATGCAGATGTATAATAAGCAATGTGAAGGTCCGATAAAAGATGGAGTAAAGCAAGGTTTCATCAGCGGATTAGGGTTTGGATTCTCCTTCTTCATTCTGTTTTGTGTCTACGCGACAAGCTTCTACGCGGCAGCTAGATTGGTTGAAGATGGCAAAACTACTTTCATTGATGTTTTCCAGGTGTTTTTCGCGTTAACCATGGCAGCTATTGGAATTTCTCAGTCGAGTACTTTCGCTCCAGATTCAAGCAAAGCCAAGGTCGCAGCTGCTTCAATCTTCGCGATCATCGATAGAAAATCAAAGATAGACTCGAGCGATGAGACAGGGACAGTGTTGGAGAACGTTAAGGGAGATATTGAGCTTCGTCACTTAAGCTTCACTTATCCAGCAAGACCAGGCATTCAGATCTTTCGTGATCTTTGCTTAACCATTCGCGCAGGAAAGACGGTTGCTTTGGTCGGCGAAAGTGGGTCGGGGAAATCGACGGTGATCTCGCTGTTACAAAGATTTTACGATCCAGATTCCGGTCAGATAACTTTAGACGGAGTTGAGCTCAAGAAGCTGCAATTGAAATGGTTGAGACAACAAATGGGACTAGTGGGACAAGAACCTGTCTTGTTCAACGACACGATTCGAGCCAACATTGCTTATGGCAAAGGAAGTGAAGAGGCCGCAACCGAGTCTGAAATCATAGCCGCTGCAGAACTTGCCAATGCACACAAATTCATCTCTAGCATACAACAGGGTTACGACACAGTGGTGGGAGAGAAAGGGATTCAGTTATCAGGAGGACAGAAACAGCGGGTAGCTATAGCACGTGCCATCGTGAAAGAGCCGAAGATATTGCTTTTGGACGAAGCAACGAGTGCTCTTGATGCAGAATCAGAGCGACTGGTTCAGGATGCGCTTGACCGAGTGATTGTAAACCGAACCACGGTTGTGGTGGCTCACCGGTTATCGACCATTAAAAACGCTGACGTCATTGCCATCGTTAAGAACGGTGTGATCGCTGAGAATGGGACTCACGAAACGTTGATCAAAATAGACGGTGGGGTTTATGCTTCCCTTGTTCAGCTTCACATGACTGCTTCTAATTGA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

1273

Amino Acids

136.77

Weight (kDa)

7.82

Isoelectric Point (pI)

31.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 46 - 318 1.2e-56 ABC transporter transmembrane region
ABC_tran PF00005 387 - 535 1.1e-32 ABC transporter
ABC_membrane PF00664 705 - 977 1.4e-58 ABC transporter transmembrane region
ABC_tran PF00005 1046 - 1197 5.9e-35 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 783, 2555
AasI GACNNNNNNGTC 1 cut(s) 703
AatII GACGTC 1 cut(s) 3705
Acc16I TGCGCA 1 cut(s) 1686
Acc36I ACCTGC 1 cut(s) 989
AccB1I GGYRCC 1 cut(s) 14
AccBSI CCGCTC 2 cut(s) 1185, 2056
AccI GTMKAC 3 cut(s) 282, 905, 2832
AccIII TCCGGA 1 cut(s) 1875
AclI AACGTT 2 cut(s) 3066, 3755
AclWI GGATC 7 cut(s) 1256, 1331, 1565, 1873, 1915, 2098, 3233
AcsI RAATTY 7 cut(s) 275, 1240, 1879, 1885, 2337, 2937, 3446
AcuI CTGAAG 2 cut(s) 302, 832
AcvI CACGTG 1 cut(s) 3542
AcyI GRCGYC 2 cut(s) 15, 3702
AfaI GTAC 4 cut(s) 767, 1281, 2413, 2953
AfiI CCNNNNNNNGG 6 cut(s) 1271, 1672, 2165, 2579, 3248, 3658
AflII CTTAAG 2 cut(s) 1301, 3094
AgeI ACCGGT 2 cut(s) 908, 3675
AhdI GACNNNNNGTC 1 cut(s) 2635
AhlI ACTAGT 1 cut(s) 3319
AjnI CCWGG 2 cut(s) 2901, 3118
AjuI GAANNNNNNNTTGG 2 cut(s) 1344, 1376
AleI CACNNNNGTG 2 cut(s) 3482, 3662
AloI GAACNNNNNNTCC 2 cut(s) 450, 482
Alw21I GWGCWC 4 cut(s) 1509, 2458, 3279, 3595
Alw26I GTCTC 9 cut(s) 262, 343, 388, 1022, 1092, 2287, 2295, 3038, 3298
AlwI GGATC 7 cut(s) 1256, 1331, 1565, 1873, 1915, 2098, 3233
AlwNI CAGNNNCTG 2 cut(s) 683, 2315
Ama87I CYCGRG 6 cut(s) 639, 651, 1180, 1522, 2404, 3034
Aor13HI TCCGGA 1 cut(s) 1875
AoxI GGCC 4 cut(s) 72, 1139, 2020, 3393
ApoI RAATTY 7 cut(s) 275, 1240, 1879, 1885, 2337, 2937, 3446
ArsI GACNNNNNNTTYG 4 cut(s) 2967, 2999, 3160, 3192
AseI ATTAAT 1 cut(s) 1296
AsiGI ACCGGT 2 cut(s) 908, 3675
Asp700I GAANNNNTTC 2 cut(s) 1359, 2618
AspS9I GGNCC 1 cut(s) 2753
AsuC2I CCSGG 1 cut(s) 2108
AsuHPI GGTGA 8 cut(s) 212, 500, 1246, 1286, 2065, 2277, 3223, 3665
AsuII TTCGAA 1 cut(s) 1883
AsuNHI GCTAGC 1 cut(s) 1444
AvaI CYCGRG 6 cut(s) 639, 651, 1180, 1522, 2404, 3034
AvaII GGWCC 1 cut(s) 2753
AxyI CCTNAGG 1 cut(s) 1479
BaeI ACNNNNGTAYC 2 cut(s) 1482, 1515
BanI GGYRCC 1 cut(s) 14
BanII GRGCYC 2 cut(s) 2458, 3279
BbrPI CACGTG 1 cut(s) 3542
BbsI GAAGAC 1 cut(s) 304
Bbv12I GWGCWC 4 cut(s) 1509, 2458, 3279, 3595
BccI CCATC 8 cut(s) 555, 1154, 1283, 1855, 2759, 2867, 3554, 3719
BceAI ACGGC 1 cut(s) 28
BcgI CGANNNNNNTGC 6 cut(s) 1790, 1824, 2412, 2446, 3550, 3584
BciT130I CCWGG 2 cut(s) 2903, 3120
BclI TGATCA 3 cut(s) 921, 930, 3759
BcnI CCSGG 1 cut(s) 2108
BcoDI GTCTC 9 cut(s) 262, 343, 388, 1022, 1092, 2287, 2295, 3038, 3298
BcuI ACTAGT 1 cut(s) 3319
BfaI CTAG 6 cut(s) 1445, 1991, 2459, 2859, 3320, 3456
BfmI CTRYAG 4 cut(s) 1008, 2127, 3423, 3534
BfoI RGCGCY 4 cut(s) 18, 629, 2552, 2628
BfrI CTTAAG 2 cut(s) 1301, 3094
BfuAI ACCTGC 1 cut(s) 989
BglII AGATCT 1 cut(s) 3129
BmcAI AGTACT 2 cut(s) 1281, 2953
Bme1390I CCNGG 3 cut(s) 2108, 2903, 3120
Bme18I GGWCC 1 cut(s) 2753
BmeRI GACNNNNNGTC 1 cut(s) 2635
BmeT110I CYCGRG 6 cut(s) 639, 651, 1180, 1522, 2404, 3034
BmgT120I GGNCC 1 cut(s) 2753
BmiI GGNNCC 2 cut(s) 16, 1927
BmrFI CCNGG 3 cut(s) 2108, 2903, 3120
BmtI GCTAGC 1 cut(s) 1448
BpiI GAAGAC 1 cut(s) 304
BplI GAGNNNNNCTC 2 cut(s) 3261, 3293
BpmI CTGGAG 4 cut(s) 363, 477, 2337, 2946
Bpu14I TTCGAA 1 cut(s) 1883
BpuEI CTTGAG 1 cut(s) 3263
BpuMI CCSGG 1 cut(s) 2108
Bsa29I ATCGAT 2 cut(s) 210, 3012
BsaAI YACGTR 1 cut(s) 3542
BsaHI GRCGYC 2 cut(s) 15, 3702
BsaWI WCCGGW 5 cut(s) 908, 1665, 1875, 3248, 3675
BsaXI ACNNNNNCTCC 8 cut(s) 426, 450, 456, 480, 1298, 1328, 2944, 2974
Bsc4I CCNNNNNNNGG 6 cut(s) 1271, 1672, 2165, 2579, 3248, 3658
Bse118I RCCGGY 3 cut(s) 908, 1271, 3675
Bse1I ACTGG 5 cut(s) 346, 817, 1206, 2038, 3621
Bse21I CCTNAGG 1 cut(s) 1479
Bse3DI GCAATG 3 cut(s) 2750, 3366, 3705
BseAI TCCGGA 1 cut(s) 1875
BseBI CCWGG 2 cut(s) 2903, 3120
BseCI ATCGAT 2 cut(s) 210, 3012
BseGI GGATG 4 cut(s) 339, 566, 1597, 3631
BseLI CCNNNNNNNGG 6 cut(s) 1271, 1672, 2165, 2579, 3248, 3658
BseMI GCAATG 3 cut(s) 2750, 3366, 3705
BseMII CTCAG 6 cut(s) 383, 1493, 1758, 2091, 2957, 3726
BseNI ACTGG 5 cut(s) 346, 817, 1206, 2038, 3621
BsePI GCGCGC 1 cut(s) 1605
BseRI GAGGAG 4 cut(s) 1110, 1163, 2663, 2729
BsgI GTGCAG 1 cut(s) 636
BshFI GGCC 4 cut(s) 74, 1141, 2022, 3395
BshNI GGYRCC 1 cut(s) 14
BshTI ACCGGT 2 cut(s) 908, 3675
BshVI ATCGAT 2 cut(s) 210, 3012
BsiHKAI GWGCWC 4 cut(s) 1509, 2458, 3279, 3595
BsiHKCI CYCGRG 6 cut(s) 639, 651, 1180, 1522, 2404, 3034
BsiSI CCGG 8 cut(s) 18, 909, 1272, 1666, 1876, 2108, 3249, 3676
BslFI GGGAC 6 cut(s) 669, 1525, 3064, 3330, 3339, 3757
BslI CCNNNNNNNGG 6 cut(s) 1271, 1672, 2165, 2579, 3248, 3658
BsmAI GTCTC 9 cut(s) 262, 343, 388, 1022, 1092, 2287, 2295, 3038, 3298
BsmBI CGTCTC 2 cut(s) 1022, 2295
BsmFI GGGAC 6 cut(s) 669, 1525, 3064, 3330, 3339, 3757
BsmI GAATGC 3 cut(s) 792, 1762, 3123
BsnI GGCC 4 cut(s) 74, 1141, 2022, 3395
BsoBI CYCGRG 6 cut(s) 639, 651, 1180, 1522, 2404, 3034
Bsp119I TTCGAA 1 cut(s) 1883
Bsp1286I GDGCHC 4 cut(s) 1509, 2458, 3279, 3595
Bsp13I TCCGGA 1 cut(s) 1875
Bsp19I CCATGG 3 cut(s) 483, 621, 2922
Bsp68I TCGCGA 1 cut(s) 3005
BspANI GGCC 4 cut(s) 74, 1141, 2022, 3395
BspCNI CTCAG 6 cut(s) 384, 1492, 1759, 2092, 2956, 3727
BspDI ATCGAT 2 cut(s) 210, 3012
BspEI TCCGGA 1 cut(s) 1875
BspHI TCATGA 1 cut(s) 1834
BspLI GGNNCC 2 cut(s) 16, 1927
BspMAI CTGCAG 2 cut(s) 1012, 3427
BspMI ACCTGC 1 cut(s) 989
BspOI GCTAGC 1 cut(s) 1448
BspPI GGATC 7 cut(s) 1256, 1331, 1565, 1873, 1915, 2098, 3233
BspT104I TTCGAA 1 cut(s) 1883
BspT107I GGYRCC 1 cut(s) 14
BspTI CTTAAG 2 cut(s) 1301, 3094
BsrBI CCGCTC 2 cut(s) 1185, 2056
BsrDI GCAATG 3 cut(s) 2750, 3366, 3705
BsrFI RCCGGY 3 cut(s) 908, 1271, 3675
BsrI ACTGG 5 cut(s) 346, 817, 1206, 2038, 3621
BssAI RCCGGY 3 cut(s) 908, 1271, 3675
BssHII GCGCGC 1 cut(s) 1605
BssNAI GTATAC 1 cut(s) 906
BssNI GRCGYC 2 cut(s) 15, 3702
BssT1I CCWWGG 7 cut(s) 286, 483, 621, 1972, 1996, 2922, 2979
Bst1107I GTATAC 1 cut(s) 906
Bst2UI CCWGG 2 cut(s) 2903, 3120
Bst6I CTCTTC 1 cut(s) 3384
BstACI GRCGYC 2 cut(s) 15, 3702
BstAFI CTTAAG 2 cut(s) 1301, 3094
BstAPI GCANNNNNTGC 3 cut(s) 2504, 3431, 3590
BstBAI YACGTR 1 cut(s) 3542
BstBI TTCGAA 1 cut(s) 1883
BstC8I GCNNGC 3 cut(s) 744, 1446, 1607
BstDEI CTNAG 7 cut(s) 392, 1479, 1767, 2100, 2560, 2943, 3735
BstDSI CCRYGG 6 cut(s) 483, 621, 1574, 1785, 2922, 3657
BstF5I GGATG 4 cut(s) 339, 566, 1597, 3631
BstH2I RGCGCY 4 cut(s) 18, 629, 2552, 2628
BstMAI GTCTC 9 cut(s) 262, 343, 388, 1022, 1092, 2287, 2295, 3038, 3298
BstNI CCWGG 2 cut(s) 2903, 3120
BstSCI CCNGG 3 cut(s) 2106, 2901, 3118
BstSFI CTRYAG 4 cut(s) 1008, 2127, 3423, 3534
BstV2I GAAGAC 1 cut(s) 304
BstX2I RGATCY 3 cut(s) 1570, 2103, 3129
BstXI CCANNNNNNTGG 1 cut(s) 3664
BstYI RGATCY 3 cut(s) 1570, 2103, 3129
BstZ17I GTATAC 1 cut(s) 906
Bsu15I ATCGAT 2 cut(s) 210, 3012
Bsu36I CCTNAGG 1 cut(s) 1479
BsuRI GGCC 4 cut(s) 74, 1141, 2022, 3395
BsuTUI ATCGAT 2 cut(s) 210, 3012
BtgI CCRYGG 6 cut(s) 483, 621, 1574, 1785, 2922, 3657
BtgZI GCGATG 1 cut(s) 3054
BtsCI GGATG 4 cut(s) 339, 566, 1597, 3631
BtsI GCAGTG 1 cut(s) 2529
BtsIMutI CAGTG 6 cut(s) 810, 1199, 1924, 2529, 3060, 3486
BtuMI TCGCGA 1 cut(s) 3005
BveI ACCTGC 1 cut(s) 989
Cac8I GCNNGC 3 cut(s) 744, 1446, 1607
CaiI CAGNNNCTG 2 cut(s) 683, 2315
CciI TCATGA 1 cut(s) 1834
Cfr10I RCCGGY 3 cut(s) 908, 1271, 3675
Cfr13I GGNCC 1 cut(s) 2753
Cfr42I CCGCGG 1 cut(s) 1577
ClaI ATCGAT 2 cut(s) 210, 3012
CseI GACGC 3 cut(s) 2496, 2639, 2681
Csp6I GTAC 4 cut(s) 766, 1280, 2412, 2952
CspAI ACCGGT 2 cut(s) 908, 3675
CviQI GTAC 4 cut(s) 766, 1280, 2412, 2952
DdeI CTNAG 7 cut(s) 392, 1479, 1767, 2100, 2560, 2943, 3735
DinI GGCGCC 1 cut(s) 16
DrdI GACNNNNNNGTC 1 cut(s) 703
DriI GACNNNNNGTC 1 cut(s) 2635
DseDI GACNNNNNNGTC 1 cut(s) 703
Eam1104I CTCTTC 1 cut(s) 3384
Eam1105I GACNNNNNGTC 1 cut(s) 2635
EarI CTCTTC 1 cut(s) 3384
EciI GGCGGA 1 cut(s) 549
Ecl136II GAGCTC 2 cut(s) 2456, 3277
Eco130I CCWWGG 7 cut(s) 286, 483, 621, 1972, 1996, 2922, 2979
Eco24I GRGCYC 2 cut(s) 2458, 3279
Eco32I GATATC 1 cut(s) 1090
Eco47I GGWCC 1 cut(s) 2753
Eco53kI GAGCTC 2 cut(s) 2456, 3277
Eco57I CTGAAG 2 cut(s) 302, 832
Eco72I CACGTG 1 cut(s) 3542
Eco81I CCTNAGG 1 cut(s) 1479
Eco88I CYCGRG 6 cut(s) 639, 651, 1180, 1522, 2404, 3034
EcoICRI GAGCTC 2 cut(s) 2456, 3277
EcoRI GAATTC 2 cut(s) 1879, 2337
EcoRII CCWGG 2 cut(s) 2901, 3118
EcoRV GATATC 1 cut(s) 1090
EcoT14I CCWWGG 7 cut(s) 286, 483, 621, 1972, 1996, 2922, 2979
EcoT22I ATGCAT 1 cut(s) 2473
EcoT38I GRGCYC 2 cut(s) 2458, 3279
EgeI GGCGCC 1 cut(s) 16
EheI GGCGCC 1 cut(s) 16
ErhI CCWWGG 7 cut(s) 286, 483, 621, 1972, 1996, 2922, 2979
Esp3I CGTCTC 2 cut(s) 1022, 2295
FalI AAGNNNNNCTT 4 cut(s) 1030, 1062, 3088, 3120
FaqI GGGAC 6 cut(s) 669, 1525, 3064, 3330, 3339, 3757
FauI CCCGC 5 cut(s) 940, 1141, 1569, 2166, 3519
FbaI TGATCA 3 cut(s) 921, 930, 3759
FblI GTMKAC 3 cut(s) 282, 905, 2832
FokI GGATG 4 cut(s) 346, 573, 1604, 3638
FriOI GRGCYC 2 cut(s) 2458, 3279
FspBI CTAG 6 cut(s) 1445, 1991, 2459, 2859, 3320, 3456
FspI TGCGCA 1 cut(s) 1686
GsuI CTGGAG 4 cut(s) 363, 477, 2337, 2946
HaeII RGCGCY 4 cut(s) 18, 629, 2552, 2628
HaeIII GGCC 4 cut(s) 74, 1141, 2022, 3395
HapII CCGG 8 cut(s) 18, 909, 1272, 1666, 1876, 2108, 3249, 3676
HgaI GACGC 3 cut(s) 2496, 2639, 2681
Hin1I GRCGYC 2 cut(s) 15, 3702
HincII GTYRAC 3 cut(s) 585, 1663, 2919
HindII GTYRAC 3 cut(s) 585, 1663, 2919
HindIII AAGCTT 2 cut(s) 2842, 3097
HpaI GTTAAC 3 cut(s) 585, 1663, 2919
HpaII CCGG 8 cut(s) 18, 909, 1272, 1666, 1876, 2108, 3249, 3676
HphI GGTGA 8 cut(s) 212, 500, 1246, 1286, 2065, 2277, 3223, 3665
Hpy99I CGWCG 6 cut(s) 1375, 2044, 2337, 2633, 2675, 3211
HpyAV CCTTC 6 cut(s) 17, 127, 487, 2126, 2744, 2821
HpyCH4IV ACGT 6 cut(s) 927, 1065, 3066, 3541, 3702, 3755
HpyF3I CTNAG 7 cut(s) 392, 1479, 1767, 2100, 2560, 2943, 3735
HpySE526I ACGT 6 cut(s) 927, 1065, 3066, 3541, 3702, 3755
Hsp92I GRCGYC 2 cut(s) 15, 3702
KasI GGCGCC 1 cut(s) 14
Kpn2I TCCGGA 1 cut(s) 1875
Ksp22I TGATCA 3 cut(s) 921, 930, 3759
KspAI GTTAAC 3 cut(s) 585, 1663, 2919
KspI CCGCGG 1 cut(s) 1577
LmnI GCTCC 5 cut(s) 152, 305, 1790, 2061, 2965
MaeI CTAG 6 cut(s) 1445, 1991, 2459, 2859, 3320, 3456
MaeII ACGT 6 cut(s) 927, 1065, 3066, 3541, 3702, 3755
MaeIII GTNAC 9 cut(s) 8, 371, 634, 982, 1127, 2266, 3089, 3222, 3470
MbiI CCGCTC 2 cut(s) 1185, 2056
MfeI CAATTG 1 cut(s) 3290
MflI RGATCY 3 cut(s) 1570, 2103, 3129
MhlI GDGCHC 4 cut(s) 1509, 2458, 3279, 3595
Mly113I GGCGCC 1 cut(s) 15
MlyI GAGTC 8 cut(s) 23, 631, 1662, 2053, 2193, 3026, 3413, 3739
MmeI TCCRAC 2 cut(s) 311, 3039
Mph1103I ATGCAT 1 cut(s) 2473
MroI TCCGGA 1 cut(s) 1875
MroXI GAANNNNTTC 2 cut(s) 1359, 2618
MslI CAYNNNNRTG 4 cut(s) 938, 976, 3482, 3662
MspA1I CMGCKG 8 cut(s) 514, 1576, 1737, 2210, 2790, 2990, 3422, 3526
MspCI CTTAAG 2 cut(s) 1301, 3094
MspI CCGG 8 cut(s) 18, 909, 1272, 1666, 1876, 2108, 3249, 3676
MspR9I CCNGG 3 cut(s) 2108, 2903, 3120
MunI CAATTG 1 cut(s) 3290
Mva1269I GAATGC 3 cut(s) 792, 1762, 3123
MvaI CCWGG 2 cut(s) 2903, 3120
NarI GGCGCC 1 cut(s) 15
NciI CCSGG 1 cut(s) 2108
NcoI CCATGG 3 cut(s) 483, 621, 2922
NheI GCTAGC 1 cut(s) 1444
NlaIV GGNNCC 2 cut(s) 16, 1927
NmuCI GTSAC 3 cut(s) 8, 634, 3089
NruI TCGCGA 1 cut(s) 3005
NsbI TGCGCA 1 cut(s) 1686
NsiI ATGCAT 1 cut(s) 2473
NspV TTCGAA 1 cut(s) 1883
OliI CACNNNNGTG 2 cut(s) 3482, 3662
PaeR7I CTCGAG 3 cut(s) 639, 2404, 3034
PagI TCATGA 1 cut(s) 1834
PauI GCGCGC 1 cut(s) 1605
PcsI WCGNNNNNNNCGW 3 cut(s) 411, 3009, 3203
PctI GAATGC 3 cut(s) 792, 1762, 3123
PdmI GAANNNNTTC 2 cut(s) 1359, 2618
PinAI ACCGGT 2 cut(s) 908, 3675
PleI GAGTC 8 cut(s) 23, 631, 1661, 2052, 2192, 3026, 3412, 3739
PluTI GGCGCC 1 cut(s) 18
PmaCI CACGTG 1 cut(s) 3542
PmlI CACGTG 1 cut(s) 3542
PpsI GAGTC 8 cut(s) 23, 631, 1661, 2052, 2192, 3026, 3412, 3739
Ppu21I YACGTR 1 cut(s) 3542
PshBI ATTAAT 1 cut(s) 1296
PsiI TTATAA 2 cut(s) 783, 2555
Psp124BI GAGCTC 2 cut(s) 2458, 3279
Psp1406I AACGTT 2 cut(s) 3066, 3755
Psp6I CCWGG 2 cut(s) 2901, 3118
PspCI CACGTG 1 cut(s) 3542
PspGI CCWGG 2 cut(s) 2901, 3118
PspN4I GGNNCC 2 cut(s) 16, 1927
PspPI GGNCC 1 cut(s) 2753
PspXI VCTCGAGB 3 cut(s) 639, 2404, 3034
PstI CTGCAG 2 cut(s) 1012, 3427
PstNI CAGNNNCTG 2 cut(s) 683, 2315
PsuI RGATCY 3 cut(s) 1570, 2103, 3129
PteI GCGCGC 1 cut(s) 1605
PvuII CAGCTG 3 cut(s) 514, 2210, 2990
RruI TCGCGA 1 cut(s) 3005
RsaI GTAC 4 cut(s) 767, 1281, 2413, 2953
RsaNI GTAC 4 cut(s) 766, 1280, 2412, 2952
RseI CAYNNNNRTG 4 cut(s) 938, 976, 3482, 3662
SacI GAGCTC 2 cut(s) 2458, 3279
SacII CCGCGG 1 cut(s) 1577
Sau96I GGNCC 1 cut(s) 2753
ScaI AGTACT 2 cut(s) 1281, 2953
SchI GAGTC 8 cut(s) 23, 631, 1662, 2053, 2193, 3026, 3413, 3739
ScrFI CCNGG 3 cut(s) 2108, 2903, 3120
SduI GDGCHC 4 cut(s) 1509, 2458, 3279, 3595
SfcI CTRYAG 4 cut(s) 1008, 2127, 3423, 3534
SfoI GGCGCC 1 cut(s) 16
Sfr274I CTCGAG 3 cut(s) 639, 2404, 3034
Sfr303I CCGCGG 1 cut(s) 1577
SfuI TTCGAA 1 cut(s) 1883
SgrBI CCGCGG 1 cut(s) 1577
SinI GGWCC 1 cut(s) 2753
SlaI CTCGAG 3 cut(s) 639, 2404, 3034
SmiMI CAYNNNNRTG 4 cut(s) 938, 976, 3482, 3662
SmlI CTYRAG 6 cut(s) 639, 1301, 2404, 3034, 3094, 3278
SmoI CTYRAG 6 cut(s) 639, 1301, 2404, 3034, 3094, 3278
SpeI ACTAGT 1 cut(s) 3319
SspDI GGCGCC 1 cut(s) 14
SspMI CTAG 6 cut(s) 1445, 1991, 2459, 2859, 3320, 3456
SstI GAGCTC 2 cut(s) 2458, 3279
StyD4I CCNGG 3 cut(s) 2106, 2901, 3118
StyI CCWWGG 7 cut(s) 286, 483, 621, 1972, 1996, 2922, 2979
TaiI ACGT 6 cut(s) 930, 1068, 3069, 3544, 3705, 3758
TaqII GACCGA 1 cut(s) 3651
TatI WGTACW 3 cut(s) 765, 1279, 2951
TauI GCSGC 5 cut(s) 359, 665, 2855, 3398, 3422
TscAI CASTG 6 cut(s) 817, 1206, 1924, 2536, 3060, 3486
TseFI GTSAC 3 cut(s) 8, 634, 3089
Tsp45I GTSAC 3 cut(s) 8, 634, 3089
TspGWI ACGGA 2 cut(s) 1774, 3282
TspRI CASTG 6 cut(s) 817, 1206, 1924, 2536, 3060, 3486
Vha464I CTTAAG 2 cut(s) 1301, 3094
VpaK11BI GGWCC 1 cut(s) 2753
VspI ATTAAT 1 cut(s) 1296
XapI RAATTY 7 cut(s) 275, 1240, 1879, 1885, 2337, 2937, 3446
XcmI CCANNNNNNNNNTGG 2 cut(s) 2030, 3664
XhoI CTCGAG 3 cut(s) 639, 2404, 3034
XmiI GTMKAC 3 cut(s) 282, 905, 2832
XmnI GAANNNNTTC 2 cut(s) 1359, 2618
XspI CTAG 6 cut(s) 1445, 1991, 2459, 2859, 3320, 3456
ZraI GACGTC 1 cut(s) 3703
ZrmI AGTACT 2 cut(s) 1281, 2953
Zsp2I ATGCAT 1 cut(s) 2473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.