Rorug04G0220100

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
37958971 .. 37968067
9097 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0220100.1

Sequence Viewer

Length: 2850 bp
ATGGATGTGGAGAGGTATGAACAGCGTGAGGAGAGATATGATCGGGTTGACTCTCCGGTGAGAGAGCAGCGGGAGGATGGGAATTCTGATGATTTAGAAGAGAATGGGAGCAGGCATAGGAGCAAGGATAGGAAGAAGAGTAGCCGAGGGGAAGAGAAGGATAGTAGAAGTAAAGACCGGGATAGGTCGAGGAGAAGTGGTGGTGATGATGTTGTCAAGGAAAGAGAGAAAGAATCTAAAGATTTGGAAAAGGATCGTGTGTCTAAGGAAAGGAGGAAGGATGATAGGGATGAGCGATATAAGGATAGGAGTAGAGATAACAAGGTGAGGGAGAGAGATTATGATCGAGAGAAGGAGCATGAGAGGGGGAAAGACAGAAAGGATCGAGGGAAGGATAGAGAGGGAGAGAAGGATGTTGATAAAGGACGAGACAAAGAGAGGGCGAAAGAGAAGATTAGGGATAGGGAAAAGGAAAGGGAAAGAGACAGGGCTAAAGAAAAAGAAAGAGAAAAGGAGAGAGAAAAGCATAAAGATCGAGAGAAGGGGAGGGAAAGCTTGAAGGATACAGATAGGGAGAAGGGGAAAGATAAATATAGGGAAAAGGAGAGGGAGGCAGATCAAGATAAGGAGAAATCAAGAGATAGACAGAGCAGGAGAAGCGTGGATGCTTATGAGTCGAGCAAGATTGGGGAAAGGGATGAGAGTGCTAAGCTTAATGATGACGATAACAGGGATAAGGACATTATTAAGCAAGGTAAGATGTCCCATAATGCTGCTTATGAACAAAATGCCGAGGGTTTGTCAGGTGGAGCACATCTATCAGCATCCGAGCTTGAGGAACGCATCCTGAAAACAAAGGAAGAGAGGTTAAAGAAGAAAACTGAAGACATTCCTGAGGTTTTAGCTTGGGTTAATAGGAGTCGTAAGCTCGAAGAGAAAAGGAATGCTGAAAAAGAGAAAGCTTTGCAGCTTTCAAAGATCTTTGAGGAACAGGACAATGTTGCCGAAGAAGAAAGTGAAGATGAGGAGGCAGCTCAGGATATGACTCATAATCTAGCTGGGGTTAAAGTTCTTCATGGCATTGATAAAGTGATGGACGGTGGCGCAGTTGTTTTAACACTCAAGGATCAGAACATTCTAGCTGATGGTGACATTAATGAAGATGTTGATATGCTTGAGAATGTGGAACTTGGTGAGCAGAAGCAGCGAGATGACGCTTACAAGGCAGCGAAGAAAAAAACAGGGATTTATGCTGATAAGTTTAACGATGATCCTACTTTAGAGAAGAAAATTCTTCCACAATATGATGATCCTGCTGCAGATGAGGGGCTAACACTAGATGCAGGAGGACGCTTTACTGGTGAAGCAGAGAAGAAACTTGAAGAGCTACGTATGAGGCTACAGGGTGGTTCCACGAAAAACTGCTCTGAAGATCTCAACATGTCTGGAAAGATCACATCTGACTACTATACAAATGAAGAAATGCTGCAATTTAAAAAGCCCAAGAAAAAGAAAACCTTCAGGAAGAAGGAGAAGCTAGATCTAGATGCCCTTGAAGCAGAAGCCGTATCTGCAGGGCTGGGTGCTGCGGACCTCGGTTCCAGGAAGGATGGAAAGAGGCAGGCCACTAGAGAGGAGCAAGAAAGATTAGAAGCTGAGAAGAGAAATAGTGCATACCAGTTAGCTAAAGCTAAAGCAAATGAGGCATCTAAAGCATTGCGACAGGACACTCAATCTGTTAAGGCAGAGGAAGATGAAACTCCTTACTTTGCTGATGATTATGATGAAATTGATAAAGCCTTGGAGAGATCAAGGAAAATAGCTCTACAAAAGAAACAGGAGGAGAAAGTCTCCGGTCCGAAGGCAATTGCTCGCCTTGCCACAGCAGCTGCAAGCAGCACAACTGCAGATGATCAATTCTCGTCAACTGGACAGTCACAGGAAAACAAGGTTGTGTTCACAGAGATGGAAGAATTTGTCTTGGGCCTACAGCTTGAAGAAGAATCCCACAAGCCTGAAAGTGAAGATGTGTTTATGCAAGAAGATGAAGAACCAAAAGCTTCTGTAGACGTAGAAATGGGCGAGCCTAGTGGATGGACTGAAGTTAATGAAATTGAAGAGAACAAAGCACAATCTGCTGCTGATGATAATGAGGAAATAGTTCCAGATGAAACTATCCATGAAGTTGCAGTTGGGAAAGGTTTATCAGGTGTGCTAAAACTGCTTAAAGAGCGAGGTAATCTCAAAGAAGGTATTGAATGGGGTGGTAGGAACATGGACAAGAAGAAAAGCAAACTTTTAGGCATCGTAGATGATGACGAGGAGCCAAAGGAGACCCATACAGTGCGTCGGAGAAAGGATGAACAAAAGGATACTCGTTCGTCAGGCCATCAAAAGGAGATGCGTCCTCCTAAAGTCTATCAGGAAAAGGATATTCACATTGAGAGAACTGACGAATTTGGTCGAACTTTGACACCAAAGGAGGCCTTTCGGGTACTTTCACATAAATTTCATGGGAAGGGGCCTGGAAAAATGAAGCAAGAAAAGCGCATGAAGCAATACCACGAAGAACTCAAGTTGAAGCAGATGAAGAGTTCAGATACACCATCCCTGTCTGTGGAGAGGATGAGGGAAACTCAAGCTCGGTTACAGACACCCTATCTTGTTCTCAGCGGCCATGTTAAACCAGGGCAAACTAGCGATCCCAGAAGTGGTTTTGCTACTGTGGAGAAGGATCTCCCAGGGGGCTTGACGCCTATGCTTGGTGACAGAAAGGTCGAACATTTTCTGGGGATAAAGCGCAAAGATGAAACTGAAAGTTCAGGCACGCCGAAGAAGCCAAAAACTTGA

Protein Analysis

949

Amino Acids

109.28

Weight (kDa)

5.68

Isoelectric Point (pI)

45.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SART-1 PF03343 296 - 857 6.2e-72 SART-1 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2774
AccI GTMKAC 1 cut(s) 2067
AciI CCGC 3 cut(s) 70, 1589, 2673
AclWI GGATC 7 cut(s) 261, 390, 1134, 1265, 1304, 2696, 2742
AcoI YGGCCR 1 cut(s) 2674
AcsI RAATTY 5 cut(s) 82, 1290, 1973, 2456, 2507
AcuI CTGAAG 4 cut(s) 903, 1449, 1504, 2121
AcyI GRCGYC 1 cut(s) 2753
AfaI GTAC 1 cut(s) 2496
AfiI CCNNNNNNNGG 4 cut(s) 2395, 2617, 2711, 2762
AflIII ACRYGT 1 cut(s) 1440
AgsI TTSAA 8 cut(s) 559, 975, 1382, 1556, 1997, 2117, 2258, 2581
AjnI CCWGG 4 cut(s) 1601, 2524, 2686, 2740
AjuI GAANNNNNNNTTGG 2 cut(s) 2175, 2207
Alw21I GWGCWC 1 cut(s) 814
Alw26I GTCTC 4 cut(s) 423, 477, 1855, 2327
AlwI GGATC 7 cut(s) 261, 390, 1134, 1265, 1304, 2696, 2742
AlwNI CAGNNNCTG 1 cut(s) 1889
AoxI GGCC 6 cut(s) 1623, 1984, 2386, 2484, 2522, 2674
ApoI RAATTY 5 cut(s) 82, 1290, 1973, 2456, 2507
AseI ATTAAT 1 cut(s) 1155
Asp700I GAANNNNTTC 4 cut(s) 888, 1517, 2160, 2784
AspLEI GCGC 3 cut(s) 1106, 2550, 2802
AspS9I GGNCC 4 cut(s) 1591, 1856, 1984, 2522
AsuC2I CCSGG 1 cut(s) 179
AsuHPI GGTGA 7 cut(s) 70, 215, 337, 1160, 1205, 1373, 2777
AvaII GGWCC 2 cut(s) 1591, 1856
AxyI CCTNAGG 1 cut(s) 894
BbsI GAAGAC 1 cut(s) 891
Bbv12I GWGCWC 1 cut(s) 814
BccI CCATC 8 cut(s) 71, 1087, 1139, 1604, 1960, 2088, 2397, 2614
BceAI ACGGC 1 cut(s) 1550
BcgI CGANNNNNNTGC 2 cut(s) 515, 549
BciT130I CCWGG 4 cut(s) 1603, 2526, 2688, 2742
BciVI GTATCC 2 cut(s) 556, 2365
BclI TGATCA 1 cut(s) 1912
BcnI CCSGG 1 cut(s) 179
BcoDI GTCTC 4 cut(s) 423, 477, 1855, 2327
BfaI CTAG 8 cut(s) 1055, 1139, 1337, 1538, 1544, 1629, 2088, 2697
BfmI CTRYAG 6 cut(s) 1317, 1400, 1572, 1905, 1988, 2064
BfuI GTATCC 2 cut(s) 556, 2365
BglII AGATCT 3 cut(s) 978, 1432, 1540
BlpI GCTNAGC 1 cut(s) 708
Bme1390I CCNGG 5 cut(s) 179, 1603, 2526, 2688, 2742
Bme18I GGWCC 2 cut(s) 1591, 1856
BmgT120I GGNCC 4 cut(s) 1591, 1856, 1984, 2522
BmiI GGNNCC 4 cut(s) 1411, 1600, 2325, 2523
BmrFI CCNGG 5 cut(s) 179, 1603, 2526, 2688, 2742
BmsI GCATC 8 cut(s) 655, 833, 852, 1330, 1537, 1715, 2313, 2391
BpiI GAAGAC 1 cut(s) 891
BplI GAGNNNNNCTC 6 cut(s) 1835, 1867, 2226, 2258, 2620, 2652
Bpu10I CCTNAGC 1 cut(s) 1035
Bpu1102I GCTNAGC 1 cut(s) 708
BpuEI CTTGAG 5 cut(s) 854, 1106, 1196, 2558, 2622
BpuMI CCSGG 1 cut(s) 179
BsaAI YACGTR 1 cut(s) 1391
BsaBI GATNNNNATC 1 cut(s) 342
BsaHI GRCGYC 1 cut(s) 2753
BsaI GGTCTC 1 cut(s) 2327
BsaJI CCNNGG 7 cut(s) 145, 792, 1594, 1800, 2687, 2740, 2741
BsaWI WCCGGW 2 cut(s) 55, 1853
BsaXI ACNNNNNCTCC 2 cut(s) 184, 214
Bsc4I CCNNNNNNNGG 4 cut(s) 2395, 2617, 2711, 2762
Bse1I ACTGG 3 cut(s) 1363, 1678, 1933
Bse21I CCTNAGG 1 cut(s) 894
Bse3DI GCAATG 1 cut(s) 1715
Bse8I GATNNNNATC 1 cut(s) 342
BseBI CCWGG 4 cut(s) 1603, 2526, 2688, 2742
BseDI CCNNGG 7 cut(s) 145, 792, 1594, 1800, 2687, 2740, 2741
BseJI GATNNNNATC 1 cut(s) 342
BseLI CCNNNNNNNGG 4 cut(s) 2395, 2617, 2711, 2762
BseMI GCAATG 1 cut(s) 1715
BseMII CTCAG 4 cut(s) 885, 1049, 1647, 2683
BseNI ACTGG 3 cut(s) 1363, 1678, 1933
BseRI GAGGAG 6 cut(s) 44, 205, 1040, 1649, 1856, 2336
BseYI CCCAGC 2 cut(s) 1058, 1579
BshFI GGCC 6 cut(s) 1625, 1986, 2388, 2486, 2524, 2676
BsiHKAI GWGCWC 1 cut(s) 814
BsiSI CCGG 3 cut(s) 56, 178, 1854
BslFI GGGAC 1 cut(s) 748
BslI CCNNNNNNNGG 4 cut(s) 2395, 2617, 2711, 2762
BsmAI GTCTC 4 cut(s) 423, 477, 1855, 2327
BsmFI GGGAC 1 cut(s) 748
BsmI GAATGC 1 cut(s) 949
BsnI GGCC 6 cut(s) 1625, 1986, 2388, 2486, 2524, 2676
Bso31I GGTCTC 1 cut(s) 2327
Bsp1286I GDGCHC 1 cut(s) 814
Bsp1720I GCTNAGC 1 cut(s) 708
BspACI CCGC 3 cut(s) 70, 1589, 2673
BspANI GGCC 6 cut(s) 1625, 1986, 2388, 2486, 2524, 2676
BspCNI CTCAG 4 cut(s) 886, 1048, 1648, 2682
BspLI GGNNCC 4 cut(s) 1411, 1600, 2325, 2523
BspMAI CTGCAG 3 cut(s) 1321, 1576, 1909
BspPI GGATC 7 cut(s) 261, 390, 1134, 1265, 1304, 2696, 2742
BspQI GCTCTTC 1 cut(s) 1377
BspTNI GGTCTC 1 cut(s) 2327
BsrDI GCAATG 1 cut(s) 1715
BsrI ACTGG 3 cut(s) 1363, 1678, 1933
BssECI CCNNGG 7 cut(s) 145, 792, 1594, 1800, 2687, 2740, 2741
BssNI GRCGYC 1 cut(s) 2753
BssT1I CCWWGG 1 cut(s) 1800
Bst2UI CCWGG 4 cut(s) 1603, 2526, 2688, 2742
Bst4CI ACNGT 4 cut(s) 1100, 1935, 2344, 2725
Bst6I CTCTTC 9 cut(s) 93, 131, 147, 855, 927, 1377, 1655, 2112, 2585
BstACI GRCGYC 1 cut(s) 2753
BstAPI GCANNNNNTGC 1 cut(s) 2135
BstBAI YACGTR 1 cut(s) 1391
BstC8I GCNNGC 6 cut(s) 113, 1623, 1873, 1894, 2084, 2828
BstDEI CTNAG 6 cut(s) 264, 708, 894, 1035, 1656, 2669
BstHHI GCGC 3 cut(s) 1106, 2550, 2802
BstMAI GTCTC 4 cut(s) 423, 477, 1855, 2327
BstNI CCWGG 4 cut(s) 1603, 2526, 2688, 2742
BstNSI RCATGY 1 cut(s) 1444
BstSCI CCNGG 5 cut(s) 177, 1601, 2524, 2686, 2740
BstSFI CTRYAG 6 cut(s) 1317, 1400, 1572, 1905, 1988, 2064
BstSNI TACGTA 1 cut(s) 1391
BstV2I GAAGAC 1 cut(s) 891
BstX2I RGATCY 4 cut(s) 978, 1432, 1540, 2734
BstYI RGATCY 4 cut(s) 978, 1432, 1540, 2734
Bsu36I CCTNAGG 1 cut(s) 894
BsuI GTATCC 2 cut(s) 556, 2365
BsuRI GGCC 6 cut(s) 1625, 1986, 2388, 2486, 2524, 2676
BtsIMutI CAGTG 1 cut(s) 2349
Cac8I GCNNGC 6 cut(s) 113, 1623, 1873, 1894, 2084, 2828
CaiI CAGNNNCTG 1 cut(s) 1889
CfoI GCGC 3 cut(s) 1106, 2550, 2802
Cfr13I GGNCC 4 cut(s) 1591, 1856, 1984, 2522
CpoI CGGWCCG 1 cut(s) 1856
CseI GACGC 5 cut(s) 1223, 1359, 2336, 2393, 2761
Csp6I GTAC 1 cut(s) 2495
CspI CGGWCCG 1 cut(s) 1856
CviAII CATG 8 cut(s) 359, 1076, 1441, 2180, 2275, 2513, 2551, 2678
CviQI GTAC 1 cut(s) 2495
DdeI CTNAG 6 cut(s) 264, 708, 894, 1035, 1656, 2669
DraI TTTAAA 1 cut(s) 1495
DrdI GACNNNNNNGTC 1 cut(s) 2774
DseDI GACNNNNNNGTC 1 cut(s) 2774
EaeI YGGCCR 1 cut(s) 2674
Eam1104I CTCTTC 9 cut(s) 93, 131, 147, 855, 927, 1377, 1655, 2112, 2585
EarI CTCTTC 9 cut(s) 93, 131, 147, 855, 927, 1377, 1655, 2112, 2585
Eco105I TACGTA 1 cut(s) 1391
Eco130I CCWWGG 1 cut(s) 1800
Eco147I AGGCCT 1 cut(s) 2486
Eco31I GGTCTC 1 cut(s) 2327
Eco47I GGWCC 2 cut(s) 1591, 1856
Eco57I CTGAAG 4 cut(s) 903, 1449, 1504, 2121
Eco81I CCTNAGG 1 cut(s) 894
EcoO109I RGGNCCY 1 cut(s) 2522
EcoRI GAATTC 1 cut(s) 82
EcoRII CCWGG 4 cut(s) 1601, 2524, 2686, 2740
EcoT14I CCWWGG 1 cut(s) 1800
ErhI CCWWGG 1 cut(s) 1800
FaeI CATG 8 cut(s) 362, 1079, 1444, 2183, 2278, 2516, 2554, 2681
FalI AAGNNNNNCTT 4 cut(s) 1502, 1534, 2471, 2503
FaqI GGGAC 1 cut(s) 748
FatI CATG 8 cut(s) 358, 1075, 1440, 2179, 2274, 2512, 2550, 2677
FauI CCCGC 1 cut(s) 63
FbaI TGATCA 1 cut(s) 1912
FblI GTMKAC 1 cut(s) 2067
FspBI CTAG 8 cut(s) 1055, 1139, 1337, 1538, 1544, 1629, 2088, 2697
GlaI GCGC 3 cut(s) 1105, 2549, 2801
GsaI CCCAGC 2 cut(s) 1062, 1583
HaeIII GGCC 6 cut(s) 1625, 1986, 2388, 2486, 2524, 2676
HapII CCGG 3 cut(s) 56, 178, 1854
HgaI GACGC 5 cut(s) 1223, 1359, 2336, 2393, 2761
HhaI GCGC 3 cut(s) 1106, 2550, 2802
Hin1I GRCGYC 1 cut(s) 2753
Hin1II CATG 8 cut(s) 362, 1079, 1444, 2183, 2278, 2516, 2554, 2681
Hin6I GCGC 3 cut(s) 1104, 2548, 2800
HinP1I GCGC 3 cut(s) 1104, 2548, 2800
HincII GTYRAC 2 cut(s) 49, 1926
HindII GTYRAC 2 cut(s) 49, 1926
HindIII AAGCTT 4 cut(s) 553, 710, 960, 2058
HinfI GANTC 6 cut(s) 50, 233, 674, 919, 1045, 2003
HpaII CCGG 3 cut(s) 56, 178, 1854
HphI GGTGA 7 cut(s) 70, 215, 337, 1160, 1205, 1373, 2777
Hpy166II GTNNAC 4 cut(s) 49, 1926, 1959, 2068
Hpy188I TCNGA 8 cut(s) 88, 829, 1131, 1429, 1462, 1860, 2352, 2599
Hpy8I GTNNAC 4 cut(s) 49, 1926, 1959, 2068
Hpy99I CGWCG 1 cut(s) 2352
HpyCH4III ACNGT 4 cut(s) 1100, 1935, 2344, 2725
HpyCH4IV ACGT 2 cut(s) 1390, 2070
HpyF3I CTNAG 6 cut(s) 264, 708, 894, 1035, 1656, 2669
HpySE526I ACGT 2 cut(s) 1390, 2070
Hsp92I GRCGYC 1 cut(s) 2753
Hsp92II CATG 8 cut(s) 362, 1079, 1444, 2183, 2278, 2516, 2554, 2681
HspAI GCGC 3 cut(s) 1104, 2548, 2800
Ksp22I TGATCA 1 cut(s) 1912
LguI GCTCTTC 1 cut(s) 1377
LmnI GCTCC 6 cut(s) 108, 120, 355, 809, 1636, 2323
LweI GCATC 8 cut(s) 655, 833, 852, 1330, 1537, 1715, 2313, 2391
MaeI CTAG 8 cut(s) 1055, 1139, 1337, 1538, 1544, 1629, 2088, 2697
MaeII ACGT 2 cut(s) 1390, 2070
MaeIII GTNAC 4 cut(s) 1148, 1935, 2646, 2765
MfeI CAATTG 1 cut(s) 1866
MflI RGATCY 4 cut(s) 978, 1432, 1540, 2734
MhlI GDGCHC 1 cut(s) 814
MlyI GAGTC 4 cut(s) 44, 683, 928, 1039
MmeI TCCRAC 1 cut(s) 2330
MroXI GAANNNNTTC 4 cut(s) 888, 1517, 2160, 2784
MslI CAYNNNNRTG 1 cut(s) 1964
MspA1I CMGCKG 3 cut(s) 70, 1889, 2673
MspI CCGG 3 cut(s) 56, 178, 1854
MspR9I CCNGG 5 cut(s) 179, 1603, 2526, 2688, 2742
MunI CAATTG 1 cut(s) 1866
Mva1269I GAATGC 1 cut(s) 949
MvaI CCWGG 4 cut(s) 1603, 2526, 2688, 2742
NciI CCSGG 1 cut(s) 179
NlaIII CATG 8 cut(s) 362, 1079, 1444, 2183, 2278, 2516, 2554, 2681
NlaIV GGNNCC 4 cut(s) 1411, 1600, 2325, 2523
NmeAIII GCCGAG 2 cut(s) 170, 817
NmuCI GTSAC 3 cut(s) 1148, 1935, 2765
NspI RCATGY 1 cut(s) 1444
PasI CCCWGGG 1 cut(s) 2741
PceI AGGCCT 1 cut(s) 2486
PciI ACATGT 1 cut(s) 1440
PciSI GCTCTTC 1 cut(s) 1377
PctI GAATGC 1 cut(s) 949
PdmI GAANNNNTTC 4 cut(s) 888, 1517, 2160, 2784
PfeI GAWTC 2 cut(s) 233, 2003
PfoI TCCNGGA 1 cut(s) 1601
PleI GAGTC 4 cut(s) 44, 682, 927, 1039
PpsI GAGTC 4 cut(s) 44, 682, 927, 1039
Ppu21I YACGTR 1 cut(s) 1391
PscI ACATGT 1 cut(s) 1440
PshBI ATTAAT 1 cut(s) 1155
Psp6I CCWGG 4 cut(s) 1601, 2524, 2686, 2740
PspFI CCCAGC 2 cut(s) 1058, 1579
PspGI CCWGG 4 cut(s) 1601, 2524, 2686, 2740
PspN4I GGNNCC 4 cut(s) 1411, 1600, 2325, 2523
PspPI GGNCC 4 cut(s) 1591, 1856, 1984, 2522
PstI CTGCAG 3 cut(s) 1321, 1576, 1909
PstNI CAGNNNCTG 1 cut(s) 1889
PsuI RGATCY 4 cut(s) 978, 1432, 1540, 2734
PvuII CAGCTG 1 cut(s) 1889
RsaI GTAC 1 cut(s) 2496
RsaNI GTAC 1 cut(s) 2495
RseI CAYNNNNRTG 1 cut(s) 1964
Rsr2I CGGWCCG 1 cut(s) 1856
RsrII CGGWCCG 1 cut(s) 1856
SapI GCTCTTC 1 cut(s) 1377
Sau96I GGNCC 4 cut(s) 1591, 1856, 1984, 2522
SchI GAGTC 4 cut(s) 44, 683, 928, 1039
ScrFI CCNGG 5 cut(s) 179, 1603, 2526, 2688, 2742
SduI GDGCHC 1 cut(s) 814
SfaNI GCATC 8 cut(s) 655, 833, 852, 1330, 1537, 1715, 2313, 2391
SfcI CTRYAG 6 cut(s) 1317, 1400, 1572, 1905, 1988, 2064
SinI GGWCC 2 cut(s) 1591, 1856
SmiMI CAYNNNNRTG 1 cut(s) 1964
SmlI CTYRAG 5 cut(s) 833, 1121, 1175, 2573, 2637
SmoI CTYRAG 5 cut(s) 833, 1121, 1175, 2573, 2637
SnaBI TACGTA 1 cut(s) 1391
SseBI AGGCCT 1 cut(s) 2486
SsiI CCGC 3 cut(s) 70, 1589, 2673
SspMI CTAG 8 cut(s) 1055, 1139, 1337, 1538, 1544, 1629, 2088, 2697
StuI AGGCCT 1 cut(s) 2486
StyD4I CCNGG 5 cut(s) 177, 1601, 2524, 2686, 2740
StyI CCWWGG 1 cut(s) 1800
TaaI ACNGT 4 cut(s) 1100, 1935, 2344, 2725
TaiI ACGT 2 cut(s) 1393, 2073
TaqI TCGA 8 cut(s) 188, 346, 385, 535, 677, 930, 2464, 2778
TauI GCSGC 1 cut(s) 2676
TfiI GAWTC 2 cut(s) 233, 2003
TscAI CASTG 1 cut(s) 2349
TseFI GTSAC 3 cut(s) 1148, 1935, 2765
Tsp45I GTSAC 3 cut(s) 1148, 1935, 2765
TspRI CASTG 1 cut(s) 2349
VpaK11BI GGWCC 2 cut(s) 1591, 1856
VspI ATTAAT 1 cut(s) 1155
XapI RAATTY 5 cut(s) 82, 1290, 1973, 2456, 2507
XbaI TCTAGA 1 cut(s) 1543
XceI RCATGY 1 cut(s) 1444
XmiI GTMKAC 1 cut(s) 2067
XmnI GAANNNNTTC 4 cut(s) 888, 1517, 2160, 2784
XspI CTAG 8 cut(s) 1055, 1139, 1337, 1538, 1544, 1629, 2088, 2697
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.