Rh4CG293400

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Reverse (-)
55237594 .. 55243437
5844 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG293400.1

Sequence Viewer

Length: 3771 bp
ATGGCTGATCACGAAGAACAGTCAGATGGAGATGTATTAAAAGAGCCGGCCATGGCATCAACAAAGGCAGCAGATTCCGAAAACAACAAGCAGGATACTGCAGGCAAGAGCAAGGAGGGTGCAACCAACACAGTACCATATTACAAGCTCTTCTCATTTGCTGATTCCCTGGATTACCTGTTAATGTCTGTTGGTACGATCAGTGCTATCGGAAATGGAGTATGTATGCCTCTAATGACCGTGATCATGGGGGAGGTGATCAACTCTTTTGGAGAAACTACAAAAATGTCTTGCTGGATGATCACTGGAGAGAGACAGGCAGCAAGAATAAGAAGTTTATACTTGAAAACAATACTAAGGCAAGACGTTGGCTTTTTTGATACGGAGGCTAACACTGGGGAAATTGTTGGCAGGATGTCGGGGGATACTGTGCTCATTCAGGAAGCAATGGGGGAGAAAGTAGGAAGTTTTATCCAGTTAGTTGCTACATTCATAGGAGGCTTTGTTATAGCATTTGCCAAGGGATGGCGTCTCACCCTTGTCATGCTAACCTCTATTCCCCCTCTTATCTTATCCGGTGCTGTCATGAGCCTCACTATAAGGAAGTTGGCGTCCCGTGGACAAGAGGCATATTCAGTTGGAGCTACTGTTGTAGAGCAGACAATTGGATCTATCAGAACTGTTGCATCATTTACGGGGGAGAAGCAAGCTATAACCAAGTACAACAACTCCTTAACTAAAGCTTACAAGTCTGGTGTGCAAGAGGGTTTGGCATCAGGGTTGGGTCTTGGTATGGTTGTGCTTGTTGTATTCTGCAGTTATGCTTTGGCTGTATGGTATGGCGGAAAAACGATACTTGAACAGGGATATAAAGCAGGAGATGTCATGAATGTGATTTTTGCTGTATTGACCGGCTCTTTCTCTCTTGGGCAGGCATCTCCATGCGTGAGTGCATTTTCTGCTGGACAAGCTGCATCATTTAAGATGTTTGAGACAATTAACAGAAAGCCAGATATAGATGCTTATGACACTAATGGGATGGAATCAGAAGACATTCGTGGAGACATAGAACTTAGGGAAGTTTCTTTTAGTTATCCTGCAAGACCGGATGAAAAAATATTCCATGGATTCTCAATCTCAATATCTAGTGGTGCAACTGCTGCTTTGGTTGGACAGAGTGGAAGTGGTAAATCGACCGTAATTAGTTTGATTGAGAGATTTTATGACCCACAGGCTGGTGAAGTTCTTATTGACGGTATTAATCTCAAAGAGTTCCAGCTGAAATGGATCAGACAGAAAATAGGCCTTGTCAGCCAGGAACCTGTTTTGTTTACTTGCAGCATTAGAGATAATATTGGCTATGGGAAGGATGGCGCAACTACTGAAGAAATAAGGGCTGCTGCTGAGCTTGCCAATGCTGCAAAGTTCATAGACAAACTACCTCAGGGGCTAGATACAATGGTTGGTGAGCATGGAACTCAGCTATCTGGGGGCCAAAAGCAGAGAGTTGCTATAGCCAGAGCAATTTTAAAGAACCCAAAAATTCTTCTTTTAGATGAAGCAACAAGTGCTCTTGATGCAGAATCTGAGAGAGCTGTGCAAGAGGCATTGGACAGAATTATGGTTAGTCGGACTACTGTCATTGTAGCGCACCGCTTGAGCACAGTAAGGAATGCTGATACCATTGCAGTGATACATCGTGGAACAATTGTTGAGCAAGGACCACATGCTGAGCTAGTTAAGGATCCTGATGGTGCATATAGCCAGCTTATAAGGTTGCAAGAAATTAGCAGTGTGTCCGAACAGAATGCTCAAAATGATCATGAAAGGCCAGAACTTTCTTCAAGTTTTCAAAAATTTCCTTCCTTTCGCTCTATAAGTCGGGGATCATCTGGAAGAGGAAATAGTTACCGCCGCAGCCACTCATTCTCAATCTCACATGGTGCACCCACTGTGACCGGTGTCCTTGAAATAGAAACTGATATTCCGGCTTCAGAATCATCAGAAGTGCACCCACAAGTCTCACTTAGACGCCTGGCTCACCTGAATAAGCCAGAAATCCCAGTGCTATTCCTAGGTACTATAGCTGCAATAGTCAATGGGGTAACCTTGCCTATTTTCGGGGTGTTAATATCCAGTATAATCAAGACCTTCTTTGAGCCACCTCATCAACTCCGAAAGGATTCTAAGTTTTGGGCATTAATATTTATTGTTCTTGGAGTGGTGTCTCTCTTGGCACATCCAATGAGAGCATACTTTTTTGCTGTAGCTGGGTGCAAGTTAATAAGACGAGTCCGTTCACTATGCTTTGAGAAGGTGGTTTACATGGAAGTAAGTTGGTTTGATGAAGCTGATCACTCGAGTGGTGCAATTGGTGCAAGGCTTTCGGCAAATGCAGCTTCCCTACGGGGGATGGTTGGAGATGCTCTAGGTTTGGCTGTCATGAATACTTCAACTACAATTGCCGGGTTGGTTATTGCTTTTGTGGCAAATTGGCAACTCGCTCTTATAATACTTGTTATGCTGCCCCTACTAGGAATAAGTGGATATTTTCAAGTCGAGTTCCTGAAAGGATTAAGTGCAAATGCAAAGAAAATGTATGAAGATGCAAGCCAAGTAGCCACGGATGCTGTGGGGAGTATTAGAACAGTTGCTTCCTTTTGTGCTGAAGAAAAGGTGATCAAGTTGTACCAGACAAAATGTGAAGGCCCTATCAGGAGTGGGATAAGACAAGGGATAGTTAGTGGCATAGGCTTTGGGCTATCATTTTTCTTGCTTTATTCTGTATATGCATGCAGTTTTTATGCTGGGGCTCGACTTGTTGCAGCAGGCAAGACAACATTTCCTAATGTTTTTCGGGTTTTCTTTGCTCTCACTATGACAGCTATTGCATTGTCTCAACAGAGTTCTTTAGCCCCGGATGCAAGTAAAGGAAAGAGCTCTGCCGCTTCCATATTTGCAATTCTTGACCGGAAATCCAAGATAGATTCAAGTGATGACTCCGGAACGACAATAGAAAATATGAAGGGAGAAATTGAGTTTCGCCATGTTAGTTTCAAATATCCGAATAGACCTAATGTGCCAATCTTTCAGGATCTTTGCTTGACCATTCGCCATGGCAAGACAGTTGCTCTGGTTGGAGAGAGTGGAAGTGGGAAGTCGACAGTGATCTCATTGTTGCAGCGCTTTTATGATCCTGATTCAGGTCAAATTACATTAGATGGTACAGAAATGCAAACATTACAGTTGAAGTGGTTGAGACAGCAAATGGGGCTGGTGAGTCAGGAGCCCCTATTGTTTAATGACACAATCCGAGCCAACATTGCATATGGAAAGGAAGGAGAGGCAACTGAGGCTGAAATTATAGCAGCAGCAGAATTGGCAAATGCTCACAAGTTCATTAGTAGTTTACAACAGGGTTATGACACAATAGTGGGTGAACGAGGGGTTCAACTTTCTGGTGGACAGAAGCAAAGGGTAGCTATTGCAAGAGCTATAATGAAGGCACCAAAGATATTACTACTAGATGAAGCCACCAGTGCTCTTGATGCTGAATCCGAAAGAGTGGTTCAAGATGCACTGGATCGAGTTATGGTGGATCGAACTACAGTGGTGGTTGCCCATCGGCTATCTACAATTAAGGGTGCAGATTTAATAGCAGTGGTGAAAAATGGAGTCATTGCAGAGAAAGGAAAGCATGAAACTTTGATCAGTATCGAGGGTGGAACTTATGCTTCTTTGGTATCACTACATGCAAGTACCTCATCTTAG

Protein Analysis

1256

Amino Acids

135.41

Weight (kDa)

6.62

Isoelectric Point (pI)

34.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 87 - 307 2.1e-53 ABC transporter transmembrane region
ABC_tran PF00005 375 - 523 1.4e-33 ABC transporter
ABC_membrane PF00664 690 - 962 5e-57 ABC transporter transmembrane region
ABC_tran PF00005 1031 - 1180 4.1e-35 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1772, 2510
AccB1I GGYRCC 1 cut(s) 3505
AccB7I CCANNNNNTGG 2 cut(s) 525, 1235
AccI GTMKAC 1 cut(s) 3161
AccIII TCCGGA 1 cut(s) 3002
AciI CCGC 5 cut(s) 843, 1654, 1912, 1915, 2946
AclWI GGATC 9 cut(s) 676, 1295, 1739, 1752, 1894, 3102, 3188, 3591, 3606
AcoI YGGCCR 1 cut(s) 48
AcsI RAATTY 2 cut(s) 1542, 1856
AcuI CTGAAG 3 cut(s) 1404, 1977, 2688
AcyI GRCGYC 3 cut(s) 529, 611, 2032
AdeI CACNNNGTG 1 cut(s) 1943
AfaI GTAC 7 cut(s) 135, 196, 722, 2080, 2690, 3226, 3760
AfeI AGCGCT 1 cut(s) 3185
AfiI CCNNNNNNNGG 6 cut(s) 525, 1235, 2120, 2409, 2534, 3203
AgeI ACCGGT 1 cut(s) 1958
AjnI CCWGG 3 cut(s) 168, 1314, 2034
AleI CACNNNNGTG 2 cut(s) 2361, 3431
Alw21I GWGCWC 7 cut(s) 435, 1573, 1664, 1948, 2013, 2942, 3544
Alw26I GTCTC 8 cut(s) 307, 536, 986, 1056, 2026, 2232, 2901, 3253
Alw44I GTGCAC 2 cut(s) 1944, 2009
AlwI GGATC 9 cut(s) 676, 1295, 1739, 1752, 1894, 3102, 3188, 3591, 3606
AlwNI CAGNNNCTG 1 cut(s) 1586
Ama87I CYCGRG 1 cut(s) 2359
Aor13HI TCCGGA 1 cut(s) 3002
Aor51HI AGCGCT 1 cut(s) 3185
AoxI GGCC 5 cut(s) 48, 1303, 1492, 1829, 2707
ApaLI GTGCAC 2 cut(s) 1944, 2009
ApoI RAATTY 2 cut(s) 1542, 1856
AseI ATTAAT 2 cut(s) 1260, 2201
AsiGI ACCGGT 1 cut(s) 1958
Asp700I GAANNNNTTC 2 cut(s) 1053, 2182
AspA2I CCTAGG 1 cut(s) 2074
AspLEI GCGC 3 cut(s) 1376, 1651, 3186
AspS9I GGNCC 3 cut(s) 1492, 1721, 2708
AsuC2I CCSGG 2 cut(s) 2467, 2918
AsuHPI GGTGA 9 cut(s) 268, 526, 1250, 1478, 2033, 2689, 3289, 3449, 3676
AvaI CYCGRG 1 cut(s) 2359
AvaII GGWCC 1 cut(s) 1721
AvrII CCTAGG 1 cut(s) 2074
AxyI CCTNAGG 1 cut(s) 1443
BaeGI GKGCMC 2 cut(s) 1948, 2013
BaeI ACNNNNGTAYC 2 cut(s) 1446, 1479
BamHI GGATCC 1 cut(s) 1744
BanI GGYRCC 1 cut(s) 3505
BanII GRGCYC 3 cut(s) 2815, 2942, 3291
BarI GAAGNNNNNNTAC 2 cut(s) 2306, 2338
BbsI GAAGAC 1 cut(s) 1056
Bbv12I GWGCWC 7 cut(s) 435, 1573, 1664, 1948, 2013, 2942, 3544
BccI CCATC 8 cut(s) 20, 519, 1033, 1364, 1745, 2407, 3215, 3630
BcgI CGANNNNNNTGC 4 cut(s) 1790, 1824, 2367, 2401
BciT130I CCWGG 3 cut(s) 170, 1316, 2036
BciVI GTATCC 2 cut(s) 88, 418
BclI TGATCA 8 cut(s) 7, 243, 258, 300, 1819, 2353, 2679, 3708
BcnI CCSGG 2 cut(s) 2467, 2918
BcoDI GTCTC 8 cut(s) 307, 536, 986, 1056, 2026, 2232, 2901, 3253
BfaI CTAG 7 cut(s) 1146, 1451, 1736, 2075, 2429, 2534, 3524
BfmI CTRYAG 6 cut(s) 99, 814, 1512, 2082, 2265, 3606
BfoI RGCGCY 1 cut(s) 3187
BfuI GTATCC 2 cut(s) 88, 418
BlnI CCTAGG 1 cut(s) 2074
BlpI GCTNAGC 2 cut(s) 1404, 1731
Bme1390I CCNGG 5 cut(s) 170, 1316, 2036, 2467, 2918
Bme18I GGWCC 1 cut(s) 1721
BmeT110I CYCGRG 1 cut(s) 2359
BmgT120I GGNCC 3 cut(s) 1492, 1721, 2708
BmiI GGNNCC 5 cut(s) 1320, 1493, 1746, 3288, 3507
BmrFI CCNGG 5 cut(s) 170, 1316, 2036, 2467, 2918
BmrI ACTGGG 2 cut(s) 405, 2057
BmuI ACTGGG 2 cut(s) 405, 2057
BoxI GACNNNNGTC 2 cut(s) 1637, 1961
BpiI GAAGAC 1 cut(s) 1056
BpmI CTGGAG 1 cut(s) 327
Bpu1102I GCTNAGC 2 cut(s) 1404, 1731
BpuEI CTTGAG 1 cut(s) 1678
BpuMI CCSGG 2 cut(s) 2467, 2918
BsaBI GATNNNNATC 1 cut(s) 3713
BsaHI GRCGYC 3 cut(s) 529, 611, 2032
BsaJI CCNNGG 9 cut(s) 51, 168, 519, 616, 1123, 2074, 2622, 2916, 3115
BsaWI WCCGGW 5 cut(s) 575, 1105, 1958, 2970, 3002
BsaXI ACNNNNNCTCC 6 cut(s) 489, 519, 633, 663, 713, 743
Bsc4I CCNNNNNNNGG 6 cut(s) 525, 1235, 2120, 2409, 2534, 3203
Bse118I RCCGGY 3 cut(s) 46, 911, 1958
Bse1I ACTGG 7 cut(s) 310, 400, 475, 2063, 2136, 3537, 3585
Bse21I CCTNAGG 1 cut(s) 1443
Bse3DI GCAATG 4 cut(s) 453, 1683, 3321, 3678
Bse8I GATNNNNATC 1 cut(s) 3713
BseAI TCCGGA 1 cut(s) 3002
BseBI CCWGG 3 cut(s) 170, 1316, 2036
BseDI CCNNGG 9 cut(s) 51, 168, 519, 616, 1123, 2074, 2622, 2916, 3115
BseJI GATNNNNATC 1 cut(s) 3713
BseLI CCNNNNNNNGG 6 cut(s) 525, 1235, 2120, 2409, 2534, 3203
BseMI GCAATG 4 cut(s) 453, 1683, 3321, 3678
BseMII CTCAG 6 cut(s) 1395, 1457, 1493, 1578, 1722, 3342
BseNI ACTGG 7 cut(s) 310, 400, 475, 2063, 2136, 3537, 3585
BseSI GKGCMC 2 cut(s) 1948, 2013
BseYI CCCAGC 2 cut(s) 2270, 2807
BsgI GTGCAG 1 cut(s) 3666
Bsh1285I CGRYCG 1 cut(s) 1197
BshFI GGCC 5 cut(s) 50, 1305, 1494, 1831, 2709
BshNI GGYRCC 1 cut(s) 3505
BshTI ACCGGT 1 cut(s) 1958
BsiEI CGRYCG 1 cut(s) 1197
BsiHKAI GWGCWC 7 cut(s) 435, 1573, 1664, 1948, 2013, 2942, 3544
BsiHKCI CYCGRG 1 cut(s) 2359
BslFI GGGAC 1 cut(s) 598
BslI CCNNNNNNNGG 6 cut(s) 525, 1235, 2120, 2409, 2534, 3203
BsmAI GTCTC 8 cut(s) 307, 536, 986, 1056, 2026, 2232, 2901, 3253
BsmBI CGTCTC 1 cut(s) 536
BsmFI GGGAC 1 cut(s) 598
BsmI GAATGC 2 cut(s) 1678, 1813
BsnI GGCC 5 cut(s) 50, 1305, 1494, 1831, 2709
BsoBI CYCGRG 1 cut(s) 2359
Bsp1286I GDGCHC 9 cut(s) 435, 1573, 1664, 1948, 2013, 2815, 2942, 3291, 3544
Bsp13I TCCGGA 1 cut(s) 3002
Bsp1720I GCTNAGC 2 cut(s) 1404, 1731
Bsp19I CCATGG 3 cut(s) 51, 1123, 3115
BspACI CCGC 5 cut(s) 843, 1654, 1912, 1915, 2946
BspANI GGCC 5 cut(s) 50, 1305, 1494, 1831, 2709
BspCNI CTCAG 6 cut(s) 1396, 1456, 1492, 1579, 1723, 3343
BspEI TCCGGA 1 cut(s) 3002
BspHI TCATGA 4 cut(s) 585, 885, 1822, 2442
BspLI GGNNCC 5 cut(s) 1320, 1493, 1746, 3288, 3507
BspMAI CTGCAG 2 cut(s) 103, 818
BspPI GGATC 9 cut(s) 676, 1295, 1739, 1752, 1894, 3102, 3188, 3591, 3606
BspQI GCTCTTC 1 cut(s) 155
BspT107I GGYRCC 1 cut(s) 3505
BsrDI GCAATG 4 cut(s) 453, 1683, 3321, 3678
BsrFI RCCGGY 3 cut(s) 46, 911, 1958
BsrI ACTGG 7 cut(s) 310, 400, 475, 2063, 2136, 3537, 3585
BssAI RCCGGY 3 cut(s) 46, 911, 1958
BssECI CCNNGG 9 cut(s) 51, 168, 519, 616, 1123, 2074, 2622, 2916, 3115
BssNI GRCGYC 3 cut(s) 529, 611, 2032
BssT1I CCWWGG 5 cut(s) 51, 519, 1123, 2074, 3115
Bst2UI CCWGG 3 cut(s) 170, 1316, 2036
Bst6I CTCTTC 2 cut(s) 155, 1891
BstACI GRCGYC 3 cut(s) 529, 611, 2032
BstAPI GCANNNNNTGC 4 cut(s) 959, 1160, 1568, 2375
BstC8I GCNNGC 9 cut(s) 48, 103, 708, 933, 1410, 1766, 2611, 2794, 2830
BstDSI CCRYGG 5 cut(s) 51, 616, 1123, 2622, 3115
BstEII GGTNACC 1 cut(s) 2104
BstENI CCTNNNNNAGG 1 cut(s) 3201
BstH2I RGCGCY 1 cut(s) 3187
BstHHI GCGC 3 cut(s) 1376, 1651, 3186
BstMAI GTCTC 8 cut(s) 307, 536, 986, 1056, 2026, 2232, 2901, 3253
BstMCI CGRYCG 1 cut(s) 1197
BstNI CCWGG 3 cut(s) 170, 1316, 2036
BstNSI RCATGY 3 cut(s) 1730, 2796, 3755
BstPAI GACNNNNGTC 2 cut(s) 1637, 1961
BstPI GGTNACC 1 cut(s) 2104
BstSCI CCNGG 5 cut(s) 168, 1314, 2034, 2465, 2916
BstSFI CTRYAG 6 cut(s) 99, 814, 1512, 2082, 2265, 3606
BstSLI GKGCMC 2 cut(s) 1948, 2013
BstV2I GAAGAC 1 cut(s) 1056
BstX2I RGATCY 3 cut(s) 668, 1744, 3094
BstYI RGATCY 3 cut(s) 668, 1744, 3094
Bsu36I CCTNAGG 1 cut(s) 1443
BsuI GTATCC 2 cut(s) 88, 418
BsuRI GGCC 5 cut(s) 50, 1305, 1494, 1831, 2709
BtgI CCRYGG 5 cut(s) 51, 616, 1123, 2622, 3115
BtsI GCAGTG 3 cut(s) 1695, 1798, 3666
Cac8I GCNNGC 9 cut(s) 48, 103, 708, 933, 1410, 1766, 2611, 2794, 2830
CaiI CAGNNNCTG 1 cut(s) 1586
CciI TCATGA 4 cut(s) 585, 885, 1822, 2442
CfoI GCGC 3 cut(s) 1376, 1651, 3186
Cfr10I RCCGGY 3 cut(s) 46, 911, 1958
Cfr13I GGNCC 3 cut(s) 1492, 1721, 2708
CseI GACGC 3 cut(s) 518, 600, 2040
Csp6I GTAC 7 cut(s) 134, 195, 721, 2079, 2689, 3225, 3759
CspAI ACCGGT 1 cut(s) 1958
CviQI GTAC 7 cut(s) 134, 195, 721, 2079, 2689, 3225, 3759
DraI TTTAAA 1 cut(s) 1530
DraIII CACNNNGTG 1 cut(s) 1943
EaeI YGGCCR 1 cut(s) 48
Eam1104I CTCTTC 2 cut(s) 155, 1891
EarI CTCTTC 2 cut(s) 155, 1891
EciI GGCGGA 1 cut(s) 858
Ecl136II GAGCTC 1 cut(s) 2940
Eco130I CCWWGG 5 cut(s) 51, 519, 1123, 2074, 3115
Eco147I AGGCCT 1 cut(s) 1305
Eco24I GRGCYC 3 cut(s) 2815, 2942, 3291
Eco47I GGWCC 1 cut(s) 1721
Eco47III AGCGCT 1 cut(s) 3185
Eco53kI GAGCTC 1 cut(s) 2940
Eco57I CTGAAG 3 cut(s) 1404, 1977, 2688
Eco81I CCTNAGG 1 cut(s) 1443
Eco88I CYCGRG 1 cut(s) 2359
Eco91I GGTNACC 1 cut(s) 2104
EcoICRI GAGCTC 1 cut(s) 2940
EcoNI CCTNNNNNAGG 1 cut(s) 3201
EcoO109I RGGNCCY 1 cut(s) 2708
EcoO65I GGTNACC 1 cut(s) 2104
EcoRII CCWGG 3 cut(s) 168, 1314, 2034
EcoT14I CCWWGG 5 cut(s) 51, 519, 1123, 2074, 3115
EcoT22I ATGCAT 1 cut(s) 2794
EcoT38I GRGCYC 3 cut(s) 2815, 2942, 3291
ErhI CCWWGG 5 cut(s) 51, 519, 1123, 2074, 3115
Esp3I CGTCTC 1 cut(s) 536
FalI AAGNNNNNCTT 4 cut(s) 2010, 2042, 2138, 2170
FaqI GGGAC 1 cut(s) 598
FauNDI CATATG 1 cut(s) 3328
FbaI TGATCA 8 cut(s) 7, 243, 258, 300, 1819, 2353, 2679, 3708
FblI GTMKAC 1 cut(s) 3161
FriOI GRGCYC 3 cut(s) 2815, 2942, 3291
FspBI CTAG 7 cut(s) 1146, 1451, 1736, 2075, 2429, 2534, 3524
GlaI GCGC 3 cut(s) 1375, 1650, 3185
GsaI CCCAGC 2 cut(s) 2274, 2811
GsuI CTGGAG 1 cut(s) 327
HaeII RGCGCY 1 cut(s) 3187
HaeIII GGCC 5 cut(s) 50, 1305, 1494, 1831, 2709
HgaI GACGC 3 cut(s) 518, 600, 2040
HhaI GCGC 3 cut(s) 1376, 1651, 3186
Hin1I GRCGYC 3 cut(s) 529, 611, 2032
Hin6I GCGC 3 cut(s) 1374, 1649, 3184
HinP1I GCGC 3 cut(s) 1374, 1649, 3184
HincII GTYRAC 1 cut(s) 3162
HindII GTYRAC 1 cut(s) 3162
HindIII AAGCTT 1 cut(s) 741
HphI GGTGA 9 cut(s) 268, 526, 1250, 1478, 2033, 2689, 3289, 3449, 3676
HpyAV CCTTC 8 cut(s) 1360, 1872, 2161, 2308, 2699, 3019, 3332, 3496
HpyCH4IV ACGT 1 cut(s) 366
HpySE526I ACGT 1 cut(s) 366
Hsp92I GRCGYC 3 cut(s) 529, 611, 2032
HspAI GCGC 3 cut(s) 1374, 1649, 3184
Kpn2I TCCGGA 1 cut(s) 3002
KroI GCCGGC 1 cut(s) 46
KroNI GCCGGC 1 cut(s) 48
Ksp22I TGATCA 8 cut(s) 7, 243, 258, 300, 1819, 2353, 2679, 3708
LguI GCTCTTC 1 cut(s) 155
LmnI GCTCC 2 cut(s) 641, 3286
MaeI CTAG 7 cut(s) 1146, 1451, 1736, 2075, 2429, 2534, 3524
MaeII ACGT 1 cut(s) 366
MaeIII GTNAC 3 cut(s) 1907, 1954, 2104
MboII GAAGA 9 cut(s) 26, 142, 1061, 1397, 1538, 1833, 1908, 2615, 2681
MfeI CAATTG 4 cut(s) 663, 1707, 2370, 2460
MflI RGATCY 3 cut(s) 668, 1744, 3094
MhlI GDGCHC 9 cut(s) 435, 1573, 1664, 1948, 2013, 2815, 2942, 3291, 3544
MlyI GAGTC 4 cut(s) 2301, 2993, 3289, 3684
MmeI TCCRAC 5 cut(s) 619, 1150, 1610, 2398, 3118
Mph1103I ATGCAT 1 cut(s) 2794
MroI TCCGGA 1 cut(s) 3002
MroNI GCCGGC 1 cut(s) 46
MroXI GAANNNNTTC 2 cut(s) 1053, 2182
MslI CAYNNNNRTG 5 cut(s) 890, 940, 1688, 2361, 3431
MspA1I CMGCKG 1 cut(s) 1279
MspR9I CCNGG 5 cut(s) 170, 1316, 2036, 2467, 2918
MunI CAATTG 4 cut(s) 663, 1707, 2370, 2460
Mva1269I GAATGC 2 cut(s) 1678, 1813
MvaI CCWGG 3 cut(s) 170, 1316, 2036
NaeI GCCGGC 1 cut(s) 48
NciI CCSGG 2 cut(s) 2467, 2918
NcoI CCATGG 3 cut(s) 51, 1123, 3115
NdeI CATATG 1 cut(s) 3328
NgoMIV GCCGGC 1 cut(s) 46
NlaIV GGNNCC 5 cut(s) 1320, 1493, 1746, 3288, 3507
NmuCI GTSAC 1 cut(s) 1954
NsiI ATGCAT 1 cut(s) 2794
NspI RCATGY 3 cut(s) 1730, 2796, 3755
OliI CACNNNNGTG 2 cut(s) 2361, 3431
PaeI GCATGC 1 cut(s) 2796
PaeR7I CTCGAG 1 cut(s) 2359
PagI TCATGA 4 cut(s) 585, 885, 1822, 2442
PceI AGGCCT 1 cut(s) 1305
PciSI GCTCTTC 1 cut(s) 155
PctI GAATGC 2 cut(s) 1678, 1813
PdiI GCCGGC 1 cut(s) 48
PdmI GAANNNNTTC 2 cut(s) 1053, 2182
PflMI CCANNNNNTGG 2 cut(s) 525, 1235
PinAI ACCGGT 1 cut(s) 1958
PleI GAGTC 4 cut(s) 2300, 2993, 3288, 3683
PpsI GAGTC 4 cut(s) 2300, 2993, 3288, 3683
PshAI GACNNNNGTC 2 cut(s) 1637, 1961
PshBI ATTAAT 2 cut(s) 1260, 2201
PsiI TTATAA 2 cut(s) 1772, 2510
Psp124BI GAGCTC 1 cut(s) 2942
Psp6I CCWGG 3 cut(s) 168, 1314, 2034
PspEI GGTNACC 1 cut(s) 2104
PspFI CCCAGC 2 cut(s) 2270, 2807
PspGI CCWGG 3 cut(s) 168, 1314, 2034
PspN4I GGNNCC 5 cut(s) 1320, 1493, 1746, 3288, 3507
PspPI GGNCC 3 cut(s) 1492, 1721, 2708
PspXI VCTCGAGB 1 cut(s) 2359
PstI CTGCAG 2 cut(s) 103, 818
PstNI CAGNNNCTG 1 cut(s) 1586
PsuI RGATCY 3 cut(s) 668, 1744, 3094
PvuII CAGCTG 1 cut(s) 1279
RsaI GTAC 7 cut(s) 135, 196, 722, 2080, 2690, 3226, 3760
RsaNI GTAC 7 cut(s) 134, 195, 721, 2079, 2689, 3225, 3759
RseI CAYNNNNRTG 5 cut(s) 890, 940, 1688, 2361, 3431
SacI GAGCTC 1 cut(s) 2942
SalI GTCGAC 1 cut(s) 3160
SapI GCTCTTC 1 cut(s) 155
Sau96I GGNCC 3 cut(s) 1492, 1721, 2708
SchI GAGTC 4 cut(s) 2301, 2993, 3289, 3684
ScrFI CCNGG 5 cut(s) 170, 1316, 2036, 2467, 2918
SduI GDGCHC 9 cut(s) 435, 1573, 1664, 1948, 2013, 2815, 2942, 3291, 3544
SfcI CTRYAG 6 cut(s) 99, 814, 1512, 2082, 2265, 3606
Sfr274I CTCGAG 1 cut(s) 2359
SinI GGWCC 1 cut(s) 1721
SlaI CTCGAG 1 cut(s) 2359
SmiMI CAYNNNNRTG 5 cut(s) 890, 940, 1688, 2361, 3431
SmlI CTYRAG 2 cut(s) 1657, 2359
SmoI CTYRAG 2 cut(s) 1657, 2359
SphI GCATGC 1 cut(s) 2796
SseBI AGGCCT 1 cut(s) 1305
SsiI CCGC 5 cut(s) 843, 1654, 1912, 1915, 2946
SspI AATATT 3 cut(s) 1119, 1354, 2205
SspMI CTAG 7 cut(s) 1146, 1451, 1736, 2075, 2429, 2534, 3524
SstI GAGCTC 1 cut(s) 2942
StuI AGGCCT 1 cut(s) 1305
StyD4I CCNGG 5 cut(s) 168, 1314, 2034, 2465, 2916
StyI CCWWGG 5 cut(s) 51, 519, 1123, 2074, 3115
TaiI ACGT 1 cut(s) 369
TaqI TCGA 8 cut(s) 1193, 2360, 2559, 2815, 3161, 3586, 3601, 3717
TatI WGTACW 1 cut(s) 720
TauI GCSGC 2 cut(s) 1917, 2948
TseFI GTSAC 1 cut(s) 1954
Tsp45I GTSAC 1 cut(s) 1954
TspGWI ACGGA 3 cut(s) 398, 2285, 2639
Van91I CCANNNNNTGG 2 cut(s) 525, 1235
VneI GTGCAC 2 cut(s) 1944, 2009
VpaK11BI GGWCC 1 cut(s) 1721
VspI ATTAAT 2 cut(s) 1260, 2201
XagI CCTNNNNNAGG 1 cut(s) 3201
XapI RAATTY 2 cut(s) 1542, 1856
XceI RCATGY 3 cut(s) 1730, 2796, 3755
XcmI CCANNNNNNNNNTGG 1 cut(s) 2629
XhoI CTCGAG 1 cut(s) 2359
XmaJI CCTAGG 1 cut(s) 2074
XmiI GTMKAC 1 cut(s) 3161
XmnI GAANNNNTTC 2 cut(s) 1053, 2182
XspI CTAG 7 cut(s) 1146, 1451, 1736, 2075, 2429, 2534, 3524
Zsp2I ATGCAT 1 cut(s) 2794
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.