Rmu_sc0009165.1_g000002

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009165.1
Physical Location & Seq
Forward (+)
11887 .. 18857
6971 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009165.1_g000002.1.cds

Sequence Viewer

Length: 3963 bp
atggctgatgatcacaaaaaacagttggatggagatttagccacagaaccagcagaaacagcatcagcaaacgcagtagaattcaaaaacaaccaagaaaatacttctggcaataagagcaaggaggaagcaaccaatacagtaccattctacaagcttttctcatttgctgattccatggattgcctgttaatgtctgttggtatgatcggcgcaattggaaatggactatgtctgcctctaatgaccgtgatcatgggagaagtgattaactcctttggagaaactacgaataccaaaaatgtggttggtttagtttcccaggtagcactaaagtttgtttacttggctgtaggggctgctgctgctgcattttcacagatgtcttgctggatgatcaccggagagagacaggctgcacgaataagatgtttatacctgaaaacaatactgaggcaagatgttggtttttttgataaagaggctaacactggggaaattgttgggagaatgtcaggtgatactgtgctcattcaagaggccatgggggagaaagtaggaacttttatccagttagttgcaacatttataggaggttttgttatagcatttgccaagggatggcatcttaccgttgtcatgctcacctctattccccctcttatcttgtctggtgctgtcatgagcctcactataaggaagttggcatcccgcggacaagctgcttattcagttggagcaactgtggtagagcagacaattggttcaatcagaactgttgcgtcatttacgagggagaagcaagctataactaagtacaacaactccttagctaaagcttacaagtctggtgtgcaagagggtttagcatcaggagtgggtcttggtacggttattcttactttattctgcagttatgcattggctatatggtatggcggcaaaatgatacttgaaaaggggtacaaagcaggagacgtcatcaatgtgatttttgctgtattcactggttctttctccctcgggcaggcatctccatgcgtgagtgcattttctgccggacaagctgcagcttataagatgtttgagacaatcaacagaaagccagatatagatgtgtatgacaccagaggactaaaatcacaagagatccgcggagacattgaactgagggatgtttattttagttatcctgcaagaccggatgagcaaatattcctcggattttctctctcgatacctagtggtgcaactgttgctttggttggacaaagcggaagtggtaaatcaactgtcattagtttgattcagagattttatgatccccaggctggtgaagttcttattgatgggaacaatctaaaagagtttcaactgaaatggattagacagaaaataggccttgtaagccaggaaccagttttgtttactggtagcattaaagataatattggctatggaaaggatgatgcaacaactgaagaaatgagggttgctgctgagctggccaatgctgcaaaattcatagacaaactacctcagggactagatacaatggttggtgaacatggaactcagctatctgggggccaaaagcagagaattgccatagcaagagcaattctgaagaacccaagaattctgcttttggatgacaaactacctcagggactagatacaatggttggtgaacatggagctcagctatctgggggccaaaagcagagaattgccatagcaagagcaattctgaagaacccaagaattctgcttttggatgaagcaacaagcgctcttgatgcagaatctgagagagttgtgcaagaggcattggacagaattatggttaacaggactactgtcattgtagcccatcgcttgagcacagtgaggagtgctgatacaattgcagtaatacatcacggaaaaattgttgaagaaggaccacatactgagctggttaaggatcctgatggtgcatatagccaacttataagattgcaagaaattagcaatgtgtcagaacatgatgctcaaaatgatcatgaaaggccagaaatttcctcaagttttcggaaactttcttcctttagatccataagttcggggtcatcagaaataggaaatagtagtcgccgtagtcactcattttcaatctcacatggtgctcctactgtaaccagtgtctttgaaatagctcctgtagaacctgacattctagcaacatcgatagaagtgcatccggaagtctcacttaggcgcctcgcttatctgaacaagacagaaatcccagtactacttctaggttctatagctgcagcaatctgtggcgtaatcttgcctatttttggggtgctaatatctagcgtaatcaagaccttctttgatccacctcatcagctccgaaaggactcaaaactttgggcattaatttttgttgttattggagtggtagctctcttggcgcatccagtgagagcatacttctttgctgtggcagggtgtaagctaataagactaatccgatcactatgctttgagaaggtcatttatatggaagcaagttggtttgatgaagccgagcactcgagtggtgcacttggtgcaaggctttcaggaaatgcagcttctctgcgagggttggttggagatgctctcagtttggctgttatgcatgcatcaactacaattgctggcttggttattgcttttttggcaaactggcaacttgcttttattattcttcttatgctgcctctactaggaataagtggatattttcaaatcaaggtgctgaaaggattaagctcaaatgcaaagaaaatgtatgaagatgcaagccaagtagccaccgatgctgtggggagtattagaacaattgcttccttttgtgctgaggaaaagattattaagttgtaccagacaaaatgtgaaggtcctatcaaggcagggataagacaaggtatagttagtggaataggctttgggctatcactcttcttgctcttttctgtatatgcatgcagtttctatgcaggggctcgacttgttggagcaggcaagacgacattcccagatgtttttcgggttttctttgccctcactatgacagctgtggcactgtctcaacagggttccttagcccctgatgcaagcaaaggaaagagctctgctgcttcaatatttgcaattcttgaccggaaatcaaaaatagatgctagtgataattccggaacaactatagaaaatttgaagggagaaattgaattttgccatgttagtttcaagtatccaaatagacctaatgtaccaatcttcctggatctgtgcttgaccattcactatgggcagacagttgctctggttggagaaagcggaagtgggaaatcaacagtgatctcattgctgcagagattttatgatcctgattcaggtcacattacattagatggtactgaaatgcaaacattacagctgaagtggttaaggcagcaaatggggctggtgagccaggagcctctactttttaatgacactattagagccaacattgcatatggaaaggaagggagtgcaaccgaggctgaaattataactgtagcagaattggcaaatgctcacaagttcattagtagtttacaacaggtaggaatccctactgtaaccttgaacaccattcagctcctaactggctataactacaagaagtggagaaaccaagtatatttttatctagccatgaaccagaatatggacctttgcattactgaggatgaacctgaaaagcttactagtgaaagttcagatgaagagaagaaatattttaaggagtggcataaggctaataggttggaagcaagagatatgacactaatgttgtcacaccataaggtaggagactggagaggaatgcctaggtcccgaaatggagctcgaagccaagaaatatgtgcagcagtatag

Protein Analysis

1320

Amino Acids

143.35

Weight (kDa)

7.55

Isoelectric Point (pI)

35.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1077, 1994, 3593
AatII GACGTC 1 cut(s) 981
AccB1I GGYRCC 1 cut(s) 2259
AccB7I CCANNNNNTGG 2 cut(s) 621, 3751
AccII CGCG 2 cut(s) 714, 1155
AccIII TCCGGA 2 cut(s) 2242, 3230
AciI CCGC 7 cut(s) 712, 714, 939, 1153, 1155, 1275, 3375
AclWI GGATC 8 cut(s) 1144, 1316, 1961, 1974, 2088, 2381, 3330, 3416
AcoI YGGCCR 1 cut(s) 1506
AcsI RAATTY 7 cut(s) 80, 1520, 1638, 1764, 2058, 3247, 3266
AcuI CTGAAG 4 cut(s) 1500, 1646, 1772, 3497
AcyI GRCGYC 2 cut(s) 978, 2260
AdeI CACNNNGTG 2 cut(s) 2165, 2603
AfaI GTAC 8 cut(s) 144, 818, 889, 965, 2295, 2918, 3309, 3454
AfeI AGCGCT 1 cut(s) 1792
AfiI CCNNNNNNNGG 7 cut(s) 621, 1027, 1331, 2348, 2762, 3431, 3751
AhlI ACTAGT 1 cut(s) 3791
AjnI CCWGG 5 cut(s) 321, 1326, 1410, 3318, 3510
AleI CACNNNNGTG 1 cut(s) 2589
Alw21I GWGCWC 8 cut(s) 531, 1702, 1886, 2170, 2586, 2599, 3170, 3934
Alw26I GTCTC 7 cut(s) 403, 969, 1082, 1152, 2254, 3129, 3891
Alw44I GTGCAC 1 cut(s) 2595
AlwI GGATC 8 cut(s) 1144, 1316, 1961, 1974, 2088, 2381, 3330, 3416
AlwNI CAGNNNCTG 1 cut(s) 1808
Ama87I CYCGRG 2 cut(s) 1022, 2587
Aor13HI TCCGGA 2 cut(s) 2242, 3230
Aor51HI AGCGCT 1 cut(s) 1792
AoxI GGCC 6 cut(s) 540, 1399, 1506, 1588, 1714, 2051
ApaLI GTGCAC 1 cut(s) 2595
ApoI RAATTY 7 cut(s) 80, 1520, 1638, 1764, 2058, 3247, 3266
AseI ATTAAT 1 cut(s) 2429
AspA2I CCTAGG 1 cut(s) 3914
AspLEI GCGC 4 cut(s) 215, 1793, 2262, 2467
AspS9I GGNCC 6 cut(s) 1588, 1714, 1943, 2936, 3754, 3918
AsuHPI GGTGA 7 cut(s) 391, 530, 637, 1346, 1574, 1700, 3517
AvaI CYCGRG 2 cut(s) 1022, 2587
AvaII GGWCC 4 cut(s) 1943, 2936, 3754, 3918
AvrII CCTAGG 1 cut(s) 3914
AxyI CCTNAGG 2 cut(s) 1539, 1665
BaeGI GKGCMC 1 cut(s) 2599
BaeI ACNNNNGTAYC 4 cut(s) 1542, 1575, 1668, 1701
BalI TGGCCA 1 cut(s) 1508
BamHI GGATCC 1 cut(s) 1966
BanI GGYRCC 1 cut(s) 2259
BanII GRGCYC 4 cut(s) 1702, 3043, 3170, 3934
Bbv12I GWGCWC 8 cut(s) 531, 1702, 1886, 2170, 2586, 2599, 3170, 3934
BbvCI CCTCAGC 1 cut(s) 2895
BccI CCATC 6 cut(s) 23, 615, 1343, 1881, 1967, 3443
BceAI ACGGC 1 cut(s) 2121
BcgI CGANNNNNNTGC 4 cut(s) 2218, 2252, 2514, 2548
BciT130I CCWGG 5 cut(s) 323, 1328, 1412, 3320, 3512
BciVI GTATCC 1 cut(s) 3300
BclI TGATCA 4 cut(s) 10, 252, 396, 2041
BcoDI GTCTC 7 cut(s) 403, 969, 1082, 1152, 2254, 3129, 3891
BcuI ACTAGT 1 cut(s) 3791
BfmI CTRYAG 9 cut(s) 351, 910, 1068, 2202, 2310, 2316, 3240, 3407, 3597
BfoI RGCGCY 2 cut(s) 1794, 2263
BfuI GTATCC 1 cut(s) 3300
BlnI CCTAGG 1 cut(s) 3914
BlpI GCTNAGC 2 cut(s) 1500, 1701
BmcAI AGTACT 1 cut(s) 2295
Bme1390I CCNGG 5 cut(s) 323, 1328, 1412, 3320, 3512
Bme18I GGWCC 4 cut(s) 1943, 2936, 3754, 3918
BmeT110I CYCGRG 2 cut(s) 1022, 2587
BmgT120I GGNCC 6 cut(s) 1588, 1714, 1943, 2936, 3754, 3918
BmiI GGNNCC 8 cut(s) 1416, 1589, 1715, 1968, 2261, 3136, 3516, 3920
BmrFI CCNGG 5 cut(s) 323, 1328, 1412, 3320, 3512
BmrI ACTGGG 2 cut(s) 501, 2285
BmuI ACTGGG 2 cut(s) 501, 2285
BoxI GACNNNNGTC 1 cut(s) 1859
BplI GAGNNNNNCTC 2 cut(s) 2640, 2672
BpmI CTGGAG 1 cut(s) 3922
Bpu10I CCTNAGC 3 cut(s) 829, 2895, 3139
Bpu1102I GCTNAGC 2 cut(s) 1500, 1701
BpuEI CTTGAG 2 cut(s) 1900, 2050
Bsa29I ATCGAT 1 cut(s) 2228
BsaHI GRCGYC 2 cut(s) 978, 2260
BsaWI WCCGGW 5 cut(s) 401, 1201, 2242, 3198, 3230
BsaXI ACNNNNNCTCC 6 cut(s) 585, 615, 729, 759, 809, 839
Bsc4I CCNNNNNNNGG 7 cut(s) 621, 1027, 1331, 2348, 2762, 3431, 3751
Bse21I CCTNAGG 2 cut(s) 1539, 1665
Bse3DI GCAATG 3 cut(s) 2020, 3401, 3549
BseAI TCCGGA 2 cut(s) 2242, 3230
BseBI CCWGG 5 cut(s) 323, 1328, 1412, 3320, 3512
BseCI ATCGAT 1 cut(s) 2228
BseLI CCNNNNNNNGG 7 cut(s) 621, 1027, 1331, 2348, 2762, 3431, 3751
BseMI GCAATG 3 cut(s) 2020, 3401, 3549
BseRI GAGGAG 1 cut(s) 1906
BseSI GKGCMC 1 cut(s) 2599
BsgI GTGCAG 1 cut(s) 402
Bsh1236I CGCG 2 cut(s) 714, 1155
BshFI GGCC 6 cut(s) 542, 1401, 1508, 1590, 1716, 2053
BshNI GGYRCC 1 cut(s) 2259
BshVI ATCGAT 1 cut(s) 2228
BsiHKAI GWGCWC 8 cut(s) 531, 1702, 1886, 2170, 2586, 2599, 3170, 3934
BsiHKCI CYCGRG 2 cut(s) 1022, 2587
BsiSI CCGG 6 cut(s) 402, 1059, 1202, 2243, 3199, 3231
BslFI GGGAC 3 cut(s) 1557, 1683, 3904
BslI CCNNNNNNNGG 7 cut(s) 621, 1027, 1331, 2348, 2762, 3431, 3751
BsmAI GTCTC 7 cut(s) 403, 969, 1082, 1152, 2254, 3129, 3891
BsmBI CGTCTC 1 cut(s) 969
BsmFI GGGAC 3 cut(s) 1557, 1683, 3904
BsmI GAATGC 1 cut(s) 3915
BsnI GGCC 6 cut(s) 542, 1401, 1508, 1590, 1716, 2053
BsoBI CYCGRG 2 cut(s) 1022, 2587
Bsp1286I GDGCHC 9 cut(s) 531, 1702, 1886, 2170, 2586, 2599, 3043, 3170, 3934
Bsp13I TCCGGA 2 cut(s) 2242, 3230
Bsp1720I GCTNAGC 2 cut(s) 1500, 1701
Bsp19I CCATGG 2 cut(s) 177, 543
BspACI CCGC 7 cut(s) 712, 714, 939, 1153, 1155, 1275, 3375
BspANI GGCC 6 cut(s) 542, 1401, 1508, 1590, 1716, 2053
BspDI ATCGAT 1 cut(s) 2228
BspEI TCCGGA 2 cut(s) 2242, 3230
BspFNI CGCG 2 cut(s) 714, 1155
BspHI TCATGA 2 cut(s) 681, 2044
BspLI GGNNCC 8 cut(s) 1416, 1589, 1715, 1968, 2261, 3136, 3516, 3920
BspMAI CTGCAG 4 cut(s) 914, 1072, 2320, 3411
BspPI GGATC 8 cut(s) 1144, 1316, 1961, 1974, 2088, 2381, 3330, 3416
BspT107I GGYRCC 1 cut(s) 2259
BsrDI GCAATG 3 cut(s) 2020, 3401, 3549
BssNI GRCGYC 2 cut(s) 978, 2260
BssT1I CCWWGG 4 cut(s) 177, 543, 615, 3914
Bst2UI CCWGG 5 cut(s) 323, 1328, 1412, 3320, 3512
Bst6I CTCTTC 2 cut(s) 3002, 3804
BstACI GRCGYC 2 cut(s) 978, 2260
BstAPI GCANNNNNTGC 3 cut(s) 1055, 1256, 2603
BstC8I GCNNGC 9 cut(s) 804, 1029, 1506, 2676, 2695, 2839, 3022, 3058, 3154
BstDSI CCRYGG 4 cut(s) 177, 543, 712, 1153
BstENI CCTNNNNNAGG 3 cut(s) 1025, 2760, 3429
BstFNI CGCG 2 cut(s) 714, 1155
BstH2I RGCGCY 2 cut(s) 1794, 2263
BstHHI GCGC 4 cut(s) 215, 1793, 2262, 2467
BstMAI GTCTC 7 cut(s) 403, 969, 1082, 1152, 2254, 3129, 3891
BstNI CCWGG 5 cut(s) 323, 1328, 1412, 3320, 3512
BstNSI RCATGY 2 cut(s) 2678, 3024
BstPAI GACNNNNGTC 1 cut(s) 1859
BstSCI CCNGG 5 cut(s) 321, 1326, 1410, 3318, 3510
BstSFI CTRYAG 9 cut(s) 351, 910, 1068, 2202, 2310, 2316, 3240, 3407, 3597
BstSLI GKGCMC 1 cut(s) 2599
BstUI CGCG 2 cut(s) 714, 1155
BstX2I RGATCY 4 cut(s) 1149, 1966, 2093, 3322
BstXI CCANNNNNNTGG 1 cut(s) 304
BstYI RGATCY 4 cut(s) 1149, 1966, 2093, 3322
Bsu15I ATCGAT 1 cut(s) 2228
Bsu36I CCTNAGG 2 cut(s) 1539, 1665
BsuI GTATCC 1 cut(s) 3300
BsuRI GGCC 6 cut(s) 542, 1401, 1508, 1590, 1716, 2053
BsuTUI ATCGAT 1 cut(s) 2228
BtgI CCRYGG 4 cut(s) 177, 543, 712, 1153
BtgZI GCGATG 1 cut(s) 1859
BtsIMutI CAGTG 7 cut(s) 489, 1005, 1893, 2188, 2478, 3119, 3399
Cac8I GCNNGC 9 cut(s) 804, 1029, 1506, 2676, 2695, 2839, 3022, 3058, 3154
CaiI CAGNNNCTG 1 cut(s) 1808
CciI TCATGA 2 cut(s) 681, 2044
CfoI GCGC 4 cut(s) 215, 1793, 2262, 2467
Cfr13I GGNCC 6 cut(s) 1588, 1714, 1943, 2936, 3754, 3918
Cfr42I CCGCGG 2 cut(s) 715, 1156
ClaI ATCGAT 1 cut(s) 2228
CseI GACGC 1 cut(s) 771
Csp6I GTAC 8 cut(s) 143, 817, 888, 964, 2294, 2917, 3308, 3453
CviQI GTAC 8 cut(s) 143, 817, 888, 964, 2294, 2917, 3308, 3453
DinI GGCGCC 1 cut(s) 2261
DraIII CACNNNGTG 2 cut(s) 2165, 2603
EaeI YGGCCR 1 cut(s) 1506
Eam1104I CTCTTC 2 cut(s) 3002, 3804
EarI CTCTTC 2 cut(s) 3002, 3804
Ecl136II GAGCTC 3 cut(s) 1700, 3168, 3932
Eco130I CCWWGG 4 cut(s) 177, 543, 615, 3914
Eco147I AGGCCT 1 cut(s) 1401
Eco24I GRGCYC 4 cut(s) 1702, 3043, 3170, 3934
Eco47I GGWCC 4 cut(s) 1943, 2936, 3754, 3918
Eco47III AGCGCT 1 cut(s) 1792
Eco53kI GAGCTC 3 cut(s) 1700, 3168, 3932
Eco57I CTGAAG 4 cut(s) 1500, 1646, 1772, 3497
Eco81I CCTNAGG 2 cut(s) 1539, 1665
Eco88I CYCGRG 2 cut(s) 1022, 2587
EcoICRI GAGCTC 3 cut(s) 1700, 3168, 3932
EcoNI CCTNNNNNAGG 3 cut(s) 1025, 2760, 3429
EcoO109I RGGNCCY 2 cut(s) 2936, 3918
EcoRI GAATTC 3 cut(s) 80, 1638, 1764
EcoRII CCWGG 5 cut(s) 321, 1326, 1410, 3318, 3510
EcoT14I CCWWGG 4 cut(s) 177, 543, 615, 3914
EcoT22I ATGCAT 4 cut(s) 922, 2676, 2680, 3022
EcoT38I GRGCYC 4 cut(s) 1702, 3043, 3170, 3934
EgeI GGCGCC 1 cut(s) 2261
EheI GGCGCC 1 cut(s) 2261
ErhI CCWWGG 4 cut(s) 177, 543, 615, 3914
Esp3I CGTCTC 1 cut(s) 969
FalI AAGNNNNNCTT 4 cut(s) 2238, 2270, 2366, 2398
FaqI GGGAC 3 cut(s) 1557, 1683, 3904
FauI CCCGC 1 cut(s) 719
FauNDI CATATG 1 cut(s) 3556
FbaI TGATCA 4 cut(s) 10, 252, 396, 2041
FriOI GRGCYC 4 cut(s) 1702, 3043, 3170, 3934
GlaI GCGC 4 cut(s) 214, 1792, 2261, 2466
GsuI CTGGAG 1 cut(s) 3922
HaeII RGCGCY 2 cut(s) 1794, 2263
HaeIII GGCC 6 cut(s) 542, 1401, 1508, 1590, 1716, 2053
HapII CCGG 6 cut(s) 402, 1059, 1202, 2243, 3199, 3231
HgaI GACGC 1 cut(s) 771
HhaI GCGC 4 cut(s) 215, 1793, 2262, 2467
Hin1I GRCGYC 2 cut(s) 978, 2260
Hin6I GCGC 4 cut(s) 213, 1791, 2260, 2465
HinP1I GCGC 4 cut(s) 213, 1791, 2260, 2465
HincII GTYRAC 1 cut(s) 1849
HindII GTYRAC 1 cut(s) 1849
HindIII AAGCTT 3 cut(s) 155, 837, 3785
HinfI GANTC 6 cut(s) 173, 1306, 1805, 2411, 3428, 3651
HpaI GTTAAC 1 cut(s) 1849
HpaII CCGG 6 cut(s) 402, 1059, 1202, 2243, 3199, 3231
HphI GGTGA 7 cut(s) 391, 530, 637, 1346, 1574, 1700, 3517
Hpy166II GTNNAC 7 cut(s) 343, 1428, 1565, 1691, 1849, 2597, 3638
Hpy8I GTNNAC 7 cut(s) 343, 1428, 1565, 1691, 1849, 2597, 3638
HpyAV CCTTC 6 cut(s) 1934, 2389, 2536, 2927, 3247, 3560
HpyCH4IV ACGT 1 cut(s) 978
HpySE526I ACGT 1 cut(s) 978
Hsp92I GRCGYC 2 cut(s) 978, 2260
HspAI GCGC 4 cut(s) 213, 1791, 2260, 2465
KasI GGCGCC 1 cut(s) 2259
Kpn2I TCCGGA 2 cut(s) 2242, 3230
Ksp22I TGATCA 4 cut(s) 10, 252, 396, 2041
KspAI GTTAAC 1 cut(s) 1849
KspI CCGCGG 2 cut(s) 715, 1156
LmnI GCTCC 9 cut(s) 737, 1697, 2173, 2203, 2406, 3053, 3514, 3687, 3929
MaeII ACGT 1 cut(s) 978
MaeIII GTNAC 5 cut(s) 2141, 2176, 3434, 3661, 3879
MfeI CAATTG 5 cut(s) 216, 759, 1905, 2688, 2877
MflI RGATCY 4 cut(s) 1149, 1966, 2093, 3322
MhlI GDGCHC 9 cut(s) 531, 1702, 1886, 2170, 2586, 2599, 3043, 3170, 3934
MlsI TGGCCA 1 cut(s) 1508
MluNI TGGCCA 1 cut(s) 1508
Mly113I GGCGCC 1 cut(s) 2260
MlyI GAGTC 1 cut(s) 2405
MmeI TCCRAC 7 cut(s) 6, 715, 1246, 2626, 3031, 3346, 3831
Mox20I TGGCCA 1 cut(s) 1508
Mph1103I ATGCAT 4 cut(s) 922, 2676, 2680, 3022
MroI TCCGGA 2 cut(s) 2242, 3230
MscI TGGCCA 1 cut(s) 1508
MslI CAYNNNNRTG 4 cut(s) 986, 1036, 2552, 2589
Msp20I TGGCCA 1 cut(s) 1508
MspA1I CMGCKG 4 cut(s) 714, 1155, 3113, 3475
MspI CCGG 6 cut(s) 402, 1059, 1202, 2243, 3199, 3231
MspR9I CCNGG 5 cut(s) 323, 1328, 1412, 3320, 3512
MunI CAATTG 5 cut(s) 216, 759, 1905, 2688, 2877
Mva1269I GAATGC 1 cut(s) 3915
MvaI CCWGG 5 cut(s) 323, 1328, 1412, 3320, 3512
MvnI CGCG 2 cut(s) 714, 1155
NarI GGCGCC 1 cut(s) 2260
NcoI CCATGG 2 cut(s) 177, 543
NdeI CATATG 1 cut(s) 3556
NlaIV GGNNCC 8 cut(s) 1416, 1589, 1715, 1968, 2261, 3136, 3516, 3920
NmeAIII GCCGAG 1 cut(s) 2605
NmuCI GTSAC 3 cut(s) 2141, 3434, 3879
NsiI ATGCAT 4 cut(s) 922, 2676, 2680, 3022
NspI RCATGY 2 cut(s) 2678, 3024
OliI CACNNNNGTG 1 cut(s) 2589
PaeI GCATGC 2 cut(s) 2678, 3024
PaeR7I CTCGAG 1 cut(s) 2587
PagI TCATGA 2 cut(s) 681, 2044
PceI AGGCCT 1 cut(s) 1401
PctI GAATGC 1 cut(s) 3915
PfeI GAWTC 5 cut(s) 173, 1306, 1805, 3428, 3651
PflFI GACNNNGTC 1 cut(s) 231
PflMI CCANNNNNTGG 2 cut(s) 621, 3751
PfoI TCCNGGA 1 cut(s) 3318
PleI GAGTC 1 cut(s) 2405
PluTI GGCGCC 1 cut(s) 2263
PpsI GAGTC 1 cut(s) 2405
PpuMI RGGWCCY 2 cut(s) 2936, 3918
PshAI GACNNNNGTC 1 cut(s) 1859
PshBI ATTAAT 1 cut(s) 2429
PsiI TTATAA 3 cut(s) 1077, 1994, 3593
Psp124BI GAGCTC 3 cut(s) 1702, 3170, 3934
Psp5II RGGWCCY 2 cut(s) 2936, 3918
Psp6I CCWGG 5 cut(s) 321, 1326, 1410, 3318, 3510
PspGI CCWGG 5 cut(s) 321, 1326, 1410, 3318, 3510
PspN4I GGNNCC 8 cut(s) 1416, 1589, 1715, 1968, 2261, 3136, 3516, 3920
PspPI GGNCC 6 cut(s) 1588, 1714, 1943, 2936, 3754, 3918
PspPPI RGGWCCY 2 cut(s) 2936, 3918
PspXI VCTCGAGB 1 cut(s) 2587
PstI CTGCAG 4 cut(s) 914, 1072, 2320, 3411
PstNI CAGNNNCTG 1 cut(s) 1808
PsuI RGATCY 4 cut(s) 1149, 1966, 2093, 3322
PsyI GACNNNGTC 1 cut(s) 231
PvuII CAGCTG 2 cut(s) 3113, 3475
RsaI GTAC 8 cut(s) 144, 818, 889, 965, 2295, 2918, 3309, 3454
RsaNI GTAC 8 cut(s) 143, 817, 888, 964, 2294, 2917, 3308, 3453
RseI CAYNNNNRTG 4 cut(s) 986, 1036, 2552, 2589
SacI GAGCTC 3 cut(s) 1702, 3170, 3934
SacII CCGCGG 2 cut(s) 715, 1156
Sau96I GGNCC 6 cut(s) 1588, 1714, 1943, 2936, 3754, 3918
ScaI AGTACT 1 cut(s) 2295
SchI GAGTC 1 cut(s) 2405
ScrFI CCNGG 5 cut(s) 323, 1328, 1412, 3320, 3512
SduI GDGCHC 9 cut(s) 531, 1702, 1886, 2170, 2586, 2599, 3043, 3170, 3934
SfcI CTRYAG 9 cut(s) 351, 910, 1068, 2202, 2310, 2316, 3240, 3407, 3597
SfoI GGCGCC 1 cut(s) 2261
Sfr274I CTCGAG 1 cut(s) 2587
Sfr303I CCGCGG 2 cut(s) 715, 1156
SgrBI CCGCGG 2 cut(s) 715, 1156
SinI GGWCC 4 cut(s) 1943, 2936, 3754, 3918
SlaI CTCGAG 1 cut(s) 2587
SmiMI CAYNNNNRTG 4 cut(s) 986, 1036, 2552, 2589
SmlI CTYRAG 3 cut(s) 1879, 2065, 2587
SmoI CTYRAG 3 cut(s) 1879, 2065, 2587
SpeI ACTAGT 1 cut(s) 3791
SphI GCATGC 2 cut(s) 2678, 3024
SseBI AGGCCT 1 cut(s) 1401
SsiI CCGC 7 cut(s) 712, 714, 939, 1153, 1155, 1275, 3375
SspDI GGCGCC 1 cut(s) 2259
SspI AATATT 4 cut(s) 1215, 1450, 3183, 3821
SstI GAGCTC 3 cut(s) 1702, 3170, 3934
StuI AGGCCT 1 cut(s) 1401
StyD4I CCNGG 5 cut(s) 321, 1326, 1410, 3318, 3510
StyI CCWWGG 4 cut(s) 177, 543, 615, 3914
TaiI ACGT 1 cut(s) 981
TaqI TCGA 5 cut(s) 1235, 2228, 2588, 3043, 3934
TatI WGTACW 2 cut(s) 816, 2293
TauI GCSGC 1 cut(s) 942
TfiI GAWTC 5 cut(s) 173, 1306, 1805, 3428, 3651
TscAI CASTG 7 cut(s) 496, 1012, 1893, 2188, 2478, 3126, 3399
TseFI GTSAC 3 cut(s) 2141, 3434, 3879
Tsp45I GTSAC 3 cut(s) 2141, 3434, 3879
TspDTI ATGAA 9 cut(s) 1513, 1794, 2061, 2589, 2844, 3616, 3755, 3789, 3822
TspGWI ACGGA 1 cut(s) 1938
TspRI CASTG 7 cut(s) 496, 1012, 1893, 2188, 2478, 3126, 3399
Tth111I GACNNNGTC 1 cut(s) 231
Van91I CCANNNNNTGG 2 cut(s) 621, 3751
VneI GTGCAC 1 cut(s) 2595
VpaK11BI GGWCC 4 cut(s) 1943, 2936, 3754, 3918
VspI ATTAAT 1 cut(s) 2429
XagI CCTNNNNNAGG 3 cut(s) 1025, 2760, 3429
XapI RAATTY 7 cut(s) 80, 1520, 1638, 1764, 2058, 3247, 3266
XceI RCATGY 2 cut(s) 2678, 3024
XcmI CCANNNNNNNNNTGG 1 cut(s) 2857
XhoI CTCGAG 1 cut(s) 2587
XmaJI CCTAGG 1 cut(s) 3914
ZraI GACGTC 1 cut(s) 979
ZrmI AGTACT 1 cut(s) 2295
Zsp2I ATGCAT 4 cut(s) 922, 2676, 2680, 3022
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.