AT3G62150

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
23008653 .. 23014030
5378 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G62150.2

Sequence Viewer

Length: 3891 bp
ATGGATAGTGTAATAGAATCAGAGGAGGGCTTGAAGGTGGATTCACCAAACAGAGCAGACGCAGAGACTTCAAACTCTAAAATTCATGAAGAAGACGAAAAAGAACTTAAGACAGAGTCTGATCTGAAAGAAGAGAAGAAAAAAACAGAGAAGAACAAACAAGAAGAAGATGAGAAGACCAAAACTGTACCGTTTCACAAGCTGTTTGCCTTTGCAGATTCATTTGACATCATTTTGATGATCCTCGGAACAATAGGCGCGGTGGGTAACGGTCTTGGCTTCCCTATCATGACGATCCTCTTCGGAGATGTCATAGATGTGTTTGGACAAAACCAAAACAGTTCAGATGTTTCTGATAAGATCGCTAAGGTGGCTCTGAAATTTGTATACCTTGGGCTTGGAACTCTAGTGGCAGCTCTTCTCCAGGTTTCTGGTTGGATGATCTCTGGGGAGAGACAAGCTGGAAGAATAAGGAGTCTGTATCTGCAAACTATATTGAGACAAGACATTGCCTTCTTCGACGTCGAAACCAACACAGGAGAAGTTGTTGGAAGAATGTCAGGTGACACTGTGCTTATACAAGACGCCATGGGAGAGAAGGTTGGAAAGGCTATTCAATTGGTATCAACGTTTATTGGTGGATTTGTGATAGCTTTCACTGAAGGATGGCTTCTTACATTAGTCATGGTATCTTCAATTCCACTTCTAGTAATGTCTGGTGCAGCTCTAGCTATCGTCATTTCCAAAATGGCTTCCCGTGGACAAACTTCTTATGCGAAAGCTGCGGTTGTAGTTGAGCAAACAGTTGGGTCAATAAGAACGGTTGCATCGTTTACTGGAGAGAAACAAGCGATAAGCAATTACAATAAGCATCTTGTCTCTGCTTATAGAGCAGGGGTGTTTGAAGGAGCTTCCACAGGACTTGGACTTGGTACACTCAACATAGTCATCTTTTGCACTTATGCTTTAGCGGTTTGGTATGGTGGGAAGATGATATTGGAGAAAGGATACACTGGAGGACAAGTTCTCATCATCATCTTCGCGGTTTTAACCGGTTCCATGTCATTAGGACAAGCATCTCCTTGTTTAAGCGCGTTTGCAGCTGGTCAAGCTGCGGCATACAAAATGTTTGAAGCAATCAAAAGAAAGCCGGAGATTGATGCTTCCGATACAACTGGAAAAGTTCTTGACGATATTAGAGGAGACATTGAGCTTAATAATGTGAACTTTAGTTACCCGGCAAGACCAGAAGAGCAGATCTTTCGCGGGTTTTCACTCTCTATCTCGAGTGGTTCAACCGTGGCTCTAGTTGGGCAGAGCGGAAGTGGGAAGTCTACTGTTGTGAGTCTGATAGAGAGGTTTTATGATCCACAAAGCGGTGAAGTCCGAATAGATGGGATTAACCTTAAAGAGTTTCAGCTAAAGTGGATCAGAAGCAAGATAGGACTTGTGAGTCAAGAACCGGTTCTGTTCACTTCAAGCATAAAGGAAAACATCGCCTACGGGAAAGAAAATGCAACAGTCGAAGAGATTCGTAAGGCCACAGAGCTCGCAAACGCGTCTAAATTCATTGACAAGCTTCCTCAGGGTTTAGACACGATGGTTGGAGAACACGGAACTCAGCTTTCAGGTGGGCAAAAACAGAGGATTGCAGTAGCTAGAGCGATTCTGAAAGATCCAAGAATCTTGCTTTTAGATGAAGCAACAAGCGCACTTGATGCAGAGTCTGAGAGGATTGTTCAAGAAGCTCTTGACAGGATCATGGTTAACCGAACAACCGTCGTTGTCGCTCACAGATTGAGTACGGTGAGAAATGCAGACATGATTGCTGTGATTCATCAAGGCAAGATCGTAGAGAAAGGTTCTCACTCTGAGCTCCTAAGAGACCCGGAAGGAGCGTATTCTCAGCTCATACGTCTACAAGAAGATACTAAACAGACAGAAGATTCAACGGATGAGCAGAAACTATCAATGGAGTCCATGAAACGGTCTAGTTTAAGGAAGTCGTCACTAAGCCGGTCTTTAAGCAAAAGATCTTCTTCTTTCTCTATGTTTGGTTTTCCAGCAGGAATAGACACCAACAACGAAGCTATACCAGAGAAAGACATCAAGGTTTCTACTCCGATCAAAGAAAAGAAAGTCTCTTTCTTTAGAGTCGCTGCTCTAAACAAACCAGAGATTCCTATGCTTATACTCGGATCTATAGCCGCGGTCTTAAACGGAGTTATTCTTCCGATATTCGGGATTCTAATCTCAAGCGTGATCAAAGCATTTTTCAAACCACCTGAGCAGTTAAAATCCGATACAAGGTTTTGGGCAATCATCTTCATGCTTCTTGGTGTAGCTTCAATGGTGGTCTTCCCAGCACAAACGATCTTTTTTTCCATAGCCGGATGTAAACTAGTGCAGCGGATAAGATCAATGTGTTTTGAGAAAGTTGTTCGTATGGAAGTTGGATGGTTTGATGAGACTGAGAACTCAAGTGGTGCTATTGGAGCTAGGCTCTCTGCTGATGCAGCTACGGTCCGTGGTCTAGTTGGAGACGCATTGGCTCAAACGGTTCAGAATCTTGCGTCTGTAACCGCGGGTTTGGTCATAGCGTTTGTGGCGAGTTGGCAGTTAGCTTTCATTGTTCTCGCGATGCTTCCGCTAATCGGGCTTAATGGTTATATATACATGAAGTTCATGGTTGGCTTCAGTGCAGATGCAAAGAGAATGTATGAGGAAGCGAGCCAAGTAGCGAATGATGCGGTGGGGAGCATAAGAACGGTTGCTTCATTCTGTGCAGAGGAGAAAGTGATGAAAATGTATAAGAAGAAATGTGAAGGTCCTATGAGAACAGGAATACGTCAAGGCATAGTTAGTGGTATCGGTTTCGGTGTTTCTTTCTTCGTCCTCTTCTCTTCTTACGCCGCCAGTTTCTACGCGGGTGCAAGGCTTGTCGATGACGGGAAAACAACCTTTGATTCTGTTTTCAGGGTTTTCTTTGCTTTGACAATGGCGGCTGTAGCTATTTCTCAGTCAAGTTCATTGTCTCCTGATTCCAGCAAAGCTAGCAATGCGGCTGCATCGATCTTCGCGGTTATAGACAGAGAATCGAAGATTGATCCAAGTGATGAGTCTGGGAGAGTTCTTGATAATGTTAAAGGAGATATCGAACTTCGTCATATTAGTTTCAAATATCCTTCAAGACCAGATGTTCAGATCTTCCAAGATCTCTGTCTGTCTATTCGCGCTGGCAAGACAATAGCTTTGGTTGGAGAGAGCGGGAGCGGGAAATCGACAGTGATTGCGTTGCTACAGAGGTTTTACGACCCTGATTCTGGTCAGATCACTCTTGATGGAGTTGAGATAAAGACATTGCAGCTGAAATGGTTAAGGCAGCAAACCGGGCTTGTGAGCCAGGAACCGGTTTTGTTCAATGAAACGATTAGGGCAAACATTGCTTATGGTAAAGGAGGAGATGCTACTGAAACCGAAATAGTATCCGCAGCTGAGCTATCTAACGCTCATGGCTTCATCAGTGGACTACAACAGGGCTATGATACAATGGTGGGTGAAAGAGGAGTTCAATTATCAGGTGGGCAAAAGCAGAGAGTAGCCATAGCCAGAGCAATCGTTAAAGACCCTAAAGTGTTGCTACTTGATGAAGCCACAAGTGCTCTAGACGCTGAGTCAGAGCGTGTGGTTCAGGATGCATTGGACCGGGTTATGGTTAACCGAACCACCGTGGTGGTGGCACATCGGTTATCAACAATCAAGAACGCCGATGTAATTGCAGTGGTTAAGAATGGAGTCATCGTGGAGAAGGGAAAGCATGAGACTTTGATTAATATCAAAGATGGTGTTTATGCTTCTTTAGTACAACTTCATCTGAGTGCTTCTACATAA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

1296

Amino Acids

140.33

Weight (kDa)

6.43

Isoelectric Point (pI)

36.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 80 - 354 2.4e-57 ABC transporter transmembrane region
ABC_tran PF00005 422 - 570 1.4e-33 ABC transporter
ABC_membrane PF00664 730 - 1002 5.6e-59 ABC transporter transmembrane region
ABC_tran PF00005 1071 - 1220 1.3e-33 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1452
AatII GACGTC 1 cut(s) 525
AccBSI CCGCTC 3 cut(s) 1320, 3267, 3273
AccI GTMKAC 3 cut(s) 387, 1334, 1918
AclI AACGTT 1 cut(s) 629
AclWI GGATC 8 cut(s) 235, 289, 1361, 1436, 1670, 1766, 2206, 3101
AcsI RAATTY 3 cut(s) 81, 380, 1565
AcuI CTGAAG 2 cut(s) 681, 2680
AcyI GRCGYC 2 cut(s) 522, 585
AfaI GTAC 4 cut(s) 189, 934, 1804, 3864
AfiI CCNNNNNNNGG 8 cut(s) 1376, 1986, 2240, 2307, 2654, 3323, 3409, 3712
AflII CTTAAG 1 cut(s) 107
AflIII ACRYGT 1 cut(s) 1557
AgeI ACCGGT 3 cut(s) 1052, 1462, 3409
AhdI GACNNNNNGTC 1 cut(s) 3673
AhlI ACTAGT 1 cut(s) 2401
AjnI CCWGG 2 cut(s) 423, 3402
AjuI GAANNNNNNNTTGG 2 cut(s) 980, 1012
AleI CACNNNNGTG 1 cut(s) 3731
AloI GAACNNNNNNTCC 2 cut(s) 1008, 1040
Alw21I GWGCWC 3 cut(s) 1551, 1878, 3664
AlwI GGATC 8 cut(s) 235, 289, 1361, 1436, 1670, 1766, 2206, 3101
AlwNI CAGNNNCTG 2 cut(s) 119, 1727
Ama87I CYCGRG 1 cut(s) 1285
AoxI GGCC 1 cut(s) 1539
ApoI RAATTY 3 cut(s) 81, 380, 1565
ArsI GACNNNNNNTTYG 2 cut(s) 3235, 3267
AseI ATTAAT 1 cut(s) 3831
AsiGI ACCGGT 3 cut(s) 1052, 1462, 3409
Asp700I GAANNNNTTC 2 cut(s) 1464, 1530
AspLEI GCGC 4 cut(s) 260, 1094, 1712, 3236
AspS9I GGNCC 3 cut(s) 2524, 2828, 3703
AsuC2I CCSGG 4 cut(s) 1238, 1889, 3391, 3707
AsuHPI GGTGA 5 cut(s) 36, 575, 1391, 1819, 3569
AsuNHI GCTAGC 1 cut(s) 3053
AvaI CYCGRG 1 cut(s) 1285
AvaII GGWCC 3 cut(s) 2524, 2828, 3703
AxyI CCTNAGG 1 cut(s) 1584
BaeI ACNNNNGTAYC 2 cut(s) 3537, 3570
BanII GRGCYC 2 cut(s) 1551, 1878
BbsI GAAGAC 3 cut(s) 99, 182, 2350
Bbv12I GWGCWC 3 cut(s) 1551, 1878, 3664
BccI CCATC 6 cut(s) 660, 1388, 1594, 2451, 3335, 3836
BcgI CGANNNNNNTGC 4 cut(s) 1244, 1278, 3758, 3792
BciT130I CCWGG 2 cut(s) 425, 3404
BciVI GTATCC 2 cut(s) 1001, 3496
BclI TGATCA 1 cut(s) 2262
BcnI CCSGG 4 cut(s) 1238, 1889, 3391, 3707
BcuI ACTAGT 1 cut(s) 2401
BfmI CTRYAG 3 cut(s) 2202, 3006, 3299
BfrI CTTAAG 1 cut(s) 107
BfuI GTATCC 2 cut(s) 1001, 3496
BglII AGATCT 4 cut(s) 1257, 2033, 3204, 3214
BlpI GCTNAGC 1 cut(s) 3495
Bme1390I CCNGG 6 cut(s) 425, 1238, 1889, 3391, 3404, 3707
Bme18I GGWCC 3 cut(s) 2524, 2828, 3703
BmeRI GACNNNNNGTC 1 cut(s) 3673
BmeT110I CYCGRG 1 cut(s) 1285
BmgT120I GGNCC 3 cut(s) 2524, 2828, 3703
BmiI GGNNCC 2 cut(s) 1057, 3408
BmrFI CCNGG 6 cut(s) 425, 1238, 1889, 3391, 3404, 3707
BmtI GCTAGC 1 cut(s) 3057
BpiI GAAGAC 3 cut(s) 99, 182, 2350
BplI GAGNNNNNCTC 2 cut(s) 2487, 2519
BpmI CTGGAG 3 cut(s) 407, 858, 1035
Bpu10I CCTNAGC 2 cut(s) 366, 2286
Bpu1102I GCTNAGC 1 cut(s) 3495
BpuEI CTTGAG 2 cut(s) 2239, 2464
BpuMI CCSGG 4 cut(s) 1238, 1889, 3391, 3707
Bsa29I ATCGAT 1 cut(s) 3071
BsaBI GATNNNNATC 2 cut(s) 2249, 3833
BsaHI GRCGYC 2 cut(s) 522, 585
BsaI GGTCTC 1 cut(s) 1878
BsaJI CCNNGG 9 cut(s) 244, 391, 588, 757, 1299, 2208, 2527, 2583, 3729
BsaWI WCCGGW 3 cut(s) 1052, 1462, 3409
BsaXI ACNNNNNCTCC 8 cut(s) 531, 561, 585, 615, 1008, 1038, 3786, 3816
Bsc4I CCNNNNNNNGG 8 cut(s) 1376, 1986, 2240, 2307, 2654, 3323, 3409, 3712
Bse118I RCCGGY 4 cut(s) 1052, 1462, 2016, 3409
Bse1I ACTGG 4 cut(s) 841, 1018, 1180, 2916
Bse21I CCTNAGG 1 cut(s) 1584
Bse3DI GCAATG 4 cut(s) 507, 3064, 3359, 3441
Bse8I GATNNNNATC 2 cut(s) 2249, 3833
BseBI CCWGG 2 cut(s) 425, 3404
BseCI ATCGAT 1 cut(s) 3071
BseDI CCNNGG 9 cut(s) 244, 391, 588, 757, 1299, 2208, 2527, 2583, 3729
BseGI GGATG 6 cut(s) 444, 671, 1960, 2399, 2462, 3700
BseJI GATNNNNATC 2 cut(s) 2249, 3833
BseLI CCNNNNNNNGG 8 cut(s) 1376, 1986, 2240, 2307, 2654, 3323, 3409, 3712
BseMI GCAATG 4 cut(s) 507, 3064, 3359, 3441
BseNI ACTGG 4 cut(s) 841, 1018, 1180, 2916
BseRI GAGGAG 5 cut(s) 38, 1215, 2804, 3474, 3579
BseYI CCCAGC 1 cut(s) 2362
BsgI GTGCAG 4 cut(s) 741, 2426, 2721, 2805
BshFI GGCC 1 cut(s) 1541
BshTI ACCGGT 3 cut(s) 1052, 1462, 3409
BshVI ATCGAT 1 cut(s) 3071
BsiHKAI GWGCWC 3 cut(s) 1551, 1878, 3664
BsiHKCI CYCGRG 1 cut(s) 1285
BslI CCNNNNNNNGG 8 cut(s) 1376, 1986, 2240, 2307, 2654, 3323, 3409, 3712
BsmBI CGTCTC 1 cut(s) 2535
BsnI GGCC 1 cut(s) 1541
Bso31I GGTCTC 1 cut(s) 1878
BsoBI CYCGRG 1 cut(s) 1285
Bsp1286I GDGCHC 3 cut(s) 1551, 1878, 3664
Bsp1720I GCTNAGC 1 cut(s) 3495
Bsp19I CCATGG 1 cut(s) 588
Bsp68I TCGCGA 1 cut(s) 2639
BspANI GGCC 1 cut(s) 1541
BspDI ATCGAT 1 cut(s) 3071
BspHI TCATGA 2 cut(s) 85, 288
BspLI GGNNCC 2 cut(s) 1057, 3408
BspOI GCTAGC 1 cut(s) 3057
BspPI GGATC 8 cut(s) 235, 289, 1361, 1436, 1670, 1766, 2206, 3101
BspQI GCTCTTC 2 cut(s) 423, 1245
BspTI CTTAAG 1 cut(s) 107
BspTNI GGTCTC 1 cut(s) 1878
BsrBI CCGCTC 3 cut(s) 1320, 3267, 3273
BsrDI GCAATG 4 cut(s) 507, 3064, 3359, 3441
BsrFI RCCGGY 4 cut(s) 1052, 1462, 2016, 3409
BsrI ACTGG 4 cut(s) 841, 1018, 1180, 2916
BssAI RCCGGY 4 cut(s) 1052, 1462, 2016, 3409
BssECI CCNNGG 9 cut(s) 244, 391, 588, 757, 1299, 2208, 2527, 2583, 3729
BssNAI GTATAC 1 cut(s) 388
BssNI GRCGYC 2 cut(s) 522, 585
BssT1I CCWWGG 2 cut(s) 391, 588
Bst1107I GTATAC 1 cut(s) 388
Bst2UI CCWGG 2 cut(s) 425, 3404
Bst6I CTCTTC 7 cut(s) 126, 305, 423, 1245, 1521, 2903, 2908
BstACI GRCGYC 2 cut(s) 522, 585
BstAFI CTTAAG 1 cut(s) 107
BstAPI GCANNNNNTGC 2 cut(s) 1718, 3443
BstC8I GCNNGC 4 cut(s) 1551, 2731, 3055, 3238
BstDSI CCRYGG 7 cut(s) 588, 757, 1299, 2208, 2527, 2583, 3729
BstF5I GGATG 6 cut(s) 444, 671, 1960, 2399, 2462, 3700
BstHHI GCGC 4 cut(s) 260, 1094, 1712, 3236
BstNI CCWGG 2 cut(s) 425, 3404
BstSCI CCNGG 6 cut(s) 423, 1236, 1887, 3389, 3402, 3705
BstSFI CTRYAG 3 cut(s) 2202, 3006, 3299
BstV2I GAAGAC 3 cut(s) 99, 182, 2350
BstX2I RGATCY 6 cut(s) 1257, 1675, 2033, 2198, 3204, 3214
BstXI CCANNNNNNTGG 2 cut(s) 431, 3733
BstYI RGATCY 6 cut(s) 1257, 1675, 2033, 2198, 3204, 3214
BstZ17I GTATAC 1 cut(s) 388
Bsu15I ATCGAT 1 cut(s) 3071
Bsu36I CCTNAGG 1 cut(s) 1584
BsuI GTATCC 2 cut(s) 1001, 3496
BsuRI GGCC 1 cut(s) 1541
BsuTUI ATCGAT 1 cut(s) 3071
BtgI CCRYGG 7 cut(s) 588, 757, 1299, 2208, 2527, 2583, 3729
BtgZI GCGATG 2 cut(s) 1480, 2654
BtsCI GGATG 6 cut(s) 444, 671, 1960, 2399, 2462, 3700
BtsI GCAGTG 1 cut(s) 3786
BtsIMutI CAGTG 7 cut(s) 567, 657, 1011, 2704, 3291, 3529, 3786
BtuMI TCGCGA 1 cut(s) 2639
Cac8I GCNNGC 4 cut(s) 1551, 2731, 3055, 3238
CaiI CAGNNNCTG 2 cut(s) 119, 1727
CciI TCATGA 2 cut(s) 85, 288
CfoI GCGC 4 cut(s) 260, 1094, 1712, 3236
Cfr10I RCCGGY 4 cut(s) 1052, 1462, 2016, 3409
Cfr13I GGNCC 3 cut(s) 2524, 2828, 3703
Cfr42I CCGCGG 2 cut(s) 2211, 2586
ClaI ATCGAT 1 cut(s) 3071
CpoI CGGWCCG 1 cut(s) 2524
CseI GACGC 6 cut(s) 68, 593, 1548, 2552, 2562, 3677
Csp6I GTAC 4 cut(s) 188, 933, 1803, 3863
CspAI ACCGGT 3 cut(s) 1052, 1462, 3409
CspCI CAANNNNNGTGG 2 cut(s) 904, 939
CspI CGGWCCG 1 cut(s) 2524
CviQI GTAC 4 cut(s) 188, 933, 1803, 3863
DrdI GACNNNNNNGTC 1 cut(s) 1452
DriI GACNNNNNGTC 1 cut(s) 3673
DseDI GACNNNNNNGTC 1 cut(s) 1452
Eam1104I CTCTTC 7 cut(s) 126, 305, 423, 1245, 1521, 2903, 2908
Eam1105I GACNNNNNGTC 1 cut(s) 3673
EarI CTCTTC 7 cut(s) 126, 305, 423, 1245, 1521, 2903, 2908
Ecl136II GAGCTC 2 cut(s) 1549, 1876
Eco130I CCWWGG 2 cut(s) 391, 588
Eco24I GRGCYC 2 cut(s) 1551, 1878
Eco31I GGTCTC 1 cut(s) 1878
Eco32I GATATC 1 cut(s) 3154
Eco47I GGWCC 3 cut(s) 2524, 2828, 3703
Eco53kI GAGCTC 2 cut(s) 1549, 1876
Eco57I CTGAAG 2 cut(s) 681, 2680
Eco81I CCTNAGG 1 cut(s) 1584
Eco88I CYCGRG 1 cut(s) 1285
EcoICRI GAGCTC 2 cut(s) 1549, 1876
EcoO109I RGGNCCY 1 cut(s) 2828
EcoRII CCWGG 2 cut(s) 423, 3402
EcoRV GATATC 1 cut(s) 3154
EcoT14I CCWWGG 2 cut(s) 391, 588
EcoT22I ATGCAT 1 cut(s) 3700
EcoT38I GRGCYC 2 cut(s) 1551, 1878
ErhI CCWWGG 2 cut(s) 391, 588
Esp3I CGTCTC 1 cut(s) 2535
FalI AAGNNNNNCTT 8 cut(s) 654, 686, 1734, 1766, 2005, 2037, 2023, 2055
FauI CCCGC 5 cut(s) 1259, 2578, 2920, 3260, 3266
FbaI TGATCA 1 cut(s) 2262
FblI GTMKAC 3 cut(s) 387, 1334, 1918
FokI GGATG 6 cut(s) 451, 678, 1967, 2406, 2469, 3707
FriOI GRGCYC 2 cut(s) 1551, 1878
GlaI GCGC 4 cut(s) 259, 1093, 1711, 3235
GsaI CCCAGC 1 cut(s) 2366
GsuI CTGGAG 3 cut(s) 407, 858, 1035
HaeIII GGCC 1 cut(s) 1541
HgaI GACGC 6 cut(s) 68, 593, 1548, 2552, 2562, 3677
HhaI GCGC 4 cut(s) 260, 1094, 1712, 3236
Hin1I GRCGYC 2 cut(s) 522, 585
Hin6I GCGC 4 cut(s) 258, 1092, 1710, 3234
HinP1I GCGC 4 cut(s) 258, 1092, 1710, 3234
HincII GTYRAC 2 cut(s) 1768, 3718
HindII GTYRAC 2 cut(s) 1768, 3718
HindIII AAGCTT 1 cut(s) 1577
HpaI GTTAAC 2 cut(s) 1768, 3718
HphI GGTGA 5 cut(s) 36, 575, 1391, 1819, 3569
Hpy99I CGWCG 3 cut(s) 524, 527, 1784
HpyAV CCTTC 9 cut(s) 28, 523, 592, 656, 899, 1886, 2819, 3195, 3802
HpyCH4IV ACGT 4 cut(s) 522, 629, 1915, 2848
HpySE526I ACGT 4 cut(s) 522, 629, 1915, 2848
Hsp92I GRCGYC 2 cut(s) 522, 585
HspAI GCGC 4 cut(s) 258, 1092, 1710, 3234
Ksp22I TGATCA 1 cut(s) 2262
KspAI GTTAAC 2 cut(s) 1768, 3718
KspI CCGCGG 2 cut(s) 2211, 2586
LguI GCTCTTC 2 cut(s) 423, 1245
LmnI GCTCC 6 cut(s) 908, 1881, 1895, 2495, 2757, 3270
MaeII ACGT 4 cut(s) 522, 629, 1915, 2848
MaeIII GTNAC 5 cut(s) 266, 563, 1232, 2007, 2578
MbiI CCGCTC 3 cut(s) 1320, 3267, 3273
MfeI CAATTG 1 cut(s) 617
MflI RGATCY 6 cut(s) 1257, 1675, 2033, 2198, 3204, 3214
MhlI GDGCHC 3 cut(s) 1551, 1878, 3664
MluCI AATT 8 cut(s) 81, 380, 617, 696, 859, 1565, 3572, 3774
MluI ACGCGT 1 cut(s) 1557
MmeI TCCRAC 7 cut(s) 416, 529, 583, 1585, 2434, 2518, 3238
Mph1103I ATGCAT 1 cut(s) 3700
MroXI GAANNNNTTC 2 cut(s) 1464, 1530
MslI CAYNNNNRTG 5 cut(s) 236, 317, 2327, 3731, 3876
MspA1I CMGCKG 6 cut(s) 1103, 2210, 2410, 2585, 3367, 3494
MspCI CTTAAG 1 cut(s) 107
MspR9I CCNGG 6 cut(s) 425, 1238, 1889, 3391, 3404, 3707
MunI CAATTG 1 cut(s) 617
MvaI CCWGG 2 cut(s) 425, 3404
NciI CCSGG 4 cut(s) 1238, 1889, 3391, 3707
NcoI CCATGG 1 cut(s) 588
NheI GCTAGC 1 cut(s) 3053
NlaIV GGNNCC 2 cut(s) 1057, 3408
NmuCI GTSAC 2 cut(s) 563, 2007
NruI TCGCGA 1 cut(s) 2639
NsiI ATGCAT 1 cut(s) 3700
OliI CACNNNNGTG 1 cut(s) 3731
PaeR7I CTCGAG 1 cut(s) 1285
PagI TCATGA 2 cut(s) 85, 288
PciSI GCTCTTC 2 cut(s) 423, 1245
PcsI WCGNNNNNNNCGW 1 cut(s) 827
PdmI GAANNNNTTC 2 cut(s) 1464, 1530
PflFI GACNNNGTC 1 cut(s) 115
PinAI ACCGGT 3 cut(s) 1052, 1462, 3409
PpuMI RGGWCCY 1 cut(s) 2828
PshBI ATTAAT 1 cut(s) 3831
Psp124BI GAGCTC 2 cut(s) 1551, 1878
Psp1406I AACGTT 1 cut(s) 629
Psp5II RGGWCCY 1 cut(s) 2828
Psp6I CCWGG 2 cut(s) 423, 3402
PspFI CCCAGC 1 cut(s) 2362
PspGI CCWGG 2 cut(s) 423, 3402
PspN4I GGNNCC 2 cut(s) 1057, 3408
PspPI GGNCC 3 cut(s) 2524, 2828, 3703
PspPPI RGGWCCY 1 cut(s) 2828
PsrI GAACNNNNNNTAC 2 cut(s) 1217, 1249
PstNI CAGNNNCTG 2 cut(s) 119, 1727
PsuI RGATCY 6 cut(s) 1257, 1675, 2033, 2198, 3204, 3214
PsyI GACNNNGTC 1 cut(s) 115
PvuII CAGCTG 3 cut(s) 1103, 3367, 3494
RruI TCGCGA 1 cut(s) 2639
RsaI GTAC 4 cut(s) 189, 934, 1804, 3864
RsaNI GTAC 4 cut(s) 188, 933, 1803, 3863
RseI CAYNNNNRTG 5 cut(s) 236, 317, 2327, 3731, 3876
Rsr2I CGGWCCG 1 cut(s) 2524
RsrII CGGWCCG 1 cut(s) 2524
SacI GAGCTC 2 cut(s) 1551, 1878
SacII CCGCGG 2 cut(s) 2211, 2586
SapI GCTCTTC 2 cut(s) 423, 1245
Sau96I GGNCC 3 cut(s) 2524, 2828, 3703
ScrFI CCNGG 6 cut(s) 425, 1238, 1889, 3391, 3404, 3707
SduI GDGCHC 3 cut(s) 1551, 1878, 3664
SfcI CTRYAG 3 cut(s) 2202, 3006, 3299
Sfr274I CTCGAG 1 cut(s) 1285
Sfr303I CCGCGG 2 cut(s) 2211, 2586
SgrBI CCGCGG 2 cut(s) 2211, 2586
SinI GGWCC 3 cut(s) 2524, 2828, 3703
SlaI CTCGAG 1 cut(s) 1285
SmiMI CAYNNNNRTG 5 cut(s) 236, 317, 2327, 3731, 3876
SmlI CTYRAG 4 cut(s) 107, 1285, 2254, 2479
SmoI CTYRAG 4 cut(s) 107, 1285, 2254, 2479
SpeI ACTAGT 1 cut(s) 2401
Sse9I AATT 8 cut(s) 81, 380, 617, 696, 859, 1565, 3572, 3774
SstI GAGCTC 2 cut(s) 1551, 1878
StyD4I CCNGG 6 cut(s) 423, 1236, 1887, 3389, 3402, 3705
StyI CCWWGG 2 cut(s) 391, 588
TaiI ACGT 4 cut(s) 525, 632, 1918, 2851
TaqI TCGA 9 cut(s) 519, 525, 1286, 1524, 2943, 3071, 3098, 3156, 3281
TasI AATT 8 cut(s) 81, 380, 617, 696, 859, 1565, 3572, 3774
TatI WGTACW 1 cut(s) 3862
TauI GCSGC 5 cut(s) 1118, 2210, 2915, 3005, 3065
TscAI CASTG 7 cut(s) 574, 664, 1018, 2704, 3291, 3529, 3786
TseFI GTSAC 2 cut(s) 563, 2007
Tsp45I GTSAC 2 cut(s) 563, 2007
TspGWI ACGGA 4 cut(s) 1629, 1967, 2235, 2516
TspRI CASTG 7 cut(s) 574, 664, 1018, 2704, 3291, 3529, 3786
Tth111I GACNNNGTC 1 cut(s) 115
Vha464I CTTAAG 1 cut(s) 107
VpaK11BI GGWCC 3 cut(s) 2524, 2828, 3703
VspI ATTAAT 1 cut(s) 3831
XapI RAATTY 3 cut(s) 81, 380, 1565
XbaI TCTAGA 1 cut(s) 3664
XcmI CCANNNNNNNNNTGG 1 cut(s) 3733
XhoI CTCGAG 1 cut(s) 1285
XmiI GTMKAC 3 cut(s) 387, 1334, 1918
XmnI GAANNNNTTC 2 cut(s) 1464, 1530
ZraI GACGTC 1 cut(s) 523
Zsp2I ATGCAT 1 cut(s) 3700
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.