Rmu_sc0010010.1_g000005

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010010.1
Physical Location & Seq
Reverse (-)
24725 .. 30218
5494 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010010.1_g000005.1.cds

Sequence Viewer

Length: 3729 bp
atgggtgatcaggagaatcctttggatggagatcatgtgatcagagaggaagctgccgcgtcgaaaagtcaatcagcagtgccggaatcccagaacggaccggaaaatactagtaacaaggaagatgcaagcaagagcaaggagggtggcaccaaggcagtaccctttttcaagcttttctcatttgctgattccatggattacttgttaatgtcggttgagatgtcttgttggatgatcaccggagagagacaggctgcgagaataagatttttatacttgaaaacaatattgaggcaagacgtaggcttttttgataaagaaactagcactggagaagttattgggaggatgtcaggtgatactgtgctcattcaggaggccatgggagagaaggtaggaacttgtatccagttatttgcaacattctttggaggctttatcatagcctttgttaagggatggcttcttaccctggtcatgctttcttctatccccgctcttgtcatctctggtgctgtcatgagcatcatcgtatcaaagttggcatctcgaggacaagctgcttattcagcagcagcatctgtggttgagcagacaattggttcaataagaactgttgcatcatttacaggggagaaacaagctataactaagtacaacagctctataaataaagcttacaagtctggtgtgcaagagggtttggcatctgggttgggtatcggttcagttatgcttattatattctgtagttatgctttggctatatggtatggcggaaaaatgatacttgaaaagggatataaaggaggagatgtcataaatgtagtttttgctgtgttgactggctccttctctcttgggcagacatctccatgcttggccgcatttgcttctgggaaagctgcagcttataagatgtttgagacgattagcagaaacccagagatagatgcttctgatactaaagggaagcaattacaagatattagaggagacatagaactgagggatgttcattttagttatcctgcaagaccagatgaacatatattccgtggattttctctcacaatacctagtggtgcaactgctgctttggtaggagagagcggaagtggtaaatcgactgtaatcagtttgattgagagattttatgacccacaggccggtgaagttcttattgacggtgtcaatctcaaagagttccagctgaaatggatcaggcagaaaataggtcttgtcagccaggaacctgtattgtttacttgcagcattagagataatattggctatgggaaggatggtgcaactactgaagagataagggctgctgctgagcttgccaatgctgctaaattcatagacaaacttcctcagggactagatacaatggtgggtgagcatggaactcaactatctgggggccaaaagcagagagttgctatagctcgagcaattctaaaaaacccaagaattctacttctagatgaagccacaagtgctcttgacgcagaatctgagagagttgtgcaggaggcactggatagaattatggttaaccggactactgtcatagtagcccatcgcttgagcacagtaaggaatgctgataccattgctgtcatacatcgaggaacaattgttgaacaaggaccacattccgagctagttaaggatcctgagggagcatatagccagcttataagactacaagaaaccagaactgtgtcagaacagactggtgtaaatgatcaggataggccagatatttcttccgattctcggagacggtcaagtcaaagattttctttattaagatccataagccgtggatcatctggaagagcaaatagtattcgtcattcattctcaatctcatttggtggtgcacctgctgcaatcggcatccttgaaacaaatcctgctgaacctgatactcatgctccagcatcatcaaaagggcatccagaagtctcacttagccgcctagctgccctgaacaagcctgagatcccagtgctgcttcttggtactttagctgcagcagccagtggggcgatcttacctgtttttgggatactaatatccagtgtaatcaagaccttctttgagccacctgatcaactgagtaaggattcaaagttttgggcattaatctttgttgttcttggagttgcatcgttcttggcacaatcatcaagagcatatctttttggtgtggctggatgtaagttgataagaagagttcgatcaaagtgctttgagaaggtggtttacatggacataggttggtttgatgagtctgatcattcaagtggtgcaattggggcaaggctttctacagatgcggcttctctaagagggttggttggagatgctctaggtttgttggttcagaatatagcaactgcagttgccggcctagttattgctttcgtagcaaattggcaattggctcttataattcttgtcctgctgcctctgttaggattaagtggatattttcaagtcaagttaatgaaagggttcagtgcagatgcaaagaaaatgtacgaggacgcaagccaagtagccaatgatgctgttgggagtattagaacaattgcttccttttgtgctgaagagaaggtgatggaactgtaccaggaaaaatgtgaaggtcctattaaaagtgggataagacaaggcttagttagcggaattggttttgggctatcgttctttttgctattttctgtgtatgcctgcagtttctatgctggagcccgacttgttgcagcaggcaagacagaattttctgacgtgtttcgggttttctttgctctcactatgacagctgttggaatatctcagtcgagctccctagcccctgatataagtaaaggaaagagttctgcttcttccatatttgcaattcttgacggcaagtcaaaaatagactctagtgacgactctggaactacaatagaaaatgtgaagggagatattgaactacgccatgtcagtttcaagtatccaactagacccaacgtgccaatctttcaggatctttgcttgaccattcatcatggcaagactgttgctctggttggagaaagtggtagtgggaagtcgacagtgatctcattgttgcagagattttatgaccctgattcaggtcacattacattagatggaatcgaaatccaaaagctacaactgaagtggttgagacagcaaatggggctggtgagccaagagcctctgctatttaatgacactatccgagccaacattggatatggaaaggatgggaatgcaaccgaagctgaaattatagctgcagcagaattggcaaatgcccacaagttcattagtagcttacaacagggttacgatacagtagtaggagaacggggagtccaattgtcaggtggacagaagcaaagggtggcaattgcacgagctattatgaaggcgccaaagatattactcctagatgaggctaccagtgctcttgatgctgaatccgaacgagtcgttcaagatgcattggacagagttatggtggatcgaacaacagtggtagttgcccatcggttgtcgacaatcagaagtgcagagttgatagcagtggtaaagaatggagtcattgcagagaaaggaaagcatgagactttgatcaatatcaaggatggcacttacgcttctctggtagctttacatgcaagtgcctcatcttag

Protein Analysis

1242

Amino Acids

133.33

Weight (kDa)

6.86

Isoelectric Point (pI)

39.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 918, 1709, 2468
AarI CACCTGC 1 cut(s) 1906
AasI GACNNNNNNGTC 1 cut(s) 1800
Acc36I ACCTGC 1 cut(s) 1906
AccB1I GGYRCC 2 cut(s) 149, 3463
AccBSI CCGCTC 2 cut(s) 500, 1116
AccI GTMKAC 2 cut(s) 3119, 3590
AccII CGCG 1 cut(s) 59
AciI CCGC 8 cut(s) 57, 498, 780, 888, 1116, 1990, 2354, 2703
AclWI GGATC 8 cut(s) 1232, 1676, 1689, 1818, 1846, 2011, 3060, 3564
AcoI YGGCCR 1 cut(s) 885
AcsI RAATTY 3 cut(s) 1361, 1479, 2798
AcuI CTGAAG 3 cut(s) 1341, 2646, 3227
AcyI GRCGYC 1 cut(s) 3464
AfaI GTAC 5 cut(s) 162, 659, 2038, 2558, 2648
AfiI CCNNNNNNNGG 7 cut(s) 26, 1172, 1788, 2078, 2492, 3161, 3487
AflIII ACRYGT 1 cut(s) 2808
AhdI GACNNNNNGTC 1 cut(s) 2932
AhlI ACTAGT 1 cut(s) 110
AjiI CACGTC 1 cut(s) 2809
AjnI CCWGG 3 cut(s) 474, 1251, 2649
AloI GAACNNNNNNTCC 4 cut(s) 1041, 1073, 3390, 3422
Alw21I GWGCWC 6 cut(s) 372, 1510, 1601, 1897, 2867, 3502
Alw26I GTCTC 7 cut(s) 244, 923, 993, 1786, 1984, 3211, 3653
Alw44I GTGCAC 1 cut(s) 1893
AlwI GGATC 8 cut(s) 1232, 1676, 1689, 1818, 1846, 2011, 3060, 3564
AlwNI CAGNNNCTG 2 cut(s) 584, 1523
Ama87I CYCGRG 2 cut(s) 552, 1455
AoxI GGCC 6 cut(s) 381, 885, 1170, 1429, 1766, 2425
ApaLI GTGCAC 1 cut(s) 1893
ApoI RAATTY 3 cut(s) 1361, 1479, 2798
AseI ATTAAT 1 cut(s) 2159
Asp700I GAANNNNTTC 2 cut(s) 2531, 2896
AspLEI GCGC 1 cut(s) 3466
AspS9I GGNCC 4 cut(s) 98, 1429, 1658, 2666
AsuHPI GGTGA 7 cut(s) 17, 232, 371, 1187, 1415, 2647, 3247
AvaI CYCGRG 2 cut(s) 552, 1455
AvaII GGWCC 3 cut(s) 98, 1658, 2666
AxyI CCTNAGG 2 cut(s) 1380, 1686
BaeGI GKGCMC 1 cut(s) 1897
BaeI ACNNNNGTAYC 4 cut(s) 1383, 1416, 3375, 3408
BamHI GGATCC 1 cut(s) 1681
BanI GGYRCC 2 cut(s) 149, 3463
BanII GRGCYC 2 cut(s) 2773, 2867
BarI GAAGNNNNNNTAC 2 cut(s) 2264, 2296
BauI CACGAG 1 cut(s) 3447
Bbv12I GWGCWC 6 cut(s) 372, 1510, 1601, 1897, 2867, 3502
BccI CCATC 9 cut(s) 20, 456, 1301, 1596, 2632, 3173, 3290, 3588, 3674
BceAI ACGGC 2 cut(s) 1818, 2944
BcgI CGANNNNNNTGC 2 cut(s) 2244, 2278
BciT130I CCWGG 3 cut(s) 476, 1253, 2651
BciVI GTATCC 3 cut(s) 419, 2076, 3030
BclI TGATCA 7 cut(s) 7, 39, 237, 1756, 2125, 2311, 3666
BcoDI GTCTC 7 cut(s) 244, 923, 993, 1786, 1984, 3211, 3653
BcuI ACTAGT 1 cut(s) 110
BfmI CTRYAG 8 cut(s) 751, 909, 1449, 2046, 2346, 2415, 2752, 3327
BfoI RGCGCY 1 cut(s) 3467
BfuAI ACCTGC 1 cut(s) 1906
BfuI GTATCC 3 cut(s) 419, 2076, 3030
BglI GCCNNNNNGGC 1 cut(s) 2060
BlpI GCTNAGC 1 cut(s) 1341
Bme1390I CCNGG 3 cut(s) 476, 1253, 2651
Bme18I GGWCC 3 cut(s) 98, 1658, 2666
BmeRI GACNNNNNGTC 1 cut(s) 2932
BmeT110I CYCGRG 2 cut(s) 552, 1455
BmgBI CACGTC 1 cut(s) 2809
BmgT120I GGNCC 4 cut(s) 98, 1429, 1658, 2666
BmiI GGNNCC 7 cut(s) 151, 853, 1257, 1430, 1683, 2770, 3465
BmrFI CCNGG 3 cut(s) 476, 1253, 2651
BmrI ACTGGG 1 cut(s) 2015
BmuI ACTGGG 1 cut(s) 2015
BoxI GACNNNNGTC 1 cut(s) 1574
BpmI CTGGAG 3 cut(s) 354, 1935, 2787
Bpu1102I GCTNAGC 1 cut(s) 1341
BpuEI CTTGAG 1 cut(s) 1615
BsaBI GATNNNNATC 2 cut(s) 30, 3671
BsaHI GRCGYC 1 cut(s) 3464
BsaJI CCNNGG 6 cut(s) 153, 195, 384, 474, 1060, 1834
BsaWI WCCGGW 3 cut(s) 100, 242, 1566
BsaXI ACNNNNNCTCC 8 cut(s) 21, 51, 381, 411, 804, 834, 1933, 1963
Bsc4I CCNNNNNNNGG 7 cut(s) 26, 1172, 1788, 2078, 2492, 3161, 3487
Bse118I RCCGGY 2 cut(s) 1172, 2423
Bse1I ACTGG 9 cut(s) 337, 412, 853, 1551, 1750, 2021, 2055, 2094, 3495
Bse21I CCTNAGG 2 cut(s) 1380, 1686
Bse3DI GCAATG 2 cut(s) 1620, 3636
Bse8I GATNNNNATC 2 cut(s) 30, 3671
BseBI CCWGG 3 cut(s) 476, 1253, 2651
BseDI CCNNGG 6 cut(s) 153, 195, 384, 474, 1060, 1834
BseJI GATNNNNATC 2 cut(s) 30, 3671
BseLI CCNNNNNNNGG 7 cut(s) 26, 1172, 1788, 2078, 2492, 3161, 3487
BseMI GCAATG 2 cut(s) 1620, 3636
BseMII CTCAG 8 cut(s) 1001, 1332, 1394, 1515, 1677, 2004, 2123, 2870
BseNI ACTGG 9 cut(s) 337, 412, 853, 1551, 1750, 2021, 2055, 2094, 3495
BseRI GAGGAG 2 cut(s) 828, 1011
BseSI GKGCMC 1 cut(s) 1897
BsgI GTGCAG 3 cut(s) 1556, 2559, 3624
Bsh1236I CGCG 1 cut(s) 59
BshFI GGCC 6 cut(s) 383, 887, 1172, 1431, 1768, 2427
BshNI GGYRCC 2 cut(s) 149, 3463
BsiHKAI GWGCWC 6 cut(s) 372, 1510, 1601, 1897, 2867, 3502
BsiHKCI CYCGRG 2 cut(s) 552, 1455
BsiSI CCGG 6 cut(s) 83, 101, 243, 1173, 1567, 2424
BslFI GGGAC 1 cut(s) 1398
BslI CCNNNNNNNGG 7 cut(s) 26, 1172, 1788, 2078, 2492, 3161, 3487
BsmAI GTCTC 7 cut(s) 244, 923, 993, 1786, 1984, 3211, 3653
BsmBI CGTCTC 2 cut(s) 923, 1786
BsmFI GGGAC 1 cut(s) 1398
BsmI GAATGC 2 cut(s) 1615, 3307
BsnI GGCC 6 cut(s) 383, 887, 1172, 1431, 1768, 2427
BsoBI CYCGRG 2 cut(s) 552, 1455
Bsp1286I GDGCHC 7 cut(s) 372, 1510, 1601, 1897, 2773, 2867, 3502
Bsp1720I GCTNAGC 1 cut(s) 1341
Bsp19I CCATGG 2 cut(s) 195, 384
BspACI CCGC 8 cut(s) 57, 498, 780, 888, 1116, 1990, 2354, 2703
BspANI GGCC 6 cut(s) 383, 887, 1172, 1431, 1768, 2427
BspCNI CTCAG 8 cut(s) 1002, 1333, 1393, 1516, 1678, 2005, 2124, 2869
BspFNI CGCG 1 cut(s) 59
BspHI TCATGA 1 cut(s) 522
BspLI GGNNCC 7 cut(s) 151, 853, 1257, 1430, 1683, 2770, 3465
BspMAI CTGCAG 5 cut(s) 913, 2050, 2419, 2756, 3331
BspMI ACCTGC 1 cut(s) 1906
BspPI GGATC 8 cut(s) 1232, 1676, 1689, 1818, 1846, 2011, 3060, 3564
BspQI GCTCTTC 1 cut(s) 1843
BspT107I GGYRCC 2 cut(s) 149, 3463
BsrBI CCGCTC 2 cut(s) 500, 1116
BsrDI GCAATG 2 cut(s) 1620, 3636
BsrFI RCCGGY 2 cut(s) 1172, 2423
BsrI ACTGG 9 cut(s) 337, 412, 853, 1551, 1750, 2021, 2055, 2094, 3495
BssAI RCCGGY 2 cut(s) 1172, 2423
BssECI CCNNGG 6 cut(s) 153, 195, 384, 474, 1060, 1834
BssNI GRCGYC 1 cut(s) 3464
BssSI CACGAG 1 cut(s) 3447
BssT1I CCWWGG 3 cut(s) 153, 195, 384
Bst2BI CACGAG 1 cut(s) 3447
Bst2UI CCWGG 3 cut(s) 476, 1253, 2651
Bst6I CTCTTC 4 cut(s) 1317, 1843, 2242, 2622
BstACI GRCGYC 1 cut(s) 3464
BstAPI GCANNNNNTGC 2 cut(s) 1097, 1901
BstC8I GCNNGC 7 cut(s) 130, 1347, 1703, 2425, 2569, 2752, 2788
BstDSI CCRYGG 4 cut(s) 195, 384, 1060, 1834
BstENI CCTNNNNNAGG 3 cut(s) 2490, 3159, 3485
BstFNI CGCG 1 cut(s) 59
BstH2I RGCGCY 1 cut(s) 3467
BstHHI GCGC 1 cut(s) 3466
BstMAI GTCTC 7 cut(s) 244, 923, 993, 1786, 1984, 3211, 3653
BstNI CCWGG 3 cut(s) 476, 1253, 2651
BstNSI RCATGY 1 cut(s) 3713
BstPAI GACNNNNGTC 1 cut(s) 1574
BstSCI CCNGG 3 cut(s) 474, 1251, 2649
BstSFI CTRYAG 8 cut(s) 751, 909, 1449, 2046, 2346, 2415, 2752, 3327
BstSLI GKGCMC 1 cut(s) 1897
BstUI CGCG 1 cut(s) 59
BstX2I RGATCY 4 cut(s) 1681, 1823, 2016, 3052
BstYI RGATCY 4 cut(s) 1681, 1823, 2016, 3052
Bsu36I CCTNAGG 2 cut(s) 1380, 1686
BsuI GTATCC 3 cut(s) 419, 2076, 3030
BsuRI GGCC 6 cut(s) 383, 887, 1172, 1431, 1768, 2427
BtgI CCRYGG 4 cut(s) 195, 384, 1060, 1834
BtgZI GCGATG 1 cut(s) 1574
BtrI CACGTC 1 cut(s) 2809
BtsI GCAGTG 2 cut(s) 84, 3624
BveI ACCTGC 1 cut(s) 1906
Cac8I GCNNGC 7 cut(s) 130, 1347, 1703, 2425, 2569, 2752, 2788
CaiI CAGNNNCTG 2 cut(s) 584, 1523
CciI TCATGA 1 cut(s) 522
CfoI GCGC 1 cut(s) 3466
Cfr10I RCCGGY 2 cut(s) 1172, 2423
Cfr13I GGNCC 4 cut(s) 98, 1429, 1658, 2666
CpoI CGGWCCG 1 cut(s) 98
CseI GACGC 3 cut(s) 48, 1523, 2573
Csp6I GTAC 5 cut(s) 161, 658, 2037, 2557, 2647
CspCI CAANNNNNGTGG 4 cut(s) 127, 162, 3191, 3226
CspI CGGWCCG 1 cut(s) 98
CviQI GTAC 5 cut(s) 161, 658, 2037, 2557, 2647
DinI GGCGCC 1 cut(s) 3465
DrdI GACNNNNNNGTC 1 cut(s) 1800
DriI GACNNNNNGTC 1 cut(s) 2932
DseDI GACNNNNNNGTC 1 cut(s) 1800
EaeI YGGCCR 1 cut(s) 885
Eam1104I CTCTTC 4 cut(s) 1317, 1843, 2242, 2622
Eam1105I GACNNNNNGTC 1 cut(s) 2932
EarI CTCTTC 4 cut(s) 1317, 1843, 2242, 2622
EciI GGCGGA 1 cut(s) 795
Ecl136II GAGCTC 1 cut(s) 2865
Eco130I CCWWGG 3 cut(s) 153, 195, 384
Eco24I GRGCYC 2 cut(s) 2773, 2867
Eco47I GGWCC 3 cut(s) 98, 1658, 2666
Eco53kI GAGCTC 1 cut(s) 2865
Eco57I CTGAAG 3 cut(s) 1341, 2646, 3227
Eco81I CCTNAGG 2 cut(s) 1380, 1686
Eco88I CYCGRG 2 cut(s) 552, 1455
EcoICRI GAGCTC 1 cut(s) 2865
EcoNI CCTNNNNNAGG 3 cut(s) 2490, 3159, 3485
EcoO109I RGGNCCY 1 cut(s) 2666
EcoRI GAATTC 1 cut(s) 1479
EcoRII CCWGG 3 cut(s) 474, 1251, 2649
EcoT14I CCWWGG 3 cut(s) 153, 195, 384
EcoT22I ATGCAT 1 cut(s) 3538
EcoT38I GRGCYC 2 cut(s) 2773, 2867
EgeI GGCGCC 1 cut(s) 3465
EheI GGCGCC 1 cut(s) 3465
ErhI CCWWGG 3 cut(s) 153, 195, 384
Esp3I CGTCTC 2 cut(s) 923, 1786
FalI AAGNNNNNCTT 6 cut(s) 1798, 1830, 1968, 2000, 2096, 2128
FaqI GGGAC 1 cut(s) 1398
FauI CCCGC 1 cut(s) 505
FbaI TGATCA 7 cut(s) 7, 39, 237, 1756, 2125, 2311, 3666
FblI GTMKAC 2 cut(s) 3119, 3590
FriOI GRGCYC 2 cut(s) 2773, 2867
GlaI GCGC 1 cut(s) 3465
GsuI CTGGAG 3 cut(s) 354, 1935, 2787
HaeII RGCGCY 1 cut(s) 3467
HaeIII GGCC 6 cut(s) 383, 887, 1172, 1431, 1768, 2427
HapII CCGG 6 cut(s) 83, 101, 243, 1173, 1567, 2424
HgaI GACGC 3 cut(s) 48, 1523, 2573
HhaI GCGC 1 cut(s) 3466
Hin1I GRCGYC 1 cut(s) 3464
Hin6I GCGC 1 cut(s) 3464
HinP1I GCGC 1 cut(s) 3464
HincII GTYRAC 4 cut(s) 846, 1564, 3120, 3591
HindII GTYRAC 4 cut(s) 846, 1564, 3120, 3591
HindIII AAGCTT 2 cut(s) 173, 678
HpaI GTTAAC 1 cut(s) 1564
HpaII CCGG 6 cut(s) 83, 101, 243, 1173, 1567, 2424
HphI GGTGA 7 cut(s) 17, 232, 371, 1187, 1415, 2647, 3247
Hpy166II GTNNAC 8 cut(s) 846, 1269, 1564, 1895, 2281, 3120, 3422, 3591
Hpy8I GTNNAC 8 cut(s) 846, 1269, 1564, 1895, 2281, 3120, 3422, 3591
Hpy99I CGWCG 1 cut(s) 64
HpyAV CCTTC 9 cut(s) 388, 865, 1297, 2119, 2266, 2626, 2657, 2977, 3454
HpyCH4IV ACGT 3 cut(s) 303, 2808, 3036
HpySE526I ACGT 3 cut(s) 303, 2808, 3036
Hsp92I GRCGYC 1 cut(s) 3464
HspAI GCGC 1 cut(s) 3464
KasI GGCGCC 1 cut(s) 3463
KroI GCCGGC 1 cut(s) 2423
KroNI GCCGGC 1 cut(s) 2425
Ksp22I TGATCA 7 cut(s) 7, 39, 237, 1756, 2125, 2311, 3666
KspAI GTTAAC 1 cut(s) 1564
LguI GCTCTTC 1 cut(s) 1843
LmnI GCTCC 5 cut(s) 857, 1691, 1954, 2768, 2870
MaeII ACGT 3 cut(s) 303, 2808, 3036
MaeIII GTNAC 4 cut(s) 113, 2951, 3164, 3377
MbiI CCGCTC 2 cut(s) 500, 1116
MboII GAAGA 8 cut(s) 134, 480, 1334, 1770, 1860, 2259, 2639, 2898
MfeI CAATTG 7 cut(s) 600, 1644, 2328, 2456, 2607, 3410, 3441
MflI RGATCY 4 cut(s) 1681, 1823, 2016, 3052
MhlI GDGCHC 7 cut(s) 372, 1510, 1601, 1897, 2773, 2867, 3502
Mly113I GGCGCC 1 cut(s) 3464
MlyI GAGTC 6 cut(s) 2315, 2939, 2951, 3414, 3531, 3642
MmeI TCCRAC 5 cut(s) 212, 2356, 2827, 3047, 3076
Mph1103I ATGCAT 1 cut(s) 3538
MroNI GCCGGC 1 cut(s) 2423
MroXI GAANNNNTTC 2 cut(s) 2531, 2896
MslI CAYNNNNRTG 3 cut(s) 877, 2319, 3714
MspA1I CMGCKG 2 cut(s) 1216, 2843
MspI CCGG 6 cut(s) 83, 101, 243, 1173, 1567, 2424
MspR9I CCNGG 3 cut(s) 476, 1253, 2651
MunI CAATTG 7 cut(s) 600, 1644, 2328, 2456, 2607, 3410, 3441
Mva1269I GAATGC 2 cut(s) 1615, 3307
MvaI CCWGG 3 cut(s) 476, 1253, 2651
MvnI CGCG 1 cut(s) 59
NaeI GCCGGC 1 cut(s) 2425
NarI GGCGCC 1 cut(s) 3464
NcoI CCATGG 2 cut(s) 195, 384
NgoMIV GCCGGC 1 cut(s) 2423
NlaIV GGNNCC 7 cut(s) 151, 853, 1257, 1430, 1683, 2770, 3465
NmuCI GTSAC 2 cut(s) 2951, 3164
NsiI ATGCAT 1 cut(s) 3538
NspI RCATGY 1 cut(s) 3713
PaeR7I CTCGAG 2 cut(s) 552, 1455
PagI TCATGA 1 cut(s) 522
PaqCI CACCTGC 1 cut(s) 1906
PciSI GCTCTTC 1 cut(s) 1843
PctI GAATGC 2 cut(s) 1615, 3307
PdiI GCCGGC 1 cut(s) 2425
PdmI GAANNNNTTC 2 cut(s) 2531, 2896
PfeI GAWTC 9 cut(s) 16, 86, 191, 1520, 1784, 2141, 3158, 3183, 3512
PflFI GACNNNGTC 1 cut(s) 1193
PleI GAGTC 6 cut(s) 2314, 2939, 2951, 3413, 3530, 3641
PluTI GGCGCC 1 cut(s) 3467
PpsI GAGTC 6 cut(s) 2314, 2939, 2951, 3413, 3530, 3641
PpuMI RGGWCCY 1 cut(s) 2666
PshAI GACNNNNGTC 1 cut(s) 1574
PshBI ATTAAT 1 cut(s) 2159
PsiI TTATAA 3 cut(s) 918, 1709, 2468
Psp124BI GAGCTC 1 cut(s) 2867
Psp5II RGGWCCY 1 cut(s) 2666
Psp6I CCWGG 3 cut(s) 474, 1251, 2649
PspGI CCWGG 3 cut(s) 474, 1251, 2649
PspN4I GGNNCC 7 cut(s) 151, 853, 1257, 1430, 1683, 2770, 3465
PspPI GGNCC 4 cut(s) 98, 1429, 1658, 2666
PspPPI RGGWCCY 1 cut(s) 2666
PspXI VCTCGAGB 1 cut(s) 1455
PstI CTGCAG 5 cut(s) 913, 2050, 2419, 2756, 3331
PstNI CAGNNNCTG 2 cut(s) 584, 1523
PsuI RGATCY 4 cut(s) 1681, 1823, 2016, 3052
PsyI GACNNNGTC 1 cut(s) 1193
PvuII CAGCTG 2 cut(s) 1216, 2843
RsaI GTAC 5 cut(s) 162, 659, 2038, 2558, 2648
RsaNI GTAC 5 cut(s) 161, 658, 2037, 2557, 2647
RseI CAYNNNNRTG 3 cut(s) 877, 2319, 3714
Rsr2I CGGWCCG 1 cut(s) 98
RsrII CGGWCCG 1 cut(s) 98
SacI GAGCTC 1 cut(s) 2867
SalI GTCGAC 2 cut(s) 3118, 3589
SapI GCTCTTC 1 cut(s) 1843
Sau96I GGNCC 4 cut(s) 98, 1429, 1658, 2666
SchI GAGTC 6 cut(s) 2315, 2939, 2951, 3414, 3531, 3642
ScrFI CCNGG 3 cut(s) 476, 1253, 2651
SduI GDGCHC 7 cut(s) 372, 1510, 1601, 1897, 2773, 2867, 3502
SfcI CTRYAG 8 cut(s) 751, 909, 1449, 2046, 2346, 2415, 2752, 3327
SfoI GGCGCC 1 cut(s) 3465
Sfr274I CTCGAG 2 cut(s) 552, 1455
SinI GGWCC 3 cut(s) 98, 1658, 2666
SlaI CTCGAG 2 cut(s) 552, 1455
SmiMI CAYNNNNRTG 3 cut(s) 877, 2319, 3714
SmlI CTYRAG 3 cut(s) 552, 1455, 1594
SmoI CTYRAG 3 cut(s) 552, 1455, 1594
SpeI ACTAGT 1 cut(s) 110
SsiI CCGC 8 cut(s) 57, 498, 780, 888, 1116, 1990, 2354, 2703
SspDI GGCGCC 1 cut(s) 3463
SspI AATATT 2 cut(s) 291, 1291
SstI GAGCTC 1 cut(s) 2867
StyD4I CCNGG 3 cut(s) 474, 1251, 2649
StyI CCWWGG 3 cut(s) 153, 195, 384
TaiI ACGT 3 cut(s) 306, 2811, 3039
TatI WGTACW 1 cut(s) 657
TauI GCSGC 4 cut(s) 59, 890, 1992, 2357
TfiI GAWTC 9 cut(s) 16, 86, 191, 1520, 1784, 2141, 3158, 3183, 3512
TseFI GTSAC 2 cut(s) 2951, 3164
Tsp45I GTSAC 2 cut(s) 2951, 3164
TspDTI ATGAA 9 cut(s) 1010, 1062, 1354, 1509, 1860, 2540, 3059, 3346, 3473
TspGWI ACGGA 2 cut(s) 111, 1049
Tth111I GACNNNGTC 1 cut(s) 1193
VneI GTGCAC 1 cut(s) 1893
VpaK11BI GGWCC 3 cut(s) 98, 1658, 2666
VspI ATTAAT 1 cut(s) 2159
XagI CCTNNNNNAGG 3 cut(s) 2490, 3159, 3485
XapI RAATTY 3 cut(s) 1361, 1479, 2798
XbaI TCTAGA 1 cut(s) 1489
XceI RCATGY 1 cut(s) 3713
XcmI CCANNNNNNNNNTGG 1 cut(s) 3416
XhoI CTCGAG 2 cut(s) 552, 1455
XmiI GTMKAC 2 cut(s) 3119, 3590
XmnI GAANNNNTTC 2 cut(s) 2531, 2896
Zsp2I ATGCAT 1 cut(s) 3538
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.