Rw4G023950

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Forward (+)
49711348 .. 49746541
35194 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G023950.1

Sequence Viewer

Length: 3894 bp
ATGGGTGATCAGGAGAATCCTTTGGATGGAGATCATGTGATCAGAGAGGAAGCTGCCGCGTCGAAAAGTCAATCAGCAGTGCCGGAATCCCAGAACGGACCGGAAAATACTAGTAACAACGAAGATGCAAGCAAGCGCAAGGAGGGTGGCACCAAGGCAGTACCCTTTTTCAAGCTCTTCTCATTTGCTGATTCCATGGATTACTTGCTAATGTCGGTTGGTACGATTAGCGCAATTGGAAATGGAATGTGTTTGCCTCTAATGACCGTAATCATGGGAGATGTGATTAATTCTTTTGGAGAATCTGGGAATTCCAATAAAGTGGTTGATACAGTGTCTAAGTTCGTCTACTTGGCTTTGGGAGCTGCAGCTGCTTCATTTCTACAGATGTCTTGTTGGATGATCACCGGAGAGAGACAGGCTGCGAGAATAAGATTTTTATACTTGAAAACAATATTGAGGCAAGACGTAGGCTTTTTTGATAAAGAAACTAGCACTGGAGAAGTTATTGGGAGGATGTCAGGTGATACTGTGCTCATTCAGGAGGCCATGGGAGAGAAGGTAGGAACTTGTATCCAGTTATTTGCAACATTCTTTGGAGGCTTTATCATAGCCTTTGTTAAGGGATGGCTTCTTACCCTGGTCATGCTTTCTTCTATCCCCGCTCTTGTCATCTCTGGTGCTGTCATGAGCATCATCGTATCAAAGTTGGCATCTCGAGGACAAGCTGCTTATTCAGCAGCAGCATCTGTGGTTGAGCAGACAATTGGTTCAATAAGAACTGTTGCATCATTTACAGGGGAGAAACAAGCTATAACTAAGTACAACAGCTCTATAAATAAAGCTTACAAGTCTGGTGTGCAAGAGGGTTTGGCATCTGGGTTGGGTATCGGTTCAGTTATGCTTATTATATTCTGTAGTTATGCTTTGGCTATATGGTATGGCGGAAAAATGATACTTGAAAAGGGATATAAAGGAGGAGATGTCATAAATGTAGTTTTTGCTGTGTTGACTGGCTCCTTCTCTCTTGGGCAGACATCTCCATGCTTGGCCGCATTTGCTTCTGGGAAAGCTGCAGCTTATAAGATGTTTGAGACAATTAGCAGAAACCCAGAGATAGATGCTTCTGATACTAAAGGGAAGCAATTACAAGATATTAGAGGAGACATAGAACTGAGGGATGTTCATTTTAGTTATCCTGCAAGACCAGATGAACATATATTCCGTGGATTTTCTCTCACAATACCTAGTGGTGCAACTGCTGCTTTGGTAGGACAGAGCGGAAGTGGTAAATCGACTGTAATCAGTTTGATTGAGAGATTTTATGACCCACAGGCCGGTGAAGTTCTTATTGACGGTGTCAATCTAAAAGAGTTCCAGCTGAAATGGATCAGGCAGAAAATAGGTCTTGTCAGCCAGGAACCTGTATTGTTTACTTGCAGCATTAGAGATAATATTGGCTATGGGAAGGATGGTGCAACTACTGAAGAGATAAGGGCTGCTGCTGAGCTTGCCAATGCTGCTAAATTCATAGACAAACTTCCTCAGGGACTAGATACAATGGTGGGTGAGCATGGAACTCAACTATCTGGGGGCCAAAAGCAGAGAGTTGCTATAGCTCGAGCAATTCTAAAAAACCCAAGAATTCTACTTCTAGATGAAGCCACAAGTGCTCTTGACGCAGAATCTGAGAGAGTTGTGCAGGAGGCACTGGATAGAATTATGGTTAACCGGACTACCGTCATAGTAGCCCATCGCTTGAGCACAGTAAGGAATGCTGATACCATTGCTGTAATACATCGAGGAACAATTGTTGAACAAGGACCACATTCCGAGCTAGTTAAGGATCCTGAGGGAGCATATAGCCAGCTTATAAGACTACAAGAAACCAGAACTGTGTCAGAACAGACTGGTGTAAATGATCAGGATAGGCCAGATATTTCTTCCGATTCTCGGAGACGGTCAAGTCAAAGATTTTCTTTATTAAGATCCATAAGCCGTGGATCATCTGGAAGAGCAAATAGTATTCGTCATTCATTCTCAATCTCATTTGGTGGTGCACCTGCTGCAATCGGCATCCTTGAAACAAATCCTGCTGAACCTGATACTCATGCTCCAGCATCATCAAAAGGGCATCCAGAAGTCTCACTTAGCCGCCTAGCTGCCCTGAACAAGCCAGAGATCCCAGTGCTGCTTCTTGGTACTTTAGCTGCAGCAGCCAATGGGGCGATCTTACCTGTTTTTGGGATACTAATATCCAGTGTAATCAAGACCTTCTTTGAGCCACCTGATCAACTGAGTAAGGATTCAAAGTTTTGGGCATTAATCTTTGTTGTTCTTGGAGTTGCATCGTTCTTGGCACAATCATCAAGAGCATATCTTTTTGGTGTGGCTGGATGTAAGTTGATAAGAAGAGTTCGATCAAAGTGCTTTGAGAAGGTGGTTTACATGGACATAGGTTGGTTTGATGAGTCTGATCATTCAAGTGGTGCAATTGGGGCAAGGCTTTCTACAGATGCGGCTTCTCTAAGAGGGTTGGTTGGAGATGCTCTAGGTTTGTTGGTTCAGAATATAGCAACTGCAGTTGCCGGCCTAGTTATTGCTTTCGTAGCAAATTGGCAATTGGCTCTTATAATCCTTGTCCTGCTGCCAATGTTAGGAGTCAGTGGATATTTTCAAGTCAAGTTAATGAAAGGGTTCAGTGCAGATGCAAAGAAAATGTACGAGGACGCAAGCCAAGTAGCCAATGATGCTGTTGGGAGTATTAGAACAATTGCTTCCTTTTGTGCTGAAGAGAAGGTGATGGAACTGTACCAGGAAAAATGCGAAGGTCCTATTAAAAGTGGGATAAGACAAGGCTTAGTTAGCGGAATTGGTTTTGGGCTATCGTTCTTTTTGCTATTTTCTGTGTATGCCTGCAGTTTCTATGCTGGAGCCCGACTTGTTGCAGCAGGCAAGACAGAATTTTCTGACGTGTTTCGGGTTTTCTTTGCTCTCACTATGACAGCGGTTGGAATATCTCAGTCGAACTCCCTATCCCCTGATGTAAGTAAAGGAAAGAGTTCTGCTTCTTCCATATTTGCAATTCTTGACGGCAAGTCAAAAATAGACTCTAGTGACGACTCTGGAACTGCAATAGAAAATGTGAAGGGAGATATTGAACTACGCCATGTCAGCTTCAAGTATCCAACTAGACCCAACGTGCCAATCTTCCAAGATCTTTGCTTGACCATTCATCATGGCAAGACGGTTGCTCTGGTTGGAGAAAGTGGTAGTGGGAAGTCGACAGTGATCTCATTGTTGCAGAGATTTTATGACCCTGATTCAGGTCACATTACATTAGATGGAATCGAAATCCAAAAGCTACAACTGAAGTGGTTGAGACAGCAAATGGGGCTGGTGAGCCAAGAGCCTCTGCTGTTTAATGACACTATCCGAGCCAACATTGCATATGGAAAGGATGGGAATGCAACCGAAGCTGAAATTATAGCTGCAGCAGAATTGGCAAATGCCCACAAGTTCATCAGTAGCTTACAACAGGGTTACGATACAGTAGTAGGAGAGCGGGGGGTCCAAATGTCAGGTGGACAGAAGCAAAGGGTGGCAATTGCACGAGCTATTATGAAGGCGCCAAAGATATTACTCCTAGATGAGGCCACCAGTGCACTCGATGCTGAATCTGAACGAGTCGTTCAAGATGCATTGGACAGAGTAATGGTGGATCGAACAACAGTGGTGGTTGCTCATCGGTTATCGACAATCAGAAGTGCAGATTTGATAGCAGTGGTAAAGAATGGAGTCATTGCAGAGAAAGGAAAGCATGAGACTTTGATCAATATCAAGGATGGCACTTATGCTTCTCTGGTAGCATTACATGCAAGTGCCTCTTCTTAG

Protein Analysis

1297

Amino Acids

138.97

Weight (kDa)

7.04

Isoelectric Point (pI)

38.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 73 - 341 9.1e-59 ABC transporter transmembrane region
ABC_tran PF00005 409 - 557 8.6e-34 ABC transporter
ABC_membrane PF00664 731 - 1004 6.1e-62 ABC transporter transmembrane region
ABC_tran PF00005 1072 - 1221 7.9e-35 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1083, 1874, 2633
AarI CACCTGC 1 cut(s) 2071
AasI GACNNNNNNGTC 1 cut(s) 1965
Acc36I ACCTGC 1 cut(s) 2071
AccB1I GGYRCC 2 cut(s) 149, 3628
AccBSI CCGCTC 3 cut(s) 665, 1281, 3565
AccI GTMKAC 2 cut(s) 348, 3284
AccII CGCG 1 cut(s) 59
AclWI GGATC 7 cut(s) 1397, 1841, 1854, 1983, 2011, 2176, 3729
AcoI YGGCCR 1 cut(s) 1050
AcsI RAATTY 4 cut(s) 310, 1526, 1644, 2963
AcuI CTGAAG 3 cut(s) 1506, 2811, 3392
AcyI GRCGYC 1 cut(s) 3629
AfaI GTAC 6 cut(s) 162, 223, 824, 2203, 2723, 2813
AfiI CCNNNNNNNGG 7 cut(s) 26, 1337, 1953, 2243, 2657, 3326, 3652
AflIII ACRYGT 1 cut(s) 2973
AhdI GACNNNNNGTC 1 cut(s) 3097
AhlI ACTAGT 1 cut(s) 110
AjiI CACGTC 1 cut(s) 2974
AjnI CCWGG 3 cut(s) 639, 1416, 2814
AloI GAACNNNNNNTCC 4 cut(s) 1206, 1238, 3020, 3052
Alw21I GWGCWC 5 cut(s) 537, 1675, 1766, 2062, 3667
Alw26I GTCTC 7 cut(s) 409, 1088, 1158, 1951, 2149, 3376, 3818
Alw44I GTGCAC 2 cut(s) 2058, 3663
AlwI GGATC 7 cut(s) 1397, 1841, 1854, 1983, 2011, 2176, 3729
AlwNI CAGNNNCTG 2 cut(s) 749, 1688
Ama87I CYCGRG 2 cut(s) 717, 1620
AoxI GGCC 7 cut(s) 546, 1050, 1335, 1594, 1931, 2590, 3654
ApaLI GTGCAC 2 cut(s) 2058, 3663
ApoI RAATTY 4 cut(s) 310, 1526, 1644, 2963
AseI ATTAAT 2 cut(s) 288, 2324
Asp700I GAANNNNTTC 2 cut(s) 2696, 3061
AspLEI GCGC 3 cut(s) 138, 233, 3631
AspS9I GGNCC 5 cut(s) 98, 1594, 1823, 2831, 3571
AsuHPI GGTGA 7 cut(s) 17, 397, 536, 1352, 1580, 2812, 3412
AvaI CYCGRG 2 cut(s) 717, 1620
AvaII GGWCC 4 cut(s) 98, 1823, 2831, 3571
AxyI CCTNAGG 2 cut(s) 1545, 1851
BaeGI GKGCMC 2 cut(s) 2062, 3667
BaeI ACNNNNGTAYC 4 cut(s) 1548, 1581, 3540, 3573
BamHI GGATCC 1 cut(s) 1846
BanI GGYRCC 2 cut(s) 149, 3628
BanII GRGCYC 1 cut(s) 2938
BarI GAAGNNNNNNTAC 2 cut(s) 2429, 2461
BauI CACGAG 1 cut(s) 3612
Bbv12I GWGCWC 5 cut(s) 537, 1675, 1766, 2062, 3667
BccI CCATC 8 cut(s) 20, 621, 1466, 1761, 2797, 3338, 3455, 3839
BceAI ACGGC 2 cut(s) 1983, 3109
BcgI CGANNNNNNTGC 2 cut(s) 2409, 2443
BciT130I CCWGG 3 cut(s) 641, 1418, 2816
BciVI GTATCC 3 cut(s) 584, 2241, 3195
BclI TGATCA 7 cut(s) 7, 39, 402, 1921, 2290, 2476, 3831
BcoDI GTCTC 7 cut(s) 409, 1088, 1158, 1951, 2149, 3376, 3818
BcuI ACTAGT 1 cut(s) 110
BfoI RGCGCY 1 cut(s) 3632
BfuAI ACCTGC 1 cut(s) 2071
BfuI GTATCC 3 cut(s) 584, 2241, 3195
BglI GCCNNNNNGGC 1 cut(s) 2225
BglII AGATCT 1 cut(s) 3217
BlpI GCTNAGC 1 cut(s) 1506
Bme1390I CCNGG 3 cut(s) 641, 1418, 2816
Bme18I GGWCC 4 cut(s) 98, 1823, 2831, 3571
BmeRI GACNNNNNGTC 1 cut(s) 3097
BmeT110I CYCGRG 2 cut(s) 717, 1620
BmgBI CACGTC 1 cut(s) 2974
BmgT120I GGNCC 5 cut(s) 98, 1594, 1823, 2831, 3571
BmiI GGNNCC 8 cut(s) 151, 1018, 1422, 1595, 1848, 2935, 3572, 3630
BmrFI CCNGG 3 cut(s) 641, 1418, 2816
BmrI ACTGGG 1 cut(s) 2180
BmuI ACTGGG 1 cut(s) 2180
BoxI GACNNNNGTC 1 cut(s) 1739
BpmI CTGGAG 3 cut(s) 519, 2100, 2952
Bpu1102I GCTNAGC 1 cut(s) 1506
BpuEI CTTGAG 1 cut(s) 1780
BsaBI GATNNNNATC 2 cut(s) 30, 3836
BsaHI GRCGYC 1 cut(s) 3629
BsaJI CCNNGG 6 cut(s) 153, 195, 549, 639, 1225, 1999
BsaWI WCCGGW 3 cut(s) 100, 407, 1731
BsaXI ACNNNNNCTCC 8 cut(s) 21, 51, 546, 576, 969, 999, 2098, 2128
Bsc4I CCNNNNNNNGG 7 cut(s) 26, 1337, 1953, 2243, 2657, 3326, 3652
Bse118I RCCGGY 2 cut(s) 1337, 2588
Bse1I ACTGG 8 cut(s) 502, 577, 1018, 1716, 1915, 2186, 2259, 3660
Bse21I CCTNAGG 2 cut(s) 1545, 1851
Bse3DI GCAATG 3 cut(s) 1785, 3444, 3801
Bse8I GATNNNNATC 2 cut(s) 30, 3836
BseBI CCWGG 3 cut(s) 641, 1418, 2816
BseDI CCNNGG 6 cut(s) 153, 195, 549, 639, 1225, 1999
BseJI GATNNNNATC 2 cut(s) 30, 3836
BseLI CCNNNNNNNGG 7 cut(s) 26, 1337, 1953, 2243, 2657, 3326, 3652
BseMI GCAATG 3 cut(s) 1785, 3444, 3801
BseMII CTCAG 7 cut(s) 1166, 1497, 1559, 1680, 1842, 2288, 3035
BseNI ACTGG 8 cut(s) 502, 577, 1018, 1716, 1915, 2186, 2259, 3660
BseRI GAGGAG 2 cut(s) 993, 1176
BseSI GKGCMC 2 cut(s) 2062, 3667
BsgI GTGCAG 3 cut(s) 1721, 2724, 3789
Bsh1236I CGCG 1 cut(s) 59
BshFI GGCC 7 cut(s) 548, 1052, 1337, 1596, 1933, 2592, 3656
BshNI GGYRCC 2 cut(s) 149, 3628
BsiHKAI GWGCWC 5 cut(s) 537, 1675, 1766, 2062, 3667
BsiHKCI CYCGRG 2 cut(s) 717, 1620
BsiSI CCGG 6 cut(s) 83, 101, 408, 1338, 1732, 2589
BslFI GGGAC 1 cut(s) 1563
BslI CCNNNNNNNGG 7 cut(s) 26, 1337, 1953, 2243, 2657, 3326, 3652
BsmAI GTCTC 7 cut(s) 409, 1088, 1158, 1951, 2149, 3376, 3818
BsmBI CGTCTC 1 cut(s) 1951
BsmFI GGGAC 1 cut(s) 1563
BsmI GAATGC 2 cut(s) 1780, 3472
BsnI GGCC 7 cut(s) 548, 1052, 1337, 1596, 1933, 2592, 3656
BsoBI CYCGRG 2 cut(s) 717, 1620
Bsp1286I GDGCHC 6 cut(s) 537, 1675, 1766, 2062, 2938, 3667
Bsp1720I GCTNAGC 1 cut(s) 1506
Bsp19I CCATGG 2 cut(s) 195, 549
BspANI GGCC 7 cut(s) 548, 1052, 1337, 1596, 1933, 2592, 3656
BspCNI CTCAG 7 cut(s) 1167, 1498, 1558, 1681, 1843, 2289, 3034
BspFNI CGCG 1 cut(s) 59
BspHI TCATGA 1 cut(s) 687
BspLI GGNNCC 8 cut(s) 151, 1018, 1422, 1595, 1848, 2935, 3572, 3630
BspMAI CTGCAG 6 cut(s) 370, 1078, 2215, 2584, 2921, 3496
BspMI ACCTGC 1 cut(s) 2071
BspPI GGATC 7 cut(s) 1397, 1841, 1854, 1983, 2011, 2176, 3729
BspQI GCTCTTC 2 cut(s) 182, 2008
BspT107I GGYRCC 2 cut(s) 149, 3628
BsrBI CCGCTC 3 cut(s) 665, 1281, 3565
BsrDI GCAATG 3 cut(s) 1785, 3444, 3801
BsrFI RCCGGY 2 cut(s) 1337, 2588
BsrI ACTGG 8 cut(s) 502, 577, 1018, 1716, 1915, 2186, 2259, 3660
BssAI RCCGGY 2 cut(s) 1337, 2588
BssECI CCNNGG 6 cut(s) 153, 195, 549, 639, 1225, 1999
BssNI GRCGYC 1 cut(s) 3629
BssSI CACGAG 1 cut(s) 3612
BssT1I CCWWGG 3 cut(s) 153, 195, 549
Bst2BI CACGAG 1 cut(s) 3612
Bst2UI CCWGG 3 cut(s) 641, 1418, 2816
Bst6I CTCTTC 5 cut(s) 182, 1482, 2008, 2407, 2787
BstACI GRCGYC 1 cut(s) 3629
BstAPI GCANNNNNTGC 4 cut(s) 1262, 2066, 3671, 3875
BstC8I GCNNGC 8 cut(s) 130, 134, 1512, 1868, 2590, 2734, 2917, 2953
BstDSI CCRYGG 4 cut(s) 195, 549, 1225, 1999
BstENI CCTNNNNNAGG 2 cut(s) 3324, 3650
BstFNI CGCG 1 cut(s) 59
BstH2I RGCGCY 1 cut(s) 3632
BstHHI GCGC 3 cut(s) 138, 233, 3631
BstMAI GTCTC 7 cut(s) 409, 1088, 1158, 1951, 2149, 3376, 3818
BstNI CCWGG 3 cut(s) 641, 1418, 2816
BstNSI RCATGY 1 cut(s) 3878
BstPAI GACNNNNGTC 1 cut(s) 1739
BstSCI CCNGG 3 cut(s) 639, 1416, 2814
BstSLI GKGCMC 2 cut(s) 2062, 3667
BstUI CGCG 1 cut(s) 59
BstX2I RGATCY 4 cut(s) 1846, 1988, 2181, 3217
BstXI CCANNNNNNTGG 1 cut(s) 322
BstYI RGATCY 4 cut(s) 1846, 1988, 2181, 3217
Bsu36I CCTNAGG 2 cut(s) 1545, 1851
BsuI GTATCC 3 cut(s) 584, 2241, 3195
BsuRI GGCC 7 cut(s) 548, 1052, 1337, 1596, 1933, 2592, 3656
BtgI CCRYGG 4 cut(s) 195, 549, 1225, 1999
BtgZI GCGATG 1 cut(s) 1739
BtrI CACGTC 1 cut(s) 2974
BtsI GCAGTG 2 cut(s) 84, 3789
BveI ACCTGC 1 cut(s) 2071
Cac8I GCNNGC 8 cut(s) 130, 134, 1512, 1868, 2590, 2734, 2917, 2953
CaiI CAGNNNCTG 2 cut(s) 749, 1688
CciI TCATGA 1 cut(s) 687
CfoI GCGC 3 cut(s) 138, 233, 3631
Cfr10I RCCGGY 2 cut(s) 1337, 2588
Cfr13I GGNCC 5 cut(s) 98, 1594, 1823, 2831, 3571
CpoI CGGWCCG 1 cut(s) 98
CseI GACGC 3 cut(s) 48, 1688, 2738
Csp6I GTAC 6 cut(s) 161, 222, 823, 2202, 2722, 2812
CspCI CAANNNNNGTGG 6 cut(s) 127, 162, 3356, 3391, 3717, 3752
CspI CGGWCCG 1 cut(s) 98
CviQI GTAC 6 cut(s) 161, 222, 823, 2202, 2722, 2812
DinI GGCGCC 1 cut(s) 3630
DrdI GACNNNNNNGTC 1 cut(s) 1965
DriI GACNNNNNGTC 1 cut(s) 3097
DseDI GACNNNNNNGTC 1 cut(s) 1965
EaeI YGGCCR 1 cut(s) 1050
Eam1104I CTCTTC 5 cut(s) 182, 1482, 2008, 2407, 2787
Eam1105I GACNNNNNGTC 1 cut(s) 3097
EarI CTCTTC 5 cut(s) 182, 1482, 2008, 2407, 2787
EciI GGCGGA 1 cut(s) 960
Eco130I CCWWGG 3 cut(s) 153, 195, 549
Eco24I GRGCYC 1 cut(s) 2938
Eco47I GGWCC 4 cut(s) 98, 1823, 2831, 3571
Eco57I CTGAAG 3 cut(s) 1506, 2811, 3392
Eco81I CCTNAGG 2 cut(s) 1545, 1851
Eco88I CYCGRG 2 cut(s) 717, 1620
EcoNI CCTNNNNNAGG 2 cut(s) 3324, 3650
EcoO109I RGGNCCY 1 cut(s) 2831
EcoRI GAATTC 2 cut(s) 310, 1644
EcoRII CCWGG 3 cut(s) 639, 1416, 2814
EcoT14I CCWWGG 3 cut(s) 153, 195, 549
EcoT22I ATGCAT 1 cut(s) 3703
EcoT38I GRGCYC 1 cut(s) 2938
EgeI GGCGCC 1 cut(s) 3630
EheI GGCGCC 1 cut(s) 3630
ErhI CCWWGG 3 cut(s) 153, 195, 549
Esp3I CGTCTC 1 cut(s) 1951
FalI AAGNNNNNCTT 7 cut(s) 1963, 1995, 2133, 2165, 2261, 2293, 3871
FaqI GGGAC 1 cut(s) 1563
FauI CCCGC 2 cut(s) 670, 3558
FauNDI CATATG 1 cut(s) 3451
FbaI TGATCA 7 cut(s) 7, 39, 402, 1921, 2290, 2476, 3831
FblI GTMKAC 2 cut(s) 348, 3284
FriOI GRGCYC 1 cut(s) 2938
GlaI GCGC 3 cut(s) 137, 232, 3630
GsuI CTGGAG 3 cut(s) 519, 2100, 2952
HaeII RGCGCY 1 cut(s) 3632
HaeIII GGCC 7 cut(s) 548, 1052, 1337, 1596, 1933, 2592, 3656
HapII CCGG 6 cut(s) 83, 101, 408, 1338, 1732, 2589
HgaI GACGC 3 cut(s) 48, 1688, 2738
HhaI GCGC 3 cut(s) 138, 233, 3631
Hin1I GRCGYC 1 cut(s) 3629
Hin6I GCGC 3 cut(s) 136, 231, 3629
HinP1I GCGC 3 cut(s) 136, 231, 3629
HincII GTYRAC 3 cut(s) 1011, 1729, 3285
HindII GTYRAC 3 cut(s) 1011, 1729, 3285
HindIII AAGCTT 1 cut(s) 843
HpaI GTTAAC 1 cut(s) 1729
HpaII CCGG 6 cut(s) 83, 101, 408, 1338, 1732, 2589
HphI GGTGA 7 cut(s) 17, 397, 536, 1352, 1580, 2812, 3412
Hpy166II GTNNAC 9 cut(s) 349, 1011, 1434, 1729, 2060, 2446, 3285, 3587, 3665
Hpy8I GTNNAC 9 cut(s) 349, 1011, 1434, 1729, 2060, 2446, 3285, 3587, 3665
Hpy99I CGWCG 1 cut(s) 64
HpyAV CCTTC 9 cut(s) 553, 1030, 1462, 2284, 2431, 2791, 2822, 3142, 3619
HpyCH4IV ACGT 3 cut(s) 468, 2973, 3201
HpySE526I ACGT 3 cut(s) 468, 2973, 3201
Hsp92I GRCGYC 1 cut(s) 3629
HspAI GCGC 3 cut(s) 136, 231, 3629
KasI GGCGCC 1 cut(s) 3628
KroI GCCGGC 1 cut(s) 2588
KroNI GCCGGC 1 cut(s) 2590
Ksp22I TGATCA 7 cut(s) 7, 39, 402, 1921, 2290, 2476, 3831
KspAI GTTAAC 1 cut(s) 1729
LguI GCTCTTC 2 cut(s) 182, 2008
LmnI GCTCC 5 cut(s) 362, 1022, 1856, 2119, 2933
MaeII ACGT 3 cut(s) 468, 2973, 3201
MaeIII GTNAC 4 cut(s) 113, 3116, 3329, 3542
MbiI CCGCTC 3 cut(s) 665, 1281, 3565
MfeI CAATTG 7 cut(s) 234, 765, 1809, 2493, 2621, 2772, 3606
MflI RGATCY 4 cut(s) 1846, 1988, 2181, 3217
MhlI GDGCHC 6 cut(s) 537, 1675, 1766, 2062, 2938, 3667
Mly113I GGCGCC 1 cut(s) 3629
MlyI GAGTC 6 cut(s) 2480, 2670, 3104, 3116, 3696, 3807
MmeI TCCRAC 5 cut(s) 377, 2521, 2992, 3212, 3241
Mph1103I ATGCAT 1 cut(s) 3703
MroNI GCCGGC 1 cut(s) 2588
MroXI GAANNNNTTC 2 cut(s) 2696, 3061
MseI TTAA 9 cut(s) 288, 621, 1728, 1842, 1985, 2324, 2687, 2838, 3423
MslI CAYNNNNRTG 3 cut(s) 1042, 2484, 3879
MspA1I CMGCKG 3 cut(s) 371, 1381, 3008
MspI CCGG 6 cut(s) 83, 101, 408, 1338, 1732, 2589
MspR9I CCNGG 3 cut(s) 641, 1418, 2816
MunI CAATTG 7 cut(s) 234, 765, 1809, 2493, 2621, 2772, 3606
Mva1269I GAATGC 2 cut(s) 1780, 3472
MvaI CCWGG 3 cut(s) 641, 1418, 2816
MvnI CGCG 1 cut(s) 59
NaeI GCCGGC 1 cut(s) 2590
NarI GGCGCC 1 cut(s) 3629
NcoI CCATGG 2 cut(s) 195, 549
NdeI CATATG 1 cut(s) 3451
NgoMIV GCCGGC 1 cut(s) 2588
NlaIV GGNNCC 8 cut(s) 151, 1018, 1422, 1595, 1848, 2935, 3572, 3630
NmuCI GTSAC 2 cut(s) 3116, 3329
NsiI ATGCAT 1 cut(s) 3703
NspI RCATGY 1 cut(s) 3878
PaeR7I CTCGAG 2 cut(s) 717, 1620
PagI TCATGA 1 cut(s) 687
PaqCI CACCTGC 1 cut(s) 2071
PciSI GCTCTTC 2 cut(s) 182, 2008
PcsI WCGNNNNNNNCGW 1 cut(s) 221
PctI GAATGC 2 cut(s) 1780, 3472
PdiI GCCGGC 1 cut(s) 2590
PdmI GAANNNNTTC 2 cut(s) 2696, 3061
PflFI GACNNNGTC 1 cut(s) 1358
PleI GAGTC 6 cut(s) 2479, 2669, 3104, 3116, 3695, 3806
PluTI GGCGCC 1 cut(s) 3632
PpsI GAGTC 6 cut(s) 2479, 2669, 3104, 3116, 3695, 3806
PpuMI RGGWCCY 1 cut(s) 2831
PshAI GACNNNNGTC 1 cut(s) 1739
PshBI ATTAAT 2 cut(s) 288, 2324
PsiI TTATAA 3 cut(s) 1083, 1874, 2633
Psp5II RGGWCCY 1 cut(s) 2831
Psp6I CCWGG 3 cut(s) 639, 1416, 2814
PspGI CCWGG 3 cut(s) 639, 1416, 2814
PspN4I GGNNCC 8 cut(s) 151, 1018, 1422, 1595, 1848, 2935, 3572, 3630
PspPI GGNCC 5 cut(s) 98, 1594, 1823, 2831, 3571
PspPPI RGGWCCY 1 cut(s) 2831
PspXI VCTCGAGB 1 cut(s) 1620
PstI CTGCAG 6 cut(s) 370, 1078, 2215, 2584, 2921, 3496
PstNI CAGNNNCTG 2 cut(s) 749, 1688
PsuI RGATCY 4 cut(s) 1846, 1988, 2181, 3217
PsyI GACNNNGTC 1 cut(s) 1358
PvuII CAGCTG 2 cut(s) 371, 1381
RsaI GTAC 6 cut(s) 162, 223, 824, 2203, 2723, 2813
RsaNI GTAC 6 cut(s) 161, 222, 823, 2202, 2722, 2812
RseI CAYNNNNRTG 3 cut(s) 1042, 2484, 3879
Rsr2I CGGWCCG 1 cut(s) 98
RsrII CGGWCCG 1 cut(s) 98
SalI GTCGAC 1 cut(s) 3283
SapI GCTCTTC 2 cut(s) 182, 2008
SaqAI TTAA 9 cut(s) 288, 621, 1728, 1842, 1985, 2324, 2687, 2838, 3423
Sau96I GGNCC 5 cut(s) 98, 1594, 1823, 2831, 3571
SchI GAGTC 6 cut(s) 2480, 2670, 3104, 3116, 3696, 3807
ScrFI CCNGG 3 cut(s) 641, 1418, 2816
SduI GDGCHC 6 cut(s) 537, 1675, 1766, 2062, 2938, 3667
SfoI GGCGCC 1 cut(s) 3630
Sfr274I CTCGAG 2 cut(s) 717, 1620
SinI GGWCC 4 cut(s) 98, 1823, 2831, 3571
SlaI CTCGAG 2 cut(s) 717, 1620
SmiMI CAYNNNNRTG 3 cut(s) 1042, 2484, 3879
SmlI CTYRAG 3 cut(s) 717, 1620, 1759
SmoI CTYRAG 3 cut(s) 717, 1620, 1759
SpeI ACTAGT 1 cut(s) 110
SspDI GGCGCC 1 cut(s) 3628
SspI AATATT 2 cut(s) 456, 1456
StyD4I CCNGG 3 cut(s) 639, 1416, 2814
StyI CCWWGG 3 cut(s) 153, 195, 549
TaiI ACGT 3 cut(s) 471, 2976, 3204
TatI WGTACW 1 cut(s) 822
TauI GCSGC 4 cut(s) 59, 1055, 2157, 2522
Tru1I TTAA 9 cut(s) 288, 621, 1728, 1842, 1985, 2324, 2687, 2838, 3423
Tru9I TTAA 9 cut(s) 288, 621, 1728, 1842, 1985, 2324, 2687, 2838, 3423
TseFI GTSAC 2 cut(s) 3116, 3329
Tsp45I GTSAC 2 cut(s) 3116, 3329
TspGWI ACGGA 2 cut(s) 111, 1214
Tth111I GACNNNGTC 1 cut(s) 1358
VneI GTGCAC 2 cut(s) 2058, 3663
VpaK11BI GGWCC 4 cut(s) 98, 1823, 2831, 3571
VspI ATTAAT 2 cut(s) 288, 2324
XagI CCTNNNNNAGG 2 cut(s) 3324, 3650
XapI RAATTY 4 cut(s) 310, 1526, 1644, 2963
XbaI TCTAGA 1 cut(s) 1654
XceI RCATGY 1 cut(s) 3878
XcmI CCANNNNNNNNNTGG 1 cut(s) 3581
XhoI CTCGAG 2 cut(s) 717, 1620
XmiI GTMKAC 2 cut(s) 348, 3284
XmnI GAANNNNTTC 2 cut(s) 2696, 3061
Zsp2I ATGCAT 1 cut(s) 3703
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.