Rw4G024050

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000116
Physical Location & Seq
Forward (+)
49935792 .. 49941291
5500 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G024050.1

Sequence Viewer

Length: 3579 bp
ATGGCTGAGGAGAATCCTTCAGATGGAGATGCAATAACAGAGCAAGAAACTCCAACAAATAGCCATCCAACAATACGAGCAAGCAAGGAGGATGGAACTAAAACAGTTCCACTCTACAAACTTTTCTCTTTTGCCGATTCCATGGATTACCTGTTAATGTCTGTTGGTACAATCAGCGCTATTGGTAATGGACTCTGTATGCCTCTACTGACCATAATCTTTGGAGATCTAATTACTTCTTTTAGAGAAACTGGGAATAACAAGAGAGTGGCTGATGCAGTTTCCAAGGTGGCTCTAAAGTATGTTTACTTGGCTCTTGGGGGTGCTGCTGCAGCATTTCTACTGAAATACTTGATTTCTGTGTGCTGGATGAGCACTGGAGAGAGACAGACCATACTGAGGCAAGATGTCAGCTTTTTTGATCAAGAAATCAACTCTGGGGAAATTCTTGGGAGGATGTCAGGTGATACTCTGCTCATTAAAGAGGCAATGGGCGAGAAGGTAGGAACTTTTTTCCAAGTAGTTGCAACATTCATAGGCAGCTACTTTATAGCATTTTTTAAGGGATGGCTTCTCACCCTTGTCATGCTATCCTCTATTCCCCCTCTTGTCTTATCTGGTGCTGTCATGAACCATTTCATAGTGAAATTGGCGTCCCATGGACAAGCTGCATATTCAGGAGGAGCAATTGTGGTTGCATCGTTCACAGGGGAGAAGCAAGCTATATCTAACTACAATAACTCCTTGAATAAAGCTTACAAGTCCGGTGTGCAAGAGGGTTGGGCATCTGGTTTGGGTTCTGGTGTACTTATGCTTTTGGTATTCTGTACTTATGCTTTGGCCGTATGGTTTGCTGGAATAATGATACTTGAAAAAGGATACAAGGGAGAAGATGCCATGATAGTAATTTTTGCTGTGATATGCTTACTTTTTCTTTATAAATTTTCAGATCTCTTGAAAGTGTCTCCTTGCATCACTGCATTTGCTCCTGGACAAGCTGCAGCTTATAAGATGTTTGAGACAATTAACAGAAAGCCAAAGATAGATGCGTATGATACTAATGGGAGGGTATTACAAGATATTCATGGAGACATAGAACTGAGGGATGTTTGTTTTAGTTATCCCACAAGACTGGATGAGCAAATATTCAATGGATTTTGTCTCTCAATACCTAGTGGTGCAACTGCTGCTTTGGTTGGAGAAAGCGGAAGTGGTAAATCAACTGTACTCAGTTTGATTGAGAGATTTTATGACCCCCAGGATGGTGAAGTTCTTATTGATTGTGTTAATATCAAAGAGTTCCAACTGAAATGGATCAGACAGAAAATTGGCCTTGTATGCCAGGAACCAGTTTTGTTTACTGGTAGCATTAAAGATAATATTGTGTTTGGAAAGGATGGTGCTACTACTGAAGAGGTATTTCTGAAGAACCCAAGAATTTTACTTTTAGATGAAGCCACAAGCGCTCTTGACACAGAATCTGAAAGAGTTGTTCAGGAGGCACTGGACAGAATTATGGTTGACCGGACTACTATCATTGTAGCCCATCGCTTGAGCACTGTAAGGAATGCTGATACCATTGCTGTCATACATCACGGAAAAATTGCTGAGAAAGGACCACATTCTGAGCTAAGCAGGGATCCCGATGGAGCATATAGCAGGCTTATAAGGTTGCAAGAAACTAGTTCTGTGTCAGAACACTCGGAACATACTTGTCTAAGTTCTGAGAAATCATCTCCAAGAAGTGGTAGTCGTCACTCATTCTCAATCTCATATGGTAATACTACTGCAAGCGGTATCCTTGAAACAACAACTGTGGAACCTGATGTTCCTGCTTCAGTACCATCAGAAGGGCCTCCAGGAGTCTCTCTTTGCCGCCTTGCTTACCTGAACAAGCCAGAGATACCAGTGCTACTTCTAGGTACTATAGTTGCAGCAGTCAATGGGGTAATCTTCCCTGTTTATGGTAGTTTGTTGTCAAGTGTAATCAAGACCTTCTTTGAGCCACCTCATGAACTCCGTAAGCATTCCAAGTTTTGGGCATCAATCTTTGTTGTTCTTGGAGTGGTATCTTTCTTAGCACAATCATCAAGAGCGTACCTCTTTGCCGTGGCGGGTTGCAGGTTAATAAGAAGAGTCCGAGCAATGTGCTTTGAGAAGGTGGTTTACATGGAAGTAAGTTGGTTCGATGAAGCTGAGCACTCAAGTGGTGCCATTGGGGCAAGGCTTTCTACAGATGCAGCGTCTTTGAGAGGGCTTGTTGGAGATGCTCTTGGTTTGTTGATTCAGAATACAGCAACAGCAATTACGGGGATGATTATTGCTTTTAGTGCAAATTGGCAACTTTCTCTTGTAATCCTTGTTCTGTTACCCTTATTAGGAGTAAATGGATATTTTCAAAAAATGTACGAGGATGCAAGCCAAGTAGCTAGTGATGCTGTGGGGAGTATTCGGACAATTGCTTCCTTTTGCGCTGAAGAGAAGGTGATTGAGTTGTACAAGAAAAAATGTGAAGGCCCTATTAAGACAGGGATAAGACAAGGGATAGTTACTGGGATAGGTTTCGGGGTATCACTCTTTTTACAGTTTTCAGTGTTTGCCTTGATTTTTTATACTGGAGGTCTACTTGTTGCAGCAGGCAAGACAACATTCTTTGCTGTTTTCCAGGCTTTCTTTGCTCTCACTATTGCTTCTCTCGGACTTGCTCAGTCGAGCTCCCTAGCACCTGATGTTAGTAAAGGAAAGAGCTCTGCTGCTTCCATATTTGCAATTCTTGACCGGAAATCAAAAATAGACTCTAGTGATAACTCGGGCATGACAATAGAGAATGTGAAAGGAGAAATTGAATTTCAGCATGTCAATTTCAAGTATCCTAGTAGACCTAAAGTGCCAATTTTCAACGATCTTTGCTTGACCATTAGTTGTGGCAAGACAATTGCTCTGGTTGGTGAAAGTGGGAGTGGAAAATCGACAGTGATCTCTTTGATCCAGAGATTTTACGACCCCAATGCTGGTCACATTACATTGGATGGAATCAAAATCCAGAAACTACAGTTGAGTTGGTTAAGAAAGCAAATGGGGCTGGTGAGCCAGGAGCCTCCGCTGTTTAATGACACCATCCGAGCCAACATTGCATATGGAAAGGGAGGAGAGGCAACCGAGGCTGAAGTTATAGCTGCAGCAGAACTGGCAAATGCACAAGAGTTCATTAGTAGTTTACAACATGGTTATGATACAATAGTAGGAGAGCGAGGGGTCCAATTGTCCGGTGGACAGAAGCAAAGAGTTGCTATTGCACGAGCTATTTTGAAGGCACCAAAGATATTACTACTTGATGAAGCCACTAGTGCTCTTGATGCTGAATCCGAACGAGTGGTTCAAGATGCACTGGACCGAGTTATGGTGGATCGAACCACAGTGGTTGTTGCCCATCGGTTTTCCACAATAAAAGGTGCTGATGTCATTGCTGTGGTAAAAAATGGAGTCATTGCAGAGAAAGGGAAGCATGAAAGTTTGATCACAATCAACAATGGCATTTATGCTTCTTTGGTAGCATTTCATGCAAGTGCCTCATCTTAG

Protein Analysis

1192

Amino Acids

128.76

Weight (kDa)

6.26

Isoelectric Point (pI)

31.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 55 - 307 4.1e-34 ABC transporter transmembrane region
ABC_tran PF00005 385 - 466 3.5e-14 ABC transporter
ABC_membrane PF00664 638 - 898 5.4e-46 ABC transporter transmembrane region
ABC_tran PF00005 967 - 1116 1.1e-33 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 939, 1008, 1667
Acc36I ACCTGC 1 cut(s) 2112
AccB1I GGYRCC 2 cut(s) 2210, 3313
AccB7I CCANNNNNTGG 2 cut(s) 1745, 2037
AccI GTMKAC 2 cut(s) 2623, 2878
AciI CCGC 5 cut(s) 1206, 1794, 1876, 2114, 3101
AclWI GGATC 5 cut(s) 1322, 1634, 1647, 2980, 3414
AcoI YGGCCR 1 cut(s) 840
AcsI RAATTY 4 cut(s) 444, 941, 1437, 2846
AcuI CTGAAG 5 cut(s) 1431, 1445, 1821, 2496, 3186
AcyI GRCGYC 1 cut(s) 653
AfaI GTAC 9 cut(s) 169, 807, 829, 1227, 1842, 1924, 2099, 2408, 2498
AfeI AGCGCT 2 cut(s) 178, 1465
AhlI ACTAGT 2 cut(s) 1682, 3344
AjnI CCWGG 6 cut(s) 988, 1257, 1341, 1858, 2664, 3090
AleI CACNNNNGTG 1 cut(s) 2205
Alw21I GWGCWC 6 cut(s) 377, 1559, 2202, 2717, 2750, 3352
Alw26I GTCTC 6 cut(s) 379, 969, 1013, 1083, 1166, 1870
AlwI GGATC 5 cut(s) 1322, 1634, 1647, 2980, 3414
AlwNI CAGNNNCTG 1 cut(s) 1481
Ama87I CYCGRG 1 cut(s) 2809
Aor51HI AGCGCT 2 cut(s) 178, 1465
AoxI GGCC 4 cut(s) 840, 1330, 1853, 2515
ApoI RAATTY 4 cut(s) 444, 941, 1437, 2846
Asp700I GAANNNNTTC 1 cut(s) 635
AspLEI GCGC 3 cut(s) 179, 1466, 2474
AspS9I GGNCC 5 cut(s) 1616, 1853, 2516, 3256, 3391
AsuHPI GGTGA 6 cut(s) 476, 568, 1277, 2497, 2960, 3097
AvaI CYCGRG 1 cut(s) 2809
AvaII GGWCC 3 cut(s) 1616, 3256, 3391
BaeI ACNNNNGTAYC 4 cut(s) 1914, 1947, 3225, 3258
BamHI GGATCC 1 cut(s) 1639
BanI GGYRCC 2 cut(s) 2210, 3313
BanII GRGCYC 2 cut(s) 2717, 2750
BarI GAAGNNNNNNTAC 2 cut(s) 2150, 2182
BauI CACGAG 1 cut(s) 3297
Bbv12I GWGCWC 6 cut(s) 377, 1559, 2202, 2717, 2750, 3352
BbvCI CCTCAGC 1 cut(s) 6
BceAI ACGGC 2 cut(s) 827, 2093
BcgI CGANNNNNNTGC 4 cut(s) 2130, 2164, 2990, 3024
BciT130I CCWGG 6 cut(s) 990, 1259, 1343, 1860, 2666, 3092
BciVI GTATCC 3 cut(s) 872, 1808, 2880
BclI TGATCA 2 cut(s) 421, 3516
BcoDI GTCTC 6 cut(s) 379, 969, 1013, 1083, 1166, 1870
BcuI ACTAGT 2 cut(s) 1682, 3344
BfaI CTAG 8 cut(s) 1173, 1683, 1919, 2430, 2720, 2799, 2874, 3345
BfmI CTRYAG 6 cut(s) 330, 999, 1926, 2232, 3050, 3177
BfoI RGCGCY 2 cut(s) 180, 1467
BfuAI ACCTGC 1 cut(s) 2112
BfuI GTATCC 3 cut(s) 872, 1808, 2880
BglI GCCNNNNNGGC 1 cut(s) 2219
BglII AGATCT 2 cut(s) 226, 949
BlpI GCTNAGC 2 cut(s) 1631, 2196
Bme1390I CCNGG 6 cut(s) 990, 1259, 1343, 1860, 2666, 3092
Bme18I GGWCC 3 cut(s) 1616, 3256, 3391
BmeT110I CYCGRG 1 cut(s) 2809
BmgT120I GGNCC 5 cut(s) 1616, 1853, 2516, 3256, 3391
BmiI GGNNCC 7 cut(s) 1347, 1641, 1821, 2212, 3096, 3257, 3315
BmrFI CCNGG 6 cut(s) 990, 1259, 1343, 1860, 2666, 3092
BmrI ACTGGG 2 cut(s) 261, 2562
BmuI ACTGGG 2 cut(s) 261, 2562
BplI GAGNNNNNCTC 2 cut(s) 2085, 2117
BpmI CTGGAG 3 cut(s) 399, 1842, 2637
Bpu10I CCTNAGC 1 cut(s) 6
Bpu1102I GCTNAGC 2 cut(s) 1631, 2196
BpuEI CTTGAG 2 cut(s) 1573, 2188
BsaBI GATNNNNATC 1 cut(s) 3521
BsaHI GRCGYC 1 cut(s) 653
BsaJI CCNNGG 6 cut(s) 141, 285, 658, 1257, 2109, 3159
BsaWI WCCGGW 4 cut(s) 764, 1524, 2778, 3266
BsaXI ACNNNNNCTCC 4 cut(s) 675, 705, 725, 755
Bse3DI GCAATG 6 cut(s) 495, 1578, 2151, 3129, 3462, 3486
Bse8I GATNNNNATC 1 cut(s) 3521
BseBI CCWGG 6 cut(s) 990, 1259, 1343, 1860, 2666, 3092
BseDI CCNNGG 6 cut(s) 141, 285, 658, 1257, 2109, 3159
BseJI GATNNNNATC 1 cut(s) 3521
BseMI GCAATG 6 cut(s) 495, 1578, 2151, 3129, 3462, 3486
BseMII CTCAG 8 cut(s) 389, 1091, 1243, 1599, 1617, 1716, 2187, 2720
BseRI GAGGAG 3 cut(s) 23, 696, 3162
BshFI GGCC 4 cut(s) 842, 1332, 1855, 2517
BshNI GGYRCC 2 cut(s) 2210, 3313
BsiHKAI GWGCWC 6 cut(s) 377, 1559, 2202, 2717, 2750, 3352
BsiHKCI CYCGRG 1 cut(s) 2809
BsiSI CCGG 4 cut(s) 765, 1525, 2779, 3267
BslFI GGGAC 1 cut(s) 640
BsmAI GTCTC 6 cut(s) 379, 969, 1013, 1083, 1166, 1870
BsmFI GGGAC 1 cut(s) 640
BsmI GAATGC 2 cut(s) 1573, 2026
BsnI GGCC 4 cut(s) 842, 1332, 1855, 2517
BsoBI CYCGRG 1 cut(s) 2809
Bsp1286I GDGCHC 6 cut(s) 377, 1559, 2202, 2717, 2750, 3352
Bsp1407I TGTACA 1 cut(s) 2496
Bsp1720I GCTNAGC 2 cut(s) 1631, 2196
Bsp19I CCATGG 2 cut(s) 141, 658
BspACI CCGC 5 cut(s) 1206, 1794, 1876, 2114, 3101
BspANI GGCC 4 cut(s) 842, 1332, 1855, 2517
BspCNI CTCAG 8 cut(s) 390, 1092, 1242, 1600, 1618, 1717, 2188, 2719
BspHI TCATGA 2 cut(s) 627, 2011
BspLI GGNNCC 7 cut(s) 1347, 1641, 1821, 2212, 3096, 3257, 3315
BspMAI CTGCAG 3 cut(s) 334, 1003, 3181
BspMI ACCTGC 1 cut(s) 2112
BspPI GGATC 5 cut(s) 1322, 1634, 1647, 2980, 3414
BspT107I GGYRCC 2 cut(s) 2210, 3313
BsrDI GCAATG 6 cut(s) 495, 1578, 2151, 3129, 3462, 3486
BsrGI TGTACA 1 cut(s) 2496
BssECI CCNNGG 6 cut(s) 141, 285, 658, 1257, 2109, 3159
BssNI GRCGYC 1 cut(s) 653
BssSI CACGAG 1 cut(s) 3297
BssT1I CCWWGG 3 cut(s) 141, 285, 658
Bst2BI CACGAG 1 cut(s) 3297
Bst2UI CCWGG 6 cut(s) 990, 1259, 1343, 1860, 2666, 3092
Bst4CI ACNGT 8 cut(s) 106, 1225, 1561, 1816, 2586, 2974, 3054, 3418
Bst6I CTCTTC 3 cut(s) 1407, 2128, 2472
BstACI GRCGYC 1 cut(s) 653
BstAPI GCANNNNNTGC 2 cut(s) 1187, 3560
BstAUI TGTACA 1 cut(s) 2496
BstC8I GCNNGC 6 cut(s) 82, 720, 1661, 1792, 2419, 2638
BstDSI CCRYGG 3 cut(s) 141, 658, 2109
BstH2I RGCGCY 2 cut(s) 180, 1467
BstHHI GCGC 3 cut(s) 179, 1466, 2474
BstMAI GTCTC 6 cut(s) 379, 969, 1013, 1083, 1166, 1870
BstNI CCWGG 6 cut(s) 990, 1259, 1343, 1860, 2666, 3092
BstNSI RCATGY 1 cut(s) 2858
BstSCI CCNGG 6 cut(s) 988, 1257, 1341, 1858, 2664, 3090
BstSFI CTRYAG 6 cut(s) 330, 999, 1926, 2232, 3050, 3177
BstX2I RGATCY 3 cut(s) 226, 949, 1639
BstXI CCANNNNNNTGG 1 cut(s) 1132
BstYI RGATCY 3 cut(s) 226, 949, 1639
BsuI GTATCC 3 cut(s) 872, 1808, 2880
BsuRI GGCC 4 cut(s) 842, 1332, 1855, 2517
BtgI CCRYGG 3 cut(s) 141, 658, 2109
BtgZI GCGATG 1 cut(s) 1532
BtsI GCAGTG 1 cut(s) 975
BtsIMutI CAGTG 9 cut(s) 375, 975, 1502, 1557, 1914, 2598, 2979, 3386, 3423
BveI ACCTGC 1 cut(s) 2112
Cac8I GCNNGC 6 cut(s) 82, 720, 1661, 1792, 2419, 2638
CaiI CAGNNNCTG 1 cut(s) 1481
CciI TCATGA 2 cut(s) 627, 2011
CfoI GCGC 3 cut(s) 179, 1466, 2474
Cfr13I GGNCC 5 cut(s) 1616, 1853, 2516, 3256, 3391
CseI GACGC 2 cut(s) 642, 2232
Csp6I GTAC 9 cut(s) 168, 806, 828, 1226, 1841, 1923, 2098, 2407, 2497
CspCI CAANNNNNGTGG 4 cut(s) 1797, 1832, 3403, 3438
CviQI GTAC 9 cut(s) 168, 806, 828, 1226, 1841, 1923, 2098, 2407, 2497
EaeI YGGCCR 1 cut(s) 840
Eam1104I CTCTTC 3 cut(s) 1407, 2128, 2472
EarI CTCTTC 3 cut(s) 1407, 2128, 2472
Ecl136II GAGCTC 2 cut(s) 2715, 2748
Eco130I CCWWGG 3 cut(s) 141, 285, 658
Eco24I GRGCYC 2 cut(s) 2717, 2750
Eco47I GGWCC 3 cut(s) 1616, 3256, 3391
Eco47III AGCGCT 2 cut(s) 178, 1465
Eco53kI GAGCTC 2 cut(s) 2715, 2748
Eco57I CTGAAG 5 cut(s) 1431, 1445, 1821, 2496, 3186
Eco88I CYCGRG 1 cut(s) 2809
EcoICRI GAGCTC 2 cut(s) 2715, 2748
EcoO109I RGGNCCY 2 cut(s) 1853, 2516
EcoRII CCWGG 6 cut(s) 988, 1257, 1341, 1858, 2664, 3090
EcoT14I CCWWGG 3 cut(s) 141, 285, 658
EcoT38I GRGCYC 2 cut(s) 2717, 2750
ErhI CCWWGG 3 cut(s) 141, 285, 658
FalI AAGNNNNNCTT 2 cut(s) 1982, 2014
FaqI GGGAC 1 cut(s) 640
FauI CCCGC 1 cut(s) 2107
FauNDI CATATG 2 cut(s) 1774, 3136
FbaI TGATCA 2 cut(s) 421, 3516
FblI GTMKAC 2 cut(s) 2623, 2878
FriOI GRGCYC 2 cut(s) 2717, 2750
FspBI CTAG 8 cut(s) 1173, 1683, 1919, 2430, 2720, 2799, 2874, 3345
GlaI GCGC 3 cut(s) 178, 1465, 2473
GsuI CTGGAG 3 cut(s) 399, 1842, 2637
HaeII RGCGCY 2 cut(s) 180, 1467
HaeIII GGCC 4 cut(s) 842, 1332, 1855, 2517
HapII CCGG 4 cut(s) 765, 1525, 2779, 3267
HgaI GACGC 2 cut(s) 642, 2232
HhaI GCGC 3 cut(s) 179, 1466, 2474
Hin1I GRCGYC 1 cut(s) 653
Hin6I GCGC 3 cut(s) 177, 1464, 2472
HinP1I GCGC 3 cut(s) 177, 1464, 2472
HincII GTYRAC 1 cut(s) 1522
HindII GTYRAC 1 cut(s) 1522
HindIII AAGCTT 1 cut(s) 753
HpaII CCGG 4 cut(s) 765, 1525, 2779, 3267
HphI GGTGA 6 cut(s) 476, 568, 1277, 2497, 2960, 3097
HpyAV CCTTC 8 cut(s) 27, 493, 1844, 2005, 2152, 2476, 2507, 3304
HpyCH4III ACNGT 8 cut(s) 106, 1225, 1561, 1816, 2586, 2974, 3054, 3418
Hsp92I GRCGYC 1 cut(s) 653
HspAI GCGC 3 cut(s) 177, 1464, 2472
Ksp22I TGATCA 2 cut(s) 421, 3516
LmnI GCTCC 5 cut(s) 683, 991, 1649, 2720, 3094
MaeI CTAG 8 cut(s) 1173, 1683, 1919, 2430, 2720, 2799, 2874, 3345
MaeIII GTNAC 4 cut(s) 1754, 2367, 2548, 3014
MboII GAAGA 6 cut(s) 902, 1424, 1438, 1945, 2145, 2489
MfeI CAATTG 4 cut(s) 687, 2457, 2934, 3260
MflI RGATCY 3 cut(s) 226, 949, 1639
MhlI GDGCHC 6 cut(s) 377, 1559, 2202, 2717, 2750, 3352
MlyI GAGTC 5 cut(s) 186, 1872, 2145, 2789, 3492
MmeI TCCRAC 5 cut(s) 77, 92, 1177, 1327, 2242
MroXI GAANNNNTTC 1 cut(s) 635
MslI CAYNNNNRTG 4 cut(s) 2205, 3228, 3467, 3564
MspA1I CMGCKG 1 cut(s) 3103
MspI CCGG 4 cut(s) 765, 1525, 2779, 3267
MspR9I CCNGG 6 cut(s) 990, 1259, 1343, 1860, 2666, 3092
MunI CAATTG 4 cut(s) 687, 2457, 2934, 3260
Mva1269I GAATGC 2 cut(s) 1573, 2026
MvaI CCWGG 6 cut(s) 990, 1259, 1343, 1860, 2666, 3092
NcoI CCATGG 2 cut(s) 141, 658
NdeI CATATG 2 cut(s) 1774, 3136
NlaIV GGNNCC 7 cut(s) 1347, 1641, 1821, 2212, 3096, 3257, 3315
NmuCI GTSAC 2 cut(s) 1754, 3014
NspI RCATGY 1 cut(s) 2858
OliI CACNNNNGTG 1 cut(s) 2205
PagI TCATGA 2 cut(s) 627, 2011
PctI GAATGC 2 cut(s) 1573, 2026
PdmI GAANNNNTTC 1 cut(s) 635
PfeI GAWTC 6 cut(s) 13, 137, 1478, 2284, 3033, 3362
PflMI CCANNNNNTGG 2 cut(s) 1745, 2037
PfoI TCCNGGA 2 cut(s) 988, 1858
PleI GAGTC 5 cut(s) 186, 1871, 2144, 2789, 3491
PpsI GAGTC 5 cut(s) 186, 1871, 2144, 2789, 3491
PsiI TTATAA 3 cut(s) 939, 1008, 1667
Psp124BI GAGCTC 2 cut(s) 2717, 2750
Psp6I CCWGG 6 cut(s) 988, 1257, 1341, 1858, 2664, 3090
PspGI CCWGG 6 cut(s) 988, 1257, 1341, 1858, 2664, 3090
PspN4I GGNNCC 7 cut(s) 1347, 1641, 1821, 2212, 3096, 3257, 3315
PspPI GGNCC 5 cut(s) 1616, 1853, 2516, 3256, 3391
PsrI GAACNNNNNNTAC 2 cut(s) 2346, 2378
PstI CTGCAG 3 cut(s) 334, 1003, 3181
PstNI CAGNNNCTG 1 cut(s) 1481
PsuI RGATCY 3 cut(s) 226, 949, 1639
RsaI GTAC 9 cut(s) 169, 807, 829, 1227, 1842, 1924, 2099, 2408, 2498
RsaNI GTAC 9 cut(s) 168, 806, 828, 1226, 1841, 1923, 2098, 2407, 2497
RseI CAYNNNNRTG 4 cut(s) 2205, 3228, 3467, 3564
SacI GAGCTC 2 cut(s) 2717, 2750
Sau96I GGNCC 5 cut(s) 1616, 1853, 2516, 3256, 3391
SchI GAGTC 5 cut(s) 186, 1872, 2145, 2789, 3492
ScrFI CCNGG 6 cut(s) 990, 1259, 1343, 1860, 2666, 3092
SduI GDGCHC 6 cut(s) 377, 1559, 2202, 2717, 2750, 3352
SfcI CTRYAG 6 cut(s) 330, 999, 1926, 2232, 3050, 3177
SinI GGWCC 3 cut(s) 1616, 3256, 3391
SmiMI CAYNNNNRTG 4 cut(s) 2205, 3228, 3467, 3564
SmlI CTYRAG 2 cut(s) 1552, 2203
SmoI CTYRAG 2 cut(s) 1552, 2203
SpeI ACTAGT 2 cut(s) 1682, 3344
SsiI CCGC 5 cut(s) 1206, 1794, 1876, 2114, 3101
SspI AATATT 2 cut(s) 1146, 1381
SspMI CTAG 8 cut(s) 1173, 1683, 1919, 2430, 2720, 2799, 2874, 3345
SstI GAGCTC 2 cut(s) 2717, 2750
StyD4I CCNGG 6 cut(s) 988, 1257, 1341, 1858, 2664, 3090
StyI CCWWGG 3 cut(s) 141, 285, 658
TaaI ACNGT 8 cut(s) 106, 1225, 1561, 1816, 2586, 2974, 3054, 3418
TaqI TCGA 4 cut(s) 2187, 2711, 2969, 3409
TaqII GACCGA 1 cut(s) 3408
TatI WGTACW 4 cut(s) 805, 827, 1225, 2496
TauI GCSGC 1 cut(s) 1878
TfiI GAWTC 6 cut(s) 13, 137, 1478, 2284, 3033, 3362
TscAI CASTG 9 cut(s) 382, 982, 1509, 1564, 1914, 2598, 2979, 3393, 3423
TseFI GTSAC 2 cut(s) 1754, 3014
Tsp45I GTSAC 2 cut(s) 1754, 3014
TspGWI ACGGA 2 cut(s) 1611, 2009
TspRI CASTG 9 cut(s) 382, 982, 1509, 1564, 1914, 2598, 2979, 3393, 3423
Van91I CCANNNNNTGG 2 cut(s) 1745, 2037
VpaK11BI GGWCC 3 cut(s) 1616, 3256, 3391
XapI RAATTY 4 cut(s) 444, 941, 1437, 2846
XceI RCATGY 1 cut(s) 2858
XcmI CCANNNNNNNNNTGG 1 cut(s) 3266
XmiI GTMKAC 2 cut(s) 2623, 2878
XmnI GAANNNNTTC 1 cut(s) 635
XspI CTAG 8 cut(s) 1173, 1683, 1919, 2430, 2720, 2799, 2874, 3345
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.