Rh4CG298300

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
55846348 .. 55851008
4661 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG298300.1

Sequence Viewer

Length: 3435 bp
ATGTCATGCTGGATGAGCACTGGAGAGAGACAGGCTGCACGAATACGAAGTTTATACTTGAAGACCATACTGAGGCAAGATGTCAGCTTTTTTGATCAAGAAATCAACTCTGGGGAAATTCTTGGGAGGATGTCAGGTGATACTCTGCTCATTAAAGAGGCAATGGGCGAGAAGGTAGGAACTTTTTTCCAAGTAGTTGCAACATTCATAGGCAGCTACTTTATAGCATTTTTTAAGGGATGGCTTCTCACCCTTGTCATGCTATCCTCTATTCCCCCTCTTGTCTTATCTGGTGCTGTCATGAACCATTTCATAGTGAAATTGGCGTCCCATGGACAAGCTGCATATTCAGGAGGAGCAATTGTGGTAGAGGAGACAATTGGTTCTATCAGAACTGTTGCATCGTTCACAGGGGAGAAGCAAGCTATATCTAACTACAATAACTCCTTGAATAAAGCTTACAAGTCCGGTGTGCAAGAGGGTTGGGCATCTGGTTTGGGTTCTGGTGTACTTATGCTTTTGGTATTCTGTACTTATGCTTTGGCCGTATGGTTTGGTGGAATAATGATACTTGAAAAAGGATACAAGGGAGAAGATGCCATGATAGTAATTTTTGCTGTGGTAATTGGCTCACTATCTCTTGGGAAAGTGTCTCCTTGCATCACTGCATTTGCTCCTGGACAAGCTGTAGCTTATAAGATGTTTGAGACAATTAACAGAAAGCCAAAGATAGATGCGTATGATACTAATGGGAGGGTATTACAAGATATTCGTGGAGACATAGAACTGAGGGATGTTTGTTTTAGTTATCCCACAAGACTGGATGAGCAAATATTCAATGGATTTTGTCTCTCAATACCTAGTGGTGCGACTGCTGCTTTGGTTGGAGAAAGCGGAAGTGGTAAATCAACTGTACTCAGTTTGATTGAGAGATTTTATGACCCCCAGGATGGTGAAGTTCTTATTGATTGTGTTAATATCAAAGAGTTCCAACTGAAATGGATCAGACAGAAAATTGGCCTTGTATGCCAGGAACCAGTTTTGTTTACTGGTAGCATTAAAGATAATATTGCGTTTGGAAAGGATGGTGCTACTACTGAAGAGGTAGCGACTGCTGCTGAGCTTGCCAATGCTGCAAAATTCATAGCTTTACTGCCTCAGGGAATAGATACACTGGTTGGTGAGCATGGAACTCAACTATCTGGGGGACAAAAGCAAAGAGTTGCTATAGCTAGAGTAATTCTGAAGAACCCAAGAATTTTACTTTTAGATGAAGCCACAAGCGCTCTTGACACAGAATCTGAAAGAGTTGTTCAGGAGGCACTGGACAGAATTATGGTTGACCGGACTACTATCATTGTAGCCCATCGCTTGAGCACTGTAAGGAATGCTGATACCATTGCTGTCATACATCACGGAACAATTGCTGAGAAAGGGCAACATTCTGAGCTAAGCAAGGATCCCGATGGAGCATATAGCAGGCTTATAAGGTTGCAAGAAACTAGTTCTGTGTCAGAACACTCGGAACATACTTGTCTAAGTTCTGAGAAATCATCTCCAAGAAGTGGTAGTCGTCACTCATTCTCAATCTCAAATGGTAATCCTACTGCAAGCGGTATCCTTGAAACAACAACTGTAGAACCTGATGTTCCTGCTTCAGTACCATCAGAAGGGCCTCCAGGAGTCTCTCTTCGCCGCCTTGCTTACCTGAACAAGCCAGAGATACCAGTGCTACTTCTAGGTACTATAGTTGCAGCAGTCAATGGGGTAATCTTCCCTGTTTATGGTAGTTTGTTGTCAAGTGTAATCAAGACCTTCTTTGAGCCACCTCATGAACTCCGTAAGCATTCCAAGTTTTGGGCAACAATCTTTGTTGTTCTTGGAGTGGTATCTTTCTTAGCACAATCATCAAGAGCGTACCTCTTTGCCGTGGCGGGTTGCAGGTTAATAAGAAGAGTCCGAGCAATGTGCTTTGAGAAGGTGGTTTACATGGAAGTAAGTTGGTTCGATGAAGCTGAGCACTCAAGTGGTGCCATTGGAGCAAGGCTTTCTACAGATGCAGCGTCTTTGAGAGGGCTTGTTGGAGATGCTCTTGGTTTGTTGATTCAGAATACGGCAACAGCAATTACAGGGATGATTATTGCTTTTAGTGCAAATTGGCAACTTTCTCTTGTAATCCTTGTTCTGTTACCCTTATTAGGAGTAAATGGATATTTTCAAGTGCAGTACATGAAAGGATTCAGTGCAAATGCAAAGAAAATGTACGAGGATGCAAGCCAAGTAGCTAGTGATGCTGTGGGGAGTATTCGGACAATTGCTTCCTTTTGTGCTGAAGAGAAGGTGATTGAGTTGTACAAGAAAAAATGTGACGGCCCTATTAAGACAGGGATAAGACAAGGGATAGTTACTGGGATAGGTTTCGGGGTATCACTCTTTTTACAGTTTTCAGTGTTTGCCTTGATTTTTTATACTGGAGGTCTACTTGTTGCAGCAGGCAAGACAACATTCTTTGCTGTTTTCCAGGCTTTCTTTGCTCTCACTATTGCTTCTCTCGGACTTGCGCAGTCGAGCTCCCTAGCACCTGATGTTAGTAAAGGAAAGAGCTCTGCTGCTTCCATATTTGCAATTCTTGACCGGAAATCAAAAATAGACTCTAGTGATAACTCGGGCATGACAATAGAGAATGTGATGGGAGAAATTGAATTTCAGCATGTCAATTTCAAGTATCCTAGTAGACCTAAAGTGCCAATTTTCAACGATCTTTGCTTGAGCATTAGTTGTGGCAAGACAATTGCTCTGGTTGGTGAAAGTGGGAGTGGAAAATCGACAGTGATCTCTTTGATCCAGAGATTTTACGACCCCAATGCTGGTCACATTACATTGGATGGAATCGAAATCCAGAAACTACAGTTGAGGTGGTTAAGAAAGCAAATGGGGCTGGTGAGCCAGGAGCCTCCGCTGTTTAATGACACCATCCGAGCCAACATTGCATATGGAAAGGGAGGAGAGGCAACCGAGGCTGAAGTTATAGCTGCAGCAGAACTGGCAAATGCACAAGAGTTCATTAGTAGTTTACAACATGGTTATGATACAATAGTAGGAGAGCGAGGGGTCCAATTGTCCGGTGGACAGAAGCAAAGAGTTGCTATTGCACGAGCTATTTTGAAGGCACCAAAGATATTACTACTTGATGAAGCCACTAGTGCTCTTGATGCTGAATCCGAACGAGTGGTTCAAGATGCACTGGACCGAGTTATGGTGGATCGAACCACAGTGGTTGTTGCCCATCGGTTTTCCACAATAAAAGGTGCTGATGTCATTGCTGTGGTAAAAAATGGAGTCATTGCAGAGAAAGGGAAGCATGAAAGTTTGATCAGAATCAACAATGGCATTTATGCTTCTTTGGTAGCATTACATGCAAGTGCCTCATCTTAG

Protein Analysis

1144

Amino Acids

123.26

Weight (kDa)

7.27

Isoelectric Point (pI)

34.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 2 - 212 3.7e-47 ABC transporter transmembrane region
ABC_tran PF00005 281 - 428 3.6e-31 ABC transporter
ABC_membrane PF00664 578 - 850 1.5e-54 ABC transporter transmembrane region
ABC_tran PF00005 919 - 1068 7e-34 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 696, 1487
Acc16I TGCGCA 1 cut(s) 2562
Acc36I ACCTGC 1 cut(s) 1932
AccB1I GGYRCC 2 cut(s) 2030, 3169
AccB7I CCANNNNNTGG 2 cut(s) 1565, 1857
AccI GTMKAC 2 cut(s) 2479, 2734
AciI CCGC 5 cut(s) 894, 1614, 1696, 1934, 2957
AclWI GGATC 5 cut(s) 1010, 1454, 1467, 2836, 3270
AcoI YGGCCR 1 cut(s) 543
AcsI RAATTY 4 cut(s) 117, 1139, 1257, 2702
AcuI CTGAAG 5 cut(s) 1119, 1265, 1641, 2352, 3042
AcyI GRCGYC 1 cut(s) 326
AfaI GTAC 9 cut(s) 510, 532, 915, 1662, 1744, 1919, 2228, 2264, 2354
AfeI AGCGCT 1 cut(s) 1285
AfiI CCNNNNNNNGG 9 cut(s) 72, 950, 1565, 1670, 1784, 1857, 2198, 2867, 3256
AhlI ACTAGT 2 cut(s) 1502, 3200
AjnI CCWGG 6 cut(s) 676, 945, 1029, 1678, 2520, 2946
AleI CACNNNNGTG 1 cut(s) 2025
Alw21I GWGCWC 6 cut(s) 20, 1379, 2022, 2573, 2606, 3208
Alw26I GTCTC 7 cut(s) 22, 368, 657, 701, 771, 854, 1690
AlwI GGATC 5 cut(s) 1010, 1454, 1467, 2836, 3270
AlwNI CAGNNNCTG 1 cut(s) 1301
Ama87I CYCGRG 1 cut(s) 2665
Aor51HI AGCGCT 1 cut(s) 1285
AoxI GGCC 4 cut(s) 543, 1018, 1673, 2371
ApoI RAATTY 4 cut(s) 117, 1139, 1257, 2702
ArsI GACNNNNNNTTYG 2 cut(s) 862, 894
Asp700I GAANNNNTTC 2 cut(s) 308, 2237
AspLEI GCGC 2 cut(s) 1286, 2563
AspS9I GGNCC 4 cut(s) 1673, 2372, 3112, 3247
AsuHPI GGTGA 7 cut(s) 149, 241, 965, 1193, 2353, 2816, 2953
AvaI CYCGRG 1 cut(s) 2665
AvaII GGWCC 2 cut(s) 3112, 3247
AxyI CCTNAGG 1 cut(s) 1158
BaeI ACNNNNGTAYC 6 cut(s) 1161, 1194, 1734, 1767, 3081, 3114
BamHI GGATCC 1 cut(s) 1459
BanI GGYRCC 2 cut(s) 2030, 3169
BanII GRGCYC 2 cut(s) 2573, 2606
BarI GAAGNNNNNNTAC 2 cut(s) 1970, 2002
BauI CACGAG 1 cut(s) 3153
BbsI GAAGAC 1 cut(s) 68
Bbv12I GWGCWC 6 cut(s) 20, 1379, 2022, 2573, 2606, 3208
BceAI ACGGC 4 cut(s) 530, 1913, 2130, 2386
BcgI CGANNNNNNTGC 4 cut(s) 1950, 1984, 2846, 2880
BciT130I CCWGG 6 cut(s) 678, 947, 1031, 1680, 2522, 2948
BciVI GTATCC 3 cut(s) 575, 1628, 2736
BclI TGATCA 2 cut(s) 94, 3372
BcoDI GTCTC 7 cut(s) 22, 368, 657, 701, 771, 854, 1690
BcuI ACTAGT 2 cut(s) 1502, 3200
BfaI CTAG 9 cut(s) 861, 1233, 1503, 1739, 2286, 2576, 2655, 2730, 3201
BfmI CTRYAG 7 cut(s) 687, 1227, 1635, 1746, 2052, 2906, 3033
BfoI RGCGCY 1 cut(s) 1287
BfuAI ACCTGC 1 cut(s) 1932
BfuI GTATCC 3 cut(s) 575, 1628, 2736
BlpI GCTNAGC 3 cut(s) 1119, 1451, 2016
Bme1390I CCNGG 6 cut(s) 678, 947, 1031, 1680, 2522, 2948
Bme18I GGWCC 2 cut(s) 3112, 3247
BmeT110I CYCGRG 1 cut(s) 2665
BmgT120I GGNCC 4 cut(s) 1673, 2372, 3112, 3247
BmiI GGNNCC 6 cut(s) 1035, 1461, 2032, 2952, 3113, 3171
BmrFI CCNGG 6 cut(s) 678, 947, 1031, 1680, 2522, 2948
BmrI ACTGGG 1 cut(s) 2418
BmuI ACTGGG 1 cut(s) 2418
BpiI GAAGAC 1 cut(s) 68
BplI GAGNNNNNCTC 2 cut(s) 1905, 1937
BpmI CTGGAG 3 cut(s) 42, 1662, 2493
Bpu1102I GCTNAGC 3 cut(s) 1119, 1451, 2016
BpuEI CTTGAG 3 cut(s) 1393, 2008, 2788
BsaBI GATNNNNATC 1 cut(s) 3377
BsaHI GRCGYC 1 cut(s) 326
BsaJI CCNNGG 4 cut(s) 331, 945, 1929, 3015
BsaWI WCCGGW 4 cut(s) 467, 1344, 2634, 3122
BsaXI ACNNNNNCTCC 4 cut(s) 348, 378, 428, 458
Bsc4I CCNNNNNNNGG 9 cut(s) 72, 950, 1565, 1670, 1784, 1857, 2198, 2867, 3256
Bse21I CCTNAGG 1 cut(s) 1158
Bse3DI GCAATG 6 cut(s) 168, 1398, 1971, 2985, 3318, 3342
Bse8I GATNNNNATC 1 cut(s) 3377
BseBI CCWGG 6 cut(s) 678, 947, 1031, 1680, 2522, 2948
BseDI CCNNGG 4 cut(s) 331, 945, 1929, 3015
BseJI GATNNNNATC 1 cut(s) 3377
BseLI CCNNNNNNNGG 9 cut(s) 72, 950, 1565, 1670, 1784, 1857, 2198, 2867, 3256
BseMI GCAATG 6 cut(s) 168, 1398, 1971, 2985, 3318, 3342
BseMII CTCAG 9 cut(s) 62, 779, 931, 1110, 1172, 1419, 1437, 1536, 2007
BseRI GAGGAG 3 cut(s) 369, 386, 3018
BsgI GTGCAG 2 cut(s) 21, 2243
BshFI GGCC 4 cut(s) 545, 1020, 1675, 2373
BshNI GGYRCC 2 cut(s) 2030, 3169
BsiHKAI GWGCWC 6 cut(s) 20, 1379, 2022, 2573, 2606, 3208
BsiHKCI CYCGRG 1 cut(s) 2665
BsiSI CCGG 4 cut(s) 468, 1345, 2635, 3123
BslFI GGGAC 2 cut(s) 313, 1221
BslI CCNNNNNNNGG 9 cut(s) 72, 950, 1565, 1670, 1784, 1857, 2198, 2867, 3256
BsmAI GTCTC 7 cut(s) 22, 368, 657, 701, 771, 854, 1690
BsmFI GGGAC 2 cut(s) 313, 1221
BsmI GAATGC 2 cut(s) 1393, 1846
BsnI GGCC 4 cut(s) 545, 1020, 1675, 2373
BsoBI CYCGRG 1 cut(s) 2665
Bsp1286I GDGCHC 6 cut(s) 20, 1379, 2022, 2573, 2606, 3208
Bsp1407I TGTACA 1 cut(s) 2352
Bsp143I GATC 8 cut(s) 94, 1002, 1459, 2758, 2832, 2841, 3262, 3372
Bsp1720I GCTNAGC 3 cut(s) 1119, 1451, 2016
Bsp19I CCATGG 1 cut(s) 331
BspACI CCGC 5 cut(s) 894, 1614, 1696, 1934, 2957
BspANI GGCC 4 cut(s) 545, 1020, 1675, 2373
BspCNI CTCAG 9 cut(s) 63, 780, 930, 1111, 1171, 1420, 1438, 1537, 2008
BspHI TCATGA 2 cut(s) 300, 1831
BspLI GGNNCC 6 cut(s) 1035, 1461, 2032, 2952, 3113, 3171
BspMAI CTGCAG 1 cut(s) 3037
BspMI ACCTGC 1 cut(s) 1932
BspPI GGATC 5 cut(s) 1010, 1454, 1467, 2836, 3270
BspT107I GGYRCC 2 cut(s) 2030, 3169
BsrDI GCAATG 6 cut(s) 168, 1398, 1971, 2985, 3318, 3342
BsrGI TGTACA 1 cut(s) 2352
BssECI CCNNGG 4 cut(s) 331, 945, 1929, 3015
BssMI GATC 8 cut(s) 94, 1002, 1459, 2758, 2832, 2841, 3262, 3372
BssNI GRCGYC 1 cut(s) 326
BssSI CACGAG 1 cut(s) 3153
BssT1I CCWWGG 1 cut(s) 331
Bst2BI CACGAG 1 cut(s) 3153
Bst2UI CCWGG 6 cut(s) 678, 947, 1031, 1680, 2522, 2948
Bst4CI ACNGT 8 cut(s) 397, 913, 1381, 1636, 2442, 2830, 2910, 3274
Bst6I CTCTTC 4 cut(s) 1095, 1695, 1948, 2328
BstACI GRCGYC 1 cut(s) 326
BstAPI GCANNNNNTGC 1 cut(s) 3416
BstAUI TGTACA 1 cut(s) 2352
BstC8I GCNNGC 6 cut(s) 423, 1125, 1481, 1612, 2275, 2494
BstDSI CCRYGG 2 cut(s) 331, 1929
BstH2I RGCGCY 1 cut(s) 1287
BstHHI GCGC 2 cut(s) 1286, 2563
BstKTI GATC 8 cut(s) 97, 1005, 1462, 2761, 2835, 2844, 3265, 3375
BstMAI GTCTC 7 cut(s) 22, 368, 657, 701, 771, 854, 1690
BstMBI GATC 8 cut(s) 94, 1002, 1459, 2758, 2832, 2841, 3262, 3372
BstNI CCWGG 6 cut(s) 678, 947, 1031, 1680, 2522, 2948
BstNSI RCATGY 2 cut(s) 2714, 3419
BstSCI CCNGG 6 cut(s) 676, 945, 1029, 1678, 2520, 2946
BstSFI CTRYAG 7 cut(s) 687, 1227, 1635, 1746, 2052, 2906, 3033
BstV2I GAAGAC 1 cut(s) 68
BstX2I RGATCY 1 cut(s) 1459
BstXI CCANNNNNNTGG 1 cut(s) 820
BstYI RGATCY 1 cut(s) 1459
Bsu36I CCTNAGG 1 cut(s) 1158
BsuI GTATCC 3 cut(s) 575, 1628, 2736
BsuRI GGCC 4 cut(s) 545, 1020, 1675, 2373
BtgI CCRYGG 2 cut(s) 331, 1929
BtgZI GCGATG 1 cut(s) 1352
BtsI GCAGTG 1 cut(s) 663
BveI ACCTGC 1 cut(s) 1932
Cac8I GCNNGC 6 cut(s) 423, 1125, 1481, 1612, 2275, 2494
CaiI CAGNNNCTG 1 cut(s) 1301
CciI TCATGA 2 cut(s) 300, 1831
CfoI GCGC 2 cut(s) 1286, 2563
Cfr13I GGNCC 4 cut(s) 1673, 2372, 3112, 3247
CseI GACGC 2 cut(s) 315, 2052
Csp6I GTAC 9 cut(s) 509, 531, 914, 1661, 1743, 1918, 2227, 2263, 2353
CspCI CAANNNNNGTGG 2 cut(s) 3259, 3294
CviQI GTAC 9 cut(s) 509, 531, 914, 1661, 1743, 1918, 2227, 2263, 2353
DpnI GATC 8 cut(s) 96, 1004, 1461, 2760, 2834, 2843, 3264, 3374
DpnII GATC 8 cut(s) 94, 1002, 1459, 2758, 2832, 2841, 3262, 3372
EaeI YGGCCR 1 cut(s) 543
Eam1104I CTCTTC 4 cut(s) 1095, 1695, 1948, 2328
EarI CTCTTC 4 cut(s) 1095, 1695, 1948, 2328
Ecl136II GAGCTC 2 cut(s) 2571, 2604
Eco130I CCWWGG 1 cut(s) 331
Eco24I GRGCYC 2 cut(s) 2573, 2606
Eco47I GGWCC 2 cut(s) 3112, 3247
Eco47III AGCGCT 1 cut(s) 1285
Eco53kI GAGCTC 2 cut(s) 2571, 2604
Eco57I CTGAAG 5 cut(s) 1119, 1265, 1641, 2352, 3042
Eco81I CCTNAGG 1 cut(s) 1158
Eco88I CYCGRG 1 cut(s) 2665
EcoICRI GAGCTC 2 cut(s) 2571, 2604
EcoO109I RGGNCCY 1 cut(s) 1673
EcoRII CCWGG 6 cut(s) 676, 945, 1029, 1678, 2520, 2946
EcoT14I CCWWGG 1 cut(s) 331
EcoT38I GRGCYC 2 cut(s) 2573, 2606
ErhI CCWWGG 1 cut(s) 331
FalI AAGNNNNNCTT 2 cut(s) 1802, 1834
FaqI GGGAC 2 cut(s) 313, 1221
FauI CCCGC 1 cut(s) 1927
FauNDI CATATG 1 cut(s) 2992
FbaI TGATCA 2 cut(s) 94, 3372
FblI GTMKAC 2 cut(s) 2479, 2734
FriOI GRGCYC 2 cut(s) 2573, 2606
FspBI CTAG 9 cut(s) 861, 1233, 1503, 1739, 2286, 2576, 2655, 2730, 3201
FspI TGCGCA 1 cut(s) 2562
GlaI GCGC 2 cut(s) 1285, 2562
GsuI CTGGAG 3 cut(s) 42, 1662, 2493
HaeII RGCGCY 1 cut(s) 1287
HaeIII GGCC 4 cut(s) 545, 1020, 1675, 2373
HapII CCGG 4 cut(s) 468, 1345, 2635, 3123
HgaI GACGC 2 cut(s) 315, 2052
HhaI GCGC 2 cut(s) 1286, 2563
Hin1I GRCGYC 1 cut(s) 326
Hin6I GCGC 2 cut(s) 1284, 2561
HinP1I GCGC 2 cut(s) 1284, 2561
HincII GTYRAC 1 cut(s) 1342
HindII GTYRAC 1 cut(s) 1342
HindIII AAGCTT 1 cut(s) 456
HpaII CCGG 4 cut(s) 468, 1345, 2635, 3123
HphI GGTGA 7 cut(s) 149, 241, 965, 1193, 2353, 2816, 2953
Hpy166II GTNNAC 9 cut(s) 408, 509, 1047, 1342, 1987, 2480, 2735, 3074, 3128
Hpy8I GTNNAC 9 cut(s) 408, 509, 1047, 1342, 1987, 2480, 2735, 3074, 3128
HpyAV CCTTC 6 cut(s) 166, 1664, 1825, 1972, 2332, 3160
HpyCH4III ACNGT 8 cut(s) 397, 913, 1381, 1636, 2442, 2830, 2910, 3274
Hsp92I GRCGYC 1 cut(s) 326
HspAI GCGC 2 cut(s) 1284, 2561
Ksp22I TGATCA 2 cut(s) 94, 3372
Kzo9I GATC 8 cut(s) 94, 1002, 1459, 2758, 2832, 2841, 3262, 3372
LmnI GCTCC 6 cut(s) 356, 679, 1469, 2039, 2576, 2950
MaeI CTAG 9 cut(s) 861, 1233, 1503, 1739, 2286, 2576, 2655, 2730, 3201
MaeIII GTNAC 5 cut(s) 1574, 2187, 2366, 2404, 2870
MalI GATC 8 cut(s) 96, 1004, 1461, 2760, 2834, 2843, 3264, 3374
MboI GATC 8 cut(s) 94, 1002, 1459, 2758, 2832, 2841, 3262, 3372
MboII GAAGA 8 cut(s) 73, 605, 1112, 1258, 1682, 1765, 1965, 2345
MfeI CAATTG 6 cut(s) 360, 378, 1422, 2313, 2790, 3116
MflI RGATCY 1 cut(s) 1459
MhlI GDGCHC 6 cut(s) 20, 1379, 2022, 2573, 2606, 3208
MlyI GAGTC 4 cut(s) 1692, 1965, 2645, 3348
MmeI TCCRAC 3 cut(s) 865, 1015, 2062
MroXI GAANNNNTTC 2 cut(s) 308, 2237
MseI TTAA 9 cut(s) 153, 234, 714, 975, 1059, 1946, 2379, 2921, 2964
MslI CAYNNNNRTG 4 cut(s) 2025, 3084, 3323, 3420
MspA1I CMGCKG 1 cut(s) 2959
MspI CCGG 4 cut(s) 468, 1345, 2635, 3123
MspR9I CCNGG 6 cut(s) 678, 947, 1031, 1680, 2522, 2948
MunI CAATTG 6 cut(s) 360, 378, 1422, 2313, 2790, 3116
Mva1269I GAATGC 2 cut(s) 1393, 1846
MvaI CCWGG 6 cut(s) 678, 947, 1031, 1680, 2522, 2948
NcoI CCATGG 1 cut(s) 331
NdeI CATATG 1 cut(s) 2992
NdeII GATC 8 cut(s) 94, 1002, 1459, 2758, 2832, 2841, 3262, 3372
NlaIV GGNNCC 6 cut(s) 1035, 1461, 2032, 2952, 3113, 3171
NmuCI GTSAC 3 cut(s) 1574, 2366, 2870
NsbI TGCGCA 1 cut(s) 2562
NspI RCATGY 2 cut(s) 2714, 3419
OliI CACNNNNGTG 1 cut(s) 2025
PagI TCATGA 2 cut(s) 300, 1831
PctI GAATGC 2 cut(s) 1393, 1846
PdmI GAANNNNTTC 2 cut(s) 308, 2237
PfeI GAWTC 6 cut(s) 1298, 2104, 2238, 2889, 3218, 3378
PflMI CCANNNNNTGG 2 cut(s) 1565, 1857
PfoI TCCNGGA 2 cut(s) 676, 1678
PleI GAGTC 4 cut(s) 1691, 1964, 2645, 3347
PpsI GAGTC 4 cut(s) 1691, 1964, 2645, 3347
PsiI TTATAA 2 cut(s) 696, 1487
Psp124BI GAGCTC 2 cut(s) 2573, 2606
Psp6I CCWGG 6 cut(s) 676, 945, 1029, 1678, 2520, 2946
PspGI CCWGG 6 cut(s) 676, 945, 1029, 1678, 2520, 2946
PspN4I GGNNCC 6 cut(s) 1035, 1461, 2032, 2952, 3113, 3171
PspPI GGNCC 4 cut(s) 1673, 2372, 3112, 3247
PsrI GAACNNNNNNTAC 2 cut(s) 2166, 2198
PstI CTGCAG 1 cut(s) 3037
PstNI CAGNNNCTG 1 cut(s) 1301
PsuI RGATCY 1 cut(s) 1459
RsaI GTAC 9 cut(s) 510, 532, 915, 1662, 1744, 1919, 2228, 2264, 2354
RsaNI GTAC 9 cut(s) 509, 531, 914, 1661, 1743, 1918, 2227, 2263, 2353
RseI CAYNNNNRTG 4 cut(s) 2025, 3084, 3323, 3420
SacI GAGCTC 2 cut(s) 2573, 2606
SaqAI TTAA 9 cut(s) 153, 234, 714, 975, 1059, 1946, 2379, 2921, 2964
Sau3AI GATC 8 cut(s) 94, 1002, 1459, 2758, 2832, 2841, 3262, 3372
Sau96I GGNCC 4 cut(s) 1673, 2372, 3112, 3247
SchI GAGTC 4 cut(s) 1692, 1965, 2645, 3348
ScrFI CCNGG 6 cut(s) 678, 947, 1031, 1680, 2522, 2948
SduI GDGCHC 6 cut(s) 20, 1379, 2022, 2573, 2606, 3208
SfcI CTRYAG 7 cut(s) 687, 1227, 1635, 1746, 2052, 2906, 3033
SinI GGWCC 2 cut(s) 3112, 3247
SmiMI CAYNNNNRTG 4 cut(s) 2025, 3084, 3323, 3420
SmlI CTYRAG 3 cut(s) 1372, 2023, 2767
SmoI CTYRAG 3 cut(s) 1372, 2023, 2767
SpeI ACTAGT 2 cut(s) 1502, 3200
SsiI CCGC 5 cut(s) 894, 1614, 1696, 1934, 2957
SspI AATATT 2 cut(s) 834, 1069
SspMI CTAG 9 cut(s) 861, 1233, 1503, 1739, 2286, 2576, 2655, 2730, 3201
SstI GAGCTC 2 cut(s) 2573, 2606
StyD4I CCNGG 6 cut(s) 676, 945, 1029, 1678, 2520, 2946
StyI CCWWGG 1 cut(s) 331
TaaI ACNGT 8 cut(s) 397, 913, 1381, 1636, 2442, 2830, 2910, 3274
TaqI TCGA 5 cut(s) 2007, 2567, 2825, 2892, 3265
TaqII GACCGA 1 cut(s) 3264
TatI WGTACW 5 cut(s) 508, 530, 913, 2226, 2352
TauI GCSGC 1 cut(s) 1698
TfiI GAWTC 6 cut(s) 1298, 2104, 2238, 2889, 3218, 3378
Tru1I TTAA 9 cut(s) 153, 234, 714, 975, 1059, 1946, 2379, 2921, 2964
Tru9I TTAA 9 cut(s) 153, 234, 714, 975, 1059, 1946, 2379, 2921, 2964
TseFI GTSAC 3 cut(s) 1574, 2366, 2870
Tsp45I GTSAC 3 cut(s) 1574, 2366, 2870
TspGWI ACGGA 2 cut(s) 1431, 1829
Van91I CCANNNNNTGG 2 cut(s) 1565, 1857
VpaK11BI GGWCC 2 cut(s) 3112, 3247
XapI RAATTY 4 cut(s) 117, 1139, 1257, 2702
XceI RCATGY 2 cut(s) 2714, 3419
XcmI CCANNNNNNNNNTGG 1 cut(s) 3122
XmiI GTMKAC 2 cut(s) 2479, 2734
XmnI GAANNNNTTC 2 cut(s) 308, 2237
XspI CTAG 9 cut(s) 861, 1233, 1503, 1739, 2286, 2576, 2655, 2730, 3201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.