ABC transporter B family member
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ABC_membrane | PF00664 | 64 - 336 | 4.3e-61 | ABC transporter transmembrane region |
| ABC_tran | PF00005 | 404 - 552 | 1.7e-33 | ABC transporter |
| ABC_membrane | PF00664 | 719 - 991 | 3.8e-56 | ABC transporter transmembrane region |
| ABC_tran | PF00005 | 1061 - 1210 | 4.2e-35 | ABC transporter |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2597 |
| AccB1I | GGYRCC | 1 cut(s) | 3595 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 612, 1322, 2280 |
| AccI | GTMKAC | 2 cut(s) | 1999, 3251 |
| AccII | CGCG | 1 cut(s) | 1788 |
| AccIII | TCCGGA | 1 cut(s) | 3092 |
| AciI | CCGC | 4 cut(s) | 930, 1741, 1788, 3036 |
| AclWI | GGATC | 7 cut(s) | 1307, 1382, 1826, 1839, 1981, 3192, 3278 |
| AcoI | YGGCCR | 1 cut(s) | 48 |
| AcsI | RAATTY | 1 cut(s) | 1629 |
| AcuI | CTGAAG | 4 cut(s) | 1491, 2064, 2775, 3134 |
| AcyI | GRCGYC | 3 cut(s) | 616, 698, 2119 |
| AdeI | CACNNNGTG | 1 cut(s) | 2030 |
| AfaI | GTAC | 8 cut(s) | 135, 196, 329, 809, 2167, 2777, 3316, 3850 |
| AfeI | AGCGCT | 1 cut(s) | 3275 |
| AflIII | ACRYGT | 1 cut(s) | 177 |
| AgeI | ACCGGT | 1 cut(s) | 2045 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 502 |
| AjnI | CCWGG | 3 cut(s) | 168, 1401, 2121 |
| AleI | CACNNNNGTG | 2 cut(s) | 2448, 3521 |
| Alw21I | GWGCWC | 6 cut(s) | 522, 1660, 1751, 2035, 3032, 3634 |
| Alw26I | GTCTC | 8 cut(s) | 394, 623, 1073, 1143, 2113, 2319, 3343, 3785 |
| Alw44I | GTGCAC | 1 cut(s) | 2031 |
| AlwI | GGATC | 7 cut(s) | 1307, 1382, 1826, 1839, 1981, 3192, 3278 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1673 |
| Ama87I | CYCGRG | 1 cut(s) | 2446 |
| Aor13HI | TCCGGA | 1 cut(s) | 3092 |
| Aor51HI | AGCGCT | 1 cut(s) | 3275 |
| AoxI | GGCC | 4 cut(s) | 48, 1579, 1916, 2794 |
| ApaLI | GTGCAC | 1 cut(s) | 2031 |
| ApoI | RAATTY | 1 cut(s) | 1629 |
| AseI | ATTAAT | 2 cut(s) | 1347, 2288 |
| AsiGI | ACCGGT | 1 cut(s) | 2045 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1140, 2269 |
| AspA2I | CCTAGG | 1 cut(s) | 2161 |
| AspLEI | GCGC | 2 cut(s) | 1738, 3276 |
| AspS9I | GGNCC | 4 cut(s) | 1579, 1808, 2795, 3673 |
| AsuC2I | CCSGG | 2 cut(s) | 2554, 3008 |
| AsuHPI | GGTGA | 8 cut(s) | 268, 613, 1337, 1565, 2776, 3379, 3539, 3766 |
| AvaI | CYCGRG | 1 cut(s) | 2446 |
| AvaII | GGWCC | 2 cut(s) | 1808, 3673 |
| AvrII | CCTAGG | 1 cut(s) | 2161 |
| AxyI | CCTNAGG | 1 cut(s) | 1530 |
| BaeGI | GKGCMC | 2 cut(s) | 2035, 3174 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1533, 1566 |
| BamHI | GGATCC | 1 cut(s) | 1831 |
| BanI | GGYRCC | 1 cut(s) | 3595 |
| BanII | GRGCYC | 3 cut(s) | 2902, 3032, 3381 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2393, 2425 |
| BauI | CACGAG | 1 cut(s) | 673 |
| BbsI | GAAGAC | 1 cut(s) | 1143 |
| Bbv12I | GWGCWC | 6 cut(s) | 522, 1660, 1751, 2035, 3032, 3634 |
| BccI | CCATC | 8 cut(s) | 20, 606, 1120, 1451, 1832, 3182, 3305, 3720 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2454, 2488 |
| BciT130I | CCWGG | 3 cut(s) | 170, 1403, 2123 |
| BciVI | GTATCC | 2 cut(s) | 88, 505 |
| BclI | TGATCA | 8 cut(s) | 7, 243, 258, 387, 1906, 2440, 2766, 3798 |
| BcnI | CCSGG | 2 cut(s) | 2554, 3008 |
| BcoDI | GTCTC | 8 cut(s) | 394, 623, 1073, 1143, 2113, 2319, 3343, 3785 |
| BfaI | CTAG | 7 cut(s) | 1233, 1538, 1823, 2162, 2516, 2621, 3614 |
| BfmI | CTRYAG | 6 cut(s) | 99, 901, 1599, 2169, 2352, 3696 |
| BfoI | RGCGCY | 1 cut(s) | 3277 |
| BfuI | GTATCC | 2 cut(s) | 88, 505 |
| BlnI | CCTAGG | 1 cut(s) | 2161 |
| BlpI | GCTNAGC | 1 cut(s) | 1491 |
| Bme1390I | CCNGG | 5 cut(s) | 170, 1403, 2123, 2554, 3008 |
| Bme18I | GGWCC | 2 cut(s) | 1808, 3673 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 502 |
| BmeT110I | CYCGRG | 1 cut(s) | 2446 |
| BmgT120I | GGNCC | 4 cut(s) | 1579, 1808, 2795, 3673 |
| BmiI | GGNNCC | 5 cut(s) | 1407, 1580, 1833, 3378, 3597 |
| BmrFI | CCNGG | 5 cut(s) | 170, 1403, 2123, 2554, 3008 |
| BmrI | ACTGGG | 2 cut(s) | 492, 2144 |
| BmuI | ACTGGG | 2 cut(s) | 492, 2144 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1724 |
| BpiI | GAAGAC | 1 cut(s) | 1143 |
| BpmI | CTGGAG | 1 cut(s) | 414 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1491 |
| BpuEI | CTTGAG | 3 cut(s) | 308, 451, 1765 |
| BpuMI | CCSGG | 2 cut(s) | 2554, 3008 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3803 |
| BsaHI | GRCGYC | 3 cut(s) | 616, 698, 2119 |
| BsaWI | WCCGGW | 5 cut(s) | 662, 1192, 2045, 3060, 3092 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 576, 606, 720, 750, 800, 830 |
| Bse118I | RCCGGY | 3 cut(s) | 46, 998, 2045 |
| Bse1I | ACTGG | 6 cut(s) | 397, 487, 562, 2150, 3627, 3675 |
| Bse21I | CCTNAGG | 1 cut(s) | 1530 |
| Bse3DI | GCAATG | 4 cut(s) | 540, 1770, 3411, 3768 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3803 |
| BseAI | TCCGGA | 1 cut(s) | 3092 |
| BseBI | CCWGG | 3 cut(s) | 170, 1403, 2123 |
| BseJI | GATNNNNATC | 1 cut(s) | 3803 |
| BseMI | GCAATG | 4 cut(s) | 540, 1770, 3411, 3768 |
| BseMII | CTCAG | 6 cut(s) | 1482, 1544, 1580, 1665, 1809, 3432 |
| BseNI | ACTGG | 6 cut(s) | 397, 487, 562, 2150, 3627, 3675 |
| BseSI | GKGCMC | 2 cut(s) | 2035, 3174 |
| BseYI | CCCAGC | 2 cut(s) | 2357, 2894 |
| BsgI | GTGCAG | 1 cut(s) | 3756 |
| Bsh1236I | CGCG | 1 cut(s) | 1788 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1284 |
| BshFI | GGCC | 4 cut(s) | 50, 1581, 1918, 2796 |
| BshNI | GGYRCC | 1 cut(s) | 3595 |
| BshTI | ACCGGT | 1 cut(s) | 2045 |
| BsiEI | CGRYCG | 1 cut(s) | 1284 |
| BsiHKAI | GWGCWC | 6 cut(s) | 522, 1660, 1751, 2035, 3032, 3634 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2446 |
| BslFI | GGGAC | 2 cut(s) | 685, 1548 |
| BsmAI | GTCTC | 8 cut(s) | 394, 623, 1073, 1143, 2113, 2319, 3343, 3785 |
| BsmBI | CGTCTC | 1 cut(s) | 623 |
| BsmFI | GGGAC | 2 cut(s) | 685, 1548 |
| BsmI | GAATGC | 1 cut(s) | 1765 |
| BsnI | GGCC | 4 cut(s) | 50, 1581, 1918, 2796 |
| BsoBI | CYCGRG | 1 cut(s) | 2446 |
| Bsp1286I | GDGCHC | 9 cut(s) | 522, 1660, 1751, 2035, 2902, 3032, 3174, 3381, 3634 |
| Bsp13I | TCCGGA | 1 cut(s) | 3092 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1491 |
| Bsp19I | CCATGG | 3 cut(s) | 51, 1210, 3205 |
| BspACI | CCGC | 4 cut(s) | 930, 1741, 1788, 3036 |
| BspANI | GGCC | 4 cut(s) | 50, 1581, 1918, 2796 |
| BspCNI | CTCAG | 6 cut(s) | 1483, 1543, 1579, 1666, 1810, 3433 |
| BspEI | TCCGGA | 1 cut(s) | 3092 |
| BspFNI | CGCG | 1 cut(s) | 1788 |
| BspHI | TCATGA | 4 cut(s) | 972, 1909, 2529, 2652 |
| BspLI | GGNNCC | 5 cut(s) | 1407, 1580, 1833, 3378, 3597 |
| BspMAI | CTGCAG | 2 cut(s) | 103, 905 |
| BspPI | GGATC | 7 cut(s) | 1307, 1382, 1826, 1839, 1981, 3192, 3278 |
| BspQI | GCTCTTC | 1 cut(s) | 155 |
| BspT107I | GGYRCC | 1 cut(s) | 3595 |
| BsrDI | GCAATG | 4 cut(s) | 540, 1770, 3411, 3768 |
| BsrFI | RCCGGY | 3 cut(s) | 46, 998, 2045 |
| BsrI | ACTGG | 6 cut(s) | 397, 487, 562, 2150, 3627, 3675 |
| BssAI | RCCGGY | 3 cut(s) | 46, 998, 2045 |
| BssNI | GRCGYC | 3 cut(s) | 616, 698, 2119 |
| BssSI | CACGAG | 1 cut(s) | 673 |
| BssT1I | CCWWGG | 6 cut(s) | 51, 312, 606, 1210, 2161, 3205 |
| Bst2BI | CACGAG | 1 cut(s) | 673 |
| Bst2UI | CCWGG | 3 cut(s) | 170, 1403, 2123 |
| Bst6I | CTCTTC | 2 cut(s) | 155, 1978 |
| BstACI | GRCGYC | 3 cut(s) | 616, 698, 2119 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1046, 1247, 1655 |
| BstC8I | GCNNGC | 9 cut(s) | 48, 103, 795, 1020, 1497, 1853, 2698, 2881, 2917 |
| BstDSI | CCRYGG | 5 cut(s) | 51, 703, 1210, 2709, 3205 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 2619, 3291 |
| BstFNI | CGCG | 1 cut(s) | 1788 |
| BstH2I | RGCGCY | 1 cut(s) | 3277 |
| BstHHI | GCGC | 2 cut(s) | 1738, 3276 |
| BstMAI | GTCTC | 8 cut(s) | 394, 623, 1073, 1143, 2113, 2319, 3343, 3785 |
| BstMCI | CGRYCG | 1 cut(s) | 1284 |
| BstNI | CCWGG | 3 cut(s) | 170, 1403, 2123 |
| BstNSI | RCATGY | 3 cut(s) | 181, 2883, 3845 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1724 |
| BstSCI | CCNGG | 5 cut(s) | 168, 1401, 2121, 2552, 3006 |
| BstSFI | CTRYAG | 6 cut(s) | 99, 901, 1599, 2169, 2352, 3696 |
| BstSLI | GKGCMC | 2 cut(s) | 2035, 3174 |
| BstUI | CGCG | 1 cut(s) | 1788 |
| BstV2I | GAAGAC | 1 cut(s) | 1143 |
| BstX2I | RGATCY | 2 cut(s) | 1831, 3184 |
| BstYI | RGATCY | 2 cut(s) | 1831, 3184 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1530 |
| BsuI | GTATCC | 2 cut(s) | 88, 505 |
| BsuRI | GGCC | 4 cut(s) | 50, 1581, 1918, 2796 |
| BtgI | CCRYGG | 5 cut(s) | 51, 703, 1210, 2709, 3205 |
| BtgZI | GCGATG | 1 cut(s) | 1769 |
| BtsI | GCAGTG | 3 cut(s) | 1782, 1885, 3756 |
| Cac8I | GCNNGC | 9 cut(s) | 48, 103, 795, 1020, 1497, 1853, 2698, 2881, 2917 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1673 |
| CciI | TCATGA | 4 cut(s) | 972, 1909, 2529, 2652 |
| CfoI | GCGC | 2 cut(s) | 1738, 3276 |
| Cfr10I | RCCGGY | 3 cut(s) | 46, 998, 2045 |
| Cfr13I | GGNCC | 4 cut(s) | 1579, 1808, 2795, 3673 |
| CseI | GACGC | 4 cut(s) | 605, 687, 2010, 2127 |
| Csp6I | GTAC | 8 cut(s) | 134, 195, 328, 808, 2166, 2776, 3315, 3849 |
| CspAI | ACCGGT | 1 cut(s) | 2045 |
| CviQI | GTAC | 8 cut(s) | 134, 195, 328, 808, 2166, 2776, 3315, 3849 |
| DraI | TTTAAA | 1 cut(s) | 1617 |
| DraIII | CACNNNGTG | 1 cut(s) | 2030 |
| DriI | GACNNNNNGTC | 1 cut(s) | 502 |
| EaeI | YGGCCR | 1 cut(s) | 48 |
| Eam1104I | CTCTTC | 2 cut(s) | 155, 1978 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 502 |
| EarI | CTCTTC | 2 cut(s) | 155, 1978 |
| EciI | GGCGGA | 1 cut(s) | 945 |
| Ecl136II | GAGCTC | 1 cut(s) | 3030 |
| Eco130I | CCWWGG | 6 cut(s) | 51, 312, 606, 1210, 2161, 3205 |
| Eco24I | GRGCYC | 3 cut(s) | 2902, 3032, 3381 |
| Eco32I | GATATC | 1 cut(s) | 2220 |
| Eco47I | GGWCC | 2 cut(s) | 1808, 3673 |
| Eco47III | AGCGCT | 1 cut(s) | 3275 |
| Eco53kI | GAGCTC | 1 cut(s) | 3030 |
| Eco57I | CTGAAG | 4 cut(s) | 1491, 2064, 2775, 3134 |
| Eco81I | CCTNAGG | 1 cut(s) | 1530 |
| Eco88I | CYCGRG | 1 cut(s) | 2446 |
| EcoICRI | GAGCTC | 1 cut(s) | 3030 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 2619, 3291 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2795 |
| EcoRII | CCWGG | 3 cut(s) | 168, 1401, 2121 |
| EcoRV | GATATC | 1 cut(s) | 2220 |
| EcoT14I | CCWWGG | 6 cut(s) | 51, 312, 606, 1210, 2161, 3205 |
| EcoT22I | ATGCAT | 1 cut(s) | 2881 |
| EcoT38I | GRGCYC | 3 cut(s) | 2902, 3032, 3381 |
| ErhI | CCWWGG | 6 cut(s) | 51, 312, 606, 1210, 2161, 3205 |
| Esp3I | CGTCTC | 1 cut(s) | 623 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2097, 2129, 2225, 2257 |
| FaqI | GGGAC | 2 cut(s) | 685, 1548 |
| FauNDI | CATATG | 1 cut(s) | 3418 |
| FbaI | TGATCA | 8 cut(s) | 7, 243, 258, 387, 1906, 2440, 2766, 3798 |
| FblI | GTMKAC | 2 cut(s) | 1999, 3251 |
| FriOI | GRGCYC | 3 cut(s) | 2902, 3032, 3381 |
| FspBI | CTAG | 7 cut(s) | 1233, 1538, 1823, 2162, 2516, 2621, 3614 |
| GlaI | GCGC | 2 cut(s) | 1737, 3275 |
| GsaI | CCCAGC | 2 cut(s) | 2361, 2898 |
| GsuI | CTGGAG | 1 cut(s) | 414 |
| HaeII | RGCGCY | 1 cut(s) | 3277 |
| HaeIII | GGCC | 4 cut(s) | 50, 1581, 1918, 2796 |
| HgaI | GACGC | 4 cut(s) | 605, 687, 2010, 2127 |
| HhaI | GCGC | 2 cut(s) | 1738, 3276 |
| Hin1I | GRCGYC | 3 cut(s) | 616, 698, 2119 |
| Hin6I | GCGC | 2 cut(s) | 1736, 3274 |
| HinP1I | GCGC | 2 cut(s) | 1736, 3274 |
| HincII | GTYRAC | 3 cut(s) | 496, 2000, 3252 |
| HindII | GTYRAC | 3 cut(s) | 496, 2000, 3252 |
| HindIII | AAGCTT | 2 cut(s) | 553, 828 |
| HphI | GGTGA | 8 cut(s) | 268, 613, 1337, 1565, 2776, 3379, 3539, 3766 |
| Hpy99I | CGWCG | 1 cut(s) | 2004 |
| HpyAV | CCTTC | 8 cut(s) | 1447, 1959, 2248, 2395, 2786, 3109, 3422, 3586 |
| HpyCH4IV | ACGT | 3 cut(s) | 330, 453, 3305 |
| HpySE526I | ACGT | 3 cut(s) | 330, 453, 3305 |
| Hsp92I | GRCGYC | 3 cut(s) | 616, 698, 2119 |
| HspAI | GCGC | 2 cut(s) | 1736, 3274 |
| Kpn2I | TCCGGA | 1 cut(s) | 3092 |
| KroI | GCCGGC | 1 cut(s) | 46 |
| KroNI | GCCGGC | 1 cut(s) | 48 |
| Ksp22I | TGATCA | 8 cut(s) | 7, 243, 258, 387, 1906, 2440, 2766, 3798 |
| LguI | GCTCTTC | 1 cut(s) | 155 |
| LmnI | GCTCC | 4 cut(s) | 728, 1964, 2462, 3376 |
| MaeI | CTAG | 7 cut(s) | 1233, 1538, 1823, 2162, 2516, 2621, 3614 |
| MaeII | ACGT | 3 cut(s) | 330, 453, 3305 |
| MaeIII | GTNAC | 2 cut(s) | 670, 905 |
| MboII | GAAGA | 9 cut(s) | 26, 142, 1148, 1484, 1625, 1920, 1995, 2702, 2768 |
| MfeI | CAATTG | 4 cut(s) | 1794, 2457, 2547, 2736 |
| MflI | RGATCY | 2 cut(s) | 1831, 3184 |
| MhlI | GDGCHC | 9 cut(s) | 522, 1660, 1751, 2035, 2902, 3032, 3174, 3381, 3634 |
| MlyI | GAGTC | 5 cut(s) | 2388, 2977, 3083, 3379, 3774 |
| MmeI | TCCRAC | 5 cut(s) | 706, 1237, 1697, 2485, 3208 |
| Mph1103I | ATGCAT | 1 cut(s) | 2881 |
| MroI | TCCGGA | 1 cut(s) | 3092 |
| MroNI | GCCGGC | 1 cut(s) | 46 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1140, 2269 |
| MslI | CAYNNNNRTG | 6 cut(s) | 182, 977, 1027, 1775, 2448, 3521 |
| MspA1I | CMGCKG | 1 cut(s) | 1366 |
| MspR9I | CCNGG | 5 cut(s) | 170, 1403, 2123, 2554, 3008 |
| MunI | CAATTG | 4 cut(s) | 1794, 2457, 2547, 2736 |
| Mva1269I | GAATGC | 1 cut(s) | 1765 |
| MvaI | CCWGG | 3 cut(s) | 170, 1403, 2123 |
| MvnI | CGCG | 1 cut(s) | 1788 |
| NaeI | GCCGGC | 1 cut(s) | 48 |
| NciI | CCSGG | 2 cut(s) | 2554, 3008 |
| NcoI | CCATGG | 3 cut(s) | 51, 1210, 3205 |
| NdeI | CATATG | 1 cut(s) | 3418 |
| NgoMIV | GCCGGC | 1 cut(s) | 46 |
| NlaIV | GGNNCC | 5 cut(s) | 1407, 1580, 1833, 3378, 3597 |
| NmuCI | GTSAC | 1 cut(s) | 670 |
| NsiI | ATGCAT | 1 cut(s) | 2881 |
| NspI | RCATGY | 3 cut(s) | 181, 2883, 3845 |
| OliI | CACNNNNGTG | 2 cut(s) | 2448, 3521 |
| PaeI | GCATGC | 1 cut(s) | 2883 |
| PaeR7I | CTCGAG | 1 cut(s) | 2446 |
| PagI | TCATGA | 4 cut(s) | 972, 1909, 2529, 2652 |
| PciI | ACATGT | 1 cut(s) | 177 |
| PciSI | GCTCTTC | 1 cut(s) | 155 |
| PctI | GAATGC | 1 cut(s) | 1765 |
| PdiI | GCCGGC | 1 cut(s) | 48 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1140, 2269 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 612, 1322, 2280 |
| PinAI | ACCGGT | 1 cut(s) | 2045 |
| PleI | GAGTC | 5 cut(s) | 2387, 2977, 3083, 3378, 3773 |
| PpsI | GAGTC | 5 cut(s) | 2387, 2977, 3083, 3378, 3773 |
| PscI | ACATGT | 1 cut(s) | 177 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1724 |
| PshBI | ATTAAT | 2 cut(s) | 1347, 2288 |
| PsiI | TTATAA | 1 cut(s) | 2597 |
| Psp124BI | GAGCTC | 1 cut(s) | 3032 |
| Psp6I | CCWGG | 3 cut(s) | 168, 1401, 2121 |
| PspFI | CCCAGC | 2 cut(s) | 2357, 2894 |
| PspGI | CCWGG | 3 cut(s) | 168, 1401, 2121 |
| PspN4I | GGNNCC | 5 cut(s) | 1407, 1580, 1833, 3378, 3597 |
| PspPI | GGNCC | 4 cut(s) | 1579, 1808, 2795, 3673 |
| PspXI | VCTCGAGB | 1 cut(s) | 2446 |
| PstI | CTGCAG | 2 cut(s) | 103, 905 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1673 |
| PsuI | RGATCY | 2 cut(s) | 1831, 3184 |
| PvuII | CAGCTG | 1 cut(s) | 1366 |
| RsaI | GTAC | 8 cut(s) | 135, 196, 329, 809, 2167, 2777, 3316, 3850 |
| RsaNI | GTAC | 8 cut(s) | 134, 195, 328, 808, 2166, 2776, 3315, 3849 |
| RseI | CAYNNNNRTG | 6 cut(s) | 182, 977, 1027, 1775, 2448, 3521 |
| SacI | GAGCTC | 1 cut(s) | 3032 |
| SalI | GTCGAC | 2 cut(s) | 1998, 3250 |
| SapI | GCTCTTC | 1 cut(s) | 155 |
| Sau96I | GGNCC | 4 cut(s) | 1579, 1808, 2795, 3673 |
| SchI | GAGTC | 5 cut(s) | 2388, 2977, 3083, 3379, 3774 |
| ScrFI | CCNGG | 5 cut(s) | 170, 1403, 2123, 2554, 3008 |
| SduI | GDGCHC | 9 cut(s) | 522, 1660, 1751, 2035, 2902, 3032, 3174, 3381, 3634 |
| SfcI | CTRYAG | 6 cut(s) | 99, 901, 1599, 2169, 2352, 3696 |
| Sfr274I | CTCGAG | 1 cut(s) | 2446 |
| SinI | GGWCC | 2 cut(s) | 1808, 3673 |
| SlaI | CTCGAG | 1 cut(s) | 2446 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 182, 977, 1027, 1775, 2448, 3521 |
| SmlI | CTYRAG | 4 cut(s) | 323, 430, 1744, 2446 |
| SmoI | CTYRAG | 4 cut(s) | 323, 430, 1744, 2446 |
| SphI | GCATGC | 1 cut(s) | 2883 |
| SsiI | CCGC | 4 cut(s) | 930, 1741, 1788, 3036 |
| SspI | AATATT | 3 cut(s) | 1206, 1441, 2292 |
| SspMI | CTAG | 7 cut(s) | 1233, 1538, 1823, 2162, 2516, 2621, 3614 |
| SstI | GAGCTC | 1 cut(s) | 3032 |
| StyD4I | CCNGG | 5 cut(s) | 168, 1401, 2121, 2552, 3006 |
| StyI | CCWWGG | 6 cut(s) | 51, 312, 606, 1210, 2161, 3205 |
| TaiI | ACGT | 3 cut(s) | 333, 456, 3308 |
| TaqI | TCGA | 8 cut(s) | 1280, 1999, 2447, 2474, 2646, 3251, 3691, 3807 |
| TaqII | GACCGA | 1 cut(s) | 3690 |
| TatI | WGTACW | 1 cut(s) | 807 |
| TauI | GCSGC | 1 cut(s) | 3038 |
| TseFI | GTSAC | 1 cut(s) | 670 |
| Tsp45I | GTSAC | 1 cut(s) | 670 |
| TspGWI | ACGGA | 2 cut(s) | 2372, 2726 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 612, 1322, 2280 |
| VneI | GTGCAC | 1 cut(s) | 2031 |
| VpaK11BI | GGWCC | 2 cut(s) | 1808, 3673 |
| VspI | ATTAAT | 2 cut(s) | 1347, 2288 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 2619, 3291 |
| XapI | RAATTY | 1 cut(s) | 1629 |
| XceI | RCATGY | 3 cut(s) | 181, 2883, 3845 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2716 |
| XhoI | CTCGAG | 1 cut(s) | 2446 |
| XmaJI | CCTAGG | 1 cut(s) | 2161 |
| XmiI | GTMKAC | 2 cut(s) | 1999, 3251 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1140, 2269 |
| XspI | CTAG | 7 cut(s) | 1233, 1538, 1823, 2162, 2516, 2621, 3614 |
| Zsp2I | ATGCAT | 1 cut(s) | 2881 |