FvH4_4g21620

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
24651986 .. 24657418
5433 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g21620.t1

Sequence Viewer

Length: 3786 bp
ATGGCTGAGGAGAGTGGAGATGCAATCACCAAGCAGGACACAGCATCAGCAGTGTCGGAGCGTTCCAAAGAAAACCGACAAGATATAAGCAAGAGCAAGGAGGATGGAACTAAAACAGTACCACTTTACAAGCTTTTCTCCTTTGCTGATTCCACGGATTACCTACTAATGTTTGTTGGTACTATCGGTGCTATTGTTAATGGACTCTCTATGCCTCTACTGATCCTAGTCATGGGAGATATGATTACTTCTTTTGGAGAAACTGGAAATGACAAGAGAGAGTCTGCTGTAGTTTCTAAGGTGGCTCTGAAGTTCATTTACTTAGCTTTTGGGGGTGCTGCTGCAGCCTTTCTGCAAATGTCTTGCTGGATGATCACTGGAGAGAGACAGGCTGCAAGGATTAGAAGCTTATACTTGAAAACAATATTAAGGCAAGATGTCGGTTTTTTTGATAAAGAAACCACCAGTGGGGAAATCATTGGAAGGATGTCAGGTGATACTGTGCTCATCCAAGAGGCAATGGGAGAGAAGATAGGAAGTTTTATCCAGTTAGTTGCAACATTTATAGGTGGTTTTGTTATAGCATTTTCTGAGGGATGGCTTCTCACTCTTGTCATGCTATCCTCTATTCCCGCTCTTGTGTTCTCTGGTGCTGTCATGAACCATTTCATAGTGAAATTGGCGTCTCGTGGACAAGCTGCATATTCAGGAGGAGCAAGTGTGGTAGACGAGACAATTAGTTCGATCAGAACTGTGGCATCATTCACTGGGGAGAAGCAAGCTATATCTAATTACAACAACTCATTGCATAAGGCTTACAAGTCCGGTGTACAAGAGGGTTGGGCGTCTGGTTTGGGTTTTGGTGTGCTTATGCTTGTGGTATTTTGTACTTACGCCTTGGCTGTATGGTTCGGTGGAATAATGATACTTGAAAGAGGATATAAGGGAGGAGATGTCATGACAGTAATTTTTTCTGTGTTAATTGGCTCAGTGTCTCTTGGGAAAGCATCTCCATGTATAAGTGCATTTGCTCCTGGACAAGCGGCAGCTTACAAGATGTTTGAGGCAATTAATAGAAAGCCGAAGATAGATGTGTATGATATTAATGGGCGAGTTTTACAAGATATTTGTGGAGACATAGAACTGAGGGATGTTTATTTTAGTTATCCCACAAGACCTAATGAACAATTATTCAATGGATTTTCACTCTCAATACCTAGCGGTTCAACTGCTGCTTTGGTTGGACAGAGCGGAAGTGGTAAATCAACTGTTATCAGTTTGATTGAGAGATTTTACGACCCCCAGGCTGGTGAAGTACTTATTGATGGTGTTAATCTTAAAGAGTTCCAATTAAAATGGATACGACAGAAAATTGGCCTTGTCAACCAGGAACCAGTTTTATTTACTGGTAGCATTAAAGATAATATTGCCTATGGAAAGGATGGTGCAACAACTGAGGAAATAAGGGCTGCAGCTGAGCTTTCCAATGCTGCAAAATTCATAGATATACTACCTGAGGGAATAGACACAATGGTTGGTGAGCATGGAACTCAGCTATCTGGGGGACAAAAACAACGAATTGCTATAGCTAGAGCAATTCTGAAGAACCCGAGAATTCTACTTTTAGATGAAGCGACAAGTGCTCTTGACACACAATCTGAGAGAATTGTGCAGGAGGCACTGGACAGAGTAATGATCAACCGAACTACTGTCATTGTAGCCCACCGCTTGAGCACAGTTAGGAATGCTGACACCATTACTGTAATACATCAAGGAGCAATTGTTGAACAAGGACCGCATTCTGAGCTAATTAAGGATCCTGATGGAACATATAGCCAGCTTGTAAGGTTGCAAGCAACTAGTAGCGTGTCAGAATATACTGGTCTAAATGTTGAGGTATCATCTCCAAGAAGAAGTAGTAGTCGTCACTCATTCTCAATCTCATACAGTATTCCTACTGCAAGTGGTGTCCTTGAAACAAGACCTTCAGAACTTGATATTCATGCTACAACACCATCAAAAGGGCCTCCCGATGTCTCTCTTCGTCGCCTGGCTTACCTGAACAAGCCAGAGATACTTGTGCTACTTTTAGGTACTATAGTTGCAGCGGTCAATGGAGTAATCTTCCCTATTTATGGTAGTTTGTTGTCAAGTGTAATCAAAACCTTCTTTGAACCGCCTCATGAACTCCGCAAGCACTCAAAATTTTGGGCATTGATCTTTGTTGTTCTTGGAGTGGTATCTTTCTTGGCACAATCATCAAGAGCATACCTCTTTGCCTTGGCGGGTTGCAGGTTGATAAGAAGAGTCCGAGCAATGTGCTTTGAGAAGGTGGTTTACATGGAAGTAAGTTGGTTTGATGAAGCTGAGCACTCAAGTGGTGCAATCGGGGCAAGGCTTTCTACAGATGCAGCGTCTTTAAGAGGGCTTGTTGGAGATTCTCTTGGTTTGTTGGTTCAGAATACAGCAACTGCAATTGCGGGGATGATTATTGCTTTTGGTGCAAACTGGCAACTTTCTCTTGTAATGCTTGTTCTGTTACCTTTATTAGGAGTAAATGGATATTTTCAAGTCCAGTACATGAAAGGATTCAGTGCAGATGCAAAGACAATGTATGAGGATGCAAGCCACGTAGCTAGTGATGCTGTGGGGAGTATTCGGACAATTGCTTCCTTTTGTGCTGAAGAGAAGGTAATTGAGTTGTACAAGAAAAAATGTGAAAGCCCTATTAAGACGGGGATACGACAAGGGCTGGTTTCTGGGATAGGTTTTGGATTATCTCTTTTCTTGCAGTTTTCAGTGTTCGCCGTAATTTTTTATATTGGAGGTCTGCTTGTTGCAGCAGGCAAGACAACATTCTCTGCTGTTTTCCAGGTTTTCTTTGCTGTCACTATGGCTTCTTTTGGACTTGCTCAGTCAAGCTCCCTTGCACCTGATGTAAGTAAAGGAAAGGGTTCTGCTGCTTCAATATTCGCAATTCTTGACATGAAATCAAAAATAGACTCTAGTGATAACTCGGGCATGACAATAGAAAATGTGAAGGGAGAAATTGAATTTCACCATGTCAGTTTCAAGTATCCTAGCAGACCTAACGTGCAAATTTTCAACGATCTTTGCCTAACCATTACTGATGGCAAGACAATTGCTCTGGTTGGTGAAAGTGGAAGTGGGAAATCAACAGTGGTCTCTTTGATTCAGAGATTTTACAACCCCAACTCTGGTCACATTACATTGGATGGAATTGAAATCCAGAAACTACAGTTGAAGTGGTTGAGACAAAAAATGGGGCTGGTGAGCCAGGAGCCTATGTTGTTCAACAACACTATCCGAGCCAACATTGCATATGGGAAGGAAGGAGAGGCAACCGAGGCAGAAATTATTGCTGCTGCAGAACTTGCAAATGCTCACCAGTTCATTAGTAGTTTACAACATGGTTATGATACTGTAACTGGAGAAAGAGGGGTCCAATTGTCTGGTGGACAGAAGCAAAGAGTTGCTATTGCAAGAGCTATAATGAAGGCACCAAAGATATTACTACTAGATGAAGCCACAAGTGCTCTTGATGCTGAATCCGAACGAGTGGTTCAAGACGCACTGGACCGAGTTATGGTTGATCGAACCACAGTGGTGGTTGCCCATCGGTTATCCACAATAAAAGCTTCTGATTTGATTGCAGTGGTAAAAAATGGAGTCATTGCAGAGAAAGGGAAACATGAAAGTTTAACAAAAATCAAGAATGGAATATATGCTTCTTTGGTAGCATTACATGCAAGTGCCTCATCTTAG

Protein Analysis

1262

Amino Acids

135.97

Weight (kDa)

7.6

Isoelectric Point (pI)

33.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 57 - 331 1.3e-59 ABC transporter transmembrane region
ABC_tran PF00005 399 - 547 4.2e-33 ABC transporter
ABC_membrane PF00664 695 - 967 1e-54 ABC transporter transmembrane region
ABC_tran PF00005 1036 - 1185 7.4e-34 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2283
AccB1I GGYRCC 1 cut(s) 3520
AccBSI CCGCTC 2 cut(s) 635, 1251
AccI GTMKAC 1 cut(s) 726
AclWI GGATC 3 cut(s) 217, 1811, 1824
AcsI RAATTY 5 cut(s) 1496, 1614, 2204, 3053, 3099
AcuI CTGAAG 4 cut(s) 329, 1622, 1971, 2703
AcyI GRCGYC 2 cut(s) 683, 845
AfaI GTAC 8 cut(s) 120, 181, 831, 889, 1317, 2095, 2579, 2705
AfiI CCNNNNNNNGG 8 cut(s) 232, 468, 1307, 2021, 2135, 2549, 3218, 3607
AhlI ACTAGT 1 cut(s) 1859
AjnI CCWGG 6 cut(s) 1033, 1302, 1386, 2049, 2871, 3297
AleI CACNNNNGTG 2 cut(s) 2376, 3626
Alw21I GWGCWC 5 cut(s) 507, 1645, 1736, 2373, 3559
Alw26I GTCTC 8 cut(s) 379, 690, 725, 999, 1128, 2041, 3190, 3268
AlwI GGATC 3 cut(s) 217, 1811, 1824
AlwNI CAGNNNCTG 1 cut(s) 2471
Ama87I CYCGRG 2 cut(s) 1609, 3016
AoxI GGCC 2 cut(s) 1375, 2024
ApoI RAATTY 5 cut(s) 1496, 1614, 2204, 3053, 3099
ArsI GACNNNNNNTTYG 2 cut(s) 724, 756
AseI ATTAAT 2 cut(s) 1071, 1104
Asp700I GAANNNNTTC 3 cut(s) 665, 2588, 2953
AspS9I GGNCC 4 cut(s) 1793, 2024, 3463, 3598
AsuHPI GGTGA 8 cut(s) 19, 506, 1322, 1550, 3050, 3167, 3304, 3398
AvaI CYCGRG 2 cut(s) 1609, 3016
AvaII GGWCC 3 cut(s) 1793, 3463, 3598
AxyI CCTNAGG 1 cut(s) 1515
BaeI ACNNNNGTAYC 2 cut(s) 2085, 2118
BamHI GGATCC 1 cut(s) 1816
BanI GGYRCC 1 cut(s) 3520
BarI GAAGNNNNNNTAC 4 cut(s) 302, 334, 2321, 2353
BauI CACGAG 1 cut(s) 687
Bbv12I GWGCWC 5 cut(s) 507, 1645, 1736, 2373, 3559
BbvCI CCTCAGC 1 cut(s) 6
BccI CCATC 9 cut(s) 98, 591, 1319, 1436, 1817, 2023, 3125, 3230, 3645
BceAI ACGGC 1 cut(s) 2792
BcgI CGANNNNNNTGC 2 cut(s) 2301, 2335
BciT130I CCWGG 6 cut(s) 1035, 1304, 1388, 2051, 2873, 3299
BciVI GTATCC 3 cut(s) 1353, 2733, 3087
BclI TGATCA 2 cut(s) 372, 1695
BcoDI GTCTC 8 cut(s) 379, 690, 725, 999, 1128, 2041, 3190, 3268
BcuI ACTAGT 1 cut(s) 1859
BfaI CTAG 8 cut(s) 227, 1218, 1590, 1860, 2637, 3006, 3081, 3539
BfmI CTRYAG 8 cut(s) 288, 342, 1470, 1584, 2097, 2403, 3257, 3387
BfuAI ACCTGC 1 cut(s) 2283
BfuI GTATCC 3 cut(s) 1353, 2733, 3087
BlpI GCTNAGC 2 cut(s) 1476, 2367
BmcAI AGTACT 1 cut(s) 1317
Bme1390I CCNGG 6 cut(s) 1035, 1304, 1388, 2051, 2873, 3299
Bme18I GGWCC 3 cut(s) 1793, 3463, 3598
BmeT110I CYCGRG 2 cut(s) 1609, 3016
BmgT120I GGNCC 4 cut(s) 1793, 2024, 3463, 3598
BmiI GGNNCC 5 cut(s) 1392, 1818, 3303, 3464, 3522
BmrFI CCNGG 6 cut(s) 1035, 1304, 1388, 2051, 2873, 3299
BmrI ACTGGG 1 cut(s) 777
BmsI GCATC 9 cut(s) 10, 53, 767, 1016, 2398, 2590, 2611, 2632, 3553
BmuI ACTGGG 1 cut(s) 777
BplI GAGNNNNNCTC 2 cut(s) 2256, 2288
BpmI CTGGAG 2 cut(s) 399, 3471
Bpu10I CCTNAGC 1 cut(s) 6
Bpu1102I GCTNAGC 2 cut(s) 1476, 2367
BpuEI CTTGAG 2 cut(s) 1750, 2359
BsaAI YACGTR 1 cut(s) 2632
BsaHI GRCGYC 2 cut(s) 683, 845
BsaI GGTCTC 1 cut(s) 3190
BsaJI CCNNGG 5 cut(s) 153, 897, 1302, 2280, 3366
BsaWI WCCGGW 1 cut(s) 824
BsaXI ACNNNNNCTCC 8 cut(s) 705, 735, 939, 969, 1767, 1797, 3293, 3323
Bsc4I CCNNNNNNNGG 8 cut(s) 232, 468, 1307, 2021, 2135, 2549, 3218, 3607
Bse21I CCTNAGG 1 cut(s) 1515
Bse3DI GCAATG 5 cut(s) 525, 803, 2322, 3336, 3693
BseBI CCWGG 6 cut(s) 1035, 1304, 1388, 2051, 2873, 3299
BseDI CCNNGG 5 cut(s) 153, 897, 1302, 2280, 3366
BseLI CCNNNNNNNGG 8 cut(s) 232, 468, 1307, 2021, 2135, 2549, 3218, 3607
BseMI GCAATG 5 cut(s) 525, 803, 2322, 3336, 3693
BseRI GAGGAG 3 cut(s) 23, 726, 963
BsgI GTGCAG 2 cut(s) 1691, 2616
BshFI GGCC 2 cut(s) 1377, 2026
BshNI GGYRCC 1 cut(s) 3520
BsiHKAI GWGCWC 5 cut(s) 507, 1645, 1736, 2373, 3559
BsiHKCI CYCGRG 2 cut(s) 1609, 3016
BsiSI CCGG 1 cut(s) 825
BslFI GGGAC 1 cut(s) 1578
BslI CCNNNNNNNGG 8 cut(s) 232, 468, 1307, 2021, 2135, 2549, 3218, 3607
BsmAI GTCTC 8 cut(s) 379, 690, 725, 999, 1128, 2041, 3190, 3268
BsmBI CGTCTC 1 cut(s) 690
BsmFI GGGAC 1 cut(s) 1578
BsmI GAATGC 2 cut(s) 1750, 1798
BsnI GGCC 2 cut(s) 1377, 2026
Bso31I GGTCTC 1 cut(s) 3190
BsoBI CYCGRG 2 cut(s) 1609, 3016
Bsp1286I GDGCHC 5 cut(s) 507, 1645, 1736, 2373, 3559
Bsp1407I TGTACA 2 cut(s) 829, 2703
Bsp143I GATC 8 cut(s) 222, 372, 744, 1695, 1816, 2217, 3109, 3613
Bsp1720I GCTNAGC 2 cut(s) 1476, 2367
BspANI GGCC 2 cut(s) 1377, 2026
BspHI TCATGA 3 cut(s) 657, 957, 2182
BspLI GGNNCC 5 cut(s) 1392, 1818, 3303, 3464, 3522
BspMAI CTGCAG 3 cut(s) 346, 1474, 3391
BspMI ACCTGC 1 cut(s) 2283
BspPI GGATC 3 cut(s) 217, 1811, 1824
BspT107I GGYRCC 1 cut(s) 3520
BspTNI GGTCTC 1 cut(s) 3190
BsrBI CCGCTC 2 cut(s) 635, 1251
BsrDI GCAATG 5 cut(s) 525, 803, 2322, 3336, 3693
BsrGI TGTACA 2 cut(s) 829, 2703
BssECI CCNNGG 5 cut(s) 153, 897, 1302, 2280, 3366
BssMI GATC 8 cut(s) 222, 372, 744, 1695, 1816, 2217, 3109, 3613
BssNI GRCGYC 2 cut(s) 683, 845
BssSI CACGAG 1 cut(s) 687
BssT1I CCWWGG 2 cut(s) 897, 2280
Bst2BI CACGAG 1 cut(s) 687
Bst2UI CCWGG 6 cut(s) 1035, 1304, 1388, 2051, 2873, 3299
Bst6I CTCTTC 3 cut(s) 2046, 2299, 2679
BstACI GRCGYC 2 cut(s) 683, 845
BstAPI GCANNNNNTGC 2 cut(s) 3395, 3767
BstAUI TGTACA 2 cut(s) 829, 2703
BstBAI YACGTR 1 cut(s) 2632
BstC8I GCNNGC 6 cut(s) 780, 1838, 1854, 2195, 2626, 2845
BstDSI CCRYGG 1 cut(s) 153
BstENI CCTNNNNNAGG 1 cut(s) 2547
BstKTI GATC 8 cut(s) 225, 375, 747, 1698, 1819, 2220, 3112, 3616
BstMAI GTCTC 8 cut(s) 379, 690, 725, 999, 1128, 2041, 3190, 3268
BstMBI GATC 8 cut(s) 222, 372, 744, 1695, 1816, 2217, 3109, 3613
BstNI CCWGG 6 cut(s) 1035, 1304, 1388, 2051, 2873, 3299
BstNSI RCATGY 1 cut(s) 3770
BstSCI CCNGG 6 cut(s) 1033, 1302, 1386, 2049, 2871, 3297
BstSFI CTRYAG 8 cut(s) 288, 342, 1470, 1584, 2097, 2403, 3257, 3387
BstX2I RGATCY 1 cut(s) 1816
BstXI CCANNNNNNTGG 2 cut(s) 3473, 3628
BstYI RGATCY 1 cut(s) 1816
Bsu36I CCTNAGG 1 cut(s) 1515
BsuI GTATCC 3 cut(s) 1353, 2733, 3087
BsuRI GGCC 2 cut(s) 1377, 2026
BtgI CCRYGG 1 cut(s) 153
BtsI GCAGTG 2 cut(s) 57, 3681
BveI ACCTGC 1 cut(s) 2283
Cac8I GCNNGC 6 cut(s) 780, 1838, 1854, 2195, 2626, 2845
CaiI CAGNNNCTG 1 cut(s) 2471
CciI TCATGA 3 cut(s) 657, 957, 2182
Cfr13I GGNCC 4 cut(s) 1793, 2024, 3463, 3598
CseI GACGC 4 cut(s) 672, 834, 2403, 3599
Csp6I GTAC 8 cut(s) 119, 180, 830, 888, 1316, 2094, 2578, 2704
CviQI GTAC 8 cut(s) 119, 180, 830, 888, 1316, 2094, 2578, 2704
DpnI GATC 8 cut(s) 224, 374, 746, 1697, 1818, 2219, 3111, 3615
DpnII GATC 8 cut(s) 222, 372, 744, 1695, 1816, 2217, 3109, 3613
Eam1104I CTCTTC 3 cut(s) 2046, 2299, 2679
EarI CTCTTC 3 cut(s) 2046, 2299, 2679
Eco130I CCWWGG 2 cut(s) 897, 2280
Eco31I GGTCTC 1 cut(s) 3190
Eco47I GGWCC 3 cut(s) 1793, 3463, 3598
Eco57I CTGAAG 4 cut(s) 329, 1622, 1971, 2703
Eco81I CCTNAGG 1 cut(s) 1515
Eco88I CYCGRG 2 cut(s) 1609, 3016
EcoNI CCTNNNNNAGG 1 cut(s) 2547
EcoO109I RGGNCCY 1 cut(s) 2024
EcoRI GAATTC 1 cut(s) 1614
EcoRII CCWGG 6 cut(s) 1033, 1302, 1386, 2049, 2871, 3297
EcoT14I CCWWGG 2 cut(s) 897, 2280
ErhI CCWWGG 2 cut(s) 897, 2280
Esp3I CGTCTC 1 cut(s) 690
FaqI GGGAC 1 cut(s) 1578
FauI CCCGC 3 cut(s) 640, 2278, 2473
FauNDI CATATG 1 cut(s) 3343
FbaI TGATCA 2 cut(s) 372, 1695
FblI GTMKAC 1 cut(s) 726
FspBI CTAG 8 cut(s) 227, 1218, 1590, 1860, 2637, 3006, 3081, 3539
GsuI CTGGAG 2 cut(s) 399, 3471
HaeIII GGCC 2 cut(s) 1377, 2026
HapII CCGG 1 cut(s) 825
HgaI GACGC 4 cut(s) 672, 834, 2403, 3599
Hin1I GRCGYC 2 cut(s) 683, 845
HincII GTYRAC 1 cut(s) 1384
HindII GTYRAC 1 cut(s) 1384
HindIII AAGCTT 3 cut(s) 131, 406, 3657
HpaII CCGG 1 cut(s) 825
HphI GGTGA 8 cut(s) 19, 506, 1322, 1550, 3050, 3167, 3304, 3398
Hpy166II GTNNAC 7 cut(s) 692, 727, 830, 1384, 2338, 3425, 3479
Hpy8I GTNNAC 7 cut(s) 692, 727, 830, 1384, 2338, 3425, 3479
Hpy99I CGWCG 1 cut(s) 2049
HpyAV CCTTC 9 cut(s) 477, 1995, 2176, 2323, 2683, 3034, 3343, 3347, 3511
HpyCH4IV ACGT 2 cut(s) 2631, 3093
HpySE526I ACGT 2 cut(s) 2631, 3093
Hsp92I GRCGYC 2 cut(s) 683, 845
Ksp22I TGATCA 2 cut(s) 372, 1695
Kzo9I GATC 8 cut(s) 222, 372, 744, 1695, 1816, 2217, 3109, 3613
LmnI GCTCC 6 cut(s) 58, 713, 1036, 1775, 2927, 3301
LweI GCATC 9 cut(s) 10, 53, 767, 1016, 2398, 2590, 2611, 2632, 3553
MaeI CTAG 8 cut(s) 227, 1218, 1590, 1860, 2637, 3006, 3081, 3539
MaeII ACGT 2 cut(s) 2631, 3093
MaeIII GTNAC 5 cut(s) 1925, 2538, 2887, 3221, 3445
MalI GATC 8 cut(s) 224, 374, 746, 1697, 1818, 2219, 3111, 3615
MbiI CCGCTC 2 cut(s) 635, 1251
MboI GATC 8 cut(s) 222, 372, 744, 1695, 1816, 2217, 3109, 3613
MboII GAAGA 8 cut(s) 541, 1096, 1615, 1923, 2033, 2116, 2316, 2696
MfeI CAATTG 5 cut(s) 1779, 2475, 2664, 3141, 3467
MflI RGATCY 1 cut(s) 1816
MhlI GDGCHC 5 cut(s) 507, 1645, 1736, 2373, 3559
MlyI GAGTC 5 cut(s) 198, 290, 2316, 2996, 3699
MmeI TCCRAC 3 cut(s) 36, 1222, 2413
MroXI GAANNNNTTC 3 cut(s) 665, 2588, 2953
MslI CAYNNNNRTG 5 cut(s) 1012, 2376, 3435, 3626, 3771
MspA1I CMGCKG 2 cut(s) 1475, 2108
MspI CCGG 1 cut(s) 825
MspR9I CCNGG 6 cut(s) 1035, 1304, 1388, 2051, 2873, 3299
MunI CAATTG 5 cut(s) 1779, 2475, 2664, 3141, 3467
Mva1269I GAATGC 2 cut(s) 1750, 1798
MvaI CCWGG 6 cut(s) 1035, 1304, 1388, 2051, 2873, 3299
NdeI CATATG 1 cut(s) 3343
NdeII GATC 8 cut(s) 222, 372, 744, 1695, 1816, 2217, 3109, 3613
NlaIV GGNNCC 5 cut(s) 1392, 1818, 3303, 3464, 3522
NmuCI GTSAC 3 cut(s) 1925, 2887, 3221
NspI RCATGY 1 cut(s) 3770
OliI CACNNNNGTG 2 cut(s) 2376, 3626
PagI TCATGA 3 cut(s) 657, 957, 2182
PctI GAATGC 2 cut(s) 1750, 1798
PdmI GAANNNNTTC 3 cut(s) 665, 2588, 2953
PfeI GAWTC 5 cut(s) 149, 2438, 2589, 3193, 3569
PfoI TCCNGGA 1 cut(s) 1033
PleI GAGTC 5 cut(s) 198, 289, 2315, 2996, 3698
PpsI GAGTC 5 cut(s) 198, 289, 2315, 2996, 3698
Ppu21I YACGTR 1 cut(s) 2632
PshBI ATTAAT 2 cut(s) 1071, 1104
Psp6I CCWGG 6 cut(s) 1033, 1302, 1386, 2049, 2871, 3297
PspGI CCWGG 6 cut(s) 1033, 1302, 1386, 2049, 2871, 3297
PspN4I GGNNCC 5 cut(s) 1392, 1818, 3303, 3464, 3522
PspPI GGNCC 4 cut(s) 1793, 2024, 3463, 3598
PsrI GAACNNNNNNTAC 2 cut(s) 2517, 2549
PstI CTGCAG 3 cut(s) 346, 1474, 3391
PstNI CAGNNNCTG 1 cut(s) 2471
PsuI RGATCY 1 cut(s) 1816
PvuII CAGCTG 1 cut(s) 1475
RsaI GTAC 8 cut(s) 120, 181, 831, 889, 1317, 2095, 2579, 2705
RsaNI GTAC 8 cut(s) 119, 180, 830, 888, 1316, 2094, 2578, 2704
RseI CAYNNNNRTG 5 cut(s) 1012, 2376, 3435, 3626, 3771
Sau3AI GATC 8 cut(s) 222, 372, 744, 1695, 1816, 2217, 3109, 3613
Sau96I GGNCC 4 cut(s) 1793, 2024, 3463, 3598
ScaI AGTACT 1 cut(s) 1317
SchI GAGTC 5 cut(s) 198, 290, 2316, 2996, 3699
ScrFI CCNGG 6 cut(s) 1035, 1304, 1388, 2051, 2873, 3299
SduI GDGCHC 5 cut(s) 507, 1645, 1736, 2373, 3559
SfaNI GCATC 9 cut(s) 10, 53, 767, 1016, 2398, 2590, 2611, 2632, 3553
SfcI CTRYAG 8 cut(s) 288, 342, 1470, 1584, 2097, 2403, 3257, 3387
SinI GGWCC 3 cut(s) 1793, 3463, 3598
SmiMI CAYNNNNRTG 5 cut(s) 1012, 2376, 3435, 3626, 3771
SmlI CTYRAG 2 cut(s) 1729, 2374
SmoI CTYRAG 2 cut(s) 1729, 2374
SpeI ACTAGT 1 cut(s) 1859
SspI AATATT 3 cut(s) 426, 1426, 2970
SspMI CTAG 8 cut(s) 227, 1218, 1590, 1860, 2637, 3006, 3081, 3539
StyD4I CCNGG 6 cut(s) 1033, 1302, 1386, 2049, 2871, 3297
StyI CCWWGG 2 cut(s) 897, 2280
TaiI ACGT 2 cut(s) 2634, 3096
TaqI TCGA 2 cut(s) 743, 3616
TaqII GACCGA 1 cut(s) 3615
TatI WGTACW 5 cut(s) 829, 887, 1315, 2577, 2703
TauI GCSGC 1 cut(s) 1046
TfiI GAWTC 5 cut(s) 149, 2438, 2589, 3193, 3569
TseFI GTSAC 3 cut(s) 1925, 2887, 3221
Tsp45I GTSAC 3 cut(s) 1925, 2887, 3221
TspGWI ACGGA 1 cut(s) 170
VpaK11BI GGWCC 3 cut(s) 1793, 3463, 3598
VspI ATTAAT 2 cut(s) 1071, 1104
XagI CCTNNNNNAGG 1 cut(s) 2547
XapI RAATTY 5 cut(s) 1496, 1614, 2204, 3053, 3099
XceI RCATGY 1 cut(s) 3770
XcmI CCANNNNNNNNNTGG 1 cut(s) 3473
XmiI GTMKAC 1 cut(s) 726
XmnI GAANNNNTTC 3 cut(s) 665, 2588, 2953
XspI CTAG 8 cut(s) 227, 1218, 1590, 1860, 2637, 3006, 3081, 3539
ZrmI AGTACT 1 cut(s) 1317
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.