MD16G1134500.v1.1

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Reverse (-)
10325163 .. 10330695
5533 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1134500.v1.1.491

Sequence Viewer

Length: 3801 bp
ATGGCGGAAGATGAAGATGTAATCAAGAAGCAGGTCACGGCAACATCCAAAGGCCACTCAGCGGTGGAGGATTCCCAAAACAGCAAGAAAGATACGAGCAAGAACAAGGAGGATGGCACCAAAACAGTACCATTTCACAAGCTTTTCTCCTTTGCAGATACCTTGGATTACATGTTAATGTCTGTTGGTACAATCAGTGCCATTGGAAATGGGCTCTGTACGCCTCTAATGACCATAATCTTGGGAGAGGTGATTAATTCTTTTGGAGGAACTGGGAATACCAAAGAAGTGGTGGATGCAGTCTCCAAGAAAGAACTTGGCTTATCGGAGATAACCAGGGTTTTCTATGTGCCAGAGGTATCTTGCTGGATGATTACGGGTGAAAGACAAGCTGCACGAATAAGGAGTTTATACTTGAAAACGATATTGAGGCAAGATGTCGGCTTCTTCGATACAGAAACGAACACTGGGGAAATTGTTGGGAGGATGTCGGGTGATACTGTGCTCATTCAAGACGCCATGGGCGAGAAGGTAGGAACTGTTATTCAGTTAATTGCAACATTTATGGGAGGCTTTGTTATAGCATTTATTAAGGGATGGCTTCTCGCCCTTGTCATGCTATCTTCTATTCCCCTTCTTGTCCTCGCTGGTGCGGTCGTGAGCATCCTTACATCGAAGTTGGTAACCCGTGGACAAGCTGCTTATTCAGTGGCAGCAACTGTGGTGGAGCAGACAATTAGTTCAATTAGAACTGTTGCATCATTTTCAGGAGAAAAACAAGCTATAGACAATTACAACTCCTCCTTAACTGAAGCTTACAATTCTTCTGTGCAAGAAGGTTTGGCATCGGGTTTTGGATTTGGCTTCGTTATGCTTATTATGATGTCTAGTTATGCTTTGGCTATATGGTTTGGCGGAAAGATGATTCTTGAAAGAGGATATACAGGAGGAGAAGTAATAAATGTACTTTTCGCTGTATTGACTGGCTCCATGGCTCTTGGGCACACATCCCCATGCGTGAGTGCATTTGCTGCTGGACAAGCTGCAGCTTATAAGATGTTTGAGACAATTAACAGAAAGCCGGAGATAGATTCTTATGAAACTAATGGACAGCAGTGCCAAGACATCCATGGAGACATAGAACTGAGGGATGTATATTTTAGCTATCCTGCAAGACCGGAGGAAAAAATATTCCGTGGATTTTCTCTCTCAATACCTAGAGGTGCAACTGCTGCTTTGGTTGGAGAGAGCGGAAGTGGCAAATCAACTGTAATCAGTTTGATTGAGAGATTTTATGATCCCCAATCTGGGGAAGTTGTTATTGATGGTATTAATCTCAAAGATTACCAGCTCAAATGGATCCGACAGAAAATAGGTCTTGTCAGCCAGGAACCTATTTTGTTTACTTGTAGCATAAGAGATAACATTGCCTATGGGAAGGATGGTGCAACTACAGAAGAAATAAGGGTCGCTGCAGAGCTTGCCAATGCTGCTAAATTCATAGACAAATTGCCTCAGGGACTAGGCACGATGGTTGGTGAGCATGGGACTCAGCTATCCGGGGGCCAAAAGCAGAGAGTAGCCATAGCTAGAGCAATCTTGAAAGACCCAAGAATTCTACTTTTAGATGAAGCCACGAGCGCTCTTGATGCAGAATCTGAGAGGGTTGTGCAGGAGGCATTAGATAGAATTATGATTAACCGCACTACTGTCATTGTAGCCCACCGTTTGAGCACAGTAAGGAATGCTGACACCATTGCTGTTATACAAAGAGGGACAATCGTTGAAAAAGGTCCACATTCTGAGCTAGTTAAGGACCCTGGAGGAGCATATAGCCAGCTTATAAGGTTGCAAGAAATGAGCAGTGCTTCAGAACAGACTGATGTGAATGATCAAGAAAGGCGTAGTAGTGTGGAATTGGATTCCCAGAATAGCAGCCATCATTCCCTCTCAATCTCATATGATGTGGCCCCTGCACTAGGTTTCCTTGAAGTAGCACCTAAAGAATCCGATATTCCTGCTTCAGAATCATCAGTAGTACCTCCAGAAGTCTCACTTCGCCGCCTTGCTTACCTGAACAAGCCAGAGATCCCAGTTTTAATTTTTGCTACTATAGCTGCAATAGCCAATGGGTTAATCTTTCCTTTTTTTGGGCTATTGATTGCTAGTGTAGTCAAGACCTTCTTTGAGCCGCCACATCTACTCCTCAACAATTCTAAGTTTTGGGCATTAATTGCCATTGTTCTTGGAGTGGGGTCTTGCATAACACTTCCATCAAGACAATACCTTTTTGCTGTGGTGGGAAGTAGGTTAATAAAACGAGTCCGATCAATGTGTTTTGAGAAAGTGGTTCACATGGAAGTAAGTTGGTTTGACGATCCTGAGCACTCAAGTGGTGCAATTGGTGCAAGGCTTTCTACAGATATCGCTTATCTCCGAGGGTTGGTTGGAGATGCTTTTGGTTTGCATGTTCAGAACTCATCAACTGCAATTGCTGGCTTGGTTATTGCTTTCGTGGCAAATTGGCCACTCGCTCTTATAACCCTTGTTCTGTTGCCTCTTCTAGCAGTAAATGGTTATTTTCAAGTGAAGTTCATGAAAGGATTTAGTGCCGATGCAAAGAAAATGTACGAGGAGGCAAGTCAAGTAGCGAATGATGCTGTAGGGAGTATTAGAACAATTGCTTCCTTTTGTGCCGAAGAGAAGGTGATGCAAATATACCAGAGAAAATGTGAAGGCCCTATTAAGACAGGGATAAGACGAGGGTTAATCAGTGGGATCGGATTTGGTCTATCATTCTTTTTGCAATTTTCTGTTTTTGCCTGTATTTTTTACGCTGGATCACAACTTGTTGCAGCAGGCAAGACAACATTCTCTGATGTTTTCCGGGTTTTCTTCGCTCTCACTATGGCAACTGTTGGAGTGTCTCAATCGGGTTCCCTTGCCCCCGATTTAAGTAAAGGAAAGAGCTCTCTTGCGTCCATATTTGCAATTCTTGACCGGAAATCAAAAATAGATTCTAGTGACAACTTTGGAACAACTATAGAGAATGTGAAGGGAGAAATTGAATTACGCCATTTGAGTTTCAAGTATCCAACTAGGCCTGATGTACCGATCTTCCAGGACCTTTGCTTGACCATCCATCATGGCAAGACGGTTGCTCTGGTTGGAGAAAGTGGAAGTGGGAAATCGACAGTAGTCTCGCTGTTGCAGAGATTTTATGACCCTGATTCGGGTCACATTACACTAGATGGAATCGAAATCCAAAAGCTACAGTTGAAGTGGTTGAGGCAGCAAATGGGGCTGGTGAGCCAGGAGCCTGTGTTGTTTAATGACACTATCCGAGCCAACATTGCATATGGAAAGGAAGGAGATGCAACAGAAGCTGAAATTATAGCTGCAGCAGAATTGGCAAATGCTCACAAGTTCATTAGTAGTTTACAACAGGGTTATGCCACAGTCGTAGGAGAGCGGGGTATTCAATTGTCCGGTGGACAGAAGCAAAGAGTGGCAATTGCAAGAGCCATAATTAAGGCACCAAAGATTTTACTACTAGATGAAGCCACAAGTGCGCTTGACGCTGAATCAGAAAGAGTTGTTCAAGATGCGTTGGACCGAGTCATGGTGGATCGAACCACGGTGGTGGTTGCTCATCGGTTATCCACGATTAAGACTGCAGATTTAATCACGGTGGTGAAAAATGGAGTGATTGCAGAGAAAGGAAAGCATGAAACGTTGCTCAATATCCACGATGGCATTTATGCTTCTTTGGTTGCAGTGCATGCAAGTGCCTCATCTTAG

Protein Analysis

1267

Amino Acids

136.9

Weight (kDa)

6.13

Isoelectric Point (pI)

36.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 62 - 331 8.3e-56 ABC transporter transmembrane region
ABC_tran PF00005 399 - 547 2.8e-33 ABC transporter
ABC_membrane PF00664 700 - 972 1.1e-58 ABC transporter transmembrane region
ABC_tran PF00005 1041 - 1190 1.2e-34 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1053, 1844, 2540
Acc36I ACCTGC 1 cut(s) 22
AccB1I GGYRCC 2 cut(s) 116, 3535
AccBSI CCGCTC 2 cut(s) 1251, 3472
AciI CCGC 9 cut(s) 5, 62, 653, 915, 1251, 1702, 2062, 2192, 3472
AclI AACGTT 1 cut(s) 3734
AclWI GGATC 8 cut(s) 1292, 1354, 1367, 2083, 2372, 2786, 2848, 3636
AcoI YGGCCR 1 cut(s) 2525
AcsI RAATTY 2 cut(s) 1496, 1614
AcuI CTGAAG 3 cut(s) 831, 1854, 2007
AcyI GRCGYC 1 cut(s) 516
AfaI GTAC 7 cut(s) 129, 190, 220, 966, 2040, 2630, 3111
AfeI AGCGCT 1 cut(s) 1642
AflIII ACRYGT 1 cut(s) 171
AjnI CCWGG 5 cut(s) 335, 1386, 1819, 3120, 3312
AleI CACNNNNGTG 3 cut(s) 2391, 3641, 3692
Alw21I GWGCWC 4 cut(s) 507, 1736, 2388, 2972
Alw26I GTCTC 6 cut(s) 307, 1058, 1128, 2056, 2931, 3205
AlwI GGATC 8 cut(s) 1292, 1354, 1367, 2083, 2372, 2786, 2848, 3636
AlwNI CAGNNNCTG 3 cut(s) 719, 1658, 3386
Aor51HI AGCGCT 1 cut(s) 1642
AoxI GGCC 6 cut(s) 52, 1564, 1968, 2525, 2737, 3101
ApoI RAATTY 2 cut(s) 1496, 1614
AseI ATTAAT 3 cut(s) 255, 1332, 2231
AspLEI GCGC 2 cut(s) 1643, 3574
AspS9I GGNCC 7 cut(s) 1564, 1793, 1816, 1969, 2738, 3124, 3613
AsuC2I CCSGG 2 cut(s) 1561, 2888
AsuHPI GGTGA 7 cut(s) 262, 392, 506, 1550, 2719, 3319, 3706
AvaII GGWCC 4 cut(s) 1793, 1816, 3124, 3613
AxyI CCTNAGG 1 cut(s) 1515
BaeGI GKGCMC 1 cut(s) 1005
BalI TGGCCA 1 cut(s) 2527
BamHI GGATCC 1 cut(s) 1359
BanI GGYRCC 2 cut(s) 116, 3535
BanII GRGCYC 2 cut(s) 216, 2972
BauI CACGAG 1 cut(s) 1636
Bbv12I GWGCWC 4 cut(s) 507, 1736, 2388, 2972
BceAI ACGGC 1 cut(s) 54
BcgI CGANNNNNNTGC 2 cut(s) 2000, 2034
BciT130I CCWGG 5 cut(s) 337, 1388, 1821, 3122, 3314
BciVI GTATCC 1 cut(s) 3102
BclI TGATCA 1 cut(s) 1891
BcnI CCSGG 2 cut(s) 1561, 2888
BcoDI GTCTC 6 cut(s) 307, 1058, 1128, 2056, 2931, 3205
BfoI RGCGCY 1 cut(s) 1644
BfuAI ACCTGC 1 cut(s) 22
BfuI GTATCC 1 cut(s) 3102
Bme1390I CCNGG 7 cut(s) 337, 1388, 1561, 1821, 2888, 3122, 3314
Bme18I GGWCC 4 cut(s) 1793, 1816, 3124, 3613
BmgT120I GGNCC 7 cut(s) 1564, 1793, 1816, 1969, 2738, 3124, 3613
BmrFI CCNGG 7 cut(s) 337, 1388, 1561, 1821, 2888, 3122, 3314
BmrI ACTGGG 3 cut(s) 282, 477, 2087
BmuI ACTGGG 3 cut(s) 282, 477, 2087
BoxI GACNNNNGTC 1 cut(s) 3197
BpmI CTGGAG 2 cut(s) 1842, 2028
Bpu10I CCTNAGC 1 cut(s) 2382
BpuEI CTTGAG 1 cut(s) 2374
BpuMI CCSGG 2 cut(s) 1561, 2888
BsaHI GRCGYC 1 cut(s) 516
BsaWI WCCGGW 3 cut(s) 1177, 3000, 3488
Bse1I ACTGG 4 cut(s) 277, 472, 988, 2093
Bse21I CCTNAGG 1 cut(s) 1515
Bse3DI GCAATG 3 cut(s) 1425, 1755, 3351
BseBI CCWGG 5 cut(s) 337, 1388, 1821, 3122, 3314
BseMI GCAATG 3 cut(s) 1425, 1755, 3351
BseMII CTCAG 7 cut(s) 72, 1136, 1529, 1565, 1650, 1794, 2373
BseNI ACTGG 4 cut(s) 277, 472, 988, 2093
BseRI GAGGAG 5 cut(s) 790, 963, 1839, 2195, 2648
BseSI GKGCMC 1 cut(s) 1005
BsgI GTGCAG 3 cut(s) 378, 1691, 1959
Bsh1285I CGRYCG 1 cut(s) 657
BshFI GGCC 6 cut(s) 54, 1566, 1970, 2527, 2739, 3103
BshNI GGYRCC 2 cut(s) 116, 3535
BsiEI CGRYCG 1 cut(s) 657
BsiHKAI GWGCWC 4 cut(s) 507, 1736, 2388, 2972
BsiSI CCGG 6 cut(s) 1082, 1178, 1560, 2887, 3001, 3489
BslFI GGGAC 3 cut(s) 1533, 1561, 1789
BsmAI GTCTC 6 cut(s) 307, 1058, 1128, 2056, 2931, 3205
BsmFI GGGAC 3 cut(s) 1533, 1561, 1789
BsmI GAATGC 1 cut(s) 1750
BsnI GGCC 6 cut(s) 54, 1566, 1970, 2527, 2739, 3103
Bsp1286I GDGCHC 6 cut(s) 216, 507, 1005, 1736, 2388, 2972
Bsp19I CCATGG 3 cut(s) 519, 990, 1129
BspACI CCGC 9 cut(s) 5, 62, 653, 915, 1251, 1702, 2062, 2192, 3472
BspANI GGCC 6 cut(s) 54, 1566, 1970, 2527, 2739, 3103
BspCNI CTCAG 7 cut(s) 71, 1137, 1528, 1564, 1651, 1795, 2374
BspHI TCATGA 1 cut(s) 2595
BspMAI CTGCAG 4 cut(s) 1048, 1477, 3403, 3679
BspMI ACCTGC 1 cut(s) 22
BspPI GGATC 8 cut(s) 1292, 1354, 1367, 2083, 2372, 2786, 2848, 3636
BspT107I GGYRCC 2 cut(s) 116, 3535
BsrBI CCGCTC 2 cut(s) 1251, 3472
BsrDI GCAATG 3 cut(s) 1425, 1755, 3351
BsrI ACTGG 4 cut(s) 277, 472, 988, 2093
BssNI GRCGYC 1 cut(s) 516
BssSI CACGAG 1 cut(s) 1636
BssT1I CCWWGG 4 cut(s) 162, 519, 990, 1129
Bst2BI CACGAG 1 cut(s) 1636
Bst2UI CCWGG 5 cut(s) 337, 1388, 1821, 3122, 3314
Bst6I CTCTTC 2 cut(s) 2565, 2694
BstACI GRCGYC 1 cut(s) 516
BstAPI GCANNNNNTGC 6 cut(s) 1031, 1232, 1481, 2234, 2405, 3782
BstC8I GCNNGC 5 cut(s) 1482, 1838, 2497, 2860, 3783
BstDEI CTNAG 9 cut(s) 58, 1145, 1515, 1551, 1659, 1803, 2217, 2382, 3798
BstDSI CCRYGG 6 cut(s) 519, 688, 990, 1129, 1195, 3636
BstEII GGTNACC 1 cut(s) 682
BstENI CCTNNNNNAGG 1 cut(s) 1977
BstH2I RGCGCY 1 cut(s) 1644
BstHHI GCGC 2 cut(s) 1643, 3574
BstMAI GTCTC 6 cut(s) 307, 1058, 1128, 2056, 2931, 3205
BstMCI CGRYCG 1 cut(s) 657
BstNI CCWGG 5 cut(s) 337, 1388, 1821, 3122, 3314
BstNSI RCATGY 3 cut(s) 175, 2471, 3785
BstPAI GACNNNNGTC 1 cut(s) 3197
BstPI GGTNACC 1 cut(s) 682
BstSCI CCNGG 7 cut(s) 335, 1386, 1559, 1819, 2886, 3120, 3312
BstSLI GKGCMC 1 cut(s) 1005
BstX2I RGATCY 2 cut(s) 1359, 2088
BstXI CCANNNNNNTGG 3 cut(s) 241, 289, 3643
BstYI RGATCY 2 cut(s) 1359, 2088
Bsu36I CCTNAGG 1 cut(s) 1515
BsuI GTATCC 1 cut(s) 3102
BsuRI GGCC 6 cut(s) 54, 1566, 1970, 2527, 2739, 3103
BtgI CCRYGG 6 cut(s) 519, 688, 990, 1129, 1195, 3636
BtsI GCAGTG 3 cut(s) 1121, 1870, 3783
BtsIMutI CAGTG 7 cut(s) 202, 465, 714, 1121, 1870, 2779, 3783
BveI ACCTGC 1 cut(s) 22
Cac8I GCNNGC 5 cut(s) 1482, 1838, 2497, 2860, 3783
CaiI CAGNNNCTG 3 cut(s) 719, 1658, 3386
CciI TCATGA 1 cut(s) 2595
CfoI GCGC 2 cut(s) 1643, 3574
Cfr13I GGNCC 7 cut(s) 1564, 1793, 1816, 1969, 2738, 3124, 3613
CseI GACGC 3 cut(s) 524, 2967, 3587
Csp6I GTAC 7 cut(s) 128, 189, 219, 965, 2039, 2629, 3110
CspCI CAANNNNNGTGG 2 cut(s) 705, 740
CviQI GTAC 7 cut(s) 128, 189, 219, 965, 2039, 2629, 3110
DdeI CTNAG 9 cut(s) 58, 1145, 1515, 1551, 1659, 1803, 2217, 2382, 3798
EaeI YGGCCR 1 cut(s) 2525
Eam1104I CTCTTC 2 cut(s) 2565, 2694
EarI CTCTTC 2 cut(s) 2565, 2694
EciI GGCGGA 2 cut(s) 20, 930
Ecl136II GAGCTC 1 cut(s) 2970
Eco130I CCWWGG 4 cut(s) 162, 519, 990, 1129
Eco147I AGGCCT 1 cut(s) 3103
Eco24I GRGCYC 2 cut(s) 216, 2972
Eco32I GATATC 1 cut(s) 2425
Eco47I GGWCC 4 cut(s) 1793, 1816, 3124, 3613
Eco47III AGCGCT 1 cut(s) 1642
Eco53kI GAGCTC 1 cut(s) 2970
Eco57I CTGAAG 3 cut(s) 831, 1854, 2007
Eco81I CCTNAGG 1 cut(s) 1515
Eco91I GGTNACC 1 cut(s) 682
EcoICRI GAGCTC 1 cut(s) 2970
EcoNI CCTNNNNNAGG 1 cut(s) 1977
EcoO109I RGGNCCY 3 cut(s) 1816, 2738, 3124
EcoO65I GGTNACC 1 cut(s) 682
EcoRI GAATTC 1 cut(s) 1614
EcoRII CCWGG 5 cut(s) 335, 1386, 1819, 3120, 3312
EcoRV GATATC 1 cut(s) 2425
EcoT14I CCWWGG 4 cut(s) 162, 519, 990, 1129
EcoT38I GRGCYC 2 cut(s) 216, 2972
ErhI CCWWGG 4 cut(s) 162, 519, 990, 1129
FalI AAGNNNNNCTT 4 cut(s) 2040, 2072, 2168, 2200
FaqI GGGAC 3 cut(s) 1533, 1561, 1789
FauI CCCGC 1 cut(s) 3465
FauNDI CATATG 2 cut(s) 1960, 3358
FbaI TGATCA 1 cut(s) 1891
FriOI GRGCYC 2 cut(s) 216, 2972
GlaI GCGC 2 cut(s) 1642, 3573
GsuI CTGGAG 2 cut(s) 1842, 2028
HaeII RGCGCY 1 cut(s) 1644
HaeIII GGCC 6 cut(s) 54, 1566, 1970, 2527, 2739, 3103
HapII CCGG 6 cut(s) 1082, 1178, 1560, 2887, 3001, 3489
HgaI GACGC 3 cut(s) 524, 2967, 3587
HhaI GCGC 2 cut(s) 1643, 3574
Hin1I GRCGYC 1 cut(s) 516
Hin6I GCGC 2 cut(s) 1641, 3572
HinP1I GCGC 2 cut(s) 1641, 3572
HindIII AAGCTT 2 cut(s) 140, 813
HpaII CCGG 6 cut(s) 1082, 1178, 1560, 2887, 3001, 3489
HphI GGTGA 7 cut(s) 262, 392, 506, 1550, 2719, 3319, 3706
Hpy166II GTNNAC 6 cut(s) 692, 1404, 1796, 2353, 3440, 3494
Hpy8I GTNNAC 6 cut(s) 692, 1404, 1796, 2353, 3440, 3494
HpyAV CCTTC 9 cut(s) 523, 644, 830, 1432, 2191, 2698, 2729, 3049, 3362
HpyCH4IV ACGT 1 cut(s) 3734
HpyF3I CTNAG 9 cut(s) 58, 1145, 1515, 1551, 1659, 1803, 2217, 2382, 3798
HpySE526I ACGT 1 cut(s) 3734
Hsp92I GRCGYC 1 cut(s) 516
HspAI GCGC 2 cut(s) 1641, 3572
Ksp22I TGATCA 1 cut(s) 1891
LmnI GCTCC 4 cut(s) 727, 992, 1826, 3316
MaeII ACGT 1 cut(s) 3734
MaeIII GTNAC 4 cut(s) 34, 682, 3023, 3236
MbiI CCGCTC 2 cut(s) 1251, 3472
MfeI CAATTG 5 cut(s) 2400, 2490, 2679, 3482, 3513
MflI RGATCY 2 cut(s) 1359, 2088
MhlI GDGCHC 6 cut(s) 216, 507, 1005, 1736, 2388, 2972
MlsI TGGCCA 1 cut(s) 2527
MluNI TGGCCA 1 cut(s) 2527
MlyI GAGTC 3 cut(s) 1543, 2331, 3627
MmeI TCCRAC 7 cut(s) 1222, 1387, 2428, 2899, 3119, 3148, 3591
Mox20I TGGCCA 1 cut(s) 2527
MscI TGGCCA 1 cut(s) 2527
MslI CAYNNNNRTG 6 cut(s) 176, 1012, 2391, 3641, 3692, 3786
Msp20I TGGCCA 1 cut(s) 2527
MspA1I CMGCKG 1 cut(s) 62
MspI CCGG 6 cut(s) 1082, 1178, 1560, 2887, 3001, 3489
MspR9I CCNGG 7 cut(s) 337, 1388, 1561, 1821, 2888, 3122, 3314
MunI CAATTG 5 cut(s) 2400, 2490, 2679, 3482, 3513
Mva1269I GAATGC 1 cut(s) 1750
MvaI CCWGG 5 cut(s) 337, 1388, 1821, 3122, 3314
NciI CCSGG 2 cut(s) 1561, 2888
NcoI CCATGG 3 cut(s) 519, 990, 1129
NdeI CATATG 2 cut(s) 1960, 3358
NmuCI GTSAC 3 cut(s) 34, 3023, 3236
NspI RCATGY 3 cut(s) 175, 2471, 3785
OliI CACNNNNGTG 3 cut(s) 2391, 3641, 3692
PaeI GCATGC 1 cut(s) 3785
PagI TCATGA 1 cut(s) 2595
PceI AGGCCT 1 cut(s) 3103
PciI ACATGT 1 cut(s) 171
PcsI WCGNNNNNNNCGW 2 cut(s) 447, 522
PctI GAATGC 1 cut(s) 1750
PflFI GACNNNGTC 1 cut(s) 3617
PfoI TCCNGGA 1 cut(s) 3120
PleI GAGTC 3 cut(s) 1543, 2330, 3626
PpsI GAGTC 3 cut(s) 1543, 2330, 3626
PpuMI RGGWCCY 2 cut(s) 1816, 3124
PscI ACATGT 1 cut(s) 171
PshAI GACNNNNGTC 1 cut(s) 3197
PshBI ATTAAT 3 cut(s) 255, 1332, 2231
PsiI TTATAA 3 cut(s) 1053, 1844, 2540
Psp124BI GAGCTC 1 cut(s) 2972
Psp1406I AACGTT 1 cut(s) 3734
Psp5II RGGWCCY 2 cut(s) 1816, 3124
Psp6I CCWGG 5 cut(s) 335, 1386, 1819, 3120, 3312
PspEI GGTNACC 1 cut(s) 682
PspGI CCWGG 5 cut(s) 335, 1386, 1819, 3120, 3312
PspPI GGNCC 7 cut(s) 1564, 1793, 1816, 1969, 2738, 3124, 3613
PspPPI RGGWCCY 2 cut(s) 1816, 3124
PsrI GAACNNNNNNTAC 2 cut(s) 262, 294
PstI CTGCAG 4 cut(s) 1048, 1477, 3403, 3679
PstNI CAGNNNCTG 3 cut(s) 719, 1658, 3386
PsuI RGATCY 2 cut(s) 1359, 2088
PsyI GACNNNGTC 1 cut(s) 3617
RsaI GTAC 7 cut(s) 129, 190, 220, 966, 2040, 2630, 3111
RsaNI GTAC 7 cut(s) 128, 189, 219, 965, 2039, 2629, 3110
RseI CAYNNNNRTG 6 cut(s) 176, 1012, 2391, 3641, 3692, 3786
SacI GAGCTC 1 cut(s) 2972
Sau96I GGNCC 7 cut(s) 1564, 1793, 1816, 1969, 2738, 3124, 3613
SchI GAGTC 3 cut(s) 1543, 2331, 3627
ScrFI CCNGG 7 cut(s) 337, 1388, 1561, 1821, 2888, 3122, 3314
SduI GDGCHC 6 cut(s) 216, 507, 1005, 1736, 2388, 2972
SinI GGWCC 4 cut(s) 1793, 1816, 3124, 3613
SmiMI CAYNNNNRTG 6 cut(s) 176, 1012, 2391, 3641, 3692, 3786
SmlI CTYRAG 1 cut(s) 2389
SmoI CTYRAG 1 cut(s) 2389
SphI GCATGC 1 cut(s) 3785
SseBI AGGCCT 1 cut(s) 3103
SsiI CCGC 9 cut(s) 5, 62, 653, 915, 1251, 1702, 2062, 2192, 3472
SspI AATATT 1 cut(s) 1191
SstI GAGCTC 1 cut(s) 2972
StuI AGGCCT 1 cut(s) 3103
StyD4I CCNGG 7 cut(s) 335, 1386, 1559, 1819, 2886, 3120, 3312
StyI CCWWGG 4 cut(s) 162, 519, 990, 1129
TaiI ACGT 1 cut(s) 3737
TaqI TCGA 5 cut(s) 450, 674, 3191, 3258, 3631
TaqII GACCGA 1 cut(s) 3630
TatI WGTACW 1 cut(s) 964
TauI GCSGC 2 cut(s) 2064, 2194
TscAI CASTG 7 cut(s) 202, 472, 714, 1121, 1870, 2779, 3783
TseFI GTSAC 3 cut(s) 34, 3023, 3236
Tsp45I GTSAC 3 cut(s) 34, 3023, 3236
TspDTI ATGAA 9 cut(s) 27, 1113, 1489, 1644, 2584, 2612, 3418, 3573, 3744
TspGWI ACGGA 1 cut(s) 1184
TspRI CASTG 7 cut(s) 202, 472, 714, 1121, 1870, 2779, 3783
Tth111I GACNNNGTC 1 cut(s) 3617
VpaK11BI GGWCC 4 cut(s) 1793, 1816, 3124, 3613
VspI ATTAAT 3 cut(s) 255, 1332, 2231
XagI CCTNNNNNAGG 1 cut(s) 1977
XapI RAATTY 2 cut(s) 1496, 1614
XceI RCATGY 3 cut(s) 175, 2471, 3785
XcmI CCANNNNNNNNNTGG 2 cut(s) 289, 1127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.