Prupe.1G104400_v2.0.a1

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
8409270 .. 8415996
6727 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G104400.1

Sequence Viewer

Length: 3882 bp
ATGGCTGAGGAAAATCCTGCGGATGGAAATGTAATCAAAGAGCAGGGAACGGCAGCATCGAACGGCCACTCAGCAGTAGTGGAGGACTCCCAAAACAGCCCACAAGATACAAGCAAGAGCAAGGAGGATGGCACCAAAACAGTACCATATTACAAGCTTTTCTCCTTTGCTGATTCCTTGGATTTCCTGTTAATGTCCGTTGGTACAATCAGTGCTATTGGAAATGGGACCTCTTTGCCTCTAATGACCATAATCTTTGGAGATGTGATTAACTCCTTTGGACAAAGTGGGAATAATAAAGACGTGGTTGATGCAGTTTCCAAGGTGGCTCTAAAGTTTGTCTACTTGGCGGTGGGAGCTGCTGCAGCGGCATTTCTACAGATGTCTTGCTGGATGGTCACTGGAGAGAGACAGGCTTCTCGAATAAGAAGTTTATACTTGAAAACAATATTGAGGCAAGATGTTGGCTTTTTTGATAAAGAAATTAACACTGGGGAAATTGTTGGGAGGATGTCAGGTGATACTGTGCTCATTCAAGAGGCCATGGGCGAGAAGGTAGGAAGTTTTATCCAGTTAATTGCAACATTCGTAGGAGGCTTTGTTATAGCATTTATTAAGGGATGGCTTCTCACCCTTGTCATGCTATCTTCTATCCCCCTTCTTGTCCTCTCTGGTGCCATCATGGGCATCCTTATATCAAAGATGGCATCCAGTGGACAAACTGCTTATTCAGTGGCGGCAACTGTGGTAGAGCAGACAATTGGTTCAATCAGAACAGTTGCATCGTTTACAGGAGAAAAGCAAGCTATAGCTAATTACAACAACTCCTTAATTAAAGCTTACAACTCTGGTGTGCAAGAGGGTTTGGCATCTGGGTTCGGAATTGGTTCGGTTATGCTGATTATAATGTGTAGTTATGCTCTGGCTATATGGTTTGGAGGAAAGATGATACTTGAAAAAGGATATACAGGAGGGGAAGTCATCAATGTAGTTTTCGCTGTGTTGACTGGCTCCATGTCTCTTGGGCAGGCATCTCCATGCTTGAGTGCATTTTCTGCTGGACAAGCTGCAGCTTATAAGATGTTTGAGACAATTGACAGAAAGCCAGAGATTGATGCTTCTGACACTAATGGGCAACAATTGCATGATATCCGTGGAGACATAGAACTAAGGGATGTTCATTTTAGTTATCCTGCAAGACCGGATGAACAAATATTCCATGGATTTTCTCTCTCAATACCTAGTGGTGCAACTGCTGCTTTGGTTGGAGAGAGTGGAAGTGGTAAATCAACTGTAATCAGTTTGATTGAGAGATTTTATGACCCCCTAGCTGGCGAAGTTCTTATTGATGGCATTAATCTCAAAGAGTTCCAACTGAAATGGATCAGACAGAAAATAGGCCTTGTCAGCCAGGAACCCGTTTTATTTACTTGTAGCATTAAAGATAATATTGCCTATGGAAAGGATGGTGCAACCACTGAAGAAATAAGGGCTGCTGCTGAACTTGCCAATGCTGCTAAATTCATAGACAAACTGCCTCAGGGACTGGACACAATGGTTGGTGAGCATGGAACTCAGCTATCTGGGGGCCAAAAGCAGAGAGTTGCTATAGCTAGAGCAATTCTCAAAGACCCAAGAATTCTACTTTTAGATGAAGCCACGAGTGCTCTTGATGCAGAATCTGAGAGAATTGTGCAGGAGGCACTGGACAGAATTATGATCAACCGGACTACTGTCGTTGTAGCCCACCGCTTGAGCACAGTAAGGAATGCTGACACGATTGCTGTTATACATCGAGGAACAATTGTTGAAAAAGGTCCACATTCTGAGCTAATTAAGGACCCTGAAGGAGCTTATAGCCAGCTTATAAGGTTGCAAGAAATGAGCAGCGTGTCAGAACAGACTGTTGTAAATGATCACGAAAGGCTTAGCAGCGTGGATTCTCGAAGACATTCAAGTCAAAGATTTTCAAACTTACGATCCGTAAGCCGGGGATCATCTGGAAGAGGAAACAGTAACCGTCATTCCTTCTCAATCTCATACGGTGTGCCGACTGCAGTCAGTTCTCTTGAAACAACATCTGCAGGATGTGATATTCCTGCTTCAGCATCATCAGGAGTGCCTCCAGAAGTCTCACTTCGCCGCCTGGCTTACCTGAACAAGCCAGAGATTCCAGTATTATTGCTAGGTACTATAGCTGCAGCAGTCAATGGGGCAATCTTACCGATTTTTGGAATATTGATATCCAGTGTAATCAAGACCTTCTATGAGCCACCTCCTCAACTCCGTAAGGATTCGAAGTTTTGGGCATTAATCTTCATTGTTCTTGGAGTGGTAACTTTCATAGCACTGCCAGCAAGACAATACTTTTTTGCTGTGGCGGGGTGTAAGTTGATAAAACGAGTTCGGTCAATGTGCTATGAGAAGGTGGTTTACATGGAAGTAAGTTGGTTTGACGATCCTGAGCACTCAAGTGGTGCAATTGGTGCAAGGCTTTCTGCAGATGCAGCTTCTCTTCGTGCATTGGTTGGAGATGCTCTAGGTTTGCTGGTTGAGAATTCAGCAACTGCAATTGCTGGTTTGTGTATTGCTTTTGTGGCAAATTGGCAACTTGCTCTTATAATCCTGGTTTTGCTGCCTTTATTAGGATTAAATGGTTATGTTCAAGTCAAGTTCTTGAAAGGATTCAGTGCAGATGCAAAGAAAATGTACGAGGACGCAAGTCAAGTAGCCAATGATGCAGTGGGGAGTATTCGAACAATTGCTTCCTTTTGTGCTGAAGAGAAGGTGATTGAATTGTACCAGAAGAAATGTGAAGGCCCTATTAAGACAGGGATAAGACGAGGGTTAATCAGCGGGATAGGTTTTGGGCTATCGTTCTTTTTTCTTTTTTCTGTGTATGCCTGCAGTTTTTATGCTGGAGCCCGACTTGTTGCAGCAGGCAAGACAACATTCTCTGATGTTTTCCGGGTTTTCTTTGCTCTCACGATGACAGCTGTTGGAGTATCTCAGTCGGGTTCCCTAGCCCCTAATCTTGGTAAAGTAAAGAGCTCTGCTGCTTCCATATTTGCCATTCTTGACCGGAAATCAAAAATAGACTCTAGTGATGAATCTGGAACAACTATAGAAAATGTGAAGGGAGAAATTGAACTTCGCCATGTCAGTTTCAAGTATCCAACTAGACCTGACGTTCCAGTGTTCCAGGATCTTTGCTTGACCATTCGTCATGGCAAGACAGTTGCTTTGGTTGGAGAAAGTGGAAGTGGGAAATCGACAGTCGTCTCACTGTTGCAGAGATTTTATGACCCTGATTCGGGTCACATTACATTAGATGGAGTTGAAATCCAGAAGCTACAGCTCAAGTGGTTGAGACAGCAAATGGGACTGGTGAGCCAGGAGCCGGCATTGTTTAATGATACTATCAGAGCCAACATTGCATATGGAAAGGAAGGGAATGCAACAGAGGCTGAAATTATAGCTGCTGCAGAATTGGCAAATGCTCACAAGTTCATCTGTAGTTTACAACAGGGTTATGATACAATAGTAGGAGAGCGGGGGATTCAATTGTCCGGTGGACAGAAGCAAAGGGTGGCAATTGCACGAGCTATAATGAAGGCACCAAAGATACTACTACTAGATGAAGCCACAAGTGCTCTTGATGCTGAATCGGAACGAGTGGTTCAAGATGCATTGGACCGAATCATGGTGGATCGAACAACAATCGTGGTTGCCCATCGGTTATCCACAATAAAGAGTGCGGATGTAATCGCAGTGGTGAAAAATGGAGTCATTGCAGAGAAAGGAAAGCATGAAACATTGATCGGTATCAAGGATGGCATTTATGCTTCTTTGGTAGCATTGCATGCAAGTGCCTCATCTTAG

Protein Analysis

1294

Amino Acids

138.65

Weight (kDa)

6.71

Isoelectric Point (pI)

34.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 905, 1077, 1868, 2621
AasI GACNNNNNNGTC 1 cut(s) 1956
AccB1I GGYRCC 3 cut(s) 131, 674, 3616
AccBSI CCGCTC 1 cut(s) 3553
AccI GTMKAC 1 cut(s) 342
AclWI GGATC 6 cut(s) 1391, 1974, 2002, 2453, 3213, 3717
AcoI YGGCCR 1 cut(s) 64
AcsI RAATTY 3 cut(s) 1520, 1638, 2557
AcuI CTGAAG 4 cut(s) 1500, 1866, 2088, 2799
AfaI GTAC 5 cut(s) 144, 205, 2191, 2711, 2801
AhdI GACNNNNNGTC 1 cut(s) 3222
AjiI CACGTC 1 cut(s) 304
AjnI CCWGG 5 cut(s) 1410, 2145, 2625, 3201, 3393
AleI CACNNNNGTG 1 cut(s) 2472
AloI GAACNNNNNNTCC 2 cut(s) 1200, 1232
Alw21I GWGCWC 6 cut(s) 531, 1669, 1760, 2469, 3053, 3655
Alw26I GTCTC 7 cut(s) 403, 1023, 1082, 1152, 2137, 3286, 3364
AlwI GGATC 6 cut(s) 1391, 1974, 2002, 2453, 3213, 3717
AlwNI CAGNNNCTG 4 cut(s) 1546, 1682, 2567, 3467
AoxI GGCC 5 cut(s) 64, 540, 1399, 1588, 2818
ApoI RAATTY 3 cut(s) 1520, 1638, 2557
ArsI GACNNNNNNTTYG 2 cut(s) 3226, 3258
AseI ATTAAT 2 cut(s) 1356, 2312
Asp700I GAANNNNTTC 3 cut(s) 886, 1951, 2684
AspS9I GGNCC 6 cut(s) 228, 1588, 1817, 1840, 2819, 3694
AsuC2I CCSGG 2 cut(s) 1991, 2969
AsuHPI GGTGA 6 cut(s) 530, 622, 1574, 2800, 3400, 3787
AsuII TTCGAA 2 cut(s) 2297, 2755
AvaII GGWCC 4 cut(s) 228, 1817, 1840, 3694
AxyI CCTNAGG 1 cut(s) 1539
BaeI ACNNNNGTAYC 2 cut(s) 3528, 3561
BanI GGYRCC 3 cut(s) 131, 674, 3616
BanII GRGCYC 2 cut(s) 2926, 3053
BarI GAAGNNNNNNTAC 2 cut(s) 2417, 2449
BauI CACGAG 2 cut(s) 1660, 3600
BbsI GAAGAC 1 cut(s) 1954
Bbv12I GWGCWC 6 cut(s) 531, 1669, 1760, 2469, 3053, 3655
BbvCI CCTCAGC 1 cut(s) 6
BceAI ACGGC 2 cut(s) 66, 79
BciT130I CCWGG 5 cut(s) 1412, 2147, 2627, 3203, 3395
BciVI GTATCC 1 cut(s) 3183
BclI TGATCA 2 cut(s) 1719, 1915
BcnI CCSGG 2 cut(s) 1991, 2969
BcoDI GTCTC 7 cut(s) 403, 1023, 1082, 1152, 2137, 3286, 3364
BfaI CTAG 9 cut(s) 1242, 1328, 1614, 2186, 2540, 3023, 3102, 3180, 3635
BfuI GTATCC 1 cut(s) 3183
BlpI GCTNAGC 1 cut(s) 1928
Bme1390I CCNGG 7 cut(s) 1412, 1991, 2147, 2627, 2969, 3203, 3395
Bme18I GGWCC 4 cut(s) 228, 1817, 1840, 3694
BmeRI GACNNNNNGTC 1 cut(s) 3222
BmgBI CACGTC 1 cut(s) 304
BmgT120I GGNCC 6 cut(s) 228, 1588, 1817, 1840, 2819, 3694
BmrFI CCNGG 7 cut(s) 1412, 1991, 2147, 2627, 2969, 3203, 3395
BmrI ACTGGG 1 cut(s) 501
BmuI ACTGGG 1 cut(s) 501
BoxI GACNNNNGTC 4 cut(s) 1733, 2057, 2721, 3278
BpiI GAAGAC 1 cut(s) 1954
BplI GAGNNNNNCTC 2 cut(s) 1608, 1640
BpmI CTGGAG 3 cut(s) 423, 2109, 2940
Bpu10I CCTNAGC 2 cut(s) 6, 2463
Bpu1102I GCTNAGC 1 cut(s) 1928
Bpu14I TTCGAA 2 cut(s) 2297, 2755
BpuEI CTTGAG 4 cut(s) 1063, 1774, 2455, 3344
BpuMI CCSGG 2 cut(s) 1991, 2969
BsaBI GATNNNNATC 1 cut(s) 3824
BsaJI CCNNGG 6 cut(s) 177, 321, 543, 1153, 1219, 1990
BsaWI WCCGGW 4 cut(s) 1201, 1725, 3081, 3569
BsaXI ACNNNNNCTCC 6 cut(s) 585, 615, 809, 839, 963, 993
Bse118I RCCGGY 1 cut(s) 3400
Bse21I CCTNAGG 1 cut(s) 1539
Bse3DI GCAATG 3 cut(s) 3432, 3789, 3857
Bse8I GATNNNNATC 1 cut(s) 3824
BseBI CCWGG 5 cut(s) 1412, 2147, 2627, 3203, 3395
BseDI CCNNGG 6 cut(s) 177, 321, 543, 1153, 1219, 1990
BseJI GATNNNNATC 1 cut(s) 3824
BseMI GCAATG 3 cut(s) 3432, 3789, 3857
BseMII CTCAG 7 cut(s) 84, 1553, 1589, 1674, 1818, 2454, 3023
BseRI GAGGAG 1 cut(s) 2268
BsgI GTGCAG 2 cut(s) 1715, 2712
BshFI GGCC 5 cut(s) 66, 542, 1401, 1590, 2820
BshNI GGYRCC 3 cut(s) 131, 674, 3616
BsiHKAI GWGCWC 6 cut(s) 531, 1669, 1760, 2469, 3053, 3655
BsiSI CCGG 7 cut(s) 1202, 1726, 1990, 2968, 3082, 3401, 3570
BslFI GGGAC 3 cut(s) 241, 1557, 3396
BsmAI GTCTC 7 cut(s) 403, 1023, 1082, 1152, 2137, 3286, 3364
BsmBI CGTCTC 1 cut(s) 3286
BsmFI GGGAC 3 cut(s) 241, 1557, 3396
BsmI GAATGC 2 cut(s) 1774, 3460
BsnI GGCC 5 cut(s) 66, 542, 1401, 1590, 2820
Bsp119I TTCGAA 2 cut(s) 2297, 2755
Bsp1286I GDGCHC 7 cut(s) 531, 1669, 1760, 2469, 2926, 3053, 3655
Bsp143I GATC 9 cut(s) 1383, 1719, 1915, 1979, 1994, 2458, 3205, 3709, 3819
Bsp1720I GCTNAGC 1 cut(s) 1928
Bsp19I CCATGG 2 cut(s) 543, 1219
BspANI GGCC 5 cut(s) 66, 542, 1401, 1590, 2820
BspCNI CTCAG 7 cut(s) 83, 1552, 1588, 1675, 1819, 2455, 3022
BspMAI CTGCAG 8 cut(s) 367, 1072, 2059, 2086, 2203, 2503, 2909, 3487
BspPI GGATC 6 cut(s) 1391, 1974, 2002, 2453, 3213, 3717
BspT104I TTCGAA 2 cut(s) 2297, 2755
BspT107I GGYRCC 3 cut(s) 131, 674, 3616
BsrBI CCGCTC 1 cut(s) 3553
BsrDI GCAATG 3 cut(s) 3432, 3789, 3857
BsrFI RCCGGY 1 cut(s) 3400
BssAI RCCGGY 1 cut(s) 3400
BssECI CCNNGG 6 cut(s) 177, 321, 543, 1153, 1219, 1990
BssMI GATC 9 cut(s) 1383, 1719, 1915, 1979, 1994, 2458, 3205, 3709, 3819
BssSI CACGAG 2 cut(s) 1660, 3600
BssT1I CCWWGG 4 cut(s) 177, 321, 543, 1219
Bst2BI CACGAG 2 cut(s) 1660, 3600
Bst2UI CCWGG 5 cut(s) 1412, 2147, 2627, 3203, 3395
Bst6I CTCTTC 3 cut(s) 1999, 2520, 2775
BstAPI GCANNNNNTGC 5 cut(s) 1055, 1141, 1256, 2486, 3863
BstBI TTCGAA 2 cut(s) 2297, 2755
BstC8I GCNNGC 9 cut(s) 804, 1029, 1333, 1862, 2355, 2905, 2941, 3402, 3864
BstDSI CCRYGG 3 cut(s) 543, 1153, 1219
BstENI CCTNNNNNAGG 1 cut(s) 2643
BstKTI GATC 9 cut(s) 1386, 1722, 1918, 1982, 1997, 2461, 3208, 3712, 3822
BstMAI GTCTC 7 cut(s) 403, 1023, 1082, 1152, 2137, 3286, 3364
BstMBI GATC 9 cut(s) 1383, 1719, 1915, 1979, 1994, 2458, 3205, 3709, 3819
BstNI CCWGG 5 cut(s) 1412, 2147, 2627, 3203, 3395
BstNSI RCATGY 1 cut(s) 3866
BstPAI GACNNNNGTC 4 cut(s) 1733, 2057, 2721, 3278
BstSCI CCNGG 7 cut(s) 1410, 1989, 2145, 2625, 2967, 3201, 3393
BstV2I GAAGAC 1 cut(s) 1954
BstX2I RGATCY 1 cut(s) 3205
BstYI RGATCY 1 cut(s) 3205
Bsu36I CCTNAGG 1 cut(s) 1539
BsuI GTATCC 1 cut(s) 3183
BsuRI GGCC 5 cut(s) 66, 542, 1401, 1590, 2820
BtgI CCRYGG 3 cut(s) 543, 1153, 1219
BtrI CACGTC 1 cut(s) 304
BtsI GCAGTG 3 cut(s) 2348, 2748, 3777
Cac8I GCNNGC 9 cut(s) 804, 1029, 1333, 1862, 2355, 2905, 2941, 3402, 3864
CaiI CAGNNNCTG 4 cut(s) 1546, 1682, 2567, 3467
Cfr10I RCCGGY 1 cut(s) 3400
Cfr13I GGNCC 6 cut(s) 228, 1588, 1817, 1840, 2819, 3694
CseI GACGC 1 cut(s) 2726
Csp6I GTAC 5 cut(s) 143, 204, 2190, 2710, 2800
CspCI CAANNNNNGTGG 2 cut(s) 3705, 3740
CviQI GTAC 5 cut(s) 143, 204, 2190, 2710, 2800
DpnI GATC 9 cut(s) 1385, 1721, 1917, 1981, 1996, 2460, 3207, 3711, 3821
DpnII GATC 9 cut(s) 1383, 1719, 1915, 1979, 1994, 2458, 3205, 3709, 3819
DrdI GACNNNNNNGTC 1 cut(s) 1956
DriI GACNNNNNGTC 1 cut(s) 3222
DseDI GACNNNNNNGTC 1 cut(s) 1956
EaeI YGGCCR 1 cut(s) 64
Eam1104I CTCTTC 3 cut(s) 1999, 2520, 2775
Eam1105I GACNNNNNGTC 1 cut(s) 3222
EarI CTCTTC 3 cut(s) 1999, 2520, 2775
Ecl136II GAGCTC 1 cut(s) 3051
Eco130I CCWWGG 4 cut(s) 177, 321, 543, 1219
Eco147I AGGCCT 1 cut(s) 1401
Eco24I GRGCYC 2 cut(s) 2926, 3053
Eco32I GATATC 2 cut(s) 1150, 2244
Eco47I GGWCC 4 cut(s) 228, 1817, 1840, 3694
Eco53kI GAGCTC 1 cut(s) 3051
Eco57I CTGAAG 4 cut(s) 1500, 1866, 2088, 2799
Eco81I CCTNAGG 1 cut(s) 1539
EcoICRI GAGCTC 1 cut(s) 3051
EcoNI CCTNNNNNAGG 1 cut(s) 2643
EcoO109I RGGNCCY 3 cut(s) 228, 1840, 2819
EcoRI GAATTC 2 cut(s) 1638, 2557
EcoRII CCWGG 5 cut(s) 1410, 2145, 2625, 3201, 3393
EcoRV GATATC 2 cut(s) 1150, 2244
EcoT14I CCWWGG 4 cut(s) 177, 321, 543, 1219
EcoT22I ATGCAT 1 cut(s) 3691
EcoT38I GRGCYC 2 cut(s) 2926, 3053
ErhI CCWWGG 4 cut(s) 177, 321, 543, 1219
Esp3I CGTCTC 1 cut(s) 3286
FalI AAGNNNNNCTT 2 cut(s) 2121, 2153
FaqI GGGAC 3 cut(s) 241, 1557, 3396
FauI CCCGC 3 cut(s) 2374, 2849, 3546
FauNDI CATATG 1 cut(s) 3439
FbaI TGATCA 2 cut(s) 1719, 1915
FblI GTMKAC 1 cut(s) 342
FriOI GRGCYC 2 cut(s) 2926, 3053
FspBI CTAG 9 cut(s) 1242, 1328, 1614, 2186, 2540, 3023, 3102, 3180, 3635
GsuI CTGGAG 3 cut(s) 423, 2109, 2940
HaeIII GGCC 5 cut(s) 66, 542, 1401, 1590, 2820
HapII CCGG 7 cut(s) 1202, 1726, 1990, 2968, 3082, 3401, 3570
HgaI GACGC 1 cut(s) 2726
HincII GTYRAC 1 cut(s) 1005
HindII GTYRAC 1 cut(s) 1005
HindIII AAGCTT 2 cut(s) 155, 837
HpaII CCGG 7 cut(s) 1202, 1726, 1990, 2968, 3082, 3401, 3570
HphI GGTGA 6 cut(s) 530, 622, 1574, 2800, 3400, 3787
Hpy166II GTNNAC 8 cut(s) 343, 716, 789, 1005, 1820, 2434, 3521, 3575
Hpy8I GTNNAC 8 cut(s) 343, 716, 789, 1005, 1820, 2434, 3521, 3575
HpyCH4IV ACGT 2 cut(s) 303, 3189
HpySE526I ACGT 2 cut(s) 303, 3189
KroI GCCGGC 1 cut(s) 3400
KroNI GCCGGC 1 cut(s) 3402
Ksp22I TGATCA 2 cut(s) 1719, 1915
Kzo9I GATC 9 cut(s) 1383, 1719, 1915, 1979, 1994, 2458, 3205, 3709, 3819
LmnI GCTCC 5 cut(s) 356, 1016, 1850, 2921, 3397
MaeI CTAG 9 cut(s) 1242, 1328, 1614, 2186, 2540, 3023, 3102, 3180, 3635
MaeII ACGT 2 cut(s) 303, 3189
MaeIII GTNAC 4 cut(s) 397, 2015, 2335, 3317
MalI GATC 9 cut(s) 1385, 1721, 1917, 1981, 1996, 2460, 3207, 3711, 3821
MbiI CCGCTC 1 cut(s) 3553
MboI GATC 9 cut(s) 1383, 1719, 1915, 1979, 1994, 2458, 3205, 3709, 3819
MboII GAAGA 8 cut(s) 639, 1493, 1959, 2016, 2308, 2507, 2792, 2818
MfeI CAATTG 9 cut(s) 759, 1092, 1139, 1803, 2481, 2571, 2760, 3563, 3594
MflI RGATCY 1 cut(s) 3205
MhlI GDGCHC 7 cut(s) 531, 1669, 1760, 2469, 2926, 3053, 3655
MlyI GAGTC 3 cut(s) 80, 3092, 3795
MmeI TCCRAC 6 cut(s) 1246, 1396, 2509, 2980, 3200, 3229
Mph1103I ATGCAT 1 cut(s) 3691
MroNI GCCGGC 1 cut(s) 3400
MroXI GAANNNNTTC 3 cut(s) 886, 1951, 2684
MslI CAYNNNNRTG 3 cut(s) 1036, 2472, 3867
MspA1I CMGCKG 3 cut(s) 368, 2856, 2996
MspI CCGG 7 cut(s) 1202, 1726, 1990, 2968, 3082, 3401, 3570
MspR9I CCNGG 7 cut(s) 1412, 1991, 2147, 2627, 2969, 3203, 3395
MunI CAATTG 9 cut(s) 759, 1092, 1139, 1803, 2481, 2571, 2760, 3563, 3594
Mva1269I GAATGC 2 cut(s) 1774, 3460
MvaI CCWGG 5 cut(s) 1412, 2147, 2627, 3203, 3395
NaeI GCCGGC 1 cut(s) 3402
NciI CCSGG 2 cut(s) 1991, 2969
NcoI CCATGG 2 cut(s) 543, 1219
NdeI CATATG 1 cut(s) 3439
NdeII GATC 9 cut(s) 1383, 1719, 1915, 1979, 1994, 2458, 3205, 3709, 3819
NgoMIV GCCGGC 1 cut(s) 3400
NmuCI GTSAC 2 cut(s) 397, 3317
NsiI ATGCAT 1 cut(s) 3691
NspI RCATGY 1 cut(s) 3866
NspV TTCGAA 2 cut(s) 2297, 2755
OliI CACNNNNGTG 1 cut(s) 2472
PacI TTAATTAA 1 cut(s) 834
PaeI GCATGC 1 cut(s) 3866
PceI AGGCCT 1 cut(s) 1401
PcsI WCGNNNNNNNCGW 1 cut(s) 56
PctI GAATGC 2 cut(s) 1774, 3460
PdiI GCCGGC 1 cut(s) 3402
PdmI GAANNNNTTC 3 cut(s) 886, 1951, 2684
PfoI TCCNGGA 1 cut(s) 3201
PleI GAGTC 3 cut(s) 80, 3092, 3794
PpsI GAGTC 3 cut(s) 80, 3092, 3794
PpuMI RGGWCCY 2 cut(s) 228, 1840
PshAI GACNNNNGTC 4 cut(s) 1733, 2057, 2721, 3278
PshBI ATTAAT 2 cut(s) 1356, 2312
PsiI TTATAA 4 cut(s) 905, 1077, 1868, 2621
Psp124BI GAGCTC 1 cut(s) 3053
Psp5II RGGWCCY 2 cut(s) 228, 1840
Psp6I CCWGG 5 cut(s) 1410, 2145, 2625, 3201, 3393
PspGI CCWGG 5 cut(s) 1410, 2145, 2625, 3201, 3393
PspPI GGNCC 6 cut(s) 228, 1588, 1817, 1840, 2819, 3694
PspPPI RGGWCCY 2 cut(s) 228, 1840
PstI CTGCAG 8 cut(s) 367, 1072, 2059, 2086, 2203, 2503, 2909, 3487
PstNI CAGNNNCTG 4 cut(s) 1546, 1682, 2567, 3467
PsuI RGATCY 1 cut(s) 3205
PvuII CAGCTG 1 cut(s) 2996
RsaI GTAC 5 cut(s) 144, 205, 2191, 2711, 2801
RsaNI GTAC 5 cut(s) 143, 204, 2190, 2710, 2800
RseI CAYNNNNRTG 3 cut(s) 1036, 2472, 3867
SacI GAGCTC 1 cut(s) 3053
Sau3AI GATC 9 cut(s) 1383, 1719, 1915, 1979, 1994, 2458, 3205, 3709, 3819
Sau96I GGNCC 6 cut(s) 228, 1588, 1817, 1840, 2819, 3694
SchI GAGTC 3 cut(s) 80, 3092, 3795
ScrFI CCNGG 7 cut(s) 1412, 1991, 2147, 2627, 2969, 3203, 3395
SduI GDGCHC 7 cut(s) 531, 1669, 1760, 2469, 2926, 3053, 3655
SfuI TTCGAA 2 cut(s) 2297, 2755
SinI GGWCC 4 cut(s) 228, 1817, 1840, 3694
SmiMI CAYNNNNRTG 3 cut(s) 1036, 2472, 3867
SmlI CTYRAG 4 cut(s) 1042, 1753, 2470, 3359
SmoI CTYRAG 4 cut(s) 1042, 1753, 2470, 3359
SphI GCATGC 1 cut(s) 3866
SseBI AGGCCT 1 cut(s) 1401
SspI AATATT 4 cut(s) 450, 1215, 1450, 2238
SspMI CTAG 9 cut(s) 1242, 1328, 1614, 2186, 2540, 3023, 3102, 3180, 3635
SstI GAGCTC 1 cut(s) 3053
StuI AGGCCT 1 cut(s) 1401
StyD4I CCNGG 7 cut(s) 1410, 1989, 2145, 2625, 2967, 3201, 3393
StyI CCWWGG 4 cut(s) 177, 321, 543, 1219
TaiI ACGT 2 cut(s) 306, 3192
TaqI TCGA 8 cut(s) 59, 421, 1795, 1945, 2297, 2755, 3272, 3712
TaqII GACCGA 2 cut(s) 2397, 3711
TauI GCSGC 3 cut(s) 371, 740, 2145
TseFI GTSAC 2 cut(s) 397, 3317
Tsp45I GTSAC 2 cut(s) 397, 3317
TspGWI ACGGA 4 cut(s) 187, 1142, 1972, 2276
VpaK11BI GGWCC 4 cut(s) 228, 1817, 1840, 3694
VspI ATTAAT 2 cut(s) 1356, 2312
XagI CCTNNNNNAGG 1 cut(s) 2643
XapI RAATTY 3 cut(s) 1520, 1638, 2557
XceI RCATGY 1 cut(s) 3866
XcmI CCANNNNNNNNNTGG 1 cut(s) 2740
XmiI GTMKAC 1 cut(s) 342
XmnI GAANNNNTTC 3 cut(s) 886, 1951, 2684
XspI CTAG 9 cut(s) 1242, 1328, 1614, 2186, 2540, 3023, 3102, 3180, 3635
Zsp2I ATGCAT 1 cut(s) 3691
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.