Rroxscaffold_5G00367590

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000116
Physical Location & Seq
Reverse (-)
49414556 .. 49424022
9467 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00367590.1

Sequence Viewer

Length: 1479 bp
ATGCTGCAGAAACAATTGGGTAATCTTCGTACCCTTTTCGAGATGTCATGCTGGATGAGCACTGGAGAGAGACAGGCTGCAGGAATACGAAGTTTATACTTGAAGACCATACTGAGGCAAGATGTCAGCTTTTTTGATCAAGAAATCAACTCTGGGGAAATTCTTGGGAGGATGTCAGGTGATACTGTGCTCATTAAAGAGGCAATGGGCGAGAAGGAATGCAGCTACTTTATAGCATTTTTAAGGGATGGCTTCTCACCCTTGTCATGCTATCCTCTATTCCCCCTCGTCTTATCTGGTGCTGTCATGAGCCATTTCATAGTGAAATTGGCGTCCCATGGACAAGCTGCATATTCAGAAGGAGCAATTGTGGTAGAGGAGACAATTGGTTCTATCAGAACTGTTGCATCGTTCACAGGGGAGAAGCAAGCTATATCTAACTACAATAACTCCTTGAATAAAGCTTACAAGTCCGGTGTGCAAGAGGTGTCTCCTTGCATCACTGCATTTGCTCCTGGACAAGCTGCAGCTTATAAGATGTTTGCGACAATTAACAGAAAGCCAAAGATAGATGCGTATGATACTAATGGGAGGGTATTACAAGATATTCGTGGAGACATAGAACTGAGGGATGTTTGTTTTAGTTATCCCACAAGACTGGATGAGCAAATATTCAATGGATTTTGTCTCTCAATACCTAGTGGTGCAACTGCTGCTTTGGTTGGAGAAAGCGGAAGTGACAGAAAATTGGCCTTGTATGCCAGGAACCAGTTTTGTTTACTGGTAGCATTAAAGATAATATTGCGTTTGGGAAAGGATGGTGCTACTACTGAAGAGGTAGCGACTGCTGCTGAGCTTGCCAATGCTGCAAAATTCATAGCTTTACTGCCTCAGGGAATAGATACACTGGTTGGTGAGCATGGAACTCAACTATCTGCGGGACAAAAGCAAAGAGTTGCTATAGCTAGAGTAATTCTGAAGAACCCAAGAATTTTACTTTTAGATGAAGCCACAAGCGCTCTTGACACTGAATCTGAAAGAGTTGTTCAGGAGGCACTGGACAGAATTATGGTTGACCGGACTACTATCATTGTAGCCCATCGCTTGAGCACTGTAAGGAATGCTGATACCATTGCTGTCATACATCGAGGAACAATTGCTGAGAAAGGACCACATTCTGAGCTAAGCAGGGATCCCGATGGAGCATATAGCAGGCTTATAAGGTTGCAAGAAACTAGTTCTGAGAAATCATCTCCAAGAAGTGGTAGTCGTCACTCATTCTCAATCTCATATGGTAATCCTACTGCAAGCGGTATCCTTGAAACAACAACTGTAGAACCTGATGTTCCTGCTTCAGTAGCATCAGAAGGGCCTCCAGGAGTCTCTCTTCGCCGCCTTGCTTACCTGAACAAGCCAGAGATACCAGTGCTACTTCTAGGTACTATAGTTGCAGCAGTCAATGGCAACTTTCTCTTGTAA

Protein Analysis

492

Amino Acids

53.28

Weight (kDa)

6.69

Isoelectric Point (pI)

38.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 15 - 72 7.2e-10 ABC transporter transmembrane region
ABC_membrane PF00664 94 - 161 2e-07 ABC transporter transmembrane region
ABC_tran PF00005 288 - 339 7.4e-11 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 534, 1220
AccB7I CCANNNNNTGG 1 cut(s) 1262
AciI CCGC 4 cut(s) 732, 938, 1311, 1393
AclWI GGATC 2 cut(s) 1187, 1200
AcsI RAATTY 3 cut(s) 159, 872, 990
AcuI CTGAAG 3 cut(s) 852, 998, 1338
AcyI GRCGYC 1 cut(s) 332
AfaI GTAC 2 cut(s) 31, 1441
AfeI AGCGCT 1 cut(s) 1018
AfiI CCNNNNNNNGG 2 cut(s) 114, 1262
AgsI TTSAA 4 cut(s) 103, 457, 676, 1322
AhlI ACTAGT 1 cut(s) 1235
AjnI CCWGG 3 cut(s) 514, 761, 1375
Alw21I GWGCWC 3 cut(s) 62, 192, 1112
Alw26I GTCTC 6 cut(s) 64, 374, 495, 609, 692, 1387
AlwI GGATC 2 cut(s) 1187, 1200
Aor51HI AGCGCT 1 cut(s) 1018
AoxI GGCC 2 cut(s) 750, 1370
ApoI RAATTY 3 cut(s) 159, 872, 990
AspLEI GCGC 1 cut(s) 1019
AspS9I GGNCC 2 cut(s) 1169, 1370
AsuHPI GGTGA 3 cut(s) 191, 249, 926
AvaII GGWCC 1 cut(s) 1169
AxyI CCTNAGG 1 cut(s) 891
BaeI ACNNNNGTAYC 4 cut(s) 894, 927, 1431, 1464
BamHI GGATCC 1 cut(s) 1192
BbsI GAAGAC 1 cut(s) 110
Bbv12I GWGCWC 3 cut(s) 62, 192, 1112
BbvI GCAGC 9 cut(s) 64, 234, 334, 511, 539, 700, 835, 853, 1463
BccI CCATC 4 cut(s) 242, 812, 1107, 1193
BciT130I CCWGG 3 cut(s) 516, 763, 1377
BciVI GTATCC 1 cut(s) 1325
BclI TGATCA 1 cut(s) 136
BcoDI GTCTC 6 cut(s) 64, 374, 495, 609, 692, 1387
BcuI ACTAGT 1 cut(s) 1235
BfaI CTAG 4 cut(s) 699, 966, 1236, 1436
BfmI CTRYAG 6 cut(s) 5, 78, 525, 960, 1332, 1443
BfoI RGCGCY 1 cut(s) 1020
BfuI GTATCC 1 cut(s) 1325
BlpI GCTNAGC 2 cut(s) 852, 1184
Bme1390I CCNGG 3 cut(s) 516, 763, 1377
Bme18I GGWCC 1 cut(s) 1169
BmgT120I GGNCC 2 cut(s) 1169, 1370
BmiI GGNNCC 2 cut(s) 767, 1194
BmrFI CCNGG 3 cut(s) 516, 763, 1377
BmsI GCATC 4 cut(s) 416, 507, 562, 1370
BpiI GAAGAC 1 cut(s) 110
BpmI CTGGAG 2 cut(s) 84, 1359
Bpu1102I GCTNAGC 2 cut(s) 852, 1184
BpuEI CTTGAG 1 cut(s) 1126
BsaHI GRCGYC 1 cut(s) 332
BsaJI CCNNGG 1 cut(s) 337
BsaWI WCCGGW 2 cut(s) 473, 1077
BsaXI ACNNNNNCTCC 4 cut(s) 354, 384, 434, 464
Bsc4I CCNNNNNNNGG 2 cut(s) 114, 1262
Bse1I ACTGG 7 cut(s) 67, 663, 769, 786, 912, 1062, 1424
Bse21I CCTNAGG 1 cut(s) 891
Bse3DI GCAATG 2 cut(s) 210, 1131
BseBI CCWGG 3 cut(s) 516, 763, 1377
BseDI CCNNGG 1 cut(s) 337
BseGI GGATG 6 cut(s) 60, 177, 253, 637, 667, 823
BseLI CCNNNNNNNGG 2 cut(s) 114, 1262
BseMI GCAATG 2 cut(s) 210, 1131
BseMII CTCAG 7 cut(s) 104, 617, 843, 905, 1152, 1170, 1233
BseNI ACTGG 7 cut(s) 67, 663, 769, 786, 912, 1062, 1424
BseRI GAGGAG 1 cut(s) 392
BseXI GCAGC 9 cut(s) 64, 234, 334, 511, 539, 700, 835, 853, 1463
BshFI GGCC 2 cut(s) 752, 1372
BsiHKAI GWGCWC 3 cut(s) 62, 192, 1112
BsiSI CCGG 2 cut(s) 474, 1078
BslFI GGGAC 2 cut(s) 319, 954
BslI CCNNNNNNNGG 2 cut(s) 114, 1262
BsmAI GTCTC 6 cut(s) 64, 374, 495, 609, 692, 1387
BsmFI GGGAC 2 cut(s) 319, 954
BsmI GAATGC 2 cut(s) 224, 1126
BsnI GGCC 2 cut(s) 752, 1372
Bsp1286I GDGCHC 3 cut(s) 62, 192, 1112
Bsp143I GATC 2 cut(s) 136, 1192
Bsp1720I GCTNAGC 2 cut(s) 852, 1184
Bsp19I CCATGG 1 cut(s) 337
BspACI CCGC 4 cut(s) 732, 938, 1311, 1393
BspANI GGCC 2 cut(s) 752, 1372
BspCNI CTCAG 7 cut(s) 105, 618, 844, 904, 1153, 1171, 1234
BspHI TCATGA 1 cut(s) 306
BspLI GGNNCC 2 cut(s) 767, 1194
BspMAI CTGCAG 3 cut(s) 9, 82, 529
BspPI GGATC 2 cut(s) 1187, 1200
BsrDI GCAATG 2 cut(s) 210, 1131
BsrI ACTGG 7 cut(s) 67, 663, 769, 786, 912, 1062, 1424
BssECI CCNNGG 1 cut(s) 337
BssMI GATC 2 cut(s) 136, 1192
BssNI GRCGYC 1 cut(s) 332
BssT1I CCWWGG 1 cut(s) 337
Bst2UI CCWGG 3 cut(s) 516, 763, 1377
Bst4CI ACNGT 4 cut(s) 187, 403, 1114, 1333
Bst6I CTCTTC 2 cut(s) 828, 1392
BstACI GRCGYC 1 cut(s) 332
BstAPI GCANNNNNTGC 1 cut(s) 713
BstC8I GCNNGC 4 cut(s) 429, 858, 1214, 1309
BstDEI CTNAG 8 cut(s) 113, 626, 852, 891, 1161, 1179, 1184, 1242
BstDSI CCRYGG 1 cut(s) 337
BstF5I GGATG 6 cut(s) 60, 177, 253, 637, 667, 823
BstH2I RGCGCY 1 cut(s) 1020
BstHHI GCGC 1 cut(s) 1019
BstKTI GATC 2 cut(s) 139, 1195
BstMAI GTCTC 6 cut(s) 64, 374, 495, 609, 692, 1387
BstMBI GATC 2 cut(s) 136, 1192
BstMWI GCNNNNNNNGC 8 cut(s) 57, 713, 758, 848, 857, 866, 1016, 1358
BstNI CCWGG 3 cut(s) 516, 763, 1377
BstSCI CCNGG 3 cut(s) 514, 761, 1375
BstSFI CTRYAG 6 cut(s) 5, 78, 525, 960, 1332, 1443
BstV1I GCAGC 9 cut(s) 64, 234, 334, 511, 539, 700, 835, 853, 1463
BstV2I GAAGAC 1 cut(s) 110
BstX2I RGATCY 1 cut(s) 1192
BstXI CCANNNNNNTGG 1 cut(s) 658
BstYI RGATCY 1 cut(s) 1192
Bsu36I CCTNAGG 1 cut(s) 891
BsuI GTATCC 1 cut(s) 1325
BsuRI GGCC 2 cut(s) 752, 1372
BtgI CCRYGG 1 cut(s) 337
BtgZI GCGATG 1 cut(s) 1085
BtsCI GGATG 6 cut(s) 60, 177, 253, 637, 667, 823
BtsI GCAGTG 1 cut(s) 501
BtsIMutI CAGTG 7 cut(s) 60, 501, 905, 1026, 1055, 1110, 1431
Cac8I GCNNGC 4 cut(s) 429, 858, 1214, 1309
CciI TCATGA 1 cut(s) 306
CfoI GCGC 1 cut(s) 1019
Cfr13I GGNCC 2 cut(s) 1169, 1370
CseI GACGC 1 cut(s) 321
Csp6I GTAC 2 cut(s) 30, 1440
CviAII CATG 5 cut(s) 48, 267, 307, 338, 920
CviQI GTAC 2 cut(s) 30, 1440
DdeI CTNAG 8 cut(s) 113, 626, 852, 891, 1161, 1179, 1184, 1242
DpnI GATC 2 cut(s) 138, 1194
DpnII GATC 2 cut(s) 136, 1192
Eam1104I CTCTTC 2 cut(s) 828, 1392
EarI CTCTTC 2 cut(s) 828, 1392
Eco130I CCWWGG 1 cut(s) 337
Eco47I GGWCC 1 cut(s) 1169
Eco47III AGCGCT 1 cut(s) 1018
Eco57I CTGAAG 3 cut(s) 852, 998, 1338
Eco81I CCTNAGG 1 cut(s) 891
EcoO109I RGGNCCY 1 cut(s) 1370
EcoRII CCWGG 3 cut(s) 514, 761, 1375
EcoT14I CCWWGG 1 cut(s) 337
ErhI CCWWGG 1 cut(s) 337
FaeI CATG 5 cut(s) 51, 270, 310, 341, 923
FaqI GGGAC 2 cut(s) 319, 954
FatI CATG 5 cut(s) 47, 266, 306, 337, 919
FauI CCCGC 1 cut(s) 931
FauNDI CATATG 1 cut(s) 1291
FbaI TGATCA 1 cut(s) 136
FokI GGATG 6 cut(s) 67, 184, 260, 644, 674, 830
FspBI CTAG 4 cut(s) 699, 966, 1236, 1436
GlaI GCGC 1 cut(s) 1018
GsuI CTGGAG 2 cut(s) 84, 1359
HaeII RGCGCY 1 cut(s) 1020
HaeIII GGCC 2 cut(s) 752, 1372
HapII CCGG 2 cut(s) 474, 1078
HgaI GACGC 1 cut(s) 321
HhaI GCGC 1 cut(s) 1019
Hin1I GRCGYC 1 cut(s) 332
Hin1II CATG 5 cut(s) 51, 270, 310, 341, 923
Hin6I GCGC 1 cut(s) 1017
HinP1I GCGC 1 cut(s) 1017
HincII GTYRAC 1 cut(s) 1075
HindII GTYRAC 1 cut(s) 1075
HindIII AAGCTT 1 cut(s) 462
HinfI GANTC 2 cut(s) 1031, 1380
HpaII CCGG 2 cut(s) 474, 1078
HphI GGTGA 3 cut(s) 191, 249, 926
Hpy166II GTNNAC 3 cut(s) 414, 779, 1075
Hpy188I TCNGA 7 cut(s) 358, 398, 978, 1036, 1180, 1243, 1366
Hpy188III TCNNGA 6 cut(s) 40, 140, 307, 1022, 1049, 1196
Hpy8I GTNNAC 3 cut(s) 414, 779, 1075
HpyAV CCTTC 3 cut(s) 208, 353, 1361
HpyCH4III ACNGT 4 cut(s) 187, 403, 1114, 1333
HpyF10VI GCNNNNNNNGC 8 cut(s) 57, 713, 758, 848, 857, 866, 1016, 1358
HpyF3I CTNAG 8 cut(s) 113, 626, 852, 891, 1161, 1179, 1184, 1242
Hsp92I GRCGYC 1 cut(s) 332
Hsp92II CATG 5 cut(s) 51, 270, 310, 341, 923
HspAI GCGC 1 cut(s) 1017
Ksp22I TGATCA 1 cut(s) 136
Kzo9I GATC 2 cut(s) 136, 1192
LmnI GCTCC 3 cut(s) 362, 517, 1202
Lsp1109I GCAGC 9 cut(s) 64, 234, 334, 511, 539, 700, 835, 853, 1463
LweI GCATC 4 cut(s) 416, 507, 562, 1370
MaeI CTAG 4 cut(s) 699, 966, 1236, 1436
MaeIII GTNAC 2 cut(s) 737, 1271
MalI GATC 2 cut(s) 138, 1194
MboI GATC 2 cut(s) 136, 1192
MboII GAAGA 5 cut(s) 17, 115, 845, 991, 1379
MfeI CAATTG 4 cut(s) 14, 366, 384, 1155
MflI RGATCY 1 cut(s) 1192
MhlI GDGCHC 3 cut(s) 62, 192, 1112
MlyI GAGTC 1 cut(s) 1389
MmeI TCCRAC 1 cut(s) 703
MseI TTAA 4 cut(s) 195, 242, 552, 791
MspI CCGG 2 cut(s) 474, 1078
MspR9I CCNGG 3 cut(s) 516, 763, 1377
MunI CAATTG 4 cut(s) 14, 366, 384, 1155
Mva1269I GAATGC 2 cut(s) 224, 1126
MvaI CCWGG 3 cut(s) 516, 763, 1377
MwoI GCNNNNNNNGC 8 cut(s) 57, 713, 758, 848, 857, 866, 1016, 1358
NcoI CCATGG 1 cut(s) 337
NdeI CATATG 1 cut(s) 1291
NdeII GATC 2 cut(s) 136, 1192
NlaIII CATG 5 cut(s) 51, 270, 310, 341, 923
NlaIV GGNNCC 2 cut(s) 767, 1194
NmuCI GTSAC 2 cut(s) 737, 1271
PagI TCATGA 1 cut(s) 306
PctI GAATGC 2 cut(s) 224, 1126
PfeI GAWTC 1 cut(s) 1031
PflMI CCANNNNNTGG 1 cut(s) 1262
PfoI TCCNGGA 2 cut(s) 514, 1375
PleI GAGTC 1 cut(s) 1388
PpsI GAGTC 1 cut(s) 1388
PsiI TTATAA 2 cut(s) 534, 1220
Psp6I CCWGG 3 cut(s) 514, 761, 1375
PspGI CCWGG 3 cut(s) 514, 761, 1375
PspN4I GGNNCC 2 cut(s) 767, 1194
PspPI GGNCC 2 cut(s) 1169, 1370
PstI CTGCAG 3 cut(s) 9, 82, 529
PsuI RGATCY 1 cut(s) 1192
RsaI GTAC 2 cut(s) 31, 1441
RsaNI GTAC 2 cut(s) 30, 1440
SaqAI TTAA 4 cut(s) 195, 242, 552, 791
Sau3AI GATC 2 cut(s) 136, 1192
Sau96I GGNCC 2 cut(s) 1169, 1370
SchI GAGTC 1 cut(s) 1389
ScrFI CCNGG 3 cut(s) 516, 763, 1377
SduI GDGCHC 3 cut(s) 62, 192, 1112
SfaNI GCATC 4 cut(s) 416, 507, 562, 1370
SfcI CTRYAG 6 cut(s) 5, 78, 525, 960, 1332, 1443
SinI GGWCC 1 cut(s) 1169
SmlI CTYRAG 1 cut(s) 1105
SmoI CTYRAG 1 cut(s) 1105
SpeI ACTAGT 1 cut(s) 1235
SsiI CCGC 4 cut(s) 732, 938, 1311, 1393
SspI AATATT 2 cut(s) 672, 801
SspMI CTAG 4 cut(s) 699, 966, 1236, 1436
StyD4I CCNGG 3 cut(s) 514, 761, 1375
StyI CCWWGG 1 cut(s) 337
TaaI ACNGT 4 cut(s) 187, 403, 1114, 1333
TaqI TCGA 2 cut(s) 39, 1147
TauI GCSGC 1 cut(s) 1395
TfiI GAWTC 1 cut(s) 1031
Tru1I TTAA 4 cut(s) 195, 242, 552, 791
Tru9I TTAA 4 cut(s) 195, 242, 552, 791
TscAI CASTG 7 cut(s) 67, 508, 912, 1033, 1062, 1117, 1431
TseFI GTSAC 2 cut(s) 737, 1271
Tsp45I GTSAC 2 cut(s) 737, 1271
TspDTI ATGAA 3 cut(s) 307, 865, 1020
TspRI CASTG 7 cut(s) 67, 508, 912, 1033, 1062, 1117, 1431
Van91I CCANNNNNTGG 1 cut(s) 1262
VpaK11BI GGWCC 1 cut(s) 1169
XapI RAATTY 3 cut(s) 159, 872, 990
XspI CTAG 4 cut(s) 699, 966, 1236, 1436
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.