FvH4_4g21380

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
24425249 .. 24438135
12887 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g21380.t4

Sequence Viewer

Length: 3879 bp
ATGGCTGATGATCACGAAAACCAGTTGGGTAACGGAAATGTAGCCACAGAGCCAGCAGAAACAGCATCAGCAAACGCAGGAGAATTCAAGAACACCCAATTAGAAGATACTTCTGGCAATAAGAGCAAGGAGGAGGAAGCAACCAACACAGTACCATACTACAAGCTTTTCTCATTTGCTGATTCCACGGATTACATGTTAATGTCTTTTGGTACGATCGGCGCAATTGGAAATGGAATGTGTCTGCCTCTAATGACAGTGATCATGGGAGAAGTGATTAACTCCTTTGGAGACTCTACGGATACCAAAGCTGTGGTTCATCTTGTTTCCAAGGTAGCGCTAAAGTTCATTTACTTGGCTATAGGGGCAGCTGCTGCTGCATTTTTACAAATGTCTTGTTGGATGATCACTGGAGAGAGACAGGCTGCACGAATAAGAAGTTTATATTTGAAAACAATATTGCGGCAAGATGTTGGTTATTTTGATAAAGAAGCGAACACTGGGGAAATTGTTGGGAGAATGTCAGGTGATACTGTGCTTATTCAAGAGGCCATGGGGGAGAAGGTAGGAACTTTTATCCAGTTATTTGCAACATTTATAGGAGGCTTTGTCATAGCATTTGCCAAGGGATGGCTTCTCACCCTTGTCATGCTCACCTCTCTTCCCCCTCTTGTCTTTTCTGGTGCTGTCATGAGTCTCACTATAAGGAAGTTGGCATCCCGCGGACAAGCTGCTTATTCGGTTGGAGCAAGTGTGGTAGAGCAGACAATCGGTTCAATCAAAACTGTTGCTTCATTTACGGGGGAGAAGCAAGCTATAACAAAGTACAACAACTCCTTGACTAAAGCTTACAACTCTGGTGTGCAAGAGGGTTTAGCATCAGGGGTGGGTCTTGGTACGGTTATTTTTACTATATTCTGCAGTTATGGATTGGCTATCTGGTATGGCGGCAAAATGATACTTGAAAAGGGTTACAATGGAGGAGATGTCATTAATGTGATTTTTGCTGTCTTGACTGGCTCTTTCTCTCTGGGGCAAGCATCTCCATGCGTGAGTGCATTTTCCGCTGGACAAGCTGCTGCTTATAAGATGTTCGAGACAATTAACAGAAAGCCAACTATAGATGTGTATGACACCAGAGGACTAAAAGCAGAAGAGATCCGTGGAGATATTGAACTGAGGGATGTTTATTTTAGTTATCCAGCAAGACCAGATGAGCAAATATTCACTGGATTCTCTCTCTCAATACCTAGTGGTGCAACTGCTGCTTTAGTTGGACAAAGTGGAAGTGGTAAATCAACTGTCATCAGTTTGATTGAAAGATTTTATGACCCCCAAGCTGGTGAAATTCTTATTGATGGGATTAATCTTAAGGAGTTCCAACTGAAATGGATCAGAGAGAAAATAGGCCTTGTTAGCCAGGAACCAGTTTTGTTTAGTGGCAGCATTAAAGATAATATTGCCTATGGAAAAGATGGTGCAACAATTGAAGAAATGAGGGCTGCTGCTGAGCTGGCCAATGCTGCAAAATTCATAGACAAACTACCTCAGGGACTAGATACAATGGTTGGTGAGCATGGAACTCAGCTATCTGGGGGCCAAAAGCAGAGAGTTGCCATAGCAAGAGCAATTCTGAAGAACCCGAGAATTCTACTTTTAGATGAAGCCACAAGCGCTCTTGACTCAGAATCTGAGAGAGTTGTGCAAGAGGCATTAGACAGAATTATGGTTAACAGGACTACTGTCATTGTAGCTCACCGATTGAGCACAGTGAGGAATGCTGATACCATTGCAGTAATACATCGGGGGAGAATTGTTGAAAAAGGACCACATATTGAACTAGTTAAGGATCCAGATGGTGCATATAGCCAACTTATAAGGCTGCAAGAGATTAGTAATGTGTCAGAACATCATGTGAAAAATGATCAGGAAAGGCTAGAGCTTTCCTCAAGTTTTCGGAAACTTTCTTCTTTCAAATCCTTAAGTAGGGAATCAGAAATAGGAAATAGTAGTCGCCATAGTCACTCGTTTTCAATCTCACATGGTGCTCCTACTGTGACTGGTATCCATGAAACAACACCTATTGAACCTGATATTCCAGCTGTATCATCAGAAGTTCATCCAGAAGTCTCACTTAGCCGCTTGGCTTACCTGAACAAGACAGAAATCCCAGTGCTACTTCTAGGTACTATTGCTGCAGCAGTCTGTGGAGTAGTCTTTCCTGTTTTTGGAGTGCTAATATCCAGCGTAATCAAGAGCTTCTTTGATACACCACATCAGCTAAGGAAGGACTCAAAGTTTTGGGCATTAATCTTTGTAGTTATAGGAGTGGTATCGCTCTTGGCGCATCCAATTAGAGCATACTTTTTTGCTGTGGCCGGGTGTAAGTTAATAAGACGAGTACGATCAATGTGCTTTGAGAAAGTTGTTTATATGGAAGCAAGTTGGTTTGATGAAGCTGAGCACTCGAGTGGTGCAATTGGTGCAAGGCTGTCAGGAAATGCAGCTTCTCTTCGAGGGCTGGTTGGTGATGCTCTCAGTTTAGCTGTTATGAATGCATCAACTACAATTGCTGGATTGGTTATTGCTTTTCTGGCAAACTGGCAACTTGCTTTTATCATCCTTGTTATGCTGCCTCTACTAGCAATCAGTGGATATTTTCAAATCGAGGTCATTAAAGGATTAAGTGCAAATGCAAAGAAAATGTACGAAGGTGCAAGCCAAGTAGCCACGGATGCCGTGGGGAGTATTAGAACAATTGCTTCCTTTTGTGCTGAAGAAAAGATTATCAAGTTGTACCAAACAAAATGTGAAGGTCCTATCAAGGCAGGGATAAGGCAAGGTATAGTTAGTGGAATAGGCTTTGGGCTATCATTCTTCTTGCTCTTTTCTGTATATGCATGCAGTTTCTATGCTGGGGCTCGACTTGTTGAAGCAGGCAAGACAACATTCCAGGATGTTTTTCGGGTTTTCTTTGCTCTCACTATGACAGCTATGGCTCTGTCTCAACAAGGTTCCATGGCCCCTGATGCAAGTAAAGGAAAGAGCTCTGCTGCTTCCATATTTGCAATTCTTGACCGAAAATCAAAAATAGATGCAAGTGATGATTCTGGAACAACTATAGAAAATTTGAAGGGAGAAATTGAATTTTCCCATGTTAGTTTCAAGTATCCAAATAGACCTAATGTACCAATCTTCCAGGATCTGTGCTTGGCTATTCGTTATGGGAAGACAGTTGCTCTGGTTGGAGAAAGTGGAAGTGGGAAATCAACAGTGGTCTCACTGCTGCAGAGATTTTACGATCCTGATTCTGGTCACATTACATTAGATGGTACCAAATTGCAAACATTACAGCTGAAGTGGTTGAGGCAGCAAATGGGGCTGGTGAGCCAGGAGCCTATACTTTTCAATGACACCATCCGAGCCAACATTGCATATGGAAAAGAAGGTAATGTAACCGAGGCTGAAATTATAGCAGCAGCAGAATTGGCAAATGCTCACAAGTTCATTAGTAGTTTACAAAAGGGCTATGATACACTAGTAGGAGAGCGAGGGGTCCAACTTTCTGGTGGGCAGAAGCAGAGGGTAGCTATTGCAAGAGCTATAATGAAGGCACCAAAGATATTACTTCTAGATGAAGCCACCAGTGCTCTTGATGCTGAATCCGAAAGAGTGGTTCAAGATGCACTAGATCGAGTTATGGTGAATCGAACTACAGTGGTGGTTGCGCATCGGCTATCCACGATTAAGGGTGCAGATTTAATAGCAGTGGTGAAAAATGGTGTCATTGCAGAGAAAGGAAAGCATGAGACTTTAATCAGTATCAAGGGTGGAACTTATGCTTCTTTAGTTGCACTACATGCAAGTGCCACATCTTAG

Protein Analysis

1293

Amino Acids

139.13

Weight (kDa)

7.31

Isoelectric Point (pI)

30.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 70 - 342 1.7e-58 ABC transporter transmembrane region
ABC_tran PF00005 411 - 558 5.1e-34 ABC transporter
ABC_membrane PF00664 726 - 999 1.4e-55 ABC transporter transmembrane region
ABC_tran PF00005 1079 - 1196 1e-19 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1086, 1877
Acc16I TGCGCA 1 cut(s) 3729
Acc65I GGTACC 1 cut(s) 3332
AccB1I GGYRCC 2 cut(s) 3332, 3613
AccB7I CCANNNNNTGG 1 cut(s) 630
AccII CGCG 1 cut(s) 723
AciI CCGC 6 cut(s) 463, 721, 723, 948, 1065, 2140
AclWI GGATC 6 cut(s) 1153, 1400, 1844, 1857, 3210, 3296
AcoI YGGCCR 2 cut(s) 1515, 2376
AcsI RAATTY 6 cut(s) 83, 1347, 1529, 1647, 3127, 3146
AcuI CTGAAG 3 cut(s) 1655, 2796, 3377
AdeI CACNNNGTG 1 cut(s) 2045
AfeI AGCGCT 2 cut(s) 339, 1675
AfiI CCNNNNNNNGG 5 cut(s) 630, 1340, 1986, 2228, 3311
AflII CTTAAG 2 cut(s) 1370, 1981
AflIII ACRYGT 1 cut(s) 195
AhlI ACTAGT 2 cut(s) 1840, 3538
AjnI CCWGG 4 cut(s) 1419, 2952, 3198, 3390
AleI CACNNNNGTG 1 cut(s) 2469
Alw21I GWGCWC 5 cut(s) 1769, 2050, 2466, 3050, 3652
Alw26I GTCTC 8 cut(s) 285, 412, 701, 1091, 2134, 3009, 3283, 3803
AlwI GGATC 6 cut(s) 1153, 1400, 1844, 1857, 3210, 3296
AlwNI CAGNNNCTG 3 cut(s) 374, 1691, 3205
Ama87I CYCGRG 2 cut(s) 1642, 2467
Aor51HI AGCGCT 2 cut(s) 339, 1675
AoxI GGCC 6 cut(s) 549, 1408, 1515, 1597, 2376, 3021
ApoI RAATTY 6 cut(s) 83, 1347, 1529, 1647, 3127, 3146
AseI ATTAAT 3 cut(s) 993, 1365, 2309
Asp718I GGTACC 1 cut(s) 3332
AspLEI GCGC 5 cut(s) 224, 340, 1676, 2347, 3730
AspS9I GGNCC 5 cut(s) 1597, 1826, 2816, 3022, 3556
AsuC2I CCSGG 1 cut(s) 2380
AvaI CYCGRG 2 cut(s) 1642, 2467
AvaII GGWCC 3 cut(s) 1826, 2816, 3556
AxyI CCTNAGG 1 cut(s) 1548
BaeI ACNNNNGTAYC 4 cut(s) 1551, 1584, 3525, 3558
BalI TGGCCA 1 cut(s) 1517
BamHI GGATCC 1 cut(s) 1849
BanI GGYRCC 2 cut(s) 3332, 3613
BanII GRGCYC 2 cut(s) 2923, 3050
BbsI GAAGAC 1 cut(s) 3236
Bbv12I GWGCWC 5 cut(s) 1769, 2050, 2466, 3050, 3652
BccI CCATC 6 cut(s) 624, 1352, 1469, 1850, 3323, 3425
BceAI ACGGC 1 cut(s) 2723
BcgI CGANNNNNNTGC 2 cut(s) 2394, 2428
BciT130I CCWGG 4 cut(s) 1421, 2954, 3200, 3392
BciVI GTATCC 3 cut(s) 295, 2075, 3180
BclI TGATCA 4 cut(s) 10, 261, 405, 1924
BcnI CCSGG 1 cut(s) 2380
BcoDI GTCTC 8 cut(s) 285, 412, 701, 1091, 2134, 3009, 3283, 3803
BcuI ACTAGT 2 cut(s) 1840, 3538
BfaI CTAG 9 cut(s) 1251, 1556, 1841, 1937, 2183, 2642, 3539, 3632, 3689
BfmI CTRYAG 7 cut(s) 360, 919, 1119, 2196, 3120, 3287, 3714
BfoI RGCGCY 2 cut(s) 341, 1677
BfrI CTTAAG 2 cut(s) 1370, 1981
BfuI GTATCC 3 cut(s) 295, 2075, 3180
BlpI GCTNAGC 2 cut(s) 1509, 2460
Bme1390I CCNGG 5 cut(s) 1421, 2380, 2954, 3200, 3392
Bme18I GGWCC 3 cut(s) 1826, 2816, 3556
BmeT110I CYCGRG 2 cut(s) 1642, 2467
BmgT120I GGNCC 5 cut(s) 1597, 1826, 2816, 3022, 3556
BmiI GGNNCC 9 cut(s) 1425, 1598, 1851, 3016, 3024, 3334, 3396, 3557, 3615
BmrFI CCNGG 5 cut(s) 1421, 2380, 2954, 3200, 3392
BmrI ACTGGG 2 cut(s) 510, 2165
BmuI ACTGGG 2 cut(s) 510, 2165
BoxI GACNNNNGTC 1 cut(s) 1742
BpiI GAAGAC 1 cut(s) 3236
BplI GAGNNNNNCTC 2 cut(s) 1931, 1963
BpmI CTGGAG 1 cut(s) 432
Bpu10I CCTNAGC 1 cut(s) 2282
Bpu1102I GCTNAGC 2 cut(s) 1509, 2460
BpuEI CTTGAG 1 cut(s) 1933
BpuMI CCSGG 1 cut(s) 2380
BsaI GGTCTC 1 cut(s) 3283
BsaXI ACNNNNNCTCC 8 cut(s) 594, 624, 738, 768, 818, 848, 972, 1002
Bsc4I CCNNNNNNNGG 5 cut(s) 630, 1340, 1986, 2228, 3311
Bse21I CCTNAGG 1 cut(s) 1548
Bse3DI GCAATG 3 cut(s) 1788, 3429, 3786
BseBI CCWGG 4 cut(s) 1421, 2954, 3200, 3392
BseLI CCNNNNNNNGG 5 cut(s) 630, 1340, 1986, 2228, 3311
BseMI GCAATG 3 cut(s) 1788, 3429, 3786
BseMII CTCAG 8 cut(s) 1169, 1500, 1562, 1598, 1683, 1698, 2451, 2551
BseRI GAGGAG 2 cut(s) 146, 996
BseYI CCCAGC 1 cut(s) 2915
BsgI GTGCAG 2 cut(s) 411, 3774
Bsh1236I CGCG 1 cut(s) 723
Bsh1285I CGRYCG 1 cut(s) 219
BshFI GGCC 6 cut(s) 551, 1410, 1517, 1599, 2378, 3023
BshNI GGYRCC 2 cut(s) 3332, 3613
BsiEI CGRYCG 1 cut(s) 219
BsiHKAI GWGCWC 5 cut(s) 1769, 2050, 2466, 3050, 3652
BsiHKCI CYCGRG 2 cut(s) 1642, 2467
BsiSI CCGG 1 cut(s) 2379
BslFI GGGAC 1 cut(s) 1566
BslI CCNNNNNNNGG 5 cut(s) 630, 1340, 1986, 2228, 3311
BsmAI GTCTC 8 cut(s) 285, 412, 701, 1091, 2134, 3009, 3283, 3803
BsmFI GGGAC 1 cut(s) 1566
BsmI GAATGC 2 cut(s) 1783, 2560
BsnI GGCC 6 cut(s) 551, 1410, 1517, 1599, 2378, 3023
Bso31I GGTCTC 1 cut(s) 3283
BsoBI CYCGRG 2 cut(s) 1642, 2467
Bsp1286I GDGCHC 6 cut(s) 1769, 2050, 2466, 2923, 3050, 3652
Bsp1720I GCTNAGC 2 cut(s) 1509, 2460
Bsp19I CCATGG 2 cut(s) 552, 3018
BspACI CCGC 6 cut(s) 463, 721, 723, 948, 1065, 2140
BspANI GGCC 6 cut(s) 551, 1410, 1517, 1599, 2378, 3023
BspCNI CTCAG 8 cut(s) 1170, 1501, 1561, 1597, 1684, 1697, 2452, 2550
BspFNI CGCG 1 cut(s) 723
BspHI TCATGA 1 cut(s) 690
BspLI GGNNCC 9 cut(s) 1425, 1598, 1851, 3016, 3024, 3334, 3396, 3557, 3615
BspMAI CTGCAG 3 cut(s) 923, 2200, 3291
BspPI GGATC 6 cut(s) 1153, 1400, 1844, 1857, 3210, 3296
BspT107I GGYRCC 2 cut(s) 3332, 3613
BspTI CTTAAG 2 cut(s) 1370, 1981
BspTNI GGTCTC 1 cut(s) 3283
BsrDI GCAATG 3 cut(s) 1788, 3429, 3786
BssT1I CCWWGG 4 cut(s) 330, 552, 624, 3018
Bst2UI CCWGG 4 cut(s) 1421, 2954, 3200, 3392
Bst6I CTCTTC 3 cut(s) 666, 1149, 2517
BstAFI CTTAAG 2 cut(s) 1370, 1981
BstAPI GCANNNNNTGC 4 cut(s) 374, 1265, 2483, 3860
BstC8I GCNNGC 7 cut(s) 54, 813, 1038, 1515, 2719, 2902, 2938
BstDSI CCRYGG 7 cut(s) 186, 552, 721, 1162, 2730, 2739, 3018
BstENI CCTNNNNNAGG 1 cut(s) 1984
BstFNI CGCG 1 cut(s) 723
BstH2I RGCGCY 2 cut(s) 341, 1677
BstHHI GCGC 5 cut(s) 224, 340, 1676, 2347, 3730
BstMAI GTCTC 8 cut(s) 285, 412, 701, 1091, 2134, 3009, 3283, 3803
BstMCI CGRYCG 1 cut(s) 219
BstNI CCWGG 4 cut(s) 1421, 2954, 3200, 3392
BstNSI RCATGY 3 cut(s) 199, 2904, 3863
BstPAI GACNNNNGTC 1 cut(s) 1742
BstSCI CCNGG 5 cut(s) 1419, 2378, 2952, 3198, 3390
BstSFI CTRYAG 7 cut(s) 360, 919, 1119, 2196, 3120, 3287, 3714
BstUI CGCG 1 cut(s) 723
BstV2I GAAGAC 1 cut(s) 3236
BstX2I RGATCY 3 cut(s) 1158, 1849, 3202
BstXI CCANNNNNNTGG 2 cut(s) 313, 3566
BstYI RGATCY 3 cut(s) 1158, 1849, 3202
Bsu36I CCTNAGG 1 cut(s) 1548
BsuI GTATCC 3 cut(s) 295, 2075, 3180
BsuRI GGCC 6 cut(s) 551, 1410, 1517, 1599, 2378, 3023
BtgI CCRYGG 7 cut(s) 186, 552, 721, 1162, 2730, 2739, 3018
BtsI GCAGTG 2 cut(s) 3281, 3774
Cac8I GCNNGC 7 cut(s) 54, 813, 1038, 1515, 2719, 2902, 2938
CaiI CAGNNNCTG 3 cut(s) 374, 1691, 3205
CciI TCATGA 1 cut(s) 690
CfoI GCGC 5 cut(s) 224, 340, 1676, 2347, 3730
Cfr13I GGNCC 5 cut(s) 1597, 1826, 2816, 3022, 3556
Cfr42I CCGCGG 1 cut(s) 724
DraIII CACNNNGTG 1 cut(s) 2045
EaeI YGGCCR 2 cut(s) 1515, 2376
Eam1104I CTCTTC 3 cut(s) 666, 1149, 2517
EarI CTCTTC 3 cut(s) 666, 1149, 2517
Ecl136II GAGCTC 1 cut(s) 3048
Eco130I CCWWGG 4 cut(s) 330, 552, 624, 3018
Eco147I AGGCCT 1 cut(s) 1410
Eco24I GRGCYC 2 cut(s) 2923, 3050
Eco31I GGTCTC 1 cut(s) 3283
Eco47I GGWCC 3 cut(s) 1826, 2816, 3556
Eco47III AGCGCT 2 cut(s) 339, 1675
Eco53kI GAGCTC 1 cut(s) 3048
Eco57I CTGAAG 3 cut(s) 1655, 2796, 3377
Eco81I CCTNAGG 1 cut(s) 1548
Eco88I CYCGRG 2 cut(s) 1642, 2467
EcoICRI GAGCTC 1 cut(s) 3048
EcoNI CCTNNNNNAGG 1 cut(s) 1984
EcoO109I RGGNCCY 1 cut(s) 2816
EcoRI GAATTC 2 cut(s) 83, 1647
EcoRII CCWGG 4 cut(s) 1419, 2952, 3198, 3390
EcoT14I CCWWGG 4 cut(s) 330, 552, 624, 3018
EcoT22I ATGCAT 2 cut(s) 2560, 2902
EcoT38I GRGCYC 2 cut(s) 2923, 3050
ErhI CCWWGG 4 cut(s) 330, 552, 624, 3018
FalI AAGNNNNNCTT 4 cut(s) 2118, 2150, 2246, 2278
FaqI GGGAC 1 cut(s) 1566
FauI CCCGC 1 cut(s) 728
FauNDI CATATG 1 cut(s) 3436
FbaI TGATCA 4 cut(s) 10, 261, 405, 1924
FriOI GRGCYC 2 cut(s) 2923, 3050
FspBI CTAG 9 cut(s) 1251, 1556, 1841, 1937, 2183, 2642, 3539, 3632, 3689
FspI TGCGCA 1 cut(s) 3729
GlaI GCGC 5 cut(s) 223, 339, 1675, 2346, 3729
GsaI CCCAGC 1 cut(s) 2919
GsuI CTGGAG 1 cut(s) 432
HaeII RGCGCY 2 cut(s) 341, 1677
HaeIII GGCC 6 cut(s) 551, 1410, 1517, 1599, 2378, 3023
HapII CCGG 1 cut(s) 2379
HhaI GCGC 5 cut(s) 224, 340, 1676, 2347, 3730
Hin6I GCGC 5 cut(s) 222, 338, 1674, 2345, 3728
HinP1I GCGC 5 cut(s) 222, 338, 1674, 2345, 3728
HincII GTYRAC 1 cut(s) 1732
HindII GTYRAC 1 cut(s) 1732
HindIII AAGCTT 2 cut(s) 164, 846
HpaI GTTAAC 1 cut(s) 1732
HpaII CCGG 1 cut(s) 2379
Hpy166II GTNNAC 2 cut(s) 1732, 3518
Hpy8I GTNNAC 2 cut(s) 1732, 3518
HpyAV CCTTC 7 cut(s) 556, 2281, 2705, 2807, 3127, 3440, 3604
HspAI GCGC 5 cut(s) 222, 338, 1674, 2345, 3728
KpnI GGTACC 1 cut(s) 3336
Ksp22I TGATCA 4 cut(s) 10, 261, 405, 1924
KspAI GTTAAC 1 cut(s) 1732
KspI CCGCGG 1 cut(s) 724
LmnI GCTCC 3 cut(s) 746, 2053, 3394
MaeI CTAG 9 cut(s) 1251, 1556, 1841, 1937, 2183, 2642, 3539, 3632, 3689
MaeIII GTNAC 6 cut(s) 29, 971, 2021, 2056, 3314, 3454
MfeI CAATTG 5 cut(s) 225, 1485, 2478, 2568, 2757
MflI RGATCY 3 cut(s) 1158, 1849, 3202
MhlI GDGCHC 6 cut(s) 1769, 2050, 2466, 2923, 3050, 3652
MlsI TGGCCA 1 cut(s) 1517
MluNI TGGCCA 1 cut(s) 1517
MlyI GAGTC 4 cut(s) 287, 703, 1676, 2285
MmeI TCCRAC 6 cut(s) 380, 724, 1255, 1405, 3226, 3583
Mox20I TGGCCA 1 cut(s) 1517
Mph1103I ATGCAT 2 cut(s) 2560, 2902
MscI TGGCCA 1 cut(s) 1517
MslI CAYNNNNRTG 5 cut(s) 200, 995, 1045, 2469, 3864
Msp20I TGGCCA 1 cut(s) 1517
MspA1I CMGCKG 5 cut(s) 371, 723, 1067, 2102, 3355
MspCI CTTAAG 2 cut(s) 1370, 1981
MspI CCGG 1 cut(s) 2379
MspR9I CCNGG 5 cut(s) 1421, 2380, 2954, 3200, 3392
MunI CAATTG 5 cut(s) 225, 1485, 2478, 2568, 2757
Mva1269I GAATGC 2 cut(s) 1783, 2560
MvaI CCWGG 4 cut(s) 1421, 2954, 3200, 3392
MvnI CGCG 1 cut(s) 723
NciI CCSGG 1 cut(s) 2380
NcoI CCATGG 2 cut(s) 552, 3018
NdeI CATATG 1 cut(s) 3436
NlaIV GGNNCC 9 cut(s) 1425, 1598, 1851, 3016, 3024, 3334, 3396, 3557, 3615
NmuCI GTSAC 3 cut(s) 2021, 2056, 3314
NsbI TGCGCA 1 cut(s) 3729
NsiI ATGCAT 2 cut(s) 2560, 2902
NspI RCATGY 3 cut(s) 199, 2904, 3863
OliI CACNNNNGTG 1 cut(s) 2469
PaeI GCATGC 1 cut(s) 2904
PaeR7I CTCGAG 1 cut(s) 2467
PagI TCATGA 1 cut(s) 690
PceI AGGCCT 1 cut(s) 1410
PciI ACATGT 1 cut(s) 195
PctI GAATGC 2 cut(s) 1783, 2560
PfeI GAWTC 8 cut(s) 182, 1233, 1688, 1991, 3107, 3308, 3662, 3706
PflMI CCANNNNNTGG 1 cut(s) 630
PfoI TCCNGGA 2 cut(s) 2952, 3198
Ple19I CGATCG 1 cut(s) 219
PleI GAGTC 4 cut(s) 287, 702, 1676, 2285
PpsI GAGTC 4 cut(s) 287, 702, 1676, 2285
PpuMI RGGWCCY 1 cut(s) 2816
PscI ACATGT 1 cut(s) 195
PshAI GACNNNNGTC 1 cut(s) 1742
PshBI ATTAAT 3 cut(s) 993, 1365, 2309
PsiI TTATAA 2 cut(s) 1086, 1877
Psp124BI GAGCTC 1 cut(s) 3050
Psp5II RGGWCCY 1 cut(s) 2816
Psp6I CCWGG 4 cut(s) 1419, 2952, 3198, 3390
PspFI CCCAGC 1 cut(s) 2915
PspGI CCWGG 4 cut(s) 1419, 2952, 3198, 3390
PspN4I GGNNCC 9 cut(s) 1425, 1598, 1851, 3016, 3024, 3334, 3396, 3557, 3615
PspPI GGNCC 5 cut(s) 1597, 1826, 2816, 3022, 3556
PspPPI RGGWCCY 1 cut(s) 2816
PspXI VCTCGAGB 1 cut(s) 2467
PstI CTGCAG 3 cut(s) 923, 2200, 3291
PstNI CAGNNNCTG 3 cut(s) 374, 1691, 3205
PsuI RGATCY 3 cut(s) 1158, 1849, 3202
PvuI CGATCG 1 cut(s) 219
PvuII CAGCTG 3 cut(s) 371, 2102, 3355
RseI CAYNNNNRTG 5 cut(s) 200, 995, 1045, 2469, 3864
SacI GAGCTC 1 cut(s) 3050
SacII CCGCGG 1 cut(s) 724
Sau96I GGNCC 5 cut(s) 1597, 1826, 2816, 3022, 3556
SchI GAGTC 4 cut(s) 287, 703, 1676, 2285
ScrFI CCNGG 5 cut(s) 1421, 2380, 2954, 3200, 3392
SduI GDGCHC 6 cut(s) 1769, 2050, 2466, 2923, 3050, 3652
SfcI CTRYAG 7 cut(s) 360, 919, 1119, 2196, 3120, 3287, 3714
Sfr274I CTCGAG 1 cut(s) 2467
Sfr303I CCGCGG 1 cut(s) 724
SgrBI CCGCGG 1 cut(s) 724
SinI GGWCC 3 cut(s) 1826, 2816, 3556
SlaI CTCGAG 1 cut(s) 2467
SmiMI CAYNNNNRTG 5 cut(s) 200, 995, 1045, 2469, 3864
SmlI CTYRAG 4 cut(s) 1370, 1948, 1981, 2467
SmoI CTYRAG 4 cut(s) 1370, 1948, 1981, 2467
SpeI ACTAGT 2 cut(s) 1840, 3538
SphI GCATGC 1 cut(s) 2904
SseBI AGGCCT 1 cut(s) 1410
SsiI CCGC 6 cut(s) 463, 721, 723, 948, 1065, 2140
SspI AATATT 3 cut(s) 459, 1224, 1459
SspMI CTAG 9 cut(s) 1251, 1556, 1841, 1937, 2183, 2642, 3539, 3632, 3689
SstI GAGCTC 1 cut(s) 3050
StuI AGGCCT 1 cut(s) 1410
StyD4I CCNGG 5 cut(s) 1419, 2378, 2952, 3198, 3390
StyI CCWWGG 4 cut(s) 330, 552, 624, 3018
TaqI TCGA 7 cut(s) 1095, 2468, 2515, 2667, 2923, 3694, 3709
TaqII GACCGA 1 cut(s) 3093
TatI WGTACW 1 cut(s) 825
TauI GCSGC 3 cut(s) 466, 951, 2142
TfiI GAWTC 8 cut(s) 182, 1233, 1688, 1991, 3107, 3308, 3662, 3706
TseFI GTSAC 3 cut(s) 2021, 2056, 3314
Tsp45I GTSAC 3 cut(s) 2021, 2056, 3314
TspGWI ACGGA 5 cut(s) 48, 203, 314, 1151, 2747
Van91I CCANNNNNTGG 1 cut(s) 630
Vha464I CTTAAG 2 cut(s) 1370, 1981
VpaK11BI GGWCC 3 cut(s) 1826, 2816, 3556
VspI ATTAAT 3 cut(s) 993, 1365, 2309
XagI CCTNNNNNAGG 1 cut(s) 1984
XapI RAATTY 6 cut(s) 83, 1347, 1529, 1647, 3127, 3146
XbaI TCTAGA 1 cut(s) 3631
XceI RCATGY 3 cut(s) 199, 2904, 3863
XcmI CCANNNNNNNNNTGG 2 cut(s) 2737, 3566
XhoI CTCGAG 1 cut(s) 2467
XspI CTAG 9 cut(s) 1251, 1556, 1841, 1937, 2183, 2642, 3539, 3632, 3689
Zsp2I ATGCAT 2 cut(s) 2560, 2902
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.