Prupe.3G003100_v2.0.a1

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000116
Physical Location & Seq
Reverse (-)
207114 .. 214201
7088 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G003100.2

Sequence Viewer

Length: 3888 bp
ATGGCCGGGGAAAATGGTGTCAATGGTGGTACACCTCAAGAGCATGAGGAGACCACATTAAAAAACCAAGTAGAAGGCACGAACGGGGACCATCAAGGCTCAGACAAGAGCAATGGAGATGAGAAAAATGAAAAAATTCCATTTTTCAAGCTATTCTCATTTGCAGATAAGACTGATTATATCTTGATGCTCTTCGGCACAATTGGTGCCATTGGGAATGGTTCATGTATGCCCCTCATGACGATATTGTTTGGGGAGATGATTAATTCTTTTGGAAATAATCAAAACAATACAGACATAGTTAGTGTTGTTTCCAAGGTCTCTCTAAAATTTGTCTATTTGGCCATCGGGGCAGCTGTGGCAGCAACTCTTCAGGTCGCTTGCTGGATGGTAACAGGGGAAAGGCAAGCTGCAAGGATAAGGGGTTTGTATTTGAAAACAATATTGAGACAAGATGTTGGTTTCTTTGATATGGAAACAAACACTGGAGAGGTCGTTGGGAGAATGTCTGGCGACACTGTTCTCATACAAGATGCCATGGGTGAGAAGGTTGGAAAATTTGTACAGCTGCTTTCAACATTCGTCGGAGGGTTTATAATAGCATTCATCAAAGGGTGGCTTCTTACCCTTGTCATGTTGTCCTCTATTCCTCTGCTTGTGGCATCGGGTGCAGCTATGTCCATCATTATAACCAAGATGGCAACCCGTGGGCAAAGTGCTTATGCAAAAGCATCAAATGTAGTTGAACAGACGATAGGCTCCATTAGAACTGTTGCATCCTTTACCGGCGAGAAGCAAGCTATAACAAGTTACAACAAATATCTTGGAGATGCTTACAAATCAGGTGTTCATGAAGGTATAGCTGCTGGAGTAGGTCTTGGCATGGTTATGCTAGTTGTGTTCAGTTCTTATGCCTTGGCTGTATGGTTTGGTTCAAGAATGATAAGGGACAAAGGATATTCCGGGGGTGATGTGTTGAATGTGATTATTGCTGTTTTGACTGGATCCATGTCTCTGGGGCAGGCATCACCGTGCTTGAGTGCATTTGCTGCTGGTCAAGCTGCAGCATTTAAGATGTTTGAGACTATCAGTAGGAAGCCAGAGATTGATGCTTATGACGAAAGAGGAAGGATATTGGATGACATTCGTGGAGATATAGAGTTGAGAGAGGTTTATTTCAGTTATCCAGCCAGACCAGAAGAACAAATATTCGACGGGTTCTCCCTTTATATCCCTAGTGGCACCACCGCAGCTCTGGTTGGACAAAGTGGAAGTGGGAAGTCAACAGTCATCAGTCTGATAGAGAGATTTTATGATCCACGAGCTGGTGAAGTTTTGATAGATGGTATAAACCTAAAAGAATTTCAGCTCAAATGGATTCGGAATAAAATTGGTCTTGTCAGCCAGGAACCTGTACTGTTTGCATCAAGCATTAAGGAAAATATTGCCTATGGAAAGGATGGTGCTACCCTTGAAGAGATAAAAGCAGCAGCTGAACGTGCAAATGCCGCTAAATTTATTGATAAACTGCCTCAGGGGGTTGACACCATGGTCGGTGAGCATGGGACTCAGCTGTCTGGTGGCCAGAAGCAGAGAATTGCTATAGCAAGAGCAATTTTGAAAGATCCACGAATATTACTTCTGGATGAAGCTACAAGTGCACTTGATGCAGAATCTGAGAGGATAGTTCAAGAAGCATTGGATAGGATTATGGTGAACCGAACAACTGTTATTGTTGCTCATCGTTTGAGCACAGTGAGGAATGCAGATACAATTGCTGTCATTCATAAAGGAAAGATGGTTGAAAAAGGCTCACACTCAGAGTTGCTCAAGGATCCTGAAGGAGCATACTCTCAACTTATACGCTTGCAAGAAAACAATCGATCAGAACAAACAGCAGAATCTCAGAACAAATCTGAAATAACTACGGAATCTTTTAGACAGTCGAGTCAAAGGATGTCGTTAGTAAGATCCATAAGTCGGAACTCCTCTCTAGGAAATAGCAGCCGCCACTCATTTTCAGTCTCATTTGGTTTACCCACAGGACTTGGTAGCATGGGTAGTGTAAGGGACAATACAATGGCAGACCCAGAAGCCCCTGCCAAGGAATTAGAGCAACCTCCAAAGATCTCACTTCGCCGCCTTGCTGCCCTCAACAAGCCCGAGATTCCAGTGCTTCTTATTGGGACTGTAGCTGCAATGGGCAATGGTGTTATACTTCCAATTTTTGGTGTGCTTATTTCCAGGGTAATAAAGACTTTCTATGAACCACCTCATGAACAAAAGAAAGATTCAGAGTTTTGGGCATTAATGTTTATTACCCTTGGTTTGGCATCATTACTAGCGATCCCAGGACGAGGATATTTCTTTTCTGTTGCTGGTAGTAAGTTAATTGAACGTATCAGGTTGATGTGTTTTAAGAAAGTGGTTAACATGGAGGTTGGGTGGTTTGATGAGCCTGAGAACTCAAGTGGTGCCATTGGTGCAAGGCTCTCAGCAGATGCGGCAACAGTGCGAGCCCTAGTTGGAGATGCACTAGCTCAAATAGTTAATAGCATTGCGACCGCAATTGCAGGTTTGGTCATTGCTTTTGTTGCATGTTGGCAGCTGGCATTTATTATCCTCGCATTGATTCCTCTTATTGGAGTTAATGGATATGTTCAAGCAAAATTCATGAGAGGATTCAGTGCAGATGCAAAGTTGATGTATGAGGAAGCAAGCCAAGTTGCTAATGACGCAGTTGGGAGCATAAGAACAGTTGCTTCTTTCTGTGCTGAAGAAAAGGTAATGGAACTATACAGAAGGAAATGTGAAGGTCCTACGGCGGCAGGAAAAAGACAAGGCTTGATCAGTGGATTAGGATTTGGGATATCTTTCTTCTTCCTGTTTTGTGTCTATGCAACCAGTTTCTATGCTGGAGCTAAACTTGTTGAGGCTGGAAAAACAACATTTGCTGATGTTTTCCAAGTTTTCTTTGCTTTGACCATGGCAGCTACGGGAATTTCTCAATCAAGCTCCTTTGCCCCAGATACTAACAAAGCCAGGATTGCTGCTGCTTCCATATTTGCAATAATAGACCGCAAGTCAAAGATAGACCCAAGTGACGAGTCAGGTGTGAAATTGGATAATGTAAAGGGAGAGATTGAGCTTCGCCATGTAAGCTTTACATATGCATCTAGGCCAGATATACAGATTTTCCGAGACCTCAGTTTAACTATTCATTGTGGCAAGACAGTTGCCCTGGTCGGAGAAAGTGGGAGTGGAAAATCCACAGTGGTAGCATTGTTGCAAAGATTTTATAATCCGGATTCAGGTCATATCACACTTGATGGAACTGAACTTGGGAAATTTCAATTGAAATGGTTGAGGCAGCAGATGGGGCTTGTGAGCCAAGAACCTGTTTTATTTAATGACACCATCCGTGCCAACATCGCTTATGGAAAAGATGGGGAAGCAACTGAGGCAGAAATTATAGCTGCATCAGAGTTGGCCAATGCCCACAAGTTCATTAGTAGCTTACACCAGGGCTATGACACCGTAGTAGGAGAACGTGGAGTGCAATTGTCTGGGGGGCAGAAGCAACGTGTAGCCATCGCACGTGCTATCATCAAGAGCCCTAAGGTATTACTGTTGGATGAAGCTACAAGTGCACTTGATGCTGAATCTGAGAGAGTAGTTCAAGATGCATTAGACAAAGTGATGGTAAACCGGACCACGGTGGTGGTTGCCCATCGACTATCCACAATCAAGAATGCTGATGTGATTGCAGTGGTTAAAAATGGAGTTATCGTAGAGAAAGGCAAGCATGATACTTTGATTAACATCACAGAGGGATTTTATGCATCCTTGGTTGCTCTTCACATTAGCGCTTCAACTTCAACTACATGA

Protein Analysis

1296

Amino Acids

139.69

Weight (kDa)

7.02

Isoelectric Point (pI)

33.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 596, 689, 3300
AasI GACNNNNNNGTC 3 cut(s) 1550, 1573, 1947
Acc36I ACCTGC 1 cut(s) 2564
AccB1I GGYRCC 3 cut(s) 206, 1241, 2474
AccB7I CCANNNNNTGG 2 cut(s) 1325, 2228
AccIII TCCGGA 1 cut(s) 3304
AciI CCGC 8 cut(s) 1248, 1509, 2008, 2140, 2504, 2565, 2825, 3079
AclWI GGATC 8 cut(s) 999, 1012, 1310, 1619, 1829, 1842, 1965, 2341
AcoI YGGCCR 4 cut(s) 3, 342, 1582, 3489
AcsI RAATTY 8 cut(s) 135, 329, 557, 1361, 1514, 2669, 3000, 3347
AcuI CTGAAG 3 cut(s) 356, 1860, 2796
AcvI CACGTG 1 cut(s) 3599
AfaI GTAC 3 cut(s) 31, 564, 1416
AfeI AGCGCT 1 cut(s) 3868
AfiI CCNNNNNNNGG 9 cut(s) 1325, 1980, 2104, 2228, 2329, 2357, 2642, 3311, 3715
AflIII ACRYGT 1 cut(s) 3583
AhdI GACNNNNNGTC 1 cut(s) 3082
AjnI CCWGG 6 cut(s) 1404, 2243, 2350, 3041, 3240, 3522
AleI CACNNNNGTG 1 cut(s) 3719
Alw21I GWGCWC 3 cut(s) 1663, 1754, 3652
Alw26I GTCTC 7 cut(s) 44, 325, 442, 1017, 1076, 2029, 3195
Alw44I GTGCAC 2 cut(s) 1659, 3648
AlwI GGATC 8 cut(s) 999, 1012, 1310, 1619, 1829, 1842, 1965, 2341
AlwNI CAGNNNCTG 2 cut(s) 1493, 1676
Ama87I CYCGRG 1 cut(s) 2162
Aor13HI TCCGGA 1 cut(s) 3304
Aor51HI AGCGCT 1 cut(s) 3868
AoxI GGCC 5 cut(s) 3, 342, 1582, 3179, 3489
ApaLI GTGCAC 2 cut(s) 1659, 3648
ApoI RAATTY 8 cut(s) 135, 329, 557, 1361, 1514, 2669, 3000, 3347
AseI ATTAAT 2 cut(s) 264, 2309
Asp700I GAANNNNTTC 1 cut(s) 135
AspLEI GCGC 1 cut(s) 3869
AspS9I GGNCC 3 cut(s) 88, 2816, 3711
AsuC2I CCSGG 2 cut(s) 7, 964
AsuHPI GGTGA 6 cut(s) 554, 980, 1020, 1340, 1568, 1726
AvaI CYCGRG 1 cut(s) 2162
AvaII GGWCC 3 cut(s) 88, 2816, 3711
AxyI CCTNAGG 2 cut(s) 1533, 3618
BaeGI GKGCMC 2 cut(s) 1663, 3652
BalI TGGCCA 3 cut(s) 344, 1584, 3491
BamHI GGATCC 2 cut(s) 1004, 1834
BanI GGYRCC 3 cut(s) 206, 1241, 2474
BanII GRGCYC 2 cut(s) 2521, 3617
BauI CACGAG 1 cut(s) 1320
BbrPI CACGTG 1 cut(s) 3599
Bbv12I GWGCWC 3 cut(s) 1663, 1754, 3652
BceAI ACGGC 1 cut(s) 2838
BciT130I CCWGG 6 cut(s) 1406, 2245, 2352, 3043, 3242, 3524
BclI TGATCA 1 cut(s) 2847
BcnI CCSGG 2 cut(s) 7, 964
BcoDI GTCTC 7 cut(s) 44, 325, 442, 1017, 1076, 2029, 3195
BfaI CTAG 7 cut(s) 893, 1236, 1994, 2342, 2522, 2537, 3177
BfmI CTRYAG 3 cut(s) 1062, 1602, 2190
BfoI RGCGCY 1 cut(s) 3870
BfuAI ACCTGC 1 cut(s) 2564
BglI GCCNNNNNGGC 1 cut(s) 350
BglII AGATCT 1 cut(s) 2127
Bme1390I CCNGG 8 cut(s) 7, 964, 1406, 2245, 2352, 3043, 3242, 3524
Bme18I GGWCC 3 cut(s) 88, 2816, 3711
BmeRI GACNNNNNGTC 1 cut(s) 3082
BmeT110I CYCGRG 1 cut(s) 2162
BmgT120I GGNCC 3 cut(s) 88, 2816, 3711
BmiI GGNNCC 8 cut(s) 89, 208, 760, 1006, 1243, 1410, 1836, 2476
BmrFI CCNGG 8 cut(s) 7, 964, 1406, 2245, 2352, 3043, 3242, 3524
BpmI CTGGAG 3 cut(s) 507, 888, 2937
BpuEI CTTGAG 4 cut(s) 21, 1057, 1814, 2452
BpuMI CCSGG 2 cut(s) 7, 964
Bsa29I ATCGAT 1 cut(s) 1882
BsaAI YACGTR 1 cut(s) 3599
BsaBI GATNNNNATC 1 cut(s) 3821
BsaI GGTCTC 3 cut(s) 44, 325, 3195
BsaWI WCCGGW 2 cut(s) 3304, 3708
BsaXI ACNNNNNCTCC 8 cut(s) 480, 510, 1205, 1235, 2429, 2459, 3774, 3804
Bsc4I CCNNNNNNNGG 9 cut(s) 1325, 1980, 2104, 2228, 2329, 2357, 2642, 3311, 3715
Bse118I RCCGGY 1 cut(s) 785
Bse1I ACTGG 4 cut(s) 490, 1006, 2171, 2904
Bse21I CCTNAGG 2 cut(s) 1533, 3618
Bse3DI GCAATG 5 cut(s) 118, 2205, 2212, 2556, 2583
Bse8I GATNNNNATC 1 cut(s) 3821
BseAI TCCGGA 1 cut(s) 3304
BseBI CCWGG 6 cut(s) 1406, 2245, 2352, 3043, 3242, 3524
BseCI ATCGAT 1 cut(s) 1882
BseGI GGATG 9 cut(s) 393, 776, 1144, 1465, 1651, 1962, 3417, 3640, 3842
BseJI GATNNNNATC 1 cut(s) 3821
BseLI CCNNNNNNNGG 9 cut(s) 1325, 1980, 2104, 2228, 2329, 2357, 2642, 3311, 3715
BseMI GCAATG 5 cut(s) 118, 2205, 2212, 2556, 2583
BseNI ACTGG 4 cut(s) 490, 1006, 2171, 2904
BseRI GAGGAG 2 cut(s) 62, 1978
BseSI GKGCMC 2 cut(s) 1663, 3652
BsgI GTGCAG 2 cut(s) 690, 2709
Bsh1285I CGRYCG 1 cut(s) 2565
BshFI GGCC 5 cut(s) 5, 344, 1584, 3181, 3491
BshNI GGYRCC 3 cut(s) 206, 1241, 2474
BshVI ATCGAT 1 cut(s) 1882
BsiEI CGRYCG 1 cut(s) 2565
BsiHKAI GWGCWC 3 cut(s) 1663, 1754, 3652
BsiHKCI CYCGRG 1 cut(s) 2162
BsiSI CCGG 5 cut(s) 6, 786, 963, 3305, 3709
BslFI GGGAC 5 cut(s) 101, 962, 1579, 2084, 2200
BslI CCNNNNNNNGG 9 cut(s) 1325, 1980, 2104, 2228, 2329, 2357, 2642, 3311, 3715
BsmAI GTCTC 7 cut(s) 44, 325, 442, 1017, 1076, 2029, 3195
BsmFI GGGAC 5 cut(s) 101, 962, 1579, 2084, 2200
BsmI GAATGC 3 cut(s) 602, 1768, 3757
BsnI GGCC 5 cut(s) 5, 344, 1584, 3181, 3491
Bso31I GGTCTC 3 cut(s) 44, 325, 3195
BsoBI CYCGRG 1 cut(s) 2162
Bsp1286I GDGCHC 5 cut(s) 1663, 1754, 2521, 3617, 3652
Bsp13I TCCGGA 1 cut(s) 3304
Bsp1407I TGTACA 1 cut(s) 562
Bsp143I GATC 9 cut(s) 1004, 1315, 1624, 1834, 1883, 1970, 2127, 2346, 2847
Bsp19I CCATGG 3 cut(s) 537, 1548, 2985
BspACI CCGC 8 cut(s) 1248, 1509, 2008, 2140, 2504, 2565, 2825, 3079
BspANI GGCC 5 cut(s) 5, 344, 1584, 3181, 3491
BspDI ATCGAT 1 cut(s) 1882
BspEI TCCGGA 1 cut(s) 3304
BspHI TCATGA 4 cut(s) 237, 850, 2275, 2673
BspLI GGNNCC 8 cut(s) 89, 208, 760, 1006, 1243, 1410, 1836, 2476
BspMAI CTGCAG 1 cut(s) 1066
BspMI ACCTGC 1 cut(s) 2564
BspPI GGATC 8 cut(s) 999, 1012, 1310, 1619, 1829, 1842, 1965, 2341
BspQI GCTCTTC 2 cut(s) 197, 3861
BspT107I GGYRCC 3 cut(s) 206, 1241, 2474
BspTNI GGTCTC 3 cut(s) 44, 325, 3195
BsrDI GCAATG 5 cut(s) 118, 2205, 2212, 2556, 2583
BsrFI RCCGGY 1 cut(s) 785
BsrGI TGTACA 1 cut(s) 562
BsrI ACTGG 4 cut(s) 490, 1006, 2171, 2904
BssAI RCCGGY 1 cut(s) 785
BssMI GATC 9 cut(s) 1004, 1315, 1624, 1834, 1883, 1970, 2127, 2346, 2847
BssSI CACGAG 1 cut(s) 1320
BssT1I CCWWGG 8 cut(s) 315, 537, 915, 1548, 2103, 2323, 2985, 3846
Bst2BI CACGAG 1 cut(s) 1320
Bst2UI CCWGG 6 cut(s) 1406, 2245, 2352, 3043, 3242, 3524
Bst6I CTCTTC 4 cut(s) 197, 375, 1470, 3861
BstAPI GCANNNNNTGC 4 cut(s) 668, 1049, 1667, 3656
BstAUI TGTACA 1 cut(s) 562
BstBAI YACGTR 1 cut(s) 3599
BstC8I GCNNGC 9 cut(s) 382, 408, 798, 1023, 1868, 2517, 2610, 2719, 3803
BstDSI CCRYGG 5 cut(s) 537, 706, 1548, 2985, 3714
BstF5I GGATG 9 cut(s) 393, 776, 1144, 1465, 1651, 1962, 3417, 3640, 3842
BstH2I RGCGCY 1 cut(s) 3870
BstHHI GCGC 1 cut(s) 3869
BstKTI GATC 9 cut(s) 1007, 1318, 1627, 1837, 1886, 1973, 2130, 2349, 2850
BstMAI GTCTC 7 cut(s) 44, 325, 442, 1017, 1076, 2029, 3195
BstMBI GATC 9 cut(s) 1004, 1315, 1624, 1834, 1883, 1970, 2127, 2346, 2847
BstMCI CGRYCG 1 cut(s) 2565
BstNI CCWGG 6 cut(s) 1406, 2245, 2352, 3043, 3242, 3524
BstNSI RCATGY 1 cut(s) 2601
BstSCI CCNGG 8 cut(s) 5, 962, 1404, 2243, 2350, 3041, 3240, 3522
BstSFI CTRYAG 3 cut(s) 1062, 1602, 2190
BstSLI GKGCMC 2 cut(s) 1663, 3652
BstX2I RGATCY 5 cut(s) 1004, 1624, 1834, 1970, 2127
BstXI CCANNNNNNTGG 2 cut(s) 1015, 3721
BstYI RGATCY 5 cut(s) 1004, 1624, 1834, 1970, 2127
Bsu15I ATCGAT 1 cut(s) 1882
Bsu36I CCTNAGG 2 cut(s) 1533, 3618
BsuRI GGCC 5 cut(s) 5, 344, 1584, 3181, 3491
BsuTUI ATCGAT 1 cut(s) 1882
BtgI CCRYGG 5 cut(s) 537, 706, 1548, 2985, 3714
BtgZI GCGATG 2 cut(s) 3415, 3577
BtsCI GGATG 9 cut(s) 393, 776, 1144, 1465, 1651, 1962, 3417, 3640, 3842
BtsI GCAGTG 1 cut(s) 3774
BtsIMutI CAGTG 9 cut(s) 483, 516, 1761, 2178, 2517, 2692, 2857, 3279, 3774
BveI ACCTGC 1 cut(s) 2564
Cac8I GCNNGC 9 cut(s) 382, 408, 798, 1023, 1868, 2517, 2610, 2719, 3803
CaiI CAGNNNCTG 2 cut(s) 1493, 1676
CciI TCATGA 4 cut(s) 237, 850, 2275, 2673
CfoI GCGC 1 cut(s) 3869
Cfr10I RCCGGY 1 cut(s) 785
Cfr13I GGNCC 3 cut(s) 88, 2816, 3711
ClaI ATCGAT 1 cut(s) 1882
CseI GACGC 1 cut(s) 2744
Csp6I GTAC 3 cut(s) 30, 563, 1415
CspCI CAANNNNNGTGG 2 cut(s) 2029, 2064
CviQI GTAC 3 cut(s) 30, 563, 1415
DpnI GATC 9 cut(s) 1006, 1317, 1626, 1836, 1885, 1972, 2129, 2348, 2849
DpnII GATC 9 cut(s) 1004, 1315, 1624, 1834, 1883, 1970, 2127, 2346, 2847
DrdI GACNNNNNNGTC 3 cut(s) 1550, 1573, 1947
DriI GACNNNNNGTC 1 cut(s) 3082
DseDI GACNNNNNNGTC 3 cut(s) 1550, 1573, 1947
EaeI YGGCCR 4 cut(s) 3, 342, 1582, 3489
Eam1104I CTCTTC 4 cut(s) 197, 375, 1470, 3861
Eam1105I GACNNNNNGTC 1 cut(s) 3082
EarI CTCTTC 4 cut(s) 197, 375, 1470, 3861
Eco130I CCWWGG 8 cut(s) 315, 537, 915, 1548, 2103, 2323, 2985, 3846
Eco24I GRGCYC 2 cut(s) 2521, 3617
Eco31I GGTCTC 3 cut(s) 44, 325, 3195
Eco32I GATATC 1 cut(s) 2871
Eco47I GGWCC 3 cut(s) 88, 2816, 3711
Eco47III AGCGCT 1 cut(s) 3868
Eco57I CTGAAG 3 cut(s) 356, 1860, 2796
Eco72I CACGTG 1 cut(s) 3599
Eco81I CCTNAGG 2 cut(s) 1533, 3618
Eco88I CYCGRG 1 cut(s) 2162
EcoO109I RGGNCCY 1 cut(s) 2816
EcoRII CCWGG 6 cut(s) 1404, 2243, 2350, 3041, 3240, 3522
EcoRV GATATC 1 cut(s) 2871
EcoT14I CCWWGG 8 cut(s) 315, 537, 915, 1548, 2103, 2323, 2985, 3846
EcoT22I ATGCAT 3 cut(s) 3175, 3688, 3844
EcoT38I GRGCYC 2 cut(s) 2521, 3617
ErhI CCWWGG 8 cut(s) 315, 537, 915, 1548, 2103, 2323, 2985, 3846
FalI AAGNNNNNCTT 2 cut(s) 603, 635
FaqI GGGAC 5 cut(s) 101, 962, 1579, 2084, 2200
FauNDI CATATG 1 cut(s) 3169
FbaI TGATCA 1 cut(s) 2847
FokI GGATG 9 cut(s) 400, 763, 1151, 1472, 1658, 1969, 3404, 3647, 3829
FriOI GRGCYC 2 cut(s) 2521, 3617
FspBI CTAG 7 cut(s) 893, 1236, 1994, 2342, 2522, 2537, 3177
GlaI GCGC 1 cut(s) 3868
GsuI CTGGAG 3 cut(s) 507, 888, 2937
HaeII RGCGCY 1 cut(s) 3870
HaeIII GGCC 5 cut(s) 5, 344, 1584, 3181, 3491
HapII CCGG 5 cut(s) 6, 786, 963, 3305, 3709
HgaI GACGC 1 cut(s) 2744
HhaI GCGC 1 cut(s) 3869
Hin6I GCGC 1 cut(s) 3867
HinP1I GCGC 1 cut(s) 3867
HincII GTYRAC 3 cut(s) 1284, 1543, 2431
HindII GTYRAC 3 cut(s) 1284, 1543, 2431
HindIII AAGCTT 1 cut(s) 3160
HpaI GTTAAC 1 cut(s) 2431
HpaII CCGG 5 cut(s) 6, 786, 963, 3305, 3709
HphI GGTGA 6 cut(s) 554, 980, 1020, 1340, 1568, 1726
Hpy166II GTNNAC 9 cut(s) 32, 1284, 1543, 1661, 1717, 2036, 2431, 3650, 3706
Hpy8I GTNNAC 9 cut(s) 32, 1284, 1543, 1661, 1717, 2036, 2431, 3650, 3706
Hpy99I CGWCG 2 cut(s) 587, 1217
HpyAV CCTTC 7 cut(s) 68, 541, 848, 1122, 1835, 2796, 2807
HpyCH4IV ACGT 5 cut(s) 1498, 2398, 3550, 3583, 3598
HpySE526I ACGT 5 cut(s) 1498, 2398, 3550, 3583, 3598
HspAI GCGC 1 cut(s) 3867
Kpn2I TCCGGA 1 cut(s) 3304
Ksp22I TGATCA 1 cut(s) 2847
KspAI GTTAAC 1 cut(s) 2431
Kzo9I GATC 9 cut(s) 1004, 1315, 1624, 1834, 1883, 1970, 2127, 2346, 2847
LguI GCTCTTC 2 cut(s) 197, 3861
LmnI GCTCC 5 cut(s) 764, 1844, 2745, 2918, 3020
MaeI CTAG 7 cut(s) 893, 1236, 1994, 2342, 2522, 2537, 3177
MaeII ACGT 5 cut(s) 1498, 2398, 3550, 3583, 3598
MaeIII GTNAC 3 cut(s) 391, 809, 3101
MalI GATC 9 cut(s) 1006, 1317, 1626, 1836, 1885, 1972, 2129, 2348, 2849
MboI GATC 9 cut(s) 1004, 1315, 1624, 1834, 1883, 1970, 2127, 2346, 2847
MboII GAAGA 8 cut(s) 184, 362, 1211, 1487, 2789, 2869, 2872, 3848
MfeI CAATTG 5 cut(s) 201, 1773, 2568, 3353, 3560
MflI RGATCY 5 cut(s) 1004, 1624, 1834, 1970, 2127
MhlI GDGCHC 5 cut(s) 1663, 1754, 2521, 3617, 3652
MlsI TGGCCA 3 cut(s) 344, 1584, 3491
MluNI TGGCCA 3 cut(s) 344, 1584, 3491
MlyI GAGTC 3 cut(s) 1561, 1957, 3116
MmeI TCCRAC 7 cut(s) 532, 565, 1240, 1961, 2506, 3226, 3612
Mox20I TGGCCA 3 cut(s) 344, 1584, 3491
Mph1103I ATGCAT 3 cut(s) 3175, 3688, 3844
MroI TCCGGA 1 cut(s) 3304
MroXI GAANNNNTTC 1 cut(s) 135
MscI TGGCCA 3 cut(s) 344, 1584, 3491
MslI CAYNNNNRTG 3 cut(s) 887, 1030, 3719
Msp20I TGGCCA 3 cut(s) 344, 1584, 3491
MspA1I CMGCKG 5 cut(s) 356, 568, 1493, 1573, 2608
MspI CCGG 5 cut(s) 6, 786, 963, 3305, 3709
MspR9I CCNGG 8 cut(s) 7, 964, 1406, 2245, 2352, 3043, 3242, 3524
MunI CAATTG 5 cut(s) 201, 1773, 2568, 3353, 3560
Mva1269I GAATGC 3 cut(s) 602, 1768, 3757
MvaI CCWGG 6 cut(s) 1406, 2245, 2352, 3043, 3242, 3524
NciI CCSGG 2 cut(s) 7, 964
NcoI CCATGG 3 cut(s) 537, 1548, 2985
NdeI CATATG 1 cut(s) 3169
NdeII GATC 9 cut(s) 1004, 1315, 1624, 1834, 1883, 1970, 2127, 2346, 2847
NlaIV GGNNCC 8 cut(s) 89, 208, 760, 1006, 1243, 1410, 1836, 2476
NmuCI GTSAC 1 cut(s) 3101
NsiI ATGCAT 3 cut(s) 3175, 3688, 3844
NspI RCATGY 1 cut(s) 2601
OliI CACNNNNGTG 1 cut(s) 3719
PagI TCATGA 4 cut(s) 237, 850, 2275, 2673
PciSI GCTCTTC 2 cut(s) 197, 3861
PctI GAATGC 3 cut(s) 602, 1768, 3757
PdmI GAANNNNTTC 1 cut(s) 135
PflMI CCANNNNNTGG 2 cut(s) 1325, 2228
PleI GAGTC 3 cut(s) 1561, 1956, 3115
PmaCI CACGTG 1 cut(s) 3599
PmlI CACGTG 1 cut(s) 3599
PpsI GAGTC 3 cut(s) 1561, 1956, 3115
Ppu21I YACGTR 1 cut(s) 3599
PpuMI RGGWCCY 1 cut(s) 2816
PshBI ATTAAT 2 cut(s) 264, 2309
PsiI TTATAA 3 cut(s) 596, 689, 3300
Psp5II RGGWCCY 1 cut(s) 2816
Psp6I CCWGG 6 cut(s) 1404, 2243, 2350, 3041, 3240, 3522
PspCI CACGTG 1 cut(s) 3599
PspGI CCWGG 6 cut(s) 1404, 2243, 2350, 3041, 3240, 3522
PspN4I GGNNCC 8 cut(s) 89, 208, 760, 1006, 1243, 1410, 1836, 2476
PspPI GGNCC 3 cut(s) 88, 2816, 3711
PspPPI RGGWCCY 1 cut(s) 2816
PstI CTGCAG 1 cut(s) 1066
PstNI CAGNNNCTG 2 cut(s) 1493, 1676
PsuI RGATCY 5 cut(s) 1004, 1624, 1834, 1970, 2127
PvuII CAGCTG 5 cut(s) 356, 568, 1493, 1573, 2608
RsaI GTAC 3 cut(s) 31, 564, 1416
RsaNI GTAC 3 cut(s) 30, 563, 1415
RseI CAYNNNNRTG 3 cut(s) 887, 1030, 3719
SapI GCTCTTC 2 cut(s) 197, 3861
Sau3AI GATC 9 cut(s) 1004, 1315, 1624, 1834, 1883, 1970, 2127, 2346, 2847
Sau96I GGNCC 3 cut(s) 88, 2816, 3711
SchI GAGTC 3 cut(s) 1561, 1957, 3116
ScrFI CCNGG 8 cut(s) 7, 964, 1406, 2245, 2352, 3043, 3242, 3524
SduI GDGCHC 5 cut(s) 1663, 1754, 2521, 3617, 3652
SfcI CTRYAG 3 cut(s) 1062, 1602, 2190
SinI GGWCC 3 cut(s) 88, 2816, 3711
SmiMI CAYNNNNRTG 3 cut(s) 887, 1030, 3719
SmlI CTYRAG 4 cut(s) 36, 1036, 1829, 2467
SmoI CTYRAG 4 cut(s) 36, 1036, 1829, 2467
SsiI CCGC 8 cut(s) 1248, 1509, 2008, 2140, 2504, 2565, 2825, 3079
SspI AATATT 4 cut(s) 444, 1209, 1444, 1635
SspMI CTAG 7 cut(s) 893, 1236, 1994, 2342, 2522, 2537, 3177
StyD4I CCNGG 8 cut(s) 5, 962, 1404, 2243, 2350, 3041, 3240, 3522
StyI CCWWGG 8 cut(s) 315, 537, 915, 1548, 2103, 2323, 2985, 3846
TaiI ACGT 5 cut(s) 1501, 2401, 3553, 3586, 3601
TaqI TCGA 4 cut(s) 1212, 1882, 1946, 3733
TatI WGTACW 2 cut(s) 562, 1414
TauI GCSGC 5 cut(s) 1511, 2010, 2142, 2507, 2828
TscAI CASTG 9 cut(s) 490, 523, 1761, 2178, 2517, 2692, 2857, 3279, 3774
TseFI GTSAC 1 cut(s) 3101
Tsp45I GTSAC 1 cut(s) 3101
TspGWI ACGGA 2 cut(s) 1943, 3410
TspRI CASTG 9 cut(s) 490, 523, 1761, 2178, 2517, 2692, 2857, 3279, 3774
Van91I CCANNNNNTGG 2 cut(s) 1325, 2228
VneI GTGCAC 2 cut(s) 1659, 3648
VpaK11BI GGWCC 3 cut(s) 88, 2816, 3711
VspI ATTAAT 2 cut(s) 264, 2309
XapI RAATTY 8 cut(s) 135, 329, 557, 1361, 1514, 2669, 3000, 3347
XceI RCATGY 1 cut(s) 2601
XcmI CCANNNNNNNNNTGG 1 cut(s) 1252
XmnI GAANNNNTTC 1 cut(s) 135
XspI CTAG 7 cut(s) 893, 1236, 1994, 2342, 2522, 2537, 3177
Zsp2I ATGCAT 3 cut(s) 3175, 3688, 3844
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.