Rh4AG276100

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Forward (+)
59268355 .. 59274291
5937 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG276100.1

Sequence Viewer

Length: 3594 bp
ATGTCTTGTTGGATGATCACCGGAGAGAGACAGGCTGCGAGAATAAGATTTTTATACTTGAAAACAATATTGAGGCAAGACGTAGGCTTTTTTGATAAAGAAACTAGGACTGGAGAAGTTATTGGGAGGATGTCAGGTGATACTGTGCTCATTCAGGAGGCCATGGGAGAGAAGGTATGTATTTACATGACACGAAAAAGCCTCAAGTTGTTGCCACCTTTTCTGAAACCCTTCATCATTTCTTTCACTCTCTTATTGCAGGTAGGAACTTGTATCCAGTTAGTTGCAACATTTTTTGGAGGCTTTATCATAGCCTTTGTTAAGGGATGGCTTCTTACCCTGGTCATGCTTTCTTCTATCCCCGCTCTTGTCATCTCTGGTGCTGTCATGAGCATCATCGTATCAAAGTTGGCATCTCGTGCACAAGCTGCTTATTCAGCAGGAGCATCTGTGGTTGAGCAGACAATTGGTTCAATAAGAACTGTTGCATCATTTACAGGGGAGAAACAAGCTATAACTAAGTACAACAGCTCTATAAATAAAGCTTACAAGTCTGGTGTGCAAGAGGGTTTGGCATCTGGGTTGGGTATCGGTTCAGTTTTGCTTATTATATTCTGTACTTTTGCTTTGGCTACATGGTATGGCGGAAAAATGATACTTGAAAAGGGATATAAAGGAGGAGATGTCATAAATGTAGTTTTTGCTGTGTTGACTGGCTCCTTCTCTCTTGGGCAGACATCTCCATGCTTGGCCGCATTTGCTTCTGGGAAAGCTGCAGCTTATAAGATGTTTGAGACAATTAGCAGAAACCCAGAGATAGATGCTTCTGATACTAAAGGGAAGCAATTACAAGATATTAGAGGAGACATAGAACTGAGGGATGTTCATTTTAGTTATCCTGCAAGACCAGATGAACATATATTCCGTGGATTTTCTCTCACAATACCTAGTGGTGCAACTGCTGCTTTGGTAGGAGAGAGCGGAAGTGGCAAATCAACTGTAATCAGTTTGATTGAGAGATTTTATGACCCACAGGCCGGTGAAGTTCTTATTGACGGTGTCAATCTCAAAGAGTTCCAGCTGAAATGGATCAGGCAGAAAATAGGTCTTGTCAGCCAGGAACCTGTTTTGTTTACTTGCAGCATTAGAGATAATATTGGCTATGGGAAGGATGGTGCAACTATTGAAGAAATAAGAGCTGCTGCTGAGCTTGCCAATGCTGCTAAATTCATAGACAAACTTCCTCAGGGACTAGATACAATGGTGGGTGAACATGGAACTCAACTATCTGGGGGCCAAAAGCAGAGAGTTGCTATAGCTCGAGCAATTCTAAAAACCCCAAGAATTTTACTTCTAGACGAAGCCACAAGTGCTCTTGACGCAGAATCTGAGAGAGTTGTGCAGGAGGCACTGGATAGAATTATGGTTAACCGGACTACTGTCATAGTAGCCCATCGCTTGAGCACAGTAAGGAATGCTGATACCATTGCTGTCATACATCGAGGAACAATTGTTGAACAAGGGCCACATTCCGAGCTAGTTAAGGATCCTGAGGGAGCATATAGCCAGCTTATAAGATTACAAGAAATGAGAACTGTGTCAGAACAGGCTGATCTAAATGATCAGGATAGGCCAGATATTTCTTCTGATTCTCGGAGACAGTCAAGTCAAAGATTTTCTTTATTAAGATCCATAAGCCGTGGATCATCTGGAAGTGCAAATAGTAGTCGTCACTCATTCTCAATCTCATATGGTGGTGCACCTACTGCAATCAGCATCCTTGAAACAAATCCTGCTGAACCTGATACTCATGCACCAGCATCATCAAATGGGCATGCAGAAGTCTCACTTAGCCGCCTAGGTGCCCTGAACAAGCCAGAGATACCAGTGCTGCTCCTTGGTACTTTAGCTGCAGCAGCCGATGGGGTGATCTTACCTATTTTTGGGATACTAATATCCAGTGTAATCAAGACCTTCTTTGAGCCACCTGATCAACTGAGTAAGGATTCAAAGTTTTGGGCATTAATCTTTGTTGTTATTGGAGTTGCATCATTCTTGGCACAATCATCAGGAGCATATCTTTTTAGTGTGGCTGGATGTAAGTTGATAAGAAGAGTTCGATCAAAGTGCTTTGAGAAGGTGGTTTACATGGACATAGGTTGGTTTGATGAGTCTGATCATTCAAGTGGTGCAATTGGGGCAAGGCTTTCTACAGATGCGGCTTCTCTAAGAGGATTGGTTGGAGGTGCTCTAGGTTTGTTGGTTCACAATATAGCAACTGCAGTTGCCGGCCTAGTTATTGCTTTCGTAGCAAATTGGCAATTGGCTCTTATAATCCTTGTCCTGCTGCCTATGTTAGGACTAAGTGGATATTTTCAAGTCAAGTTAATGAAAGGATTCAGTGCAGATGCAAAGAAAATGTACGAGGATGCAAGCCAAGTAGCCAATGATGCTGTTGGGAGTATTAGAACAATTGCTTCCTTTTGTGCTGAAGAGAAGGTGATGGAACTGTACCAGAAAAAATGCGAAGGTCCTATTAAAAGTGGGATAAGACAAGGCTTAGTTAGCGGAACTGGTTTTGGGCTGTCATTCTTTTTGCTATTTTCTGTGTATGCCTGCAGTTTCTATGCTGGAGCCCGACTTGTTGCAGCAGGCAAGACAGAATTTTCTAACGTGTTTCGGGTTTTCTTTGCTCTCACTATGACAGCGGTTGGAATATCTCAGTCGAACTCCCTATCCCCTAATGTAAGTAAAGGAAAGAGTTCTGCTTCTTCCATATTTGCAATTCTTGACGGCAAGTCAAAAATAGACTCTAGTGACGACTCTGGAACTACAATAGAAAATGTGAAGGGAGATATTGAACTACGCCATGTCAGTTTCAAGTATCCAGCTAGACCCAACGTGCCAATCTTCCAGGATCTTTGCTTGACCATTCGTCATGGCAAGACTGTTGCTCTGGTTGGAGAAAGTGGTAGTGGGAAGTCAACAGTGATCTCATTGTTGCAGAGATTTTATGACCCTGATTCAGGTCACATTACATTAGATGGAATCGAAATCCAAAAGCTACAATTGAAGTGGTTGAGACAGCAAATGGGGCTCGTGAGCCAAGAGCCTCTGCTGTTTAATGACACTATCCGAGCCAACATTGCATATGGAAAGGATGGGAATGCAACCGAAGCTGACATTATAGCTGCAGCAGAATTGGCAAATGCCCACAAGTTCATTAGTAGCTTACAACAGGGTTACGATACAGTAGTAGGAGAACGGGGGGTCCAATTGTCAGGTGGACAGAAACAAAGGGTGGCAATTGCACGAGCTATTTTGAAGGCGCCAAAGATATTACTCCTAGATGAGGCTACCAGTGCTCTTGATGCTGAATCCGAACGAGTCGTTCAAGATGCATTGGACAGAGTTATGGTGGATCGAACAACAGTGGTGGTTGCCCATCGGTTATCGACAATCAGAAGTGCAGATTTGATAGCAGTGGTAAAGAATGGAGTCATTGCAGAGAAAGGAAAGCATGAGACTTTGATCAATATCAAGGATGGCACTTATGCTTCTCTGGTAGCTTTACATGCAAGTGCCTCATCTTAG

Protein Analysis

1197

Amino Acids

128.66

Weight (kDa)

8.75

Isoelectric Point (pI)

38.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 2 - 60 9.2e-11 ABC transporter transmembrane region
ABC_membrane PF00664 80 - 241 3.3e-29 ABC transporter transmembrane region
ABC_tran PF00005 309 - 457 1.4e-33 ABC transporter
ABC_membrane PF00664 631 - 904 3.6e-59 ABC transporter transmembrane region
ABC_tran PF00005 972 - 1121 9.6e-35 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 783, 1574, 2333
AasI GACNNNNNNGTC 1 cut(s) 1665
Acc36I ACCTGC 1 cut(s) 250
AccB1I GGYRCC 2 cut(s) 1862, 3328
AccBSI CCGCTC 2 cut(s) 365, 981
AciI CCGC 8 cut(s) 363, 645, 753, 981, 1855, 2219, 2568, 2708
AclWI GGATC 7 cut(s) 1097, 1541, 1554, 1683, 1711, 2925, 3429
AcoI YGGCCR 1 cut(s) 750
AcsI RAATTY 3 cut(s) 1226, 1344, 2663
AcuI CTGAAG 1 cut(s) 2511
AcyI GRCGYC 1 cut(s) 3329
AfaI GTAC 5 cut(s) 524, 619, 1903, 2423, 2513
AfiI CCNNNNNNNGG 5 cut(s) 1037, 1943, 2357, 3026, 3352
AflIII ACRYGT 1 cut(s) 2673
AhdI GACNNNNNGTC 2 cut(s) 2797, 2934
AjnI CCWGG 3 cut(s) 339, 1116, 2913
AloI GAACNNNNNNTCC 6 cut(s) 906, 938, 2720, 2752, 3255, 3287
Alw21I GWGCWC 7 cut(s) 150, 424, 1375, 1466, 1762, 2251, 3367
Alw26I GTCTC 7 cut(s) 22, 788, 858, 1651, 1849, 3076, 3518
Alw44I GTGCAC 2 cut(s) 420, 1758
AlwI GGATC 7 cut(s) 1097, 1541, 1554, 1683, 1711, 2925, 3429
AlwNI CAGNNNCTG 1 cut(s) 1388
Ama87I CYCGRG 1 cut(s) 1320
AoxI GGCC 7 cut(s) 159, 750, 1035, 1294, 1523, 1631, 2290
ApaLI GTGCAC 2 cut(s) 420, 1758
ApoI RAATTY 3 cut(s) 1226, 1344, 2663
AseI ATTAAT 1 cut(s) 2024
Asp700I GAANNNNTTC 3 cut(s) 230, 2396, 2761
AspA2I CCTAGG 1 cut(s) 1858
AspLEI GCGC 1 cut(s) 3331
AspS9I GGNCC 4 cut(s) 1294, 1523, 2531, 3271
AsuHPI GGTGA 6 cut(s) 10, 149, 1052, 1280, 1939, 2512
AvaI CYCGRG 1 cut(s) 1320
AvaII GGWCC 2 cut(s) 2531, 3271
AvrII CCTAGG 1 cut(s) 1858
AxyI CCTNAGG 2 cut(s) 1245, 1551
BaeGI GKGCMC 3 cut(s) 424, 1762, 1867
BaeI ACNNNNGTAYC 4 cut(s) 1248, 1281, 3240, 3273
BamHI GGATCC 1 cut(s) 1546
BanI GGYRCC 2 cut(s) 1862, 3328
BanII GRGCYC 2 cut(s) 2638, 3099
BarI GAAGNNNNNNTAC 2 cut(s) 2129, 2161
BauI CACGAG 3 cut(s) 417, 3098, 3312
Bbv12I GWGCWC 7 cut(s) 150, 424, 1375, 1466, 1762, 2251, 3367
BccI CCATC 9 cut(s) 321, 1166, 1461, 1916, 2497, 3038, 3155, 3453, 3539
BceAI ACGGC 2 cut(s) 1683, 2809
BcgI CGANNNNNNTGC 2 cut(s) 2109, 2143
BciT130I CCWGG 3 cut(s) 341, 1118, 2915
BciVI GTATCC 3 cut(s) 284, 1941, 2895
BclI TGATCA 5 cut(s) 15, 1621, 1990, 2176, 3531
BcoDI GTCTC 7 cut(s) 22, 788, 858, 1651, 1849, 3076, 3518
BfmI CTRYAG 7 cut(s) 774, 1314, 1911, 2211, 2280, 2617, 3192
BfoI RGCGCY 1 cut(s) 3332
BfuAI ACCTGC 1 cut(s) 250
BfuI GTATCC 3 cut(s) 284, 1941, 2895
BlnI CCTAGG 1 cut(s) 1858
BlpI GCTNAGC 1 cut(s) 1206
Bme1390I CCNGG 3 cut(s) 341, 1118, 2915
Bme18I GGWCC 2 cut(s) 2531, 3271
BmeRI GACNNNNNGTC 2 cut(s) 2797, 2934
BmeT110I CYCGRG 1 cut(s) 1320
BmgT120I GGNCC 4 cut(s) 1294, 1523, 2531, 3271
BmiI GGNNCC 8 cut(s) 718, 1122, 1295, 1548, 1864, 2635, 3272, 3330
BmrFI CCNGG 3 cut(s) 341, 1118, 2915
BoxI GACNNNNGTC 1 cut(s) 1439
BpmI CTGGAG 2 cut(s) 132, 2652
Bpu1102I GCTNAGC 1 cut(s) 1206
BpuEI CTTGAG 2 cut(s) 188, 1480
BsaBI GATNNNNATC 1 cut(s) 3536
BsaHI GRCGYC 1 cut(s) 3329
BsaJI CCNNGG 6 cut(s) 162, 339, 925, 1699, 1858, 1897
BsaWI WCCGGW 2 cut(s) 20, 1431
BsaXI ACNNNNNCTCC 6 cut(s) 159, 189, 435, 465, 669, 699
Bsc4I CCNNNNNNNGG 5 cut(s) 1037, 1943, 2357, 3026, 3352
Bse118I RCCGGY 2 cut(s) 1037, 2288
Bse1I ACTGG 8 cut(s) 115, 277, 718, 1416, 1886, 1959, 2578, 3360
Bse21I CCTNAGG 2 cut(s) 1245, 1551
Bse3DI GCAATG 3 cut(s) 1485, 3144, 3501
Bse8I GATNNNNATC 1 cut(s) 3536
BseBI CCWGG 3 cut(s) 341, 1118, 2915
BseDI CCNNGG 6 cut(s) 162, 339, 925, 1699, 1858, 1897
BseJI GATNNNNATC 1 cut(s) 3536
BseLI CCNNNNNNNGG 5 cut(s) 1037, 1943, 2357, 3026, 3352
BseMI GCAATG 3 cut(s) 1485, 3144, 3501
BseMII CTCAG 7 cut(s) 866, 1197, 1259, 1380, 1542, 1988, 2735
BseNI ACTGG 8 cut(s) 115, 277, 718, 1416, 1886, 1959, 2578, 3360
BseRI GAGGAG 2 cut(s) 693, 876
BseSI GKGCMC 3 cut(s) 424, 1762, 1867
BsgI GTGCAG 3 cut(s) 1421, 2424, 3489
BshFI GGCC 7 cut(s) 161, 752, 1037, 1296, 1525, 1633, 2292
BshNI GGYRCC 2 cut(s) 1862, 3328
BsiHKAI GWGCWC 7 cut(s) 150, 424, 1375, 1466, 1762, 2251, 3367
BsiHKCI CYCGRG 1 cut(s) 1320
BsiSI CCGG 4 cut(s) 21, 1038, 1432, 2289
BslFI GGGAC 1 cut(s) 1263
BslI CCNNNNNNNGG 5 cut(s) 1037, 1943, 2357, 3026, 3352
BsmAI GTCTC 7 cut(s) 22, 788, 858, 1651, 1849, 3076, 3518
BsmFI GGGAC 1 cut(s) 1263
BsmI GAATGC 2 cut(s) 1480, 3172
BsnI GGCC 7 cut(s) 161, 752, 1037, 1296, 1525, 1633, 2292
BsoBI CYCGRG 1 cut(s) 1320
Bsp1720I GCTNAGC 1 cut(s) 1206
Bsp19I CCATGG 1 cut(s) 162
BspACI CCGC 8 cut(s) 363, 645, 753, 981, 1855, 2219, 2568, 2708
BspANI GGCC 7 cut(s) 161, 752, 1037, 1296, 1525, 1633, 2292
BspCNI CTCAG 7 cut(s) 867, 1198, 1258, 1381, 1543, 1989, 2734
BspHI TCATGA 1 cut(s) 387
BspLI GGNNCC 8 cut(s) 718, 1122, 1295, 1548, 1864, 2635, 3272, 3330
BspMAI CTGCAG 5 cut(s) 778, 1915, 2284, 2621, 3196
BspMI ACCTGC 1 cut(s) 250
BspPI GGATC 7 cut(s) 1097, 1541, 1554, 1683, 1711, 2925, 3429
BspT107I GGYRCC 2 cut(s) 1862, 3328
BsrBI CCGCTC 2 cut(s) 365, 981
BsrDI GCAATG 3 cut(s) 1485, 3144, 3501
BsrFI RCCGGY 2 cut(s) 1037, 2288
BsrI ACTGG 8 cut(s) 115, 277, 718, 1416, 1886, 1959, 2578, 3360
BssAI RCCGGY 2 cut(s) 1037, 2288
BssECI CCNNGG 6 cut(s) 162, 339, 925, 1699, 1858, 1897
BssNI GRCGYC 1 cut(s) 3329
BssSI CACGAG 3 cut(s) 417, 3098, 3312
BssT1I CCWWGG 3 cut(s) 162, 1858, 1897
Bst2BI CACGAG 3 cut(s) 417, 3098, 3312
Bst2UI CCWGG 3 cut(s) 341, 1118, 2915
Bst6I CTCTTC 2 cut(s) 2107, 2487
BstACI GRCGYC 1 cut(s) 3329
BstAPI GCANNNNNTGC 4 cut(s) 419, 428, 962, 1766
BstC8I GCNNGC 7 cut(s) 1212, 1568, 1836, 2290, 2434, 2617, 2653
BstDSI CCRYGG 3 cut(s) 162, 925, 1699
BstENI CCTNNNNNAGG 3 cut(s) 2355, 3024, 3350
BstH2I RGCGCY 1 cut(s) 3332
BstHHI GCGC 1 cut(s) 3331
BstMAI GTCTC 7 cut(s) 22, 788, 858, 1651, 1849, 3076, 3518
BstNI CCWGG 3 cut(s) 341, 1118, 2915
BstNSI RCATGY 2 cut(s) 1838, 3578
BstPAI GACNNNNGTC 1 cut(s) 1439
BstSCI CCNGG 3 cut(s) 339, 1116, 2913
BstSFI CTRYAG 7 cut(s) 774, 1314, 1911, 2211, 2280, 2617, 3192
BstSLI GKGCMC 3 cut(s) 424, 1762, 1867
BstX2I RGATCY 3 cut(s) 1546, 1688, 2917
BstYI RGATCY 3 cut(s) 1546, 1688, 2917
Bsu36I CCTNAGG 2 cut(s) 1245, 1551
BsuI GTATCC 3 cut(s) 284, 1941, 2895
BsuRI GGCC 7 cut(s) 161, 752, 1037, 1296, 1525, 1633, 2292
BtgI CCRYGG 3 cut(s) 162, 925, 1699
BtgZI GCGATG 1 cut(s) 1439
BtsI GCAGTG 1 cut(s) 3489
BtsIMutI CAGTG 8 cut(s) 1409, 1893, 1966, 2407, 2994, 3367, 3438, 3489
BveI ACCTGC 1 cut(s) 250
Cac8I GCNNGC 7 cut(s) 1212, 1568, 1836, 2290, 2434, 2617, 2653
CaiI CAGNNNCTG 1 cut(s) 1388
CciI TCATGA 1 cut(s) 387
CfoI GCGC 1 cut(s) 3331
Cfr10I RCCGGY 2 cut(s) 1037, 2288
Cfr13I GGNCC 4 cut(s) 1294, 1523, 2531, 3271
CseI GACGC 1 cut(s) 1388
Csp6I GTAC 5 cut(s) 523, 618, 1902, 2422, 2512
CspCI CAANNNNNGTGG 4 cut(s) 3056, 3091, 3417, 3452
CviQI GTAC 5 cut(s) 523, 618, 1902, 2422, 2512
DinI GGCGCC 1 cut(s) 3330
DrdI GACNNNNNNGTC 1 cut(s) 1665
DriI GACNNNNNGTC 2 cut(s) 2797, 2934
DseDI GACNNNNNNGTC 1 cut(s) 1665
EaeI YGGCCR 1 cut(s) 750
Eam1104I CTCTTC 2 cut(s) 2107, 2487
Eam1105I GACNNNNNGTC 2 cut(s) 2797, 2934
EarI CTCTTC 2 cut(s) 2107, 2487
EciI GGCGGA 1 cut(s) 660
Eco130I CCWWGG 3 cut(s) 162, 1858, 1897
Eco24I GRGCYC 2 cut(s) 2638, 3099
Eco47I GGWCC 2 cut(s) 2531, 3271
Eco57I CTGAAG 1 cut(s) 2511
Eco81I CCTNAGG 2 cut(s) 1245, 1551
Eco88I CYCGRG 1 cut(s) 1320
EcoNI CCTNNNNNAGG 3 cut(s) 2355, 3024, 3350
EcoO109I RGGNCCY 1 cut(s) 2531
EcoRII CCWGG 3 cut(s) 339, 1116, 2913
EcoT14I CCWWGG 3 cut(s) 162, 1858, 1897
EcoT22I ATGCAT 1 cut(s) 3403
EcoT38I GRGCYC 2 cut(s) 2638, 3099
EgeI GGCGCC 1 cut(s) 3330
EheI GGCGCC 1 cut(s) 3330
ErhI CCWWGG 3 cut(s) 162, 1858, 1897
FalI AAGNNNNNCTT 6 cut(s) 1663, 1695, 1833, 1865, 1961, 1993
FaqI GGGAC 1 cut(s) 1263
FauI CCCGC 1 cut(s) 370
FauNDI CATATG 2 cut(s) 1750, 3151
FbaI TGATCA 5 cut(s) 15, 1621, 1990, 2176, 3531
FriOI GRGCYC 2 cut(s) 2638, 3099
GlaI GCGC 1 cut(s) 3330
GsuI CTGGAG 2 cut(s) 132, 2652
HaeII RGCGCY 1 cut(s) 3332
HaeIII GGCC 7 cut(s) 161, 752, 1037, 1296, 1525, 1633, 2292
HapII CCGG 4 cut(s) 21, 1038, 1432, 2289
HgaI GACGC 1 cut(s) 1388
HhaI GCGC 1 cut(s) 3331
Hin1I GRCGYC 1 cut(s) 3329
Hin6I GCGC 1 cut(s) 3329
HinP1I GCGC 1 cut(s) 3329
HincII GTYRAC 3 cut(s) 711, 1429, 2985
HindII GTYRAC 3 cut(s) 711, 1429, 2985
HindIII AAGCTT 1 cut(s) 543
HpaI GTTAAC 1 cut(s) 1429
HpaII CCGG 4 cut(s) 21, 1038, 1432, 2289
HphI GGTGA 6 cut(s) 10, 149, 1052, 1280, 1939, 2512
HpyCH4IV ACGT 3 cut(s) 81, 2673, 2901
HpySE526I ACGT 3 cut(s) 81, 2673, 2901
Hsp92I GRCGYC 1 cut(s) 3329
HspAI GCGC 1 cut(s) 3329
KasI GGCGCC 1 cut(s) 3328
KroI GCCGGC 1 cut(s) 2288
KroNI GCCGGC 1 cut(s) 2290
Ksp22I TGATCA 5 cut(s) 15, 1621, 1990, 2176, 3531
KspAI GTTAAC 1 cut(s) 1429
LmnI GCTCC 6 cut(s) 443, 722, 1556, 1899, 2072, 2633
MaeII ACGT 3 cut(s) 81, 2673, 2901
MaeIII GTNAC 4 cut(s) 1730, 2816, 3029, 3242
MbiI CCGCTC 2 cut(s) 365, 981
MboII GAAGA 7 cut(s) 345, 1199, 1635, 2124, 2504, 2763, 2902
MfeI CAATTG 8 cut(s) 465, 1509, 2193, 2321, 2472, 3068, 3275, 3306
MflI RGATCY 3 cut(s) 1546, 1688, 2917
Mly113I GGCGCC 1 cut(s) 3329
MlyI GAGTC 5 cut(s) 2180, 2804, 2816, 3396, 3507
MmeI TCCRAC 3 cut(s) 2221, 2692, 2941
Mph1103I ATGCAT 1 cut(s) 3403
MroNI GCCGGC 1 cut(s) 2288
MroXI GAANNNNTTC 3 cut(s) 230, 2396, 2761
MseI TTAA 8 cut(s) 321, 1428, 1542, 1685, 2024, 2387, 2538, 3123
MslI CAYNNNNRTG 3 cut(s) 742, 2184, 3579
MspA1I CMGCKG 2 cut(s) 1081, 2708
MspI CCGG 4 cut(s) 21, 1038, 1432, 2289
MspR9I CCNGG 3 cut(s) 341, 1118, 2915
MunI CAATTG 8 cut(s) 465, 1509, 2193, 2321, 2472, 3068, 3275, 3306
Mva1269I GAATGC 2 cut(s) 1480, 3172
MvaI CCWGG 3 cut(s) 341, 1118, 2915
NaeI GCCGGC 1 cut(s) 2290
NarI GGCGCC 1 cut(s) 3329
NcoI CCATGG 1 cut(s) 162
NdeI CATATG 2 cut(s) 1750, 3151
NgoMIV GCCGGC 1 cut(s) 2288
NlaIV GGNNCC 8 cut(s) 718, 1122, 1295, 1548, 1864, 2635, 3272, 3330
NmuCI GTSAC 3 cut(s) 1730, 2816, 3029
NsiI ATGCAT 1 cut(s) 3403
NspI RCATGY 2 cut(s) 1838, 3578
PaeI GCATGC 1 cut(s) 1838
PaeR7I CTCGAG 1 cut(s) 1320
PagI TCATGA 1 cut(s) 387
PctI GAATGC 2 cut(s) 1480, 3172
PdiI GCCGGC 1 cut(s) 2290
PdmI GAANNNNTTC 3 cut(s) 230, 2396, 2761
PfeI GAWTC 7 cut(s) 1385, 1649, 2006, 2397, 3023, 3048, 3377
PflFI GACNNNGTC 1 cut(s) 1058
PfoI TCCNGGA 1 cut(s) 2913
PleI GAGTC 5 cut(s) 2179, 2804, 2816, 3395, 3506
PluTI GGCGCC 1 cut(s) 3332
PpsI GAGTC 5 cut(s) 2179, 2804, 2816, 3395, 3506
PpuMI RGGWCCY 1 cut(s) 2531
PshAI GACNNNNGTC 1 cut(s) 1439
PshBI ATTAAT 1 cut(s) 2024
PsiI TTATAA 3 cut(s) 783, 1574, 2333
Psp5II RGGWCCY 1 cut(s) 2531
Psp6I CCWGG 3 cut(s) 339, 1116, 2913
PspGI CCWGG 3 cut(s) 339, 1116, 2913
PspN4I GGNNCC 8 cut(s) 718, 1122, 1295, 1548, 1864, 2635, 3272, 3330
PspPI GGNCC 4 cut(s) 1294, 1523, 2531, 3271
PspPPI RGGWCCY 1 cut(s) 2531
PspXI VCTCGAGB 1 cut(s) 1320
PstI CTGCAG 5 cut(s) 778, 1915, 2284, 2621, 3196
PstNI CAGNNNCTG 1 cut(s) 1388
PsuI RGATCY 3 cut(s) 1546, 1688, 2917
PsyI GACNNNGTC 1 cut(s) 1058
PvuII CAGCTG 1 cut(s) 1081
RsaI GTAC 5 cut(s) 524, 619, 1903, 2423, 2513
RsaNI GTAC 5 cut(s) 523, 618, 1902, 2422, 2512
RseI CAYNNNNRTG 3 cut(s) 742, 2184, 3579
SaqAI TTAA 8 cut(s) 321, 1428, 1542, 1685, 2024, 2387, 2538, 3123
Sau96I GGNCC 4 cut(s) 1294, 1523, 2531, 3271
SchI GAGTC 5 cut(s) 2180, 2804, 2816, 3396, 3507
ScrFI CCNGG 3 cut(s) 341, 1118, 2915
SfcI CTRYAG 7 cut(s) 774, 1314, 1911, 2211, 2280, 2617, 3192
SfoI GGCGCC 1 cut(s) 3330
Sfr274I CTCGAG 1 cut(s) 1320
SinI GGWCC 2 cut(s) 2531, 3271
SlaI CTCGAG 1 cut(s) 1320
SmiMI CAYNNNNRTG 3 cut(s) 742, 2184, 3579
SmlI CTYRAG 3 cut(s) 203, 1320, 1459
SmoI CTYRAG 3 cut(s) 203, 1320, 1459
SphI GCATGC 1 cut(s) 1838
SsiI CCGC 8 cut(s) 363, 645, 753, 981, 1855, 2219, 2568, 2708
SspDI GGCGCC 1 cut(s) 3328
SspI AATATT 2 cut(s) 69, 1156
StyD4I CCNGG 3 cut(s) 339, 1116, 2913
StyI CCWWGG 3 cut(s) 162, 1858, 1897
TaiI ACGT 3 cut(s) 84, 2676, 2904
TaqI TCGA 7 cut(s) 1321, 1501, 2119, 2726, 3051, 3424, 3455
TatI WGTACW 2 cut(s) 522, 617
TauI GCSGC 3 cut(s) 755, 1857, 2222
TfiI GAWTC 7 cut(s) 1385, 1649, 2006, 2397, 3023, 3048, 3377
Tru1I TTAA 8 cut(s) 321, 1428, 1542, 1685, 2024, 2387, 2538, 3123
Tru9I TTAA 8 cut(s) 321, 1428, 1542, 1685, 2024, 2387, 2538, 3123
TscAI CASTG 8 cut(s) 1416, 1893, 1966, 2407, 2994, 3367, 3438, 3489
TseFI GTSAC 3 cut(s) 1730, 2816, 3029
Tsp45I GTSAC 3 cut(s) 1730, 2816, 3029
TspDTI ATGAA 6 cut(s) 223, 875, 927, 1219, 2405, 3211
TspGWI ACGGA 1 cut(s) 914
TspRI CASTG 8 cut(s) 1416, 1893, 1966, 2407, 2994, 3367, 3438, 3489
Tth111I GACNNNGTC 1 cut(s) 1058
VneI GTGCAC 2 cut(s) 420, 1758
VpaK11BI GGWCC 2 cut(s) 2531, 3271
VspI ATTAAT 1 cut(s) 2024
XagI CCTNNNNNAGG 3 cut(s) 2355, 3024, 3350
XapI RAATTY 3 cut(s) 1226, 1344, 2663
XbaI TCTAGA 1 cut(s) 1354
XceI RCATGY 2 cut(s) 1838, 3578
XcmI CCANNNNNNNNNTGG 1 cut(s) 3281
XhoI CTCGAG 1 cut(s) 1320
XmaJI CCTAGG 1 cut(s) 1858
XmnI GAANNNNTTC 3 cut(s) 230, 2396, 2761
Zsp2I ATGCAT 1 cut(s) 3403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.