Rw4G024060

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Forward (+)
49942562 .. 49955214
12653 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G024060.1

Sequence Viewer

Length: 3783 bp
ATGGCTGAGGAGAATCCTTCAGATGGAGATGCAATAACAGAGCAAGAAACTCCAACAAATAGCCATCCAACAGTGATGGTGGGTTCCAACGAAAACAGACTAGATACAAGCAAGAGCAAGGAGGATGGAACTAAAACAGTTCCACTCTACAAACTTTTCTCTTTTGCTGATTCCATGGATTACCTGTTAATGTCTGTTGGTACAATCAGCGCTATTGGTAATGGACTCTGTATGCCTCTAATGGCCATAGTCTTTGGAGATCTACTTACTTCTTTTTTAGAAACTGGGAATAACAAGAGAGTGGCTGATGCAGTTTCCAAGGTGGCTCTAAAGTATGTTTACTTGGCTCTTGGGGGTGCTGCTGCAGCATTTCTACAGATGTCATGCTGGATGGTCACCGGAGAGAGACAGGCTGCACGATTACGAAGTTTATACTTGGAGACCATACTGAGGCAAGATGTCAGCTATTTTGATCAAGAAATCAACTTTGGAGAAATTGTTGGGAGGATGTCAGGTGATACTCTGCTCATTAAAGAGGCGATGGGTGAGAAGGTAGGAACTTTTATCCAAGTGGTTGCAACATTCACAGGCAGCTATATTATAGCATTTTTTAAGGGATGGCTTCTCACCCTTGTCATGATATCCTCTATTCCCCCTGTTGTCTTCTCTGGTGCTGTCATGAACCATTTCATAGTGAAATTGGCATCCAATGGACAAGCAGCATATTCAGGAGGAGCAACTGTGGTAGAGGAGACAATTGGTTCTATCAGAACTGTTGCATCGTTCACAGGGGAGAAGCAAGCTATATCTAACTACAATAATTCCTTGAATAAAGCTTACAAGTCCGGTGTGCAAGAGGGTTGGGCATCTGGTTTGGGTTCTGGTGCACTTAGGCTTATGGTATTCTGTACTTATGCTTTGGCTGTATGGTTTGGTGGAATAATGATACTTCAAAAAGGATACAAGGGAGGAGATGTCATGACAGTAATTTTTGCTGTGTTGATGGGCTCTCTGTCTCTTGGGAAAGCATCTCCTTGCATCAGTGCATTTACTCCTGGACAAGCTGCAGCTTATAAGATGTTTGAGACAATTAACAGAAAGCCCGAGATAGATGCATATGATACTACTGGGAGGCTATTACAAGATATTCGTGGAGACATAGAACTGAGGGATGTTTGTTTTAGTTATCCCACAAGACTGGATGAGAAAATATTCCATGGATTTTGTGTCTCAATACCTAGTGGTGCAACTGCTGCTTTGGTTGGAGAAAGCGGAAGTGGTAAATCTACTGTACTCAGTTTGATTGAGAGATTTTATGACCCCCAGGCTGGTGAATTCCAACTGAAATGGATCAGACAGAAAATAGGCCTTGTAAACCAGGAACCAGTTTTGTTTACTGGTAGCATTAAAGATAATATTGCGTTTGGAAAGGATGGTGCTACTACTGAAGAGATAGCAACTGCTGCTGAGCTTGCCAATGCTGCAAAATTCATAGCTTTACTGCCTCAGGGAATAGATACCTTGGTTGGTGAGCATGGAACTCAGCTATCTGGGGGGCAAAAGCAAAGAGTTGCTATAGCCAGAGCAATTCTGAAGAACCCAAGAATTCTACTTTTAGATGAAGCGACAAGCGCACTTGACACAAAATCCGAGAGAACTGTGCAGGAGGCGCTGGACAGAGTAATGATTAACCGGACTACTGTCATAGTAGCCCACCGCTTGAGCACAGTAAGGAATGCCGACACCATTGCTGTAATACATCAGGGAATAATTGCTGCGAAAGGACCACATTCTGAGCTAAGCAGGGATCCCGATGGAGCATATAGCAGGCTTATAAGGTTGCAAGAAACTAGTTCTGTGTCAGAACACTCGGAACATACTTGTCTAAGTTCTGAGAAATCATCTCCAAGAAGTGGTAGTCGTCACTCATTCTCAATCTCATATGGTATTCCTAATGCAAGCGGTTTCCGTGAAACAACAGCTGTAGAACCTGACGTTCCTGCTTCAGTACCAACCAAAGGGCCTCCAGCAGTCTCTCTTCGCCGCGTTGCTTACCTGAACAAGCCAGAGATACCAGTGCTACTTCTAGGTACTATAGTTGCAGCTGTCAATGGGGTAATCTTCCCTGTTTATGGTAGTTTGTTGTCAAGTGTAATCAAGACCTTCTTTGAGCCACCCCATGAACTTCGTAAGCATTCAAAGTTTTTGGCATCAATCTTTGTTATTCTTGGAGTGGTATCTTTCTTGGCACAATCGTCAAGAGCACACCTCTTTGCCGTGGCGAGCTGCAGGTTAATTAGAAGAGTCCGCACAATGTGCTTTGAGAAGGTGGTTTACATGCAAGTAAGTTGGTTTGATGAAGCTGAGCACTCAAGTGGTGCCATTGGGGCAAGGCTTTCTATAGATGCAGCGTCTTTGAGAGGGCTTGTTGGAGATGCTCTTGGTTTGGTGGTTGAGAATACGGCAGCAGCGATAATGGGGGTGATTATTGCTTTTGGTGCAAATTGGCAACTTTCTCTTGTAATCCTTGTTCTGTTACCTTTATTGGGAATAAACGGATATCTTCAAGACCAGTACATGAAAGGATTCAGTGCAGATGCAAAGAAATTGTACGAGGACGCAAGCCAAGTAGCTAGTGATGCTGTGGGGAGTATTCGGACAGTTGCTTCCTTTTGTGCTGAAGAGAAGATGATTGAGTTGTACAAGAAAAAATGTGAAAGCCCTATTAAGACAGGGATAAGACAAGGTTTAGTTTCTGGGATAGGTTTTGGGGTATCACACTTTTTACTGTTTTCAGCGTTTGCCTTAATATTTTACACTGGTGGTCTACTTGTTGCAGCAGGCAAGACAACAGCCTCTGCTGTTTTCAGGGCTGTCTTTGCTCTCACTATTGCTTCTTTTGGACTTGCTCAGTCGAGCTCCCTAGCAACTGATGTTAGTAAAGGAAAGAGCTCTGCTGCTTCCATATTCGAACTTCTTGACCTGAAATCAAAAATAGACTCTAGTGATAACTCGGGCATGACAATAGAAAATGTGAAGGGAGAACTTGAATTTCACCATGTCAATTTCAAGTATCCTAGTAGACCTAACGTGCCAATTTTCAACGATCTGTGCTTGACCATTAGTCATGGCGAGACAATTGCTCTGGTTGGTGAAAGTGGAAGTGGAAAATCGACAGTAATCTCTTTGATCCAGAGATTTTACGATCCTGATTCAGGTCACATTACATTGGATGGTATCGTAATTCAGAAACTAGAGTTGAGGTGGTTGAGACAGCAAATGGGGCTGGTGAGCCAGGAGCCTCTGCTGTTTAATGACACGATCCAAGCCAACATTGCATATGGAAAGGAAGGAGAGACAACCGAGGCTGAAATTATAGCTGCAGCAGAACTGGCAAATGCACACGAGTTCATTAGCAGTTTACAACATGGTTATGATACAATAGTAGGAGAGCGAGGGGTCCAATTGTCCGGTGGACAGAAGCAAAGAGTTGCTATTGCACGAGCTATTATGAAGGCACCTAAGATATTACTACTTGATGAAGCCACCAGTGCTCTTGATGCTGAATCCGAACGAGTGGTTCAAGATGCACTGGACCGAGTTATTGTGGATCGAACCACAGTGGTTGTTGCCCATCGGTTATCCACAATAAAAGGTGCAGATTTAATTGCTGTGGTAAAAAATGGAGTCGTTGCAGAGGAAGGAAAGCATGAAACTTTGATCAATATCCGCAATGGCATTTATGCATCTTTGGTAGCATTGCATTCAAGTGCCTCAACTTAA

Protein Analysis

1260

Amino Acids

135.4

Weight (kDa)

6.36

Isoelectric Point (pI)

32.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 66 - 338 2e-59 ABC transporter transmembrane region
ABC_tran PF00005 410 - 544 7.3e-28 ABC transporter
ABC_membrane PF00664 694 - 965 1.3e-49 ABC transporter transmembrane region
ABC_tran PF00005 1035 - 1184 2e-34 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1074, 1835
Acc36I ACCTGC 1 cut(s) 2280
AccB1I GGYRCC 2 cut(s) 2378, 3517
AccB7I CCANNNNNTGG 1 cut(s) 1913
AccI GTMKAC 2 cut(s) 2827, 3082
AccII CGCG 1 cut(s) 2046
AciI CCGC 6 cut(s) 1272, 1717, 1962, 2044, 2308, 3730
AclWI GGATC 7 cut(s) 1358, 1802, 1815, 3184, 3200, 3316, 3618
AcoI YGGCCR 1 cut(s) 243
AcsI RAATTY 4 cut(s) 1334, 1487, 1605, 3050
AcuI CTGAAG 4 cut(s) 1467, 1613, 1989, 2700
AdeI CACNNNGTG 1 cut(s) 2316
AfaI GTAC 8 cut(s) 202, 910, 1293, 2010, 2092, 2576, 2612, 2702
AfeI AGCGCT 1 cut(s) 211
AfiI CCNNNNNNNGG 8 cut(s) 23, 450, 1328, 1913, 2018, 2132, 2546, 3215
AgsI TTSAA 9 cut(s) 829, 953, 2199, 2567, 3050, 3070, 3103, 3584, 3768
AhdI GACNNNNNGTC 1 cut(s) 3123
AhlI ACTAGT 1 cut(s) 1850
AjnI CCWGG 4 cut(s) 1054, 1323, 1377, 3294
AjuI GAANNNNNNNTTGG 2 cut(s) 471, 503
AleI CACNNNNGTG 1 cut(s) 2373
Alw21I GWGCWC 7 cut(s) 889, 1727, 2266, 2370, 2921, 2954, 3556
Alw44I GTGCAC 1 cut(s) 885
AlwI GGATC 7 cut(s) 1358, 1802, 1815, 3184, 3200, 3316, 3618
AlwNI CAGNNNCTG 1 cut(s) 2858
Ama87I CYCGRG 2 cut(s) 1103, 3013
Aor51HI AGCGCT 1 cut(s) 211
AoxI GGCC 3 cut(s) 243, 1366, 2021
ApaLI GTGCAC 1 cut(s) 885
ApoI RAATTY 4 cut(s) 1334, 1487, 1605, 3050
Asp700I GAANNNNTTC 3 cut(s) 686, 1211, 2585
AspLEI GCGC 3 cut(s) 212, 1634, 1672
AspS9I GGNCC 4 cut(s) 1784, 2021, 3460, 3595
AsuII TTCGAA 1 cut(s) 2970
AvaI CYCGRG 2 cut(s) 1103, 3013
AvaII GGWCC 3 cut(s) 1784, 3460, 3595
AxyI CCTNAGG 1 cut(s) 1506
BaeGI GKGCMC 1 cut(s) 889
BaeI ACNNNNGTAYC 6 cut(s) 1509, 1542, 2082, 2115, 3429, 3462
BalI TGGCCA 1 cut(s) 245
BamHI GGATCC 1 cut(s) 1807
BanI GGYRCC 2 cut(s) 2378, 3517
BanII GRGCYC 3 cut(s) 1010, 2921, 2954
BarI GAAGNNNNNNTAC 2 cut(s) 2318, 2350
BauI CACGAG 2 cut(s) 3404, 3501
BbsI GAAGAC 1 cut(s) 655
Bbv12I GWGCWC 7 cut(s) 889, 1727, 2266, 2370, 2921, 2954, 3556
BbvCI CCTCAGC 1 cut(s) 6
BceAI ACGGC 2 cut(s) 2261, 2478
BcgI CGANNNNNNTGC 6 cut(s) 1094, 1128, 1730, 1764, 3122, 3156
BciT130I CCWGG 4 cut(s) 1056, 1325, 1379, 3296
BciVI GTATCC 2 cut(s) 953, 3084
BclI TGATCA 2 cut(s) 472, 3720
BcuI ACTAGT 1 cut(s) 1850
BfaI CTAG 9 cut(s) 101, 1239, 1851, 2087, 2634, 2924, 3003, 3078, 3254
BfmI CTRYAG 9 cut(s) 363, 374, 1065, 1575, 1983, 2094, 2287, 2400, 3381
BfoI RGCGCY 2 cut(s) 213, 1673
BfuAI ACCTGC 1 cut(s) 2280
BfuI GTATCC 2 cut(s) 953, 3084
BglI GCCNNNNNGGC 1 cut(s) 2387
BglII AGATCT 1 cut(s) 259
BlpI GCTNAGC 3 cut(s) 1467, 1799, 2364
Bme1390I CCNGG 4 cut(s) 1056, 1325, 1379, 3296
Bme18I GGWCC 3 cut(s) 1784, 3460, 3595
BmeRI GACNNNNNGTC 1 cut(s) 3123
BmeT110I CYCGRG 2 cut(s) 1103, 3013
BmgT120I GGNCC 4 cut(s) 1784, 2021, 3460, 3595
BmiI GGNNCC 7 cut(s) 85, 1383, 1809, 2380, 3300, 3461, 3519
BmrFI CCNGG 4 cut(s) 1056, 1325, 1379, 3296
BmrI ACTGGG 2 cut(s) 294, 1137
BmuI ACTGGG 2 cut(s) 294, 1137
BoxI GACNNNNGTC 1 cut(s) 1700
BpiI GAAGAC 1 cut(s) 655
BplI GAGNNNNNCTC 2 cut(s) 2253, 2285
BpmI CTGGAG 1 cut(s) 2010
Bpu10I CCTNAGC 1 cut(s) 6
Bpu1102I GCTNAGC 3 cut(s) 1467, 1799, 2364
Bpu14I TTCGAA 1 cut(s) 2970
BpuEI CTTGAG 2 cut(s) 1741, 2356
BsaBI GATNNNNATC 1 cut(s) 3725
BsaI GGTCTC 1 cut(s) 434
BsaJI CCNNGG 7 cut(s) 174, 318, 1216, 1323, 1521, 2277, 3363
BsaWI WCCGGW 4 cut(s) 398, 845, 1692, 3470
BsaXI ACNNNNNCTCC 6 cut(s) 483, 513, 726, 756, 960, 990
Bsc4I CCNNNNNNNGG 8 cut(s) 23, 450, 1328, 1913, 2018, 2132, 2546, 3215
Bse21I CCTNAGG 1 cut(s) 1506
Bse3DI GCAATG 4 cut(s) 1746, 3333, 3739, 3758
Bse8I GATNNNNATC 1 cut(s) 3725
BseBI CCWGG 4 cut(s) 1056, 1325, 1379, 3296
BseDI CCNNGG 7 cut(s) 174, 318, 1216, 1323, 1521, 2277, 3363
BseJI GATNNNNATC 1 cut(s) 3725
BseLI CCNNNNNNNGG 8 cut(s) 23, 450, 1328, 1913, 2018, 2132, 2546, 3215
BseMI GCAATG 4 cut(s) 1746, 3333, 3739, 3758
BseRI GAGGAG 4 cut(s) 23, 747, 764, 984
BseSI GKGCMC 1 cut(s) 889
BsgI GTGCAG 4 cut(s) 399, 1682, 2613, 3678
Bsh1236I CGCG 1 cut(s) 2046
BshFI GGCC 3 cut(s) 245, 1368, 2023
BshNI GGYRCC 2 cut(s) 2378, 3517
BsiHKAI GWGCWC 7 cut(s) 889, 1727, 2266, 2370, 2921, 2954, 3556
BsiHKCI CYCGRG 2 cut(s) 1103, 3013
BsiSI CCGG 4 cut(s) 399, 846, 1693, 3471
BslI CCNNNNNNNGG 8 cut(s) 23, 450, 1328, 1913, 2018, 2132, 2546, 3215
BsmI GAATGC 3 cut(s) 1741, 2194, 3763
BsnI GGCC 3 cut(s) 245, 1368, 2023
Bso31I GGTCTC 1 cut(s) 434
BsoBI CYCGRG 2 cut(s) 1103, 3013
Bsp119I TTCGAA 1 cut(s) 2970
Bsp1286I GDGCHC 8 cut(s) 889, 1010, 1727, 2266, 2370, 2921, 2954, 3556
Bsp1407I TGTACA 1 cut(s) 2700
Bsp1720I GCTNAGC 3 cut(s) 1467, 1799, 2364
Bsp19I CCATGG 2 cut(s) 174, 1216
BspACI CCGC 6 cut(s) 1272, 1717, 1962, 2044, 2308, 3730
BspANI GGCC 3 cut(s) 245, 1368, 2023
BspFNI CGCG 1 cut(s) 2046
BspHI TCATGA 3 cut(s) 636, 678, 978
BspLI GGNNCC 7 cut(s) 85, 1383, 1809, 2380, 3300, 3461, 3519
BspMAI CTGCAG 4 cut(s) 367, 1069, 2291, 3385
BspMI ACCTGC 1 cut(s) 2280
BspPI GGATC 7 cut(s) 1358, 1802, 1815, 3184, 3200, 3316, 3618
BspT104I TTCGAA 1 cut(s) 2970
BspT107I GGYRCC 2 cut(s) 2378, 3517
BspTNI GGTCTC 1 cut(s) 434
BsrDI GCAATG 4 cut(s) 1746, 3333, 3739, 3758
BsrGI TGTACA 1 cut(s) 2700
BssECI CCNNGG 7 cut(s) 174, 318, 1216, 1323, 1521, 2277, 3363
BssSI CACGAG 2 cut(s) 3404, 3501
BssT1I CCWWGG 4 cut(s) 174, 318, 1216, 1521
Bst2BI CACGAG 2 cut(s) 3404, 3501
Bst2UI CCWGG 4 cut(s) 1056, 1325, 1379, 3296
Bst6I CTCTTC 4 cut(s) 1443, 2043, 2296, 2676
BstAPI GCANNNNNTGC 3 cut(s) 1253, 1463, 2316
BstAUI TGTACA 1 cut(s) 2700
BstBI TTCGAA 1 cut(s) 2970
BstC8I GCNNGC 7 cut(s) 801, 1473, 1829, 1960, 2284, 2623, 2842
BstDSI CCRYGG 3 cut(s) 174, 1216, 2277
BstEII GGTNACC 1 cut(s) 394
BstENI CCTNNNNNAGG 1 cut(s) 3213
BstFNI CGCG 1 cut(s) 2046
BstH2I RGCGCY 2 cut(s) 213, 1673
BstHHI GCGC 3 cut(s) 212, 1634, 1672
BstNI CCWGG 4 cut(s) 1056, 1325, 1379, 3296
BstNSI RCATGY 1 cut(s) 2341
BstPAI GACNNNNGTC 1 cut(s) 1700
BstPI GGTNACC 1 cut(s) 394
BstSCI CCNGG 4 cut(s) 1054, 1323, 1377, 3294
BstSFI CTRYAG 9 cut(s) 363, 374, 1065, 1575, 1983, 2094, 2287, 2400, 3381
BstSLI GKGCMC 1 cut(s) 889
BstUI CGCG 1 cut(s) 2046
BstV2I GAAGAC 1 cut(s) 655
BstX2I RGATCY 2 cut(s) 259, 1807
BstXI CCANNNNNNTGG 1 cut(s) 1198
BstYI RGATCY 2 cut(s) 259, 1807
Bsu36I CCTNAGG 1 cut(s) 1506
BsuI GTATCC 2 cut(s) 953, 3084
BsuRI GGCC 3 cut(s) 245, 1368, 2023
BtgI CCRYGG 3 cut(s) 174, 1216, 2277
BtgZI GCGATG 1 cut(s) 554
BtsIMutI CAGTG 8 cut(s) 78, 1048, 2082, 2596, 2817, 3556, 3590, 3627
BveI ACCTGC 1 cut(s) 2280
Cac8I GCNNGC 7 cut(s) 801, 1473, 1829, 1960, 2284, 2623, 2842
CaiI CAGNNNCTG 1 cut(s) 2858
CciI TCATGA 3 cut(s) 636, 678, 978
CfoI GCGC 3 cut(s) 212, 1634, 1672
Cfr13I GGNCC 4 cut(s) 1784, 2021, 3460, 3595
CseI GACGC 2 cut(s) 2400, 2627
Csp6I GTAC 8 cut(s) 201, 909, 1292, 2009, 2091, 2575, 2611, 2701
CspCI CAANNNNNGTGG 2 cut(s) 3607, 3642
CviQI GTAC 8 cut(s) 201, 909, 1292, 2009, 2091, 2575, 2611, 2701
DraIII CACNNNGTG 1 cut(s) 2316
DriI GACNNNNNGTC 1 cut(s) 3123
EaeI YGGCCR 1 cut(s) 243
Eam1104I CTCTTC 4 cut(s) 1443, 2043, 2296, 2676
Eam1105I GACNNNNNGTC 1 cut(s) 3123
EarI CTCTTC 4 cut(s) 1443, 2043, 2296, 2676
Ecl136II GAGCTC 2 cut(s) 2919, 2952
Eco130I CCWWGG 4 cut(s) 174, 318, 1216, 1521
Eco147I AGGCCT 1 cut(s) 1368
Eco24I GRGCYC 3 cut(s) 1010, 2921, 2954
Eco31I GGTCTC 1 cut(s) 434
Eco32I GATATC 2 cut(s) 642, 2561
Eco47I GGWCC 3 cut(s) 1784, 3460, 3595
Eco47III AGCGCT 1 cut(s) 211
Eco53kI GAGCTC 2 cut(s) 2919, 2952
Eco57I CTGAAG 4 cut(s) 1467, 1613, 1989, 2700
Eco81I CCTNAGG 1 cut(s) 1506
Eco88I CYCGRG 2 cut(s) 1103, 3013
Eco91I GGTNACC 1 cut(s) 394
EcoICRI GAGCTC 2 cut(s) 2919, 2952
EcoNI CCTNNNNNAGG 1 cut(s) 3213
EcoO109I RGGNCCY 1 cut(s) 2021
EcoO65I GGTNACC 1 cut(s) 394
EcoRI GAATTC 2 cut(s) 1334, 1605
EcoRII CCWGG 4 cut(s) 1054, 1323, 1377, 3294
EcoRV GATATC 2 cut(s) 642, 2561
EcoT14I CCWWGG 4 cut(s) 174, 318, 1216, 1521
EcoT22I ATGCAT 2 cut(s) 1117, 3748
EcoT38I GRGCYC 3 cut(s) 1010, 2921, 2954
ErhI CCWWGG 4 cut(s) 174, 318, 1216, 1521
FalI AAGNNNNNCTT 2 cut(s) 2150, 2182
FauNDI CATATG 3 cut(s) 1117, 1942, 3340
FbaI TGATCA 2 cut(s) 472, 3720
FblI GTMKAC 2 cut(s) 2827, 3082
FriOI GRGCYC 3 cut(s) 1010, 2921, 2954
FspBI CTAG 9 cut(s) 101, 1239, 1851, 2087, 2634, 2924, 3003, 3078, 3254
GlaI GCGC 3 cut(s) 211, 1633, 1671
GsuI CTGGAG 1 cut(s) 2010
HaeII RGCGCY 2 cut(s) 213, 1673
HaeIII GGCC 3 cut(s) 245, 1368, 2023
HapII CCGG 4 cut(s) 399, 846, 1693, 3471
HgaI GACGC 2 cut(s) 2400, 2627
HhaI GCGC 3 cut(s) 212, 1634, 1672
Hin6I GCGC 3 cut(s) 210, 1632, 1670
HinP1I GCGC 3 cut(s) 210, 1632, 1670
HindIII AAGCTT 1 cut(s) 834
HinfI GANTC 9 cut(s) 13, 170, 225, 2304, 2586, 2999, 3212, 3566, 3687
HpaII CCGG 4 cut(s) 399, 846, 1693, 3471
HpyAV CCTTC 8 cut(s) 27, 544, 2173, 2320, 3031, 3344, 3508, 3695
HpyCH4IV ACGT 2 cut(s) 1995, 3090
HpySE526I ACGT 2 cut(s) 1995, 3090
HspAI GCGC 3 cut(s) 210, 1632, 1670
Ksp22I TGATCA 2 cut(s) 472, 3720
LmnI GCTCC 4 cut(s) 734, 1817, 2924, 3298
MaeI CTAG 9 cut(s) 101, 1239, 1851, 2087, 2634, 2924, 3003, 3078, 3254
MaeII ACGT 2 cut(s) 1995, 3090
MaeIII GTNAC 4 cut(s) 394, 1922, 2535, 3218
MboII GAAGA 9 cut(s) 655, 1460, 1606, 2030, 2113, 2313, 2555, 2693, 2698
MfeI CAATTG 3 cut(s) 756, 3138, 3464
MflI RGATCY 2 cut(s) 259, 1807
MhlI GDGCHC 8 cut(s) 889, 1010, 1727, 2266, 2370, 2921, 2954, 3556
MlsI TGGCCA 1 cut(s) 245
MluNI TGGCCA 1 cut(s) 245
MlyI GAGTC 4 cut(s) 219, 2313, 2993, 3696
MmeI TCCRAC 6 cut(s) 77, 92, 111, 1243, 1363, 2410
Mox20I TGGCCA 1 cut(s) 245
Mph1103I ATGCAT 2 cut(s) 1117, 3748
MroXI GAANNNNTTC 3 cut(s) 686, 1211, 2585
MscI TGGCCA 1 cut(s) 245
MslI CAYNNNNRTG 3 cut(s) 2373, 3432, 3768
Msp20I TGGCCA 1 cut(s) 245
MspA1I CMGCKG 2 cut(s) 1982, 2105
MspI CCGG 4 cut(s) 399, 846, 1693, 3471
MspR9I CCNGG 4 cut(s) 1056, 1325, 1379, 3296
MunI CAATTG 3 cut(s) 756, 3138, 3464
Mva1269I GAATGC 3 cut(s) 1741, 2194, 3763
MvaI CCWGG 4 cut(s) 1056, 1325, 1379, 3296
MvnI CGCG 1 cut(s) 2046
NcoI CCATGG 2 cut(s) 174, 1216
NdeI CATATG 3 cut(s) 1117, 1942, 3340
NlaIV GGNNCC 7 cut(s) 85, 1383, 1809, 2380, 3300, 3461, 3519
NmuCI GTSAC 3 cut(s) 394, 1922, 3218
NsiI ATGCAT 2 cut(s) 1117, 3748
NspI RCATGY 1 cut(s) 2341
NspV TTCGAA 1 cut(s) 2970
OliI CACNNNNGTG 1 cut(s) 2373
PagI TCATGA 3 cut(s) 636, 678, 978
PceI AGGCCT 1 cut(s) 1368
PcsI WCGNNNNNNNCGW 1 cut(s) 2468
PctI GAATGC 3 cut(s) 1741, 2194, 3763
PdmI GAANNNNTTC 3 cut(s) 686, 1211, 2585
PfeI GAWTC 5 cut(s) 13, 170, 2586, 3212, 3566
PflMI CCANNNNNTGG 1 cut(s) 1913
PfoI TCCNGGA 1 cut(s) 1054
PleI GAGTC 4 cut(s) 219, 2312, 2993, 3695
PpsI GAGTC 4 cut(s) 219, 2312, 2993, 3695
PshAI GACNNNNGTC 1 cut(s) 1700
PsiI TTATAA 2 cut(s) 1074, 1835
Psp124BI GAGCTC 2 cut(s) 2921, 2954
Psp6I CCWGG 4 cut(s) 1054, 1323, 1377, 3294
PspEI GGTNACC 1 cut(s) 394
PspGI CCWGG 4 cut(s) 1054, 1323, 1377, 3294
PspN4I GGNNCC 7 cut(s) 85, 1383, 1809, 2380, 3300, 3461, 3519
PspPI GGNCC 4 cut(s) 1784, 2021, 3460, 3595
PsrI GAACNNNNNNTAC 2 cut(s) 2514, 2546
PstI CTGCAG 4 cut(s) 367, 1069, 2291, 3385
PstNI CAGNNNCTG 1 cut(s) 2858
PsuI RGATCY 2 cut(s) 259, 1807
PvuII CAGCTG 2 cut(s) 1982, 2105
RsaI GTAC 8 cut(s) 202, 910, 1293, 2010, 2092, 2576, 2612, 2702
RsaNI GTAC 8 cut(s) 201, 909, 1292, 2009, 2091, 2575, 2611, 2701
RseI CAYNNNNRTG 3 cut(s) 2373, 3432, 3768
SacI GAGCTC 2 cut(s) 2921, 2954
Sau96I GGNCC 4 cut(s) 1784, 2021, 3460, 3595
SchI GAGTC 4 cut(s) 219, 2313, 2993, 3696
ScrFI CCNGG 4 cut(s) 1056, 1325, 1379, 3296
SduI GDGCHC 8 cut(s) 889, 1010, 1727, 2266, 2370, 2921, 2954, 3556
SfcI CTRYAG 9 cut(s) 363, 374, 1065, 1575, 1983, 2094, 2287, 2400, 3381
SfuI TTCGAA 1 cut(s) 2970
SinI GGWCC 3 cut(s) 1784, 3460, 3595
SmiMI CAYNNNNRTG 3 cut(s) 2373, 3432, 3768
SmlI CTYRAG 2 cut(s) 1720, 2371
SmoI CTYRAG 2 cut(s) 1720, 2371
SpeI ACTAGT 1 cut(s) 1850
SseBI AGGCCT 1 cut(s) 1368
SsiI CCGC 6 cut(s) 1272, 1717, 1962, 2044, 2308, 3730
SspI AATATT 3 cut(s) 1212, 1417, 2811
SspMI CTAG 9 cut(s) 101, 1239, 1851, 2087, 2634, 2924, 3003, 3078, 3254
SstI GAGCTC 2 cut(s) 2921, 2954
StuI AGGCCT 1 cut(s) 1368
StyD4I CCNGG 4 cut(s) 1054, 1323, 1377, 3294
StyI CCWWGG 4 cut(s) 174, 318, 1216, 1521
TaiI ACGT 2 cut(s) 1998, 3093
TaqI TCGA 4 cut(s) 2915, 2970, 3173, 3613
TaqII GACCGA 1 cut(s) 3612
TatI WGTACW 4 cut(s) 908, 1291, 2574, 2700
TauI GCSGC 1 cut(s) 2046
TfiI GAWTC 5 cut(s) 13, 170, 2586, 3212, 3566
TscAI CASTG 8 cut(s) 78, 1048, 2082, 2596, 2824, 3556, 3597, 3627
TseFI GTSAC 3 cut(s) 394, 1922, 3218
Tsp45I GTSAC 3 cut(s) 394, 1922, 3218
TspGWI ACGGA 2 cut(s) 1958, 2571
TspRI CASTG 8 cut(s) 78, 1048, 2082, 2596, 2824, 3556, 3597, 3627
Van91I CCANNNNNTGG 1 cut(s) 1913
VneI GTGCAC 1 cut(s) 885
VpaK11BI GGWCC 3 cut(s) 1784, 3460, 3595
XagI CCTNNNNNAGG 1 cut(s) 3213
XapI RAATTY 4 cut(s) 1334, 1487, 1605, 3050
XceI RCATGY 1 cut(s) 2341
XcmI CCANNNNNNNNNTGG 1 cut(s) 3470
XmiI GTMKAC 2 cut(s) 2827, 3082
XmnI GAANNNNTTC 3 cut(s) 686, 1211, 2585
XspI CTAG 9 cut(s) 101, 1239, 1851, 2087, 2634, 2924, 3003, 3078, 3254
Zsp2I ATGCAT 2 cut(s) 1117, 3748
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.