Rroxscaffold_5G00369380

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Forward (+)
51201302 .. 51206386
5085 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00369380.1

Sequence Viewer

Length: 1206 bp
ATGAAAGGGTTCAGTGCAGATGCAAAGAAAATGTACGAGGACGCAAGCCAAGTAGCCAATGATGCTGTTGGGAGTATTAGAACAATTGCTTCCTTTTGTTCTGAAGAGAAGGTGATGGAACTGTACCGGAAAAAATGCGAAGGTCCTATTCAAAGTGGGATAAGACAAGGCTTAGTTAGCGGAATTGGTTTTGGGCTATCGTTCTTTTTGCTATTTTCTGTGTATGCCTGCAGTTTCTATGCTGGAGCCCGACTTGTTGCAGCAGGCAAGACAGAATTTTCTGACGTGTTTCAGGTTTTCTTTGCTCTCACTGTGACAGCTGTTGGAATATCTCAGTCGAACTCTCTATCCCCTGATGTAAGTAAAGGAAAGAGTTCTGCTTCTTCCATATTTGCAATTCTTGACGGCAAGTCAAAAATAGACTCTAGTGACAACTCTGGAACTACAATAGAAAATGTGAAGGGAGATATTGAGCTACGCCATGTCAGTTTCAAGTATCCAACTAGACCCAACGTGCCAATCTTCCAGGATCTTTGCTTGACCATTCGTCATGGCAAGACTGTTGCTCTGGTTGGAGAAAGTGGTAGTGGGAAGTCGACAGTGATCTCATTGTTGCAGAGATTTTATGACCCTGATTCAGGTCACATTACATTAGATGGAATTGAAATCCAAAAGCTACAACTGAAGTGGTTGAGACAGCAAATGGGGCTGGTGAGCCAAGAGCCTCTGCTGTTTAATGACACTATCCGAGCCAACATTGCATATGGAAAGGACGGGAATGCAACCGAAGCTGAAATTATAGCTGCAGCAGAATTGGCAAATGCGCACAAGTTCATTAGTAGCTTACAACAGGGTTACGATACAGTAGTAGGAGAACGGGGGGTCCAATTGTCAGGTGGACAGAAGCAAAGGGTGGCAATTGCACGAGCTATTATGAAGGCGCCAAAGATATTACTCCTAGATGAGGCTACCAGTGCTCTTGATGCTGAATCCGAACGAGTCGTTCAAGATGCATTGGACAGAGTTATGGTGGATCGAACAACAGTGGTAGTTGCCCATCGGTTATCGACAATCAGAAGTGCAGATTTGATAGCAGTGGTAAAGAATGAAGTCATTGCAGAGAAAGGAAAGCATGAGACTTTGATCAATATCAAGGATGGCACTTATGCTTCTCTGGTAGCATTACATGCAAGTGCCTCATCTTAG

Protein Analysis

401

Amino Acids

43.16

Weight (kDa)

7.06

Isoelectric Point (pI)

39.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 1 - 107 8.5e-19 ABC transporter transmembrane region
ABC_tran PF00005 176 - 325 8.7e-36 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 825
AccB1I GGYRCC 1 cut(s) 940
AccI GTMKAC 1 cut(s) 596
AciI CCGC 1 cut(s) 180
AclWI GGATC 2 cut(s) 537, 1041
AcsI RAATTY 1 cut(s) 275
AcuI CTGAAG 2 cut(s) 123, 704
AcyI GRCGYC 1 cut(s) 941
AfaI GTAC 2 cut(s) 35, 125
AfiI CCNNNNNNNGG 2 cut(s) 638, 964
AflIII ACRYGT 1 cut(s) 285
AgsI TTSAA 4 cut(s) 152, 493, 665, 1007
AhdI GACNNNNNGTC 2 cut(s) 409, 546
AjiI CACGTC 1 cut(s) 286
AjnI CCWGG 1 cut(s) 525
AloI GAACNNNNNNTCC 4 cut(s) 332, 364, 867, 899
AluBI AGCT 7 cut(s) 320, 475, 676, 791, 803, 843, 929
AluI AGCT 7 cut(s) 320, 475, 676, 791, 803, 843, 929
Alw21I GWGCWC 1 cut(s) 979
Alw26I GTCTC 2 cut(s) 688, 1130
AlwI GGATC 2 cut(s) 537, 1041
ApeKI GCWGC 3 cut(s) 260, 803, 806
ApoI RAATTY 1 cut(s) 275
Asp700I GAANNNNTTC 2 cut(s) 8, 373
AspLEI GCGC 2 cut(s) 826, 943
AspS9I GGNCC 2 cut(s) 143, 883
AsuHPI GGTGA 2 cut(s) 124, 724
AvaII GGWCC 2 cut(s) 143, 883
BaeI ACNNNNGTAYC 2 cut(s) 852, 885
BanI GGYRCC 1 cut(s) 940
BanII GRGCYC 1 cut(s) 250
BauI CACGAG 1 cut(s) 924
Bbv12I GWGCWC 1 cut(s) 979
BbvI GCAGC 3 cut(s) 272, 790, 818
BccI CCATC 4 cut(s) 109, 650, 1065, 1151
BceAI ACGGC 1 cut(s) 421
BciT130I CCWGG 1 cut(s) 527
BciVI GTATCC 1 cut(s) 507
BclI TGATCA 1 cut(s) 1143
BcoDI GTCTC 2 cut(s) 688, 1130
BfaI CTAG 3 cut(s) 426, 504, 959
BfmI CTRYAG 2 cut(s) 229, 804
BfoI RGCGCY 1 cut(s) 944
BfuI GTATCC 1 cut(s) 507
BisI GCNGC 3 cut(s) 261, 804, 807
BlsI GCNGC 3 cut(s) 262, 805, 808
Bme1390I CCNGG 1 cut(s) 527
Bme18I GGWCC 2 cut(s) 143, 883
BmeRI GACNNNNNGTC 2 cut(s) 409, 546
BmgBI CACGTC 1 cut(s) 286
BmgT120I GGNCC 2 cut(s) 143, 883
BmiI GGNNCC 3 cut(s) 247, 884, 942
BmrFI CCNGG 1 cut(s) 527
BmsI GCATC 4 cut(s) 10, 52, 973, 1000
BpmI CTGGAG 1 cut(s) 264
BsaBI GATNNNNATC 1 cut(s) 1148
BsaHI GRCGYC 1 cut(s) 941
BsaWI WCCGGW 1 cut(s) 126
Bsc4I CCNNNNNNNGG 2 cut(s) 638, 964
Bse1I ACTGG 1 cut(s) 972
Bse3DI GCAATG 2 cut(s) 756, 1113
Bse8I GATNNNNATC 1 cut(s) 1148
BseBI CCWGG 1 cut(s) 527
BseGI GGATG 1 cut(s) 1162
BseJI GATNNNNATC 1 cut(s) 1148
BseLI CCNNNNNNNGG 2 cut(s) 638, 964
BseMI GCAATG 2 cut(s) 756, 1113
BseMII CTCAG 1 cut(s) 347
BseNI ACTGG 1 cut(s) 972
BseXI GCAGC 3 cut(s) 272, 790, 818
BsgI GTGCAG 2 cut(s) 36, 1101
BshNI GGYRCC 1 cut(s) 940
BsiHKAI GWGCWC 1 cut(s) 979
BsiSI CCGG 1 cut(s) 127
BslI CCNNNNNNNGG 2 cut(s) 638, 964
BsmAI GTCTC 2 cut(s) 688, 1130
BsmI GAATGC 1 cut(s) 784
Bsp1286I GDGCHC 2 cut(s) 250, 979
Bsp143I GATC 4 cut(s) 529, 603, 1033, 1143
BspACI CCGC 1 cut(s) 180
BspCNI CTCAG 1 cut(s) 346
BspLI GGNNCC 3 cut(s) 247, 884, 942
BspMAI CTGCAG 2 cut(s) 233, 808
BspPI GGATC 2 cut(s) 537, 1041
BspT107I GGYRCC 1 cut(s) 940
BsrDI GCAATG 2 cut(s) 756, 1113
BsrI ACTGG 1 cut(s) 972
BssMI GATC 4 cut(s) 529, 603, 1033, 1143
BssNI GRCGYC 1 cut(s) 941
BssSI CACGAG 1 cut(s) 924
Bst2BI CACGAG 1 cut(s) 924
Bst2UI CCWGG 1 cut(s) 527
Bst4CI ACNGT 6 cut(s) 123, 313, 562, 601, 865, 1045
Bst6I CTCTTC 1 cut(s) 99
BstACI GRCGYC 1 cut(s) 941
BstAPI GCANNNNNTGC 1 cut(s) 1187
BstC8I GCNNGC 3 cut(s) 46, 229, 265
BstDEI CTNAG 3 cut(s) 172, 333, 1203
BstENI CCTNNNNNAGG 2 cut(s) 636, 962
BstF5I GGATG 1 cut(s) 1162
BstH2I RGCGCY 1 cut(s) 944
BstHHI GCGC 2 cut(s) 826, 943
BstKTI GATC 4 cut(s) 532, 606, 1036, 1146
BstMAI GTCTC 2 cut(s) 688, 1130
BstMBI GATC 4 cut(s) 529, 603, 1033, 1143
BstMWI GCNNNNNNNGC 9 cut(s) 62, 177, 706, 758, 788, 815, 974, 983, 1187
BstNI CCWGG 1 cut(s) 527
BstNSI RCATGY 1 cut(s) 1190
BstSCI CCNGG 1 cut(s) 525
BstSFI CTRYAG 2 cut(s) 229, 804
BstV1I GCAGC 3 cut(s) 272, 790, 818
BstX2I RGATCY 1 cut(s) 529
BstYI RGATCY 1 cut(s) 529
BsuI GTATCC 1 cut(s) 507
BtrI CACGTC 1 cut(s) 286
BtsCI GGATG 1 cut(s) 1162
BtsI GCAGTG 1 cut(s) 1101
BtsIMutI CAGTG 6 cut(s) 19, 309, 606, 979, 1050, 1101
Cac8I GCNNGC 3 cut(s) 46, 229, 265
CfoI GCGC 2 cut(s) 826, 943
Cfr13I GGNCC 2 cut(s) 143, 883
CseI GACGC 1 cut(s) 50
Csp6I GTAC 2 cut(s) 34, 124
CspCI CAANNNNNGTGG 2 cut(s) 668, 703
CviAII CATG 4 cut(s) 482, 551, 1133, 1187
CviQI GTAC 2 cut(s) 34, 124
DdeI CTNAG 3 cut(s) 172, 333, 1203
DinI GGCGCC 1 cut(s) 942
DpnI GATC 4 cut(s) 531, 605, 1035, 1145
DpnII GATC 4 cut(s) 529, 603, 1033, 1143
DriI GACNNNNNGTC 2 cut(s) 409, 546
Eam1104I CTCTTC 1 cut(s) 99
Eam1105I GACNNNNNGTC 2 cut(s) 409, 546
EarI CTCTTC 1 cut(s) 99
Eco24I GRGCYC 1 cut(s) 250
Eco47I GGWCC 2 cut(s) 143, 883
Eco57I CTGAAG 2 cut(s) 123, 704
EcoNI CCTNNNNNAGG 2 cut(s) 636, 962
EcoO109I RGGNCCY 1 cut(s) 143
EcoRII CCWGG 1 cut(s) 525
EcoT22I ATGCAT 1 cut(s) 1015
EcoT38I GRGCYC 1 cut(s) 250
EgeI GGCGCC 1 cut(s) 942
EheI GGCGCC 1 cut(s) 942
FaeI CATG 4 cut(s) 485, 554, 1136, 1190
FatI CATG 4 cut(s) 481, 550, 1132, 1186
FauNDI CATATG 1 cut(s) 763
FbaI TGATCA 1 cut(s) 1143
FblI GTMKAC 1 cut(s) 596
Fnu4HI GCNGC 3 cut(s) 261, 804, 807
FokI GGATG 1 cut(s) 1169
FriOI GRGCYC 1 cut(s) 250
Fsp4HI GCNGC 3 cut(s) 261, 804, 807
FspAI RTGCGCAY 1 cut(s) 825
FspBI CTAG 3 cut(s) 426, 504, 959
FspI TGCGCA 1 cut(s) 825
GlaI GCGC 2 cut(s) 825, 942
GluI GCNGC 3 cut(s) 261, 804, 807
GsuI CTGGAG 1 cut(s) 264
HaeII RGCGCY 1 cut(s) 944
HapII CCGG 1 cut(s) 127
HgaI GACGC 1 cut(s) 50
HhaI GCGC 2 cut(s) 826, 943
Hin1I GRCGYC 1 cut(s) 941
Hin1II CATG 4 cut(s) 485, 554, 1136, 1190
Hin6I GCGC 2 cut(s) 824, 941
HinP1I GCGC 2 cut(s) 824, 941
HincII GTYRAC 1 cut(s) 597
HindII GTYRAC 1 cut(s) 597
HinfI GANTC 4 cut(s) 422, 635, 989, 999
HpaII CCGG 1 cut(s) 127
HphI GGTGA 2 cut(s) 124, 724
Hpy166II GTNNAC 2 cut(s) 597, 899
Hpy188I TCNGA 5 cut(s) 103, 283, 749, 994, 1076
Hpy188III TCNNGA 4 cut(s) 401, 438, 980, 1007
Hpy8I GTNNAC 2 cut(s) 597, 899
HpyAV CCTTC 4 cut(s) 103, 134, 454, 931
HpyCH4III ACNGT 6 cut(s) 123, 313, 562, 601, 865, 1045
HpyCH4IV ACGT 2 cut(s) 285, 513
HpyF10VI GCNNNNNNNGC 9 cut(s) 62, 177, 706, 758, 788, 815, 974, 983, 1187
HpyF3I CTNAG 3 cut(s) 172, 333, 1203
HpySE526I ACGT 2 cut(s) 285, 513
Hsp92I GRCGYC 1 cut(s) 941
Hsp92II CATG 4 cut(s) 485, 554, 1136, 1190
HspAI GCGC 2 cut(s) 824, 941
KasI GGCGCC 1 cut(s) 940
Ksp22I TGATCA 1 cut(s) 1143
Kzo9I GATC 4 cut(s) 529, 603, 1033, 1143
LmnI GCTCC 1 cut(s) 245
Lsp1109I GCAGC 3 cut(s) 272, 790, 818
LweI GCATC 4 cut(s) 10, 52, 973, 1000
MaeI CTAG 3 cut(s) 426, 504, 959
MaeII ACGT 2 cut(s) 285, 513
MaeIII GTNAC 4 cut(s) 313, 428, 641, 854
MalI GATC 4 cut(s) 531, 605, 1035, 1145
MboI GATC 4 cut(s) 529, 603, 1033, 1143
MboII GAAGA 3 cut(s) 116, 375, 514
MfeI CAATTG 3 cut(s) 84, 887, 918
MflI RGATCY 1 cut(s) 529
MhlI GDGCHC 2 cut(s) 250, 979
MluCI AATT 9 cut(s) 84, 183, 275, 396, 660, 795, 812, 887, 918
Mly113I GGCGCC 1 cut(s) 941
MlyI GAGTC 2 cut(s) 416, 1008
MmeI TCCRAC 3 cut(s) 304, 524, 553
MnlI CCTC 3 cut(s) 31, 735, 958
Mph1103I ATGCAT 1 cut(s) 1015
MroXI GAANNNNTTC 2 cut(s) 8, 373
MseI TTAA 1 cut(s) 735
MslI CAYNNNNRTG 1 cut(s) 1191
MspA1I CMGCKG 1 cut(s) 320
MspI CCGG 1 cut(s) 127
MspR9I CCNGG 1 cut(s) 527
MunI CAATTG 3 cut(s) 84, 887, 918
Mva1269I GAATGC 1 cut(s) 784
MvaI CCWGG 1 cut(s) 527
MwoI GCNNNNNNNGC 9 cut(s) 62, 177, 706, 758, 788, 815, 974, 983, 1187
NarI GGCGCC 1 cut(s) 941
NdeI CATATG 1 cut(s) 763
NdeII GATC 4 cut(s) 529, 603, 1033, 1143
NlaIII CATG 4 cut(s) 485, 554, 1136, 1190
NlaIV GGNNCC 3 cut(s) 247, 884, 942
NmuCI GTSAC 3 cut(s) 313, 428, 641
NsbI TGCGCA 1 cut(s) 825
NsiI ATGCAT 1 cut(s) 1015
NspI RCATGY 1 cut(s) 1190
PctI GAATGC 1 cut(s) 784
PdmI GAANNNNTTC 2 cut(s) 8, 373
PfeI GAWTC 2 cut(s) 635, 989
PfoI TCCNGGA 1 cut(s) 525
PkrI GCNGC 3 cut(s) 262, 805, 808
PleI GAGTC 2 cut(s) 416, 1007
PluTI GGCGCC 1 cut(s) 944
PpsI GAGTC 2 cut(s) 416, 1007
PpuMI RGGWCCY 1 cut(s) 143
Psp5II RGGWCCY 1 cut(s) 143
Psp6I CCWGG 1 cut(s) 525
PspGI CCWGG 1 cut(s) 525
PspN4I GGNNCC 3 cut(s) 247, 884, 942
PspPI GGNCC 2 cut(s) 143, 883
PspPPI RGGWCCY 1 cut(s) 143
PstI CTGCAG 2 cut(s) 233, 808
PsuI RGATCY 1 cut(s) 529
PvuII CAGCTG 1 cut(s) 320
RsaI GTAC 2 cut(s) 35, 125
RsaNI GTAC 2 cut(s) 34, 124
RseI CAYNNNNRTG 1 cut(s) 1191
SalI GTCGAC 1 cut(s) 595
SaqAI TTAA 1 cut(s) 735
SatI GCNGC 3 cut(s) 261, 804, 807
Sau3AI GATC 4 cut(s) 529, 603, 1033, 1143
Sau96I GGNCC 2 cut(s) 143, 883
SchI GAGTC 2 cut(s) 416, 1008
ScrFI CCNGG 1 cut(s) 527
SduI GDGCHC 2 cut(s) 250, 979
SfaNI GCATC 4 cut(s) 10, 52, 973, 1000
SfcI CTRYAG 2 cut(s) 229, 804
SfoI GGCGCC 1 cut(s) 942
SinI GGWCC 2 cut(s) 143, 883
SmiMI CAYNNNNRTG 1 cut(s) 1191
Sse9I AATT 9 cut(s) 84, 183, 275, 396, 660, 795, 812, 887, 918
SsiI CCGC 1 cut(s) 180
SspDI GGCGCC 1 cut(s) 940
SspMI CTAG 3 cut(s) 426, 504, 959
StyD4I CCNGG 1 cut(s) 525
TaaI ACNGT 6 cut(s) 123, 313, 562, 601, 865, 1045
TaiI ACGT 2 cut(s) 288, 516
TaqI TCGA 4 cut(s) 338, 596, 1036, 1067
TasI AATT 9 cut(s) 84, 183, 275, 396, 660, 795, 812, 887, 918
TfiI GAWTC 2 cut(s) 635, 989
Tru1I TTAA 1 cut(s) 735
Tru9I TTAA 1 cut(s) 735
TscAI CASTG 6 cut(s) 19, 316, 606, 979, 1050, 1101
TseFI GTSAC 3 cut(s) 313, 428, 641
TseI GCWGC 3 cut(s) 260, 803, 806
Tsp45I GTSAC 3 cut(s) 313, 428, 641
TspDTI ATGAA 4 cut(s) 17, 823, 950, 1122
TspRI CASTG 6 cut(s) 19, 316, 606, 979, 1050, 1101
VpaK11BI GGWCC 2 cut(s) 143, 883
XagI CCTNNNNNAGG 2 cut(s) 636, 962
XapI RAATTY 1 cut(s) 275
XceI RCATGY 1 cut(s) 1190
XcmI CCANNNNNNNNNTGG 1 cut(s) 893
XmiI GTMKAC 1 cut(s) 596
XmnI GAANNNNTTC 2 cut(s) 8, 373
XspI CTAG 3 cut(s) 426, 504, 959
Zsp2I ATGCAT 1 cut(s) 1015
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.