Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0000116

Physical Location & Seq

Genomic Coordinates Reverse (-)

8326085 .. 8328538

Gene Structure 2454 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g11930.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1470 bp

ATGGAAGCAAGTTGGTTTGACGATCCTGAGCACTCGAGTGGTGCAATTGGTGCAAGGCTTTCTGCAGATGCAGCTTCTCTGCGAGGGCTGGTTGGAGATGCTCTAGCTTTGGTTGTTGGGAATCTAGCAATGGCAATTGCTGGTTTGGTGATTGCTTTTGTGGCAAATTGGCAACTCGCTCTTATAATCCTCGTTCTGCTTCCGCTGTTAGGAGTAACTGGTTACGTTCAAGTCAAGTTCATGACAGGATTCAGTGCAGATGCAAAGAAAATGTACGAGGAGGCAAGTCAAGTAGCGACTGATGCTGTAGGGAGTATTAGAACAATTGCTTCCTTCTGTGCTGAAGAGAAGGTGATGGAGTTATACCAGAGAAAATGTGAAGGCCCAATTAAGACAGGGATAAGACGAGGGTTAATCAGTGGGATAGGATTTGGGCTATCATTCTTTTTTCTTTTTTCTGTGTACGCGTGTAGTTTTTATGCTGGTGCCCGACTAGTTGCAGCAGGCAAGACGACATTCTCTGATGTTTTCCGGGTTTTCTTTGCTCTCACTATAACAGCTGTTGGAGTGTCTCAGTCTGGATCCCTAGCCCCTGATGTAAGTAAAGTAAAATGCTCTGCTGCTTCCATATTTGCAATTCTCGACCGGAAATCAAAGATAGACTCCAGTGATGACTCAGGAAAAACTATAGAAAATGTTAAGGGAGAAATTGAATTTCGACATGTGAGTTTCAAGTATCCAACCAGACCTGACGTTCAAATTTTTGAGGATCTTTGCTTGACCATCCATCCTGGCAAGACAGTTGCTCTGGTGGGAGAAAGCGGAAGTGGGAAATCAACAGTCGTCTCCTTGTTGCAGAGATTTTATGATCCTGATTCAGGTTACATTACACTAGATGGAATGGAAATCCAAAAGCTACAGTTAAAGTGGTTGAGACAGCAAATGGGGCTGGTGAGCCAGGAGCCTGTATTGTTTAATGACACAATCCGAGCCAACATTGCATATGGAAAGGAAGGGGATGCAACAGAAGCTGAAATTATAGCTGCAGCAGAATTGGCAAACGCTCACAAATTCATCAGTAGTTTGCAACAGGGTTATGATACAACCGTAGGAGAGCGGGGTGTTCGGTTGTCCGGTGGACAGAAGCAAAGGGTGGCAATTGCAAGAGCCATAATGAAGGCCCCAAAGATTTTACTACTAGATGAAGCCACAAGTGCGCTTGATGCTGAATCCGAACGCGTTGTTCAAGATGCATTGGATCGTGTCATGGTGGATCGAACCACGGTGGTGATTGCTCATCGGTTATCCACGATCAGGAGTGCAGATTTAATAGCCGTGGTGAAAAATGGAGTGATTGCAGAGAAAGGAAAGCATGAAACTTTGCTCAATGTCGAGGATGGCATTTATGCTTCTTTGGTAGCACTCCATGCAGTGCCTCATCGTAGAGAGCTTTGCAAAGAGGTAAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0008150 GO:0009506 GO:0009914 GO:0009926 GO:0009966 GO:0010315 GO:0010329 GO:0010540 GO:0010646 GO:0010817 GO:0010928 GO:0015562 GO:0016020 GO:0022857 GO:0023051 GO:0030054 GO:0044464 GO:0048583 GO:0050789 GO:0050794 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0060918 GO:0065007 GO:0065008 GO:0071944 GO:0080161

KEGG Pathways

Metabolic & Signaling

ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

490

Amino Acids

52.71

Weight (kDa)

6.29

Isoelectric Point (pI)

31.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000116)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca	FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica	MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica	Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis	pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis	RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata	RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora	Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii	Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa	Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha	Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana	Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	185
AccB1I	GGYRCC	1 cut(s)	485
AccBSI	CCGCTC	1 cut(s)	1117
AccII	CGCG	2 cut(s)	467, 1239
AciI	CCGC	3 cut(s)	203, 822, 1117
AclWI	GGATC	7 cut(s)	17, 576, 589, 777, 863, 1266, 1281
AcsI	RAATTY	3 cut(s)	713, 759, 1070
AcuI	CTGAAG	1 cut(s)	363
AfaI	GTAC	2 cut(s)	275, 464
AfiI	CCNNNNNNNGG	3 cut(s)	209, 878, 1314
AflIII	ACRYGT	3 cut(s)	465, 721, 1237
AgsI	TTSAA	5 cut(s)	230, 713, 733, 758, 1247
AhlI	ACTAGT	1 cut(s)	493
AjnI	CCWGG	2 cut(s)	790, 957
AleI	CACNNNNGTG	2 cut(s)	36, 1286
AluBI	AGCT	7 cut(s)	74, 107, 560, 916, 1031, 1043, 1450
AluI	AGCT	7 cut(s)	74, 107, 560, 916, 1031, 1043, 1450
Alw21I	GWGCWC	1 cut(s)	33
Alw26I	GTCTC	3 cut(s)	576, 850, 928
AlwI	GGATC	7 cut(s)	17, 576, 589, 777, 863, 1266, 1281
AlwNI	CAGNNNCTG	1 cut(s)	1031
Ama87I	CYCGRG	1 cut(s)	34
AoxI	GGCC	2 cut(s)	382, 1179
ApeKI	GCWGC	5 cut(s)	71, 500, 620, 1043, 1046
ApoI	RAATTY	3 cut(s)	713, 759, 1070
AspLEI	GCGC	1 cut(s)	1219
AspS9I	GGNCC	2 cut(s)	383, 1180
AsuC2I	CCSGG	1 cut(s)	533
AsuHPI	GGTGA	5 cut(s)	160, 364, 964, 1300, 1351
AvaI	CYCGRG	1 cut(s)	34
BaeGI	GKGCMC	1 cut(s)	490
BaeI	ACNNNNGTAYC	2 cut(s)	1092, 1125
BamHI	GGATCC	1 cut(s)	581
BanI	GGYRCC	1 cut(s)	485
Bbv12I	GWGCWC	1 cut(s)	33
BbvI	GCAGC	5 cut(s)	83, 512, 607, 1030, 1058
BccI	CCATC	5 cut(s)	349, 791, 795, 890, 1391
BceAI	ACGGC	1 cut(s)	1319
BciT130I	CCWGG	2 cut(s)	792, 959
BciVI	GTATCC	1 cut(s)	747
BcnI	CCSGG	1 cut(s)	533
BcoDI	GTCTC	3 cut(s)	576, 850, 928
BcuI	ACTAGT	1 cut(s)	493
BfaI	CTAG	6 cut(s)	104, 125, 494, 587, 893, 1199
BfmI	CTRYAG	5 cut(s)	63, 306, 687, 917, 1044
BfuI	GTATCC	1 cut(s)	747
BisI	GCNGC	5 cut(s)	72, 501, 621, 1044, 1047
BlsI	GCNGC	5 cut(s)	73, 502, 622, 1045, 1048
Bme1390I	CCNGG	3 cut(s)	533, 792, 959
BmeT110I	CYCGRG	1 cut(s)	34
BmgT120I	GGNCC	2 cut(s)	383, 1180
BmiI	GGNNCC	4 cut(s)	487, 583, 963, 1182
BmrFI	CCNGG	3 cut(s)	533, 792, 959
BmsI	GCATC	7 cut(s)	58, 88, 250, 292, 1009, 1213, 1240
BpmI	CTGGAG	1 cut(s)	649
Bpu10I	CCTNAGC	1 cut(s)	27
BpuMI	CCSGG	1 cut(s)	533
BsaJI	CCNNGG	2 cut(s)	1281, 1335
BsaWI	WCCGGW	2 cut(s)	645, 1133
Bsc4I	CCNNNNNNNGG	3 cut(s)	209, 878, 1314
Bse1I	ACTGG	2 cut(s)	223, 666
Bse3DI	GCAATG	2 cut(s)	135, 996
BseBI	CCWGG	2 cut(s)	792, 959
BseDI	CCNNGG	2 cut(s)	1281, 1335
BseGI	GGATG	4 cut(s)	783, 787, 1024, 1402
BseLI	CCNNNNNNNGG	3 cut(s)	209, 878, 1314
BseMI	GCAATG	2 cut(s)	135, 996
BseMII	CTCAG	3 cut(s)	18, 587, 690
BseNI	ACTGG	2 cut(s)	223, 666
BseRI	GAGGAG	1 cut(s)	293
BseSI	GKGCMC	1 cut(s)	490
BseXI	GCAGC	5 cut(s)	83, 512, 607, 1030, 1058
BsgI	GTGCAG	2 cut(s)	276, 1341
Bsh1236I	CGCG	2 cut(s)	467, 1239
Bsh1285I	CGRYCG	1 cut(s)	646
BshFI	GGCC	2 cut(s)	384, 1181
BshNI	GGYRCC	1 cut(s)	485
BsiEI	CGRYCG	1 cut(s)	646
BsiHKAI	GWGCWC	1 cut(s)	33
BsiHKCI	CYCGRG	1 cut(s)	34
BsiSI	CCGG	3 cut(s)	532, 646, 1134
BslI	CCNNNNNNNGG	3 cut(s)	209, 878, 1314
BsmAI	GTCTC	3 cut(s)	576, 850, 928
BsmBI	CGTCTC	1 cut(s)	850
BsnI	GGCC	2 cut(s)	384, 1181
BsoBI	CYCGRG	1 cut(s)	34
Bsp1286I	GDGCHC	2 cut(s)	33, 490
Bsp143I	GATC	7 cut(s)	22, 581, 769, 868, 1258, 1273, 1311
BspACI	CCGC	3 cut(s)	203, 822, 1117
BspANI	GGCC	2 cut(s)	384, 1181
BspCNI	CTCAG	3 cut(s)	19, 586, 689
BspFNI	CGCG	2 cut(s)	467, 1239
BspHI	TCATGA	1 cut(s)	240
BspLI	GGNNCC	4 cut(s)	487, 583, 963, 1182
BspMAI	CTGCAG	2 cut(s)	67, 1048
BspPI	GGATC	7 cut(s)	17, 576, 589, 777, 863, 1266, 1281
BspT107I	GGYRCC	1 cut(s)	485
BsrBI	CCGCTC	1 cut(s)	1117
BsrDI	GCAATG	2 cut(s)	135, 996
BsrI	ACTGG	2 cut(s)	223, 666
BssECI	CCNNGG	2 cut(s)	1281, 1335
BssMI	GATC	7 cut(s)	22, 581, 769, 868, 1258, 1273, 1311
Bst2UI	CCWGG	2 cut(s)	792, 959
Bst4CI	ACNGT	5 cut(s)	802, 841, 921, 1108, 1285
Bst6I	CTCTTC	1 cut(s)	339
BstAPI	GCANNNNNTGC	2 cut(s)	50, 1427
BstC8I	GCNNGC	1 cut(s)	505
BstDEI	CTNAG	3 cut(s)	27, 573, 676
BstDSI	CCRYGG	2 cut(s)	1281, 1335
BstENI	CCTNNNNNAGG	1 cut(s)	876
BstF5I	GGATG	4 cut(s)	783, 787, 1024, 1402
BstFNI	CGCG	2 cut(s)	467, 1239
BstHHI	GCGC	1 cut(s)	1219
BstKTI	GATC	7 cut(s)	25, 584, 772, 871, 1261, 1276, 1314
BstMAI	GTCTC	3 cut(s)	576, 850, 928
BstMBI	GATC	7 cut(s)	22, 581, 769, 868, 1258, 1273, 1311
BstMCI	CGRYCG	1 cut(s)	646
BstNI	CCWGG	2 cut(s)	792, 959
BstNSI	RCATGY	1 cut(s)	725
BstSCI	CCNGG	3 cut(s)	531, 790, 957
BstSFI	CTRYAG	5 cut(s)	63, 306, 687, 917, 1044
BstSLI	GKGCMC	1 cut(s)	490
BstUI	CGCG	2 cut(s)	467, 1239
BstV1I	GCAGC	5 cut(s)	83, 512, 607, 1030, 1058
BstX2I	RGATCY	2 cut(s)	581, 769
BstYI	RGATCY	2 cut(s)	581, 769
BsuI	GTATCC	1 cut(s)	747
BsuRI	GGCC	2 cut(s)	384, 1181
BtgI	CCRYGG	2 cut(s)	1281, 1335
BtsCI	GGATG	4 cut(s)	783, 787, 1024, 1402
BtsI	GCAGTG	1 cut(s)	1437
BtsIMutI	CAGTG	4 cut(s)	259, 424, 673, 1437
Cac8I	GCNNGC	1 cut(s)	505
CaiI	CAGNNNCTG	1 cut(s)	1031
CciI	TCATGA	1 cut(s)	240
CfoI	GCGC	1 cut(s)	1219
Cfr13I	GGNCC	2 cut(s)	383, 1180
Csp6I	GTAC	2 cut(s)	274, 463
CviAII	CATG	5 cut(s)	241, 722, 1267, 1373, 1427
CviQI	GTAC	2 cut(s)	274, 463
DdeI	CTNAG	3 cut(s)	27, 573, 676
DpnI	GATC	7 cut(s)	24, 583, 771, 870, 1260, 1275, 1313
DpnII	GATC	7 cut(s)	22, 581, 769, 868, 1258, 1273, 1311
Eam1104I	CTCTTC	1 cut(s)	339
EarI	CTCTTC	1 cut(s)	339
Eco57I	CTGAAG	1 cut(s)	363
Eco88I	CYCGRG	1 cut(s)	34
EcoNI	CCTNNNNNAGG	1 cut(s)	876
EcoO109I	RGGNCCY	1 cut(s)	1180
EcoRII	CCWGG	2 cut(s)	790, 957
EcoT22I	ATGCAT	1 cut(s)	1255
Esp3I	CGTCTC	1 cut(s)	850
FaeI	CATG	5 cut(s)	244, 725, 1270, 1376, 1430
FatI	CATG	5 cut(s)	240, 721, 1266, 1372, 1426
FauI	CCCGC	1 cut(s)	1110
FauNDI	CATATG	1 cut(s)	1003
Fnu4HI	GCNGC	5 cut(s)	72, 501, 621, 1044, 1047
FokI	GGATG	4 cut(s)	770, 774, 1031, 1409
Fsp4HI	GCNGC	5 cut(s)	72, 501, 621, 1044, 1047
FspBI	CTAG	6 cut(s)	104, 125, 494, 587, 893, 1199
GlaI	GCGC	1 cut(s)	1218
GluI	GCNGC	5 cut(s)	72, 501, 621, 1044, 1047
GsuI	CTGGAG	1 cut(s)	649
HaeIII	GGCC	2 cut(s)	384, 1181
HapII	CCGG	3 cut(s)	532, 646, 1134
HhaI	GCGC	1 cut(s)	1219
Hin1II	CATG	5 cut(s)	244, 725, 1270, 1376, 1430
Hin6I	GCGC	1 cut(s)	1217
HinP1I	GCGC	1 cut(s)	1217
HinfI	GANTC	6 cut(s)	121, 249, 662, 674, 875, 1229
HpaII	CCGG	3 cut(s)	532, 646, 1134
HphI	GGTGA	5 cut(s)	160, 364, 964, 1300, 1351
Hpy166II	GTNNAC	2 cut(s)	463, 1139
Hpy188I	TCNGA	3 cut(s)	523, 989, 1234
Hpy188III	TCNNGA	8 cut(s)	26, 241, 579, 641, 678, 872, 1247, 1315
Hpy8I	GTNNAC	2 cut(s)	463, 1139
HpyAV	CCTTC	5 cut(s)	343, 343, 374, 1007, 1171
HpyCH4III	ACNGT	5 cut(s)	802, 841, 921, 1108, 1285
HpyCH4IV	ACGT	2 cut(s)	225, 753
HpyF3I	CTNAG	3 cut(s)	27, 573, 676
HpySE526I	ACGT	2 cut(s)	225, 753
Hsp92II	CATG	5 cut(s)	244, 725, 1270, 1376, 1430
HspAI	GCGC	1 cut(s)	1217
Kzo9I	GATC	7 cut(s)	22, 581, 769, 868, 1258, 1273, 1311
LmnI	GCTCC	1 cut(s)	961
Lsp1109I	GCAGC	5 cut(s)	83, 512, 607, 1030, 1058
LweI	GCATC	7 cut(s)	58, 88, 250, 292, 1009, 1213, 1240
MaeI	CTAG	6 cut(s)	104, 125, 494, 587, 893, 1199
MaeII	ACGT	2 cut(s)	225, 753
MaeIII	GTNAC	3 cut(s)	214, 221, 881
MalI	GATC	7 cut(s)	24, 583, 771, 870, 1260, 1275, 1313
MbiI	CCGCTC	1 cut(s)	1117
MboI	GATC	7 cut(s)	22, 581, 769, 868, 1258, 1273, 1311
MboII	GAAGA	1 cut(s)	356
MfeI	CAATTG	4 cut(s)	45, 135, 324, 1158
MflI	RGATCY	2 cut(s)	581, 769
MhlI	GDGCHC	2 cut(s)	33, 490
MluI	ACGCGT	2 cut(s)	465, 1237
MlyI	GAGTC	2 cut(s)	656, 668
MmeI	TCCRAC	3 cut(s)	73, 544, 764
MnlI	CCTC	9 cut(s)	77, 200, 271, 274, 401, 760, 1387, 1446, 1453
Mph1103I	ATGCAT	1 cut(s)	1255
MseI	TTAA	6 cut(s)	390, 413, 699, 923, 975, 1328
MslI	CAYNNNNRTG	2 cut(s)	36, 1286
MspA1I	CMGCKG	2 cut(s)	205, 560
MspI	CCGG	3 cut(s)	532, 646, 1134
MspR9I	CCNGG	3 cut(s)	533, 792, 959
MunI	CAATTG	4 cut(s)	45, 135, 324, 1158
MvaI	CCWGG	2 cut(s)	792, 959
MvnI	CGCG	2 cut(s)	467, 1239
NciI	CCSGG	1 cut(s)	533
NdeI	CATATG	1 cut(s)	1003
NdeII	GATC	7 cut(s)	22, 581, 769, 868, 1258, 1273, 1311
NlaIII	CATG	5 cut(s)	244, 725, 1270, 1376, 1430
NlaIV	GGNNCC	4 cut(s)	487, 583, 963, 1182
NsiI	ATGCAT	1 cut(s)	1255
NspI	RCATGY	1 cut(s)	725
OliI	CACNNNNGTG	2 cut(s)	36, 1286
PaeR7I	CTCGAG	1 cut(s)	34
PagI	TCATGA	1 cut(s)	240
PciI	ACATGT	1 cut(s)	721
PfeI	GAWTC	4 cut(s)	121, 249, 875, 1229
PkrI	GCNGC	5 cut(s)	73, 502, 622, 1045, 1048
PleI	GAGTC	2 cut(s)	656, 668
PpsI	GAGTC	2 cut(s)	656, 668
PscI	ACATGT	1 cut(s)	721
PsiI	TTATAA	1 cut(s)	185
Psp6I	CCWGG	2 cut(s)	790, 957
PspGI	CCWGG	2 cut(s)	790, 957
PspN4I	GGNNCC	4 cut(s)	487, 583, 963, 1182
PspPI	GGNCC	2 cut(s)	383, 1180
PspXI	VCTCGAGB	1 cut(s)	34
PstI	CTGCAG	2 cut(s)	67, 1048
PstNI	CAGNNNCTG	1 cut(s)	1031
PsuI	RGATCY	2 cut(s)	581, 769
PvuII	CAGCTG	1 cut(s)	560
RsaI	GTAC	2 cut(s)	275, 464
RsaNI	GTAC	2 cut(s)	274, 463
RseI	CAYNNNNRTG	2 cut(s)	36, 1286
SaqAI	TTAA	6 cut(s)	390, 413, 699, 923, 975, 1328
SatI	GCNGC	5 cut(s)	72, 501, 621, 1044, 1047
Sau3AI	GATC	7 cut(s)	22, 581, 769, 868, 1258, 1273, 1311
Sau96I	GGNCC	2 cut(s)	383, 1180
SchI	GAGTC	2 cut(s)	656, 668
ScrFI	CCNGG	3 cut(s)	533, 792, 959
SduI	GDGCHC	2 cut(s)	33, 490
SfaNI	GCATC	7 cut(s)	58, 88, 250, 292, 1009, 1213, 1240
SfcI	CTRYAG	5 cut(s)	63, 306, 687, 917, 1044
Sfr274I	CTCGAG	1 cut(s)	34
SlaI	CTCGAG	1 cut(s)	34
SmiMI	CAYNNNNRTG	2 cut(s)	36, 1286
SmlI	CTYRAG	1 cut(s)	34
SmoI	CTYRAG	1 cut(s)	34
SpeI	ACTAGT	1 cut(s)	493
SsiI	CCGC	3 cut(s)	203, 822, 1117
SspMI	CTAG	6 cut(s)	104, 125, 494, 587, 893, 1199
StyD4I	CCNGG	3 cut(s)	531, 790, 957
TaaI	ACNGT	5 cut(s)	802, 841, 921, 1108, 1285
TaiI	ACGT	2 cut(s)	228, 756
TaqI	TCGA	5 cut(s)	35, 642, 718, 1276, 1392
TfiI	GAWTC	4 cut(s)	121, 249, 875, 1229
Tru1I	TTAA	6 cut(s)	390, 413, 699, 923, 975, 1328
Tru9I	TTAA	6 cut(s)	390, 413, 699, 923, 975, 1328
TscAI	CASTG	4 cut(s)	259, 424, 673, 1437
TseI	GCWGC	5 cut(s)	71, 500, 620, 1043, 1046
TspDTI	ATGAA	5 cut(s)	229, 1063, 1190, 1218, 1389
TspRI	CASTG	4 cut(s)	259, 424, 673, 1437
XagI	CCTNNNNNAGG	1 cut(s)	876
XapI	RAATTY	3 cut(s)	713, 759, 1070
XceI	RCATGY	1 cut(s)	725
XhoI	CTCGAG	1 cut(s)	34
XspI	CTAG	6 cut(s)	104, 125, 494, 587, 893, 1199
Zsp2I	ATGCAT	1 cut(s)	1255

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.