pycom16g11900

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Reverse (-)
8280897 .. 8285508
4612 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g11900.7

Sequence Viewer

Length: 3093 bp
ATGGGCGAGAAGGTAGGAAGGTTCATCCAATTACTTGCCACATCCATTGGAGGCTTCATAATAGCATTTATTAAGGGATGGCTTCTCACCCTTGTCATGCTATCATCTCTTCCCCTTCTTGTCCTCTCAGGTGCTGTCATGGGCATCAATTTATCGAAGATGGCATCCCGTGGGCAAACTGCTTATTCACTGGCATCAACTGTGGTAGAGCAGACAGTTGGTTCAATCAGAACTGTTGTATCATTTACAGGAGAGAAACAGGCGATAGCTAATTACAACAACTCCTTAATAAAAGCTTACAAGTCGGGTGTGCACGAGGGTTTGGCTTCTGGTTTTGGGATTGGTGTTATTCTGTTTATTATAATGTCTAGTTATGGTTTCGCTATATGGTTTGGCGGAAAGATGATAGTTGAAAAAGGATATACTGGAGGAGAAGTAATCAATGTAATTTTCGCTGCGTTGACTGCCTCCATGTCTCTTGGGCAGGCTTCTCCATGCCTGAGTGCATTTGCTGCTGGAAAAGCCGCAGCTTATAAAATGTTTGAGACGATTAACAGAAAGCCGGAGATAGATTCTTATGACACTAATGGGCAGCAGTTACAAGACATCCGTGGAGACATAGAACTGAGGGATGTTTATTTCAGTTATCCTGCAAGACCAGATGAACAAATATTCCATGGATTTTCTCTCTCAATACCTAGCGGTGCAACTGCTGCTTTGGTTGGGCAGAGCGGAAGTGGTAAATCAACTGTGATCAGTTTGATTGAGAGGTTTTATGATCCCTTAGCTGGGGAAGTTCTTATTGATGGTATTAATCTCAAAGAGTTCCAGCTGAAATGGATCCGACAGAAAATAGGTCTTGTCAGCCAGGAACCCGTGTTGTTTACTTCTAGCATCAAAGATAACATTGCTTATGGGAAGGACGGTGCAACTAACGATGAAATAAGGGCTGCTATAGAGCTTGCTAATGCTGCTAAATTCATAGACAAACTGCCACAGGGACTAGACACAATGGTTGGTGAACATGGAACTCAGCTGTCTGGGGGCCAAAAGCAAAGAGTTGCTATAGCTAGAGCAATCCTGAAAGACCCAAGAATTCTACTTTTAGACGAAGCCACAAGTGCCCTCGATGCAGAATCTGAGAGAGTTGTGCAGGAGGCATTGGACAGAATTATGATTAATCGCACCACTGTCATTGTAGCCCATCGTTTGAGTACAGTAAGGAATGCTGACACCATTGCTGTTATACATAGAGGGGCAATCGTCGAAAAAGGTGTCCTTGACGCAGCACCTGCAGAATCTGATATTCTTGCTTCAAAATCATCAAGAGTACCTCCAGAAGTCTCACTTCGCCGCCTAGCTTACCTGAACAAGCCAGAGATCCCAGTGTTGTTCCTAGGTACAATAGCTGCAGCAGCCAATGGGGTAGTCTTACCTATTTTTGGGTTATTGGTATCCAGTGTAATAAAGACCTTCTTTGAGCCACCTCAAGAACTCCGGAAGCATTCAAAGTTTTGGGCATTAATCTTTATTGTTCTTGGAGTGGGATCTTTAATAGCACTTCCAGCAAGTCACTACTTTTTTTCTGTGGCTGGATTTAAATTAATAAAACGAGTCCGATCTATGTGCTTTGAGAAGGTAGTTTACATGGAAGTAAGTTGGTTTGACGACCCTGAGCACTCAAGTGGTGCAATTGGCGCAAGGCTTTCTGCAGATGCAGCTTCTCTGAGGGGGCTGCTTGGAGATGCTCTTGGTTTGCTTGTTCAGAATTTAGCAACTGCAATTGCTGGTTTGTTGATTGCTTTTGTGGCAAATTGGCAACTTGCACTTATAATTCTTGTTTTGCTGCCTCTGTTAGGAGTAAATGGTTATTTTCACGTCAAGTTCATGAAAGGATTCAGTGCAGATGCAAAGAAAATGTACGAGGAAGCAAGTCAAGTAGCGAATGATGCTGTAGGGAGTATTAGAACAATTGCTTCCTTTTGTGCTGAAGAGAAGGTGATTGAATTGTACCAGAAAAAATGTGAAGGCCCTATTAAGACAGTGATCAGGCAAGGGTTAATCAGTGGAATAGGATTTGGTCTATCCTTCTTTTTTCTGTTTTCTGTGTACGCCACTAGTTTTTACGCAGGAGCCCGACTTGTTTCAGCTGGAAAGACAACATTCGCTGATGTTTTCCGGGTTTTCTTTGCTCTTACTATGACAGCTGTTGGAGTGTCTCAGTCGGGCTCCCTAGCTACTGATGTAAGTAAAGCAAAGAGCTCTGCTGCTTCTATATTTGCAATTATCGATCGAAAATCAAAAATAGACTCCAGTGATGATTCTGGAACAATGATAGAAAATGTGAAAGGCGAAATTGAATTCCGCCATGTCAGCTTCAAGTATCCAACTCGACCTGACGTGCCAATCTTCCAGGACCTTTGCTTGACCATTCGTCGTGGCAAGACGGTTGCTCTGGTTGGAGAAAGTGGAAGTGGGAAATCGACAGTCGTCTCATTGTTGCAGAGATTTTATGACCCTGATTCAGGTCACATTACACTAGATGGAATCGAAATCCAAAAGCTACAGTTGAAGTGGTTGAGGCAGCAAATGGGGCTGGTGAGCCAGGAGCCTGTGTTATTTAATGAAACTATCCGAGCCAACATTGCATATGGAAAGGAAGGGGATGTAACAGAAGCTGAAATTATAGCTGCAGCAGAATTGGCAAACGCTCACAAGTTCATCAGTAGTTTACAACAGGGTTACGATACAATCGTAGGAGAGCGGGGGGTTCAGCTGTCCGGCGGACAGAAGCAAAGGGTGGCAATTGCAAGAGCTATAATGAAGGCACCAAAGATTTTACTACTAGATGAAGCCACAAGTGCGCTCGACGCTGAATCCGAACGAGTTGTTCAAGACGCACTGGATCGCGTCATGGTGGATCGAACCACGGTGGTGGTTGCTCATCGGTTATCAACGATTAAGAGTGCAGATTTAATAGCAGTGGTGAAAAATGGAGTGATTGCAGAGAAAGGAACGCATGAAACTTTGATCAACGTCGAGGATGGCATTTATGCTTCTTTGGTTGCTTTGCATGCAAGTGCCTCATCTTAG

Protein Analysis

1031

Amino Acids

110.9

Weight (kDa)

8.24

Isoelectric Point (pI)

33.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 362, 534, 1832
AarI CACCTGC 1 cut(s) 1300
Acc36I ACCTGC 1 cut(s) 1300
AccB1I GGYRCC 1 cut(s) 2827
AccBSI CCGCTC 2 cut(s) 732, 2764
AccII CGCG 1 cut(s) 2910
AccIII TCCGGA 1 cut(s) 1497
AciI CCGC 8 cut(s) 396, 525, 702, 732, 1354, 2365, 2764, 2784
AclWI GGATC 7 cut(s) 773, 835, 848, 1375, 1555, 2913, 2928
AcsI RAATTY 4 cut(s) 977, 1095, 1768, 2360
AcuI CTGAAG 1 cut(s) 2010
AfaI GTAC 6 cut(s) 1216, 1332, 1402, 1922, 2012, 2111
AfiI CCNNNNNNNGG 5 cut(s) 788, 789, 1442, 1856, 2525
AgsI TTSAA 9 cut(s) 225, 413, 1317, 1509, 2006, 2360, 2380, 2572, 2894
AhdI GACNNNNNGTC 1 cut(s) 2433
AhlI ACTAGT 1 cut(s) 2117
AjiI CACGTC 2 cut(s) 1879, 2401
AjnI CCWGG 3 cut(s) 867, 2412, 2604
AleI CACNNNNGTG 2 cut(s) 1683, 2933
AloI GAACNNNNNNTCC 2 cut(s) 657, 689
Alw21I GWGCWC 3 cut(s) 315, 1680, 2264
Alw26I GTCTC 6 cut(s) 480, 539, 609, 1348, 2223, 2497
Alw44I GTGCAC 1 cut(s) 311
AlwI GGATC 7 cut(s) 773, 835, 848, 1375, 1555, 2913, 2928
AlwNI CAGNNNCTG 5 cut(s) 134, 1139, 1292, 1301, 2678
Aor13HI TCCGGA 1 cut(s) 1497
AoxI GGCC 2 cut(s) 1045, 2029
ApaLI GTGCAC 1 cut(s) 311
ApoI RAATTY 4 cut(s) 977, 1095, 1768, 2360
ArsI GACNNNNNNTTYG 2 cut(s) 1260, 1292
AseI ATTAAT 4 cut(s) 813, 1179, 1523, 1604
Asp700I GAANNNNTTC 1 cut(s) 1895
AspA2I CCTAGG 1 cut(s) 1396
AspLEI GCGC 2 cut(s) 1700, 2866
AspS9I GGNCC 3 cut(s) 1045, 2030, 2416
AsuC2I CCSGG 1 cut(s) 2180
AsuHPI GGTGA 5 cut(s) 79, 1031, 2011, 2611, 2998
AvaII GGWCC 1 cut(s) 2416
AvrII CCTAGG 1 cut(s) 1396
BaeGI GKGCMC 2 cut(s) 315, 1126
BaeI ACNNNNGTAYC 4 cut(s) 222, 255, 2739, 2772
BamHI GGATCC 1 cut(s) 840
BanI GGYRCC 1 cut(s) 2827
BanII GRGCYC 3 cut(s) 2137, 2231, 2264
BarI GAAGNNNNNNTAC 2 cut(s) 1628, 1660
BauI CACGAG 1 cut(s) 314
Bbv12I GWGCWC 3 cut(s) 315, 1680, 2264
BccI CCATC 6 cut(s) 72, 154, 800, 1212, 2537, 3038
BcgI CGANNNNNNTGC 2 cut(s) 1608, 1642
BciT130I CCWGG 3 cut(s) 869, 2414, 2606
BciVI GTATCC 2 cut(s) 1465, 2394
BclI TGATCA 3 cut(s) 753, 2046, 3030
BcnI CCSGG 1 cut(s) 2180
BcoDI GTCTC 6 cut(s) 480, 539, 609, 1348, 2223, 2497
BcuI ACTAGT 1 cut(s) 2117
BfmI CTRYAG 8 cut(s) 954, 1065, 1293, 1410, 1710, 1953, 2564, 2691
BfuAI ACCTGC 1 cut(s) 1300
BfuI GTATCC 2 cut(s) 1465, 2394
BlnI CCTAGG 1 cut(s) 1396
Bme1390I CCNGG 4 cut(s) 869, 2180, 2414, 2606
Bme18I GGWCC 1 cut(s) 2416
BmeRI GACNNNNNGTC 1 cut(s) 2433
BmgBI CACGTC 2 cut(s) 1879, 2401
BmgT120I GGNCC 3 cut(s) 1045, 2030, 2416
BmiI GGNNCC 7 cut(s) 842, 873, 1046, 2134, 2230, 2610, 2829
BmrFI CCNGG 4 cut(s) 869, 2180, 2414, 2606
BmrI ACTGGG 1 cut(s) 1379
BmsI GCATC 9 cut(s) 153, 173, 203, 903, 1120, 1705, 1735, 1897, 1939
BmuI ACTGGG 1 cut(s) 1379
BoxI GACNNNNGTC 1 cut(s) 2489
BpmI CTGGAG 3 cut(s) 447, 1320, 2296
Bpu10I CCTNAGC 2 cut(s) 784, 1674
BpuEI CTTGAG 2 cut(s) 1473, 1666
BpuMI CCSGG 1 cut(s) 2180
Bsa29I ATCGAT 1 cut(s) 2289
BsaJI CCNNGG 5 cut(s) 169, 610, 676, 1396, 2928
BsaWI WCCGGW 1 cut(s) 1497
BsaXI ACNNNNNCTCC 6 cut(s) 266, 296, 420, 450, 2600, 2630
Bsc4I CCNNNNNNNGG 5 cut(s) 788, 789, 1442, 1856, 2525
Bse1I ACTGG 6 cut(s) 195, 430, 1385, 1458, 2313, 2907
Bse3DI GCAATG 3 cut(s) 906, 1236, 2643
BseAI TCCGGA 1 cut(s) 1497
BseBI CCWGG 3 cut(s) 869, 2414, 2606
BseCI ATCGAT 1 cut(s) 2289
BseDI CCNNGG 5 cut(s) 169, 610, 676, 1396, 2928
BseGI GGATG 8 cut(s) 24, 41, 83, 164, 606, 637, 2671, 3049
BseLI CCNNNNNNNGG 5 cut(s) 788, 789, 1442, 1856, 2525
BseMI GCAATG 3 cut(s) 906, 1236, 2643
BseMII CTCAG 8 cut(s) 141, 491, 617, 1046, 1131, 1665, 1718, 2234
BseNI ACTGG 6 cut(s) 195, 430, 1385, 1458, 2313, 2907
BseRI GAGGAG 1 cut(s) 444
BseSI GKGCMC 2 cut(s) 315, 1126
BseYI CCCAGC 1 cut(s) 788
BsgI GTGCAG 3 cut(s) 1172, 1923, 2988
Bsh1236I CGCG 1 cut(s) 2910
Bsh1285I CGRYCG 1 cut(s) 2293
BshFI GGCC 2 cut(s) 1047, 2031
BshNI GGYRCC 1 cut(s) 2827
BshVI ATCGAT 1 cut(s) 2289
BsiEI CGRYCG 1 cut(s) 2293
BsiHKAI GWGCWC 3 cut(s) 315, 1680, 2264
BsiSI CCGG 4 cut(s) 563, 1498, 2179, 2781
BslFI GGGAC 1 cut(s) 1014
BslI CCNNNNNNNGG 5 cut(s) 788, 789, 1442, 1856, 2525
BsmAI GTCTC 6 cut(s) 480, 539, 609, 1348, 2223, 2497
BsmBI CGTCTC 2 cut(s) 539, 2497
BsmFI GGGAC 1 cut(s) 1014
BsmI GAATGC 2 cut(s) 1231, 1504
BsnI GGCC 2 cut(s) 1047, 2031
Bsp1286I GDGCHC 6 cut(s) 315, 1126, 1680, 2137, 2231, 2264
Bsp13I TCCGGA 1 cut(s) 1497
Bsp19I CCATGG 1 cut(s) 676
BspACI CCGC 8 cut(s) 396, 525, 702, 732, 1354, 2365, 2764, 2784
BspANI GGCC 2 cut(s) 1047, 2031
BspCNI CTCAG 8 cut(s) 140, 492, 618, 1045, 1132, 1666, 1719, 2233
BspDI ATCGAT 1 cut(s) 2289
BspEI TCCGGA 1 cut(s) 1497
BspFNI CGCG 1 cut(s) 2910
BspHI TCATGA 1 cut(s) 1887
BspLI GGNNCC 7 cut(s) 842, 873, 1046, 2134, 2230, 2610, 2829
BspMAI CTGCAG 4 cut(s) 1297, 1414, 1714, 2695
BspMI ACCTGC 1 cut(s) 1300
BspPI GGATC 7 cut(s) 773, 835, 848, 1375, 1555, 2913, 2928
BspT107I GGYRCC 1 cut(s) 2827
BsrBI CCGCTC 2 cut(s) 732, 2764
BsrDI GCAATG 3 cut(s) 906, 1236, 2643
BsrI ACTGG 6 cut(s) 195, 430, 1385, 1458, 2313, 2907
BssECI CCNNGG 5 cut(s) 169, 610, 676, 1396, 2928
BssSI CACGAG 1 cut(s) 314
BssT1I CCWWGG 2 cut(s) 676, 1396
Bst2BI CACGAG 1 cut(s) 314
Bst2UI CCWGG 3 cut(s) 869, 2414, 2606
Bst6I CTCTTC 2 cut(s) 114, 1986
BstAPI GCANNNNNTGC 3 cut(s) 512, 713, 1292
BstC8I GCNNGC 3 cut(s) 486, 963, 3075
BstDSI CCRYGG 4 cut(s) 169, 610, 676, 2928
BstENI CCTNNNNNAGG 2 cut(s) 1854, 2523
BstF5I GGATG 8 cut(s) 24, 41, 83, 164, 606, 637, 2671, 3049
BstFNI CGCG 1 cut(s) 2910
BstHHI GCGC 2 cut(s) 1700, 2866
BstMAI GTCTC 6 cut(s) 480, 539, 609, 1348, 2223, 2497
BstMCI CGRYCG 1 cut(s) 2293
BstNI CCWGG 3 cut(s) 869, 2414, 2606
BstNSI RCATGY 1 cut(s) 3077
BstPAI GACNNNNGTC 1 cut(s) 2489
BstSCI CCNGG 4 cut(s) 867, 2178, 2412, 2604
BstSFI CTRYAG 8 cut(s) 954, 1065, 1293, 1410, 1710, 1953, 2564, 2691
BstSLI GKGCMC 2 cut(s) 315, 1126
BstUI CGCG 1 cut(s) 2910
BstX2I RGATCY 3 cut(s) 840, 1380, 1547
BstXI CCANNNNNNTGG 1 cut(s) 2935
BstYI RGATCY 3 cut(s) 840, 1380, 1547
Bsu15I ATCGAT 1 cut(s) 2289
BsuI GTATCC 2 cut(s) 1465, 2394
BsuRI GGCC 2 cut(s) 1047, 2031
BsuTUI ATCGAT 1 cut(s) 2289
BtgI CCRYGG 4 cut(s) 169, 610, 676, 2928
BtrI CACGTC 2 cut(s) 1879, 2401
BtsCI GGATG 8 cut(s) 24, 41, 83, 164, 606, 637, 2671, 3049
BtsI GCAGTG 1 cut(s) 2988
BveI ACCTGC 1 cut(s) 1300
Cac8I GCNNGC 3 cut(s) 486, 963, 3075
CaiI CAGNNNCTG 5 cut(s) 134, 1139, 1292, 1301, 2678
CciI TCATGA 1 cut(s) 1887
CfoI GCGC 2 cut(s) 1700, 2866
Cfr13I GGNCC 3 cut(s) 1045, 2030, 2416
ClaI ATCGAT 1 cut(s) 2289
CseI GACGC 4 cut(s) 1292, 2879, 2899, 2906
Csp6I GTAC 6 cut(s) 1215, 1331, 1401, 1921, 2011, 2110
CspCI CAANNNNNGTGG 4 cut(s) 28, 63, 1177, 1212
CviQI GTAC 6 cut(s) 1215, 1331, 1401, 1921, 2011, 2110
DraI TTTAAA 1 cut(s) 1600
DriI GACNNNNNGTC 1 cut(s) 2433
Eam1104I CTCTTC 2 cut(s) 114, 1986
Eam1105I GACNNNNNGTC 1 cut(s) 2433
EarI CTCTTC 2 cut(s) 114, 1986
EciI GGCGGA 3 cut(s) 411, 2354, 2799
Ecl136II GAGCTC 1 cut(s) 2262
Eco130I CCWWGG 2 cut(s) 676, 1396
Eco24I GRGCYC 3 cut(s) 2137, 2231, 2264
Eco47I GGWCC 1 cut(s) 2416
Eco53kI GAGCTC 1 cut(s) 2262
Eco57I CTGAAG 1 cut(s) 2010
EcoICRI GAGCTC 1 cut(s) 2262
EcoNI CCTNNNNNAGG 2 cut(s) 1854, 2523
EcoO109I RGGNCCY 2 cut(s) 2030, 2416
EcoRI GAATTC 2 cut(s) 1095, 2360
EcoRII CCWGG 3 cut(s) 867, 2412, 2604
EcoT14I CCWWGG 2 cut(s) 676, 1396
EcoT38I GRGCYC 3 cut(s) 2137, 2231, 2264
ErhI CCWWGG 2 cut(s) 676, 1396
Esp3I CGTCTC 2 cut(s) 539, 2497
FalI AAGNNNNNCTT 6 cut(s) 1263, 1295, 1332, 1364, 1460, 1492
FaqI GGGAC 1 cut(s) 1014
FauI CCCGC 1 cut(s) 2757
FauNDI CATATG 1 cut(s) 2650
FbaI TGATCA 3 cut(s) 753, 2046, 3030
FokI GGATG 8 cut(s) 11, 28, 90, 151, 593, 644, 2678, 3056
FriOI GRGCYC 3 cut(s) 2137, 2231, 2264
GlaI GCGC 2 cut(s) 1699, 2865
GsaI CCCAGC 1 cut(s) 792
GsuI CTGGAG 3 cut(s) 447, 1320, 2296
HaeIII GGCC 2 cut(s) 1047, 2031
HapII CCGG 4 cut(s) 563, 1498, 2179, 2781
HgaI GACGC 4 cut(s) 1292, 2879, 2899, 2906
HhaI GCGC 2 cut(s) 1700, 2866
Hin6I GCGC 2 cut(s) 1698, 2864
HinP1I GCGC 2 cut(s) 1698, 2864
HincII GTYRAC 1 cut(s) 462
HindII GTYRAC 1 cut(s) 462
HindIII AAGCTT 1 cut(s) 294
HpaII CCGG 4 cut(s) 563, 1498, 2179, 2781
HphI GGTGA 5 cut(s) 79, 1031, 2011, 2611, 2998
Hpy166II GTNNAC 7 cut(s) 313, 462, 885, 1022, 1645, 2110, 2732
Hpy188I TCNGA 9 cut(s) 230, 845, 1141, 1303, 1619, 1728, 1767, 2636, 2881
Hpy188III TCNNGA 8 cut(s) 1081, 1326, 1337, 1490, 1498, 1888, 2325, 2894
Hpy8I GTNNAC 7 cut(s) 313, 462, 885, 1022, 1645, 2110, 2732
Hpy99I CGWCG 4 cut(s) 1268, 2439, 2873, 3041
HpyCH4IV ACGT 3 cut(s) 1878, 2400, 3036
HpySE526I ACGT 3 cut(s) 1878, 2400, 3036
HspAI GCGC 2 cut(s) 1698, 2864
Kpn2I TCCGGA 1 cut(s) 1497
Ksp22I TGATCA 3 cut(s) 753, 2046, 3030
LmnI GCTCC 3 cut(s) 2132, 2234, 2608
LweI GCATC 9 cut(s) 153, 173, 203, 903, 1120, 1705, 1735, 1897, 1939
MaeII ACGT 3 cut(s) 1878, 2400, 3036
MaeIII GTNAC 5 cut(s) 597, 1571, 2528, 2668, 2741
MbiI CCGCTC 2 cut(s) 732, 2764
MboII GAAGA 4 cut(s) 101, 169, 2003, 2401
MfeI CAATTG 4 cut(s) 1692, 1782, 1971, 2805
MflI RGATCY 3 cut(s) 840, 1380, 1547
MhlI GDGCHC 6 cut(s) 315, 1126, 1680, 2137, 2231, 2264
MlyI GAGTC 2 cut(s) 1623, 2303
MmeI TCCRAC 4 cut(s) 868, 2191, 2411, 2440
MroI TCCGGA 1 cut(s) 1497
MroXI GAANNNNTTC 1 cut(s) 1895
MslI CAYNNNNRTG 3 cut(s) 1683, 2933, 3078
MspA1I CMGCKG 5 cut(s) 832, 1036, 2150, 2207, 2776
MspI CCGG 4 cut(s) 563, 1498, 2179, 2781
MspR9I CCNGG 4 cut(s) 869, 2180, 2414, 2606
MunI CAATTG 4 cut(s) 1692, 1782, 1971, 2805
Mva1269I GAATGC 2 cut(s) 1231, 1504
MvaI CCWGG 3 cut(s) 869, 2414, 2606
MvnI CGCG 1 cut(s) 2910
NciI CCSGG 1 cut(s) 2180
NcoI CCATGG 1 cut(s) 676
NdeI CATATG 1 cut(s) 2650
NlaIV GGNNCC 7 cut(s) 842, 873, 1046, 2134, 2230, 2610, 2829
NmuCI GTSAC 2 cut(s) 1571, 2528
NspI RCATGY 1 cut(s) 3077
OliI CACNNNNGTG 2 cut(s) 1683, 2933
PaeI GCATGC 1 cut(s) 3077
PagI TCATGA 1 cut(s) 1887
PaqCI CACCTGC 1 cut(s) 1300
PcsI WCGNNNNNNNCGW 2 cut(s) 2751, 2877
PctI GAATGC 2 cut(s) 1231, 1504
PdmI GAANNNNTTC 1 cut(s) 1895
PfeI GAWTC 8 cut(s) 572, 1136, 1298, 1896, 2321, 2522, 2547, 2876
PfoI TCCNGGA 1 cut(s) 2412
Ple19I CGATCG 1 cut(s) 2293
PleI GAGTC 2 cut(s) 1622, 2303
PpsI GAGTC 2 cut(s) 1622, 2303
PpuMI RGGWCCY 1 cut(s) 2416
PshAI GACNNNNGTC 1 cut(s) 2489
PshBI ATTAAT 4 cut(s) 813, 1179, 1523, 1604
PsiI TTATAA 3 cut(s) 362, 534, 1832
Psp124BI GAGCTC 1 cut(s) 2264
Psp5II RGGWCCY 1 cut(s) 2416
Psp6I CCWGG 3 cut(s) 867, 2412, 2604
PspFI CCCAGC 1 cut(s) 788
PspGI CCWGG 3 cut(s) 867, 2412, 2604
PspN4I GGNNCC 7 cut(s) 842, 873, 1046, 2134, 2230, 2610, 2829
PspPI GGNCC 3 cut(s) 1045, 2030, 2416
PspPPI RGGWCCY 1 cut(s) 2416
PstI CTGCAG 4 cut(s) 1297, 1414, 1714, 2695
PstNI CAGNNNCTG 5 cut(s) 134, 1139, 1292, 1301, 2678
PsuI RGATCY 3 cut(s) 840, 1380, 1547
PvuI CGATCG 1 cut(s) 2293
PvuII CAGCTG 5 cut(s) 832, 1036, 2150, 2207, 2776
RsaI GTAC 6 cut(s) 1216, 1332, 1402, 1922, 2012, 2111
RsaNI GTAC 6 cut(s) 1215, 1331, 1401, 1921, 2011, 2110
RseI CAYNNNNRTG 3 cut(s) 1683, 2933, 3078
SacI GAGCTC 1 cut(s) 2264
Sau96I GGNCC 3 cut(s) 1045, 2030, 2416
SchI GAGTC 2 cut(s) 1623, 2303
ScrFI CCNGG 4 cut(s) 869, 2180, 2414, 2606
SduI GDGCHC 6 cut(s) 315, 1126, 1680, 2137, 2231, 2264
SfaNI GCATC 9 cut(s) 153, 173, 203, 903, 1120, 1705, 1735, 1897, 1939
SfcI CTRYAG 8 cut(s) 954, 1065, 1293, 1410, 1710, 1953, 2564, 2691
SinI GGWCC 1 cut(s) 2416
SmiI ATTTAAAT 1 cut(s) 1600
SmiMI CAYNNNNRTG 3 cut(s) 1683, 2933, 3078
SmlI CTYRAG 2 cut(s) 1488, 1681
SmoI CTYRAG 2 cut(s) 1488, 1681
SpeI ACTAGT 1 cut(s) 2117
SphI GCATGC 1 cut(s) 3077
SsiI CCGC 8 cut(s) 396, 525, 702, 732, 1354, 2365, 2764, 2784
SspI AATATT 1 cut(s) 672
SstI GAGCTC 1 cut(s) 2264
StyD4I CCNGG 4 cut(s) 867, 2178, 2412, 2604
StyI CCWWGG 2 cut(s) 676, 1396
SwaI ATTTAAAT 1 cut(s) 1600
TaiI ACGT 3 cut(s) 1881, 2403, 3039
TatI WGTACW 1 cut(s) 1214
TauI GCSGC 2 cut(s) 527, 1356
TfiI GAWTC 8 cut(s) 572, 1136, 1298, 1896, 2321, 2522, 2547, 2876
TseFI GTSAC 2 cut(s) 1571, 2528
Tsp45I GTSAC 2 cut(s) 1571, 2528
TspGWI ACGGA 1 cut(s) 599
VneI GTGCAC 1 cut(s) 311
VpaK11BI GGWCC 1 cut(s) 2416
VspI ATTAAT 4 cut(s) 813, 1179, 1523, 1604
XagI CCTNNNNNAGG 2 cut(s) 1854, 2523
XapI RAATTY 4 cut(s) 977, 1095, 1768, 2360
XceI RCATGY 1 cut(s) 3077
XmaJI CCTAGG 1 cut(s) 1396
XmnI GAANNNNTTC 1 cut(s) 1895
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.