RLG00000007256

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
15029147 .. 15039474
10328 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007256

Sequence Viewer

Length: 3909 bp
ATGCATAGAATTTCCATCATACAAGGAAACTCAATTACTGCTGTTGAAAACATGGCTGATCACGAAGAACAGTCAGATGGAGATGTATTAAAAGAGCCGGCCATGGCATCAACAAAGGCAGCAGATTCCGAAAACAACAAGCAGGATACTGCAGGCAAGAGCAAGGAGGGTGCAACCAACACAGTACCATATTACAAGCTCTTCTCATTTGCTGATTCCCTGGATTACCTGTTAATGTCTGTTGGTACAATCAGTGCTATCGGAAATGGACTATGTATGCCTCTAATGACCGTGATCATGGGGGAGGTGATCAACTCTTTTGGAGAAACTACGAGTATCAATAAAGTGGTTGGTATAGTTTCCAAGGTGGCTCTCAAGTACGTTTACTTGGCTCTGGGGGCTGCTGCTGCTGCATTTTTACAAATGTCTTGCTGGATGATCACTGGAGAGAGACAGGCATCAAGAATAAGAAGTTTATACTTGAAAACAATACTAAGGCAAGACGTTGGCTTTTTTGATACAGAGGCTAACACTGGGGAAATTGTTGGCAGGATGTCGGGGGATACTGTGCTCATTCAGGAAGCGATGGGGGAGAAAGTAGGAAGTTTTATCCAGTTAGTTGCTACATTCATAGGAGGCTTTGTTATAGCATTTGCCAAGGGATGGCGTCTCACCCTTGTCATGCTAACCTCTATTCCCCCTCTTATCTTATCTGGTGCTGTCATGAGCCTCACTATAAGGAAGTTGGCGTCCCGTGGACAAGAGGCATATTCAGTTGGAGCAACTGTTGTAGAGCAGACAATTGGATCTATCAGAACTGTTGCATCATTTACGGGGGAGAAGCAAGCTATAACCAAGTACAACAACTCCTTAACTAAAGCTTACAAGTCTGGTGTGCAAGAGGGTTTGGCATCAGGGTTGGGTCTTGGTATGGTTGTGCTTGTTGTATTCTGCAGTTATGCTTTGGCTGTATGGTATGGCGGAAAAATGATACTTGAACAGGGATATAAAGCAGGAGATGTCATGAATGTGATTTTTGCTGTATTGACCGGCTCATTCTCTCTTGGGCAGGCATCTCCATGCGTGAGTGCATTTTCTGCTGGACAAGCTGCATCATTTAAGATGTTTGAGACAATTAACAGAAAGCCAGATATAGATGCTTATGACAATAATGGGATGGAATCAGAAGACATTCGTGGAGACATAGAACTTAGGGATGTTTCTTTTAGTTATCCTGCAAGACCGGATGAAAAAATATTCCATGGATTCTCACTCTCAATATCTAGTGGTGCAACTGCTGCTTTGGTTGGACAGAGTGGAAGTGGTAAATCGACTGTAATTAGTTTGATTGAGAGATTTTATGACCCACAGGCTGGTGAAGTTCTTATTGACGGTGTCAATCTCAAAGAGTTCCAGCTGAAATGGATCAGACAGAAAATAGGCCTCGTCAGCCAGGAACCTGTTTTGTTTACTTGCAGCATTAGAGATAATATTGGCTATGGGAAGGATGGTGCAACTACTGAAGAAATAAGGGCTGCTGCTGAGCTTGCCAACGCTGCTAAGTTCATAGACAAACTACCTCAGGGGCTAGATACAATGGTTGGTGAGCATGGAACTCAGCTATCTGGGGGCCAAAAGCAGAGAGTTGCTATAGCCAGAGCAATTTTAAAGAACCCAAAAATTCTTCTTTTAGATGAAGCAACAAGTGCTCTTGATGCAGAATCTGAGAGAGTTGTGCAAGAGGCATTGGACAGAATTATGGTTAGTCGGACTACTGTCATTGTAGCGCACCGCTTGAGCACGGTAAGGAATGCTGATACCATTGCAGTGATACATCATGGAACAATTGTTGAGCAAGGACCACATACTGAGCTAGTTAAGGATCCTGATGGTGCATATAGCCAGCTTATAAGGTTGCAAGAAATTAGCAGAGTGTCCGAACAGAATGCTCAAAATGATCATGAAAGGCCAGAACTTTCTTCAAGTTTTCAAAAACTTCCTTCCTCTCGCTCTATAAGTAGGGGATCATCTGGAAGAGGAAATAGTCGTCGCCTCAGCCACTCATTCTCAATCTCACATGGTGCACCCACCGTGACCGGTGTCCTTGAAATAGAAACTGATATTCCGGCTTCAGCATCATCAGAAGTGCACCCACAAGTCTCACTTAGACGCCTGGCTTACCTGAATAAGCCAGAAATCCCAGTGCTACTCCTAGGTACTATAGCTGCAATAGTCAATGGGTTAACCTTGCCTATTTTCGGGGTGTTGATATCCAGTATAATCAAGACCTTCTTTGAGCCACCTCATCAACTCCGAAAGGATTCTAAGTTTTGGGCATTAATATTTATTGTTCTTGGAGTGGTGTCTCTCTTGGCACAGCCAATGAGAGCATACTTTTTTGCTGTAGCTGGGTGCAAGTTAATAAGACGAGTCCGTTCACTATGCTTTGAGAAGGTGGTTTACATGGAAGTAAGTTGGTTTGATGAAGCTGATCACTCGAGTGGTGCAATTGGTGCAAGGCTTTCGGCAAATGCAGCTTCCCTACGGGGGATGGTTGGAGATGCTCTAGGTTTGGCTGTCATGAATACAACAACTACAATTGCCGGGTTGGTTATTGCTTTTGTGGCAAATTGGCAACTTGCTCTTATAATACTTGTGATGCTGCCTCTACTAGGAATAAGTGGATATTTTCAAGTCGAGTTCCTGAAAGGATTAAGTGCAAATGCAAAGAAAATGTATGAAGATGCAAGCCAAGTAGCCACGGATGCTGTGGGGAGTATTAGAACAATTGCTTCCTTTTGTGCTGAAGAAAAGGTGATCAAGTTGTACCAGACAAAATGTGAAGGCCCTATCAGGAGTGGGATAAGACAAGGGATAGTTAGTGGCATAGGCTTTGGGCTATCATTTTTCTTGCTTTATTCTGTATATGCATGCAGTTTTTATGCTGGCGCTAGACTTGTTGCAGCAGGCAAGACAACATTTCCTAATGTTTTTCGGGTTTTCTTCGCTCTCACTATGACAGCTATTGCATTGACTCAACAGAGTTCTTTAGCCCCGGATGCAAGTAAAGGAAAGAGCTCTGCCGCTTCCATATTTGCAATTCTTGACCGGAAATCCAAGATAGATTCAAGTGATGACTCCGGAACAACAATAGAAAATCTGAAGGGAGAAATTGAGTTTCGCCATGTTAGTTTCAAATATCCGAATAGACCTAATGTGCCCATCTTTCAGGATCTTTGCTTGACCATTCACCATGGCAAGACAGTTGCTCTGGTTGGAGAGAGTGGAAGTGGGAAGTCGACAGTGATCTCATTGTTGCAGCGCTTTTATGATACTGATTCAGGTCAAATTACATTAGATGGTACAGAAATGCAAACATTACAGTTGAAGTGGTTGAGACAGCAAATGGGGCTGGTGAGTCAGGAGCCCCTATTGTTTAATGACACAATCCGAGCCAACATCGCATATGGAAAGGAAGGAGAGGCAACTGAGGCTGAAATTATAGCAGCAGCAGAATTGGCAAATGCTCACAAGTTCATTAGTAGTTTACAACAGGGTTATGACACAATAGTGGGCGAACGAGGTGTTCAACTTTCTGGTGGACAGAAGCAAAGGGTAGCTATTGCAAGAGCTATAATGAAGGCACCAAAGATATTACTACTAGATGAAGCCACCAGTGCTCTTGATGCTGAATCTGAACGAGTGGTTCAAGATGCACTGGACCGAGTTATGGTGGATCGAACTACAGTTGTGGTTGCCCATCGGCTATCCACGATTAAGGGTGCAGATTTAATAGCAGTGGTGAAAAATGGAGTCATTGCAGAAAAAGGAAAGCATGAGACTCTGATCAGTATTGAGGGTGGAACTTACGCTTCTTTGGTATCACTACATGCAAGTACCTCATCTTAG

Protein Analysis

1303

Amino Acids

140.16

Weight (kDa)

6.9

Isoelectric Point (pI)

34.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 81 - 353 3.7e-61 ABC transporter transmembrane region
ABC_tran PF00005 421 - 569 6.3e-34 ABC transporter
ABC_membrane PF00664 736 - 1008 1.4e-56 ABC transporter transmembrane region
ABC_tran PF00005 1077 - 1226 2.5e-34 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1910, 2648
AccB1I GGYRCC 1 cut(s) 3643
AccB7I CCANNNNNTGG 2 cut(s) 663, 1373
AccI GTMKAC 1 cut(s) 3299
AccIII TCCGGA 1 cut(s) 3140
AciI CCGC 3 cut(s) 981, 1792, 3084
AclWI GGATC 7 cut(s) 814, 1433, 1877, 1890, 2032, 3240, 3744
AcoI YGGCCR 1 cut(s) 99
AcsI RAATTY 2 cut(s) 9, 1680
AcuI CTGAAG 4 cut(s) 1542, 2115, 2826, 3182
AcyI GRCGYC 3 cut(s) 667, 749, 2170
AdeI CACNNNGTG 1 cut(s) 2081
AfaI GTAC 8 cut(s) 186, 247, 380, 860, 2218, 2828, 3364, 3898
AfeI AGCGCT 1 cut(s) 3323
AfiI CCNNNNNNNGG 6 cut(s) 663, 1373, 2258, 2547, 2672, 3730
AgeI ACCGGT 1 cut(s) 2096
AjnI CCWGG 3 cut(s) 219, 1452, 2172
AleI CACNNNNGTG 2 cut(s) 2499, 3569
Alw21I GWGCWC 7 cut(s) 573, 1711, 1802, 2086, 2151, 3080, 3682
Alw26I GTCTC 8 cut(s) 445, 674, 1124, 1194, 2164, 2370, 3391, 3833
Alw44I GTGCAC 2 cut(s) 2082, 2147
AlwI GGATC 7 cut(s) 814, 1433, 1877, 1890, 2032, 3240, 3744
AlwNI CAGNNNCTG 1 cut(s) 1724
Ama87I CYCGRG 1 cut(s) 2497
Aor13HI TCCGGA 1 cut(s) 3140
Aor51HI AGCGCT 1 cut(s) 3323
AoxI GGCC 5 cut(s) 99, 1441, 1630, 1967, 2845
ApaLI GTGCAC 2 cut(s) 2082, 2147
ApoI RAATTY 2 cut(s) 9, 1680
AseI ATTAAT 1 cut(s) 2339
AsiGI ACCGGT 1 cut(s) 2096
Asp700I GAANNNNTTC 2 cut(s) 1191, 2320
AspA2I CCTAGG 1 cut(s) 2212
AspLEI GCGC 3 cut(s) 1789, 2951, 3324
AspS9I GGNCC 4 cut(s) 1630, 1859, 2846, 3721
AsuC2I CCSGG 2 cut(s) 2605, 3056
AsuHPI GGTGA 8 cut(s) 319, 664, 1388, 1616, 2827, 3242, 3427, 3814
AvaI CYCGRG 1 cut(s) 2497
AvaII GGWCC 2 cut(s) 1859, 3721
AvrII CCTAGG 1 cut(s) 2212
AxyI CCTNAGG 1 cut(s) 1581
BaeGI GKGCMC 3 cut(s) 2086, 2151, 3222
BaeI ACNNNNGTAYC 2 cut(s) 1584, 1617
BamHI GGATCC 1 cut(s) 1882
BanI GGYRCC 1 cut(s) 3643
BanII GRGCYC 2 cut(s) 3080, 3429
BarI GAAGNNNNNNTAC 2 cut(s) 2444, 2476
BbsI GAAGAC 1 cut(s) 1194
Bbv12I GWGCWC 7 cut(s) 573, 1711, 1802, 2086, 2151, 3080, 3682
BbvCI CCTCAGC 1 cut(s) 2054
BcgI CGANNNNNNTGC 4 cut(s) 1928, 1962, 2505, 2539
BciT130I CCWGG 3 cut(s) 221, 1454, 2174
BciVI GTATCC 2 cut(s) 139, 556
BclI TGATCA 8 cut(s) 58, 294, 309, 438, 1957, 2491, 2817, 3846
BcnI CCSGG 2 cut(s) 2605, 3056
BcoDI GTCTC 8 cut(s) 445, 674, 1124, 1194, 2164, 2370, 3391, 3833
BfaI CTAG 8 cut(s) 1284, 1589, 1874, 2213, 2567, 2672, 2952, 3662
BfmI CTRYAG 6 cut(s) 150, 952, 1650, 2220, 2403, 3744
BfoI RGCGCY 2 cut(s) 2952, 3325
BfuI GTATCC 2 cut(s) 139, 556
BlnI CCTAGG 1 cut(s) 2212
BlpI GCTNAGC 1 cut(s) 1542
Bme1390I CCNGG 5 cut(s) 221, 1454, 2174, 2605, 3056
Bme18I GGWCC 2 cut(s) 1859, 3721
BmeT110I CYCGRG 1 cut(s) 2497
BmgT120I GGNCC 4 cut(s) 1630, 1859, 2846, 3721
BmiI GGNNCC 5 cut(s) 1458, 1631, 1884, 3426, 3645
BmrFI CCNGG 5 cut(s) 221, 1454, 2174, 2605, 3056
BmrI ACTGGG 2 cut(s) 543, 2195
BmuI ACTGGG 2 cut(s) 543, 2195
BoxI GACNNNNGTC 2 cut(s) 1775, 2099
BpiI GAAGAC 1 cut(s) 1194
BpmI CTGGAG 1 cut(s) 465
Bpu10I CCTNAGC 1 cut(s) 2054
Bpu1102I GCTNAGC 1 cut(s) 1542
BpuEI CTTGAG 2 cut(s) 359, 1816
BpuMI CCSGG 2 cut(s) 2605, 3056
BsaHI GRCGYC 3 cut(s) 667, 749, 2170
BsaWI WCCGGW 4 cut(s) 1243, 2096, 3108, 3140
BsaXI ACNNNNNCTCC 6 cut(s) 627, 657, 771, 801, 851, 881
Bsc4I CCNNNNNNNGG 6 cut(s) 663, 1373, 2258, 2547, 2672, 3730
Bse118I RCCGGY 3 cut(s) 97, 1049, 2096
Bse1I ACTGG 7 cut(s) 448, 538, 613, 2201, 2274, 3675, 3723
Bse21I CCTNAGG 1 cut(s) 1581
Bse3DI GCAATG 2 cut(s) 1821, 3816
BseAI TCCGGA 1 cut(s) 3140
BseBI CCWGG 3 cut(s) 221, 1454, 2174
BseLI CCNNNNNNNGG 6 cut(s) 663, 1373, 2258, 2547, 2672, 3730
BseMI GCAATG 2 cut(s) 1821, 3816
BseMII CTCAG 7 cut(s) 1533, 1595, 1631, 1716, 1860, 2068, 3480
BseNI ACTGG 7 cut(s) 448, 538, 613, 2201, 2274, 3675, 3723
BseSI GKGCMC 3 cut(s) 2086, 2151, 3222
BseYI CCCAGC 1 cut(s) 2408
BsgI GTGCAG 1 cut(s) 3804
BshFI GGCC 5 cut(s) 101, 1443, 1632, 1969, 2847
BshNI GGYRCC 1 cut(s) 3643
BshTI ACCGGT 1 cut(s) 2096
BsiHKAI GWGCWC 7 cut(s) 573, 1711, 1802, 2086, 2151, 3080, 3682
BsiHKCI CYCGRG 1 cut(s) 2497
BsiSI CCGG 9 cut(s) 98, 1050, 1244, 2097, 2126, 2604, 3056, 3109, 3141
BslFI GGGAC 1 cut(s) 736
BslI CCNNNNNNNGG 6 cut(s) 663, 1373, 2258, 2547, 2672, 3730
BsmAI GTCTC 8 cut(s) 445, 674, 1124, 1194, 2164, 2370, 3391, 3833
BsmBI CGTCTC 1 cut(s) 674
BsmFI GGGAC 1 cut(s) 736
BsmI GAATGC 2 cut(s) 1816, 1951
BsnI GGCC 5 cut(s) 101, 1443, 1632, 1969, 2847
BsoBI CYCGRG 1 cut(s) 2497
Bsp1286I GDGCHC 9 cut(s) 573, 1711, 1802, 2086, 2151, 3080, 3222, 3429, 3682
Bsp13I TCCGGA 1 cut(s) 3140
Bsp1720I GCTNAGC 1 cut(s) 1542
Bsp19I CCATGG 3 cut(s) 102, 1261, 3253
BspACI CCGC 3 cut(s) 981, 1792, 3084
BspANI GGCC 5 cut(s) 101, 1443, 1632, 1969, 2847
BspCNI CTCAG 7 cut(s) 1534, 1594, 1630, 1717, 1861, 2067, 3481
BspEI TCCGGA 1 cut(s) 3140
BspHI TCATGA 4 cut(s) 723, 1023, 1960, 2580
BspLI GGNNCC 5 cut(s) 1458, 1631, 1884, 3426, 3645
BspMAI CTGCAG 2 cut(s) 154, 956
BspPI GGATC 7 cut(s) 814, 1433, 1877, 1890, 2032, 3240, 3744
BspQI GCTCTTC 1 cut(s) 206
BspT107I GGYRCC 1 cut(s) 3643
BsrDI GCAATG 2 cut(s) 1821, 3816
BsrFI RCCGGY 3 cut(s) 97, 1049, 2096
BsrI ACTGG 7 cut(s) 448, 538, 613, 2201, 2274, 3675, 3723
BssAI RCCGGY 3 cut(s) 97, 1049, 2096
BssNI GRCGYC 3 cut(s) 667, 749, 2170
BssT1I CCWWGG 6 cut(s) 102, 363, 657, 1261, 2212, 3253
Bst2UI CCWGG 3 cut(s) 221, 1454, 2174
Bst6I CTCTTC 2 cut(s) 206, 2029
BstACI GRCGYC 3 cut(s) 667, 749, 2170
BstAPI GCANNNNNTGC 4 cut(s) 1097, 1298, 1706, 2513
BstDSI CCRYGG 5 cut(s) 102, 754, 1261, 2760, 3253
BstENI CCTNNNNNAGG 1 cut(s) 2670
BstH2I RGCGCY 2 cut(s) 2952, 3325
BstHHI GCGC 3 cut(s) 1789, 2951, 3324
BstMAI GTCTC 8 cut(s) 445, 674, 1124, 1194, 2164, 2370, 3391, 3833
BstNI CCWGG 3 cut(s) 221, 1454, 2174
BstNSI RCATGY 2 cut(s) 2934, 3893
BstPAI GACNNNNGTC 2 cut(s) 1775, 2099
BstSCI CCNGG 5 cut(s) 219, 1452, 2172, 2603, 3054
BstSFI CTRYAG 6 cut(s) 150, 952, 1650, 2220, 2403, 3744
BstSLI GKGCMC 3 cut(s) 2086, 2151, 3222
BstV2I GAAGAC 1 cut(s) 1194
BstX2I RGATCY 3 cut(s) 806, 1882, 3232
BstYI RGATCY 3 cut(s) 806, 1882, 3232
Bsu36I CCTNAGG 1 cut(s) 1581
BsuI GTATCC 2 cut(s) 139, 556
BsuRI GGCC 5 cut(s) 101, 1443, 1632, 1969, 2847
BtgI CCRYGG 5 cut(s) 102, 754, 1261, 2760, 3253
BtgZI GCGATG 2 cut(s) 599, 3445
BtsI GCAGTG 2 cut(s) 1833, 3804
BtsIMutI CAGTG 9 cut(s) 259, 441, 531, 1833, 2208, 3309, 3682, 3716, 3804
CaiI CAGNNNCTG 1 cut(s) 1724
CciI TCATGA 4 cut(s) 723, 1023, 1960, 2580
CfoI GCGC 3 cut(s) 1789, 2951, 3324
Cfr10I RCCGGY 3 cut(s) 97, 1049, 2096
Cfr13I GGNCC 4 cut(s) 1630, 1859, 2846, 3721
CseI GACGC 3 cut(s) 656, 738, 2178
Csp6I GTAC 8 cut(s) 185, 246, 379, 859, 2217, 2827, 3363, 3897
CspAI ACCGGT 1 cut(s) 2096
CviQI GTAC 8 cut(s) 185, 246, 379, 859, 2217, 2827, 3363, 3897
DraI TTTAAA 1 cut(s) 1668
DraIII CACNNNGTG 1 cut(s) 2081
EaeI YGGCCR 1 cut(s) 99
Eam1104I CTCTTC 2 cut(s) 206, 2029
EarI CTCTTC 2 cut(s) 206, 2029
EciI GGCGGA 1 cut(s) 996
Ecl136II GAGCTC 1 cut(s) 3078
Eco130I CCWWGG 6 cut(s) 102, 363, 657, 1261, 2212, 3253
Eco147I AGGCCT 1 cut(s) 1443
Eco24I GRGCYC 2 cut(s) 3080, 3429
Eco32I GATATC 1 cut(s) 2271
Eco47I GGWCC 2 cut(s) 1859, 3721
Eco47III AGCGCT 1 cut(s) 3323
Eco53kI GAGCTC 1 cut(s) 3078
Eco57I CTGAAG 4 cut(s) 1542, 2115, 2826, 3182
Eco81I CCTNAGG 1 cut(s) 1581
Eco88I CYCGRG 1 cut(s) 2497
EcoICRI GAGCTC 1 cut(s) 3078
EcoNI CCTNNNNNAGG 1 cut(s) 2670
EcoO109I RGGNCCY 1 cut(s) 2846
EcoRII CCWGG 3 cut(s) 219, 1452, 2172
EcoRV GATATC 1 cut(s) 2271
EcoT14I CCWWGG 6 cut(s) 102, 363, 657, 1261, 2212, 3253
EcoT22I ATGCAT 2 cut(s) 6, 2932
EcoT38I GRGCYC 2 cut(s) 3080, 3429
ErhI CCWWGG 6 cut(s) 102, 363, 657, 1261, 2212, 3253
Esp3I CGTCTC 1 cut(s) 674
FalI AAGNNNNNCTT 4 cut(s) 2148, 2180, 2276, 2308
FaqI GGGAC 1 cut(s) 736
FauNDI CATATG 1 cut(s) 3466
FbaI TGATCA 8 cut(s) 58, 294, 309, 438, 1957, 2491, 2817, 3846
FblI GTMKAC 1 cut(s) 3299
FriOI GRGCYC 2 cut(s) 3080, 3429
FspBI CTAG 8 cut(s) 1284, 1589, 1874, 2213, 2567, 2672, 2952, 3662
GlaI GCGC 3 cut(s) 1788, 2950, 3323
GsaI CCCAGC 1 cut(s) 2412
GsuI CTGGAG 1 cut(s) 465
HaeII RGCGCY 2 cut(s) 2952, 3325
HaeIII GGCC 5 cut(s) 101, 1443, 1632, 1969, 2847
HapII CCGG 9 cut(s) 98, 1050, 1244, 2097, 2126, 2604, 3056, 3109, 3141
HgaI GACGC 3 cut(s) 656, 738, 2178
HhaI GCGC 3 cut(s) 1789, 2951, 3324
Hin1I GRCGYC 3 cut(s) 667, 749, 2170
Hin6I GCGC 3 cut(s) 1787, 2949, 3322
HinP1I GCGC 3 cut(s) 1787, 2949, 3322
HincII GTYRAC 2 cut(s) 2244, 3300
HindII GTYRAC 2 cut(s) 2244, 3300
HindIII AAGCTT 1 cut(s) 879
HpaI GTTAAC 1 cut(s) 2244
HpaII CCGG 9 cut(s) 98, 1050, 1244, 2097, 2126, 2604, 3056, 3109, 3141
HphI GGTGA 8 cut(s) 319, 664, 1388, 1616, 2827, 3242, 3427, 3814
Hpy99I CGWCG 1 cut(s) 2052
HpyAV CCTTC 8 cut(s) 1498, 2010, 2299, 2446, 2837, 3157, 3470, 3634
HpyCH4IV ACGT 2 cut(s) 381, 504
HpySE526I ACGT 2 cut(s) 381, 504
Hsp92I GRCGYC 3 cut(s) 667, 749, 2170
HspAI GCGC 3 cut(s) 1787, 2949, 3322
Kpn2I TCCGGA 1 cut(s) 3140
KroI GCCGGC 1 cut(s) 97
KroNI GCCGGC 1 cut(s) 99
Ksp22I TGATCA 8 cut(s) 58, 294, 309, 438, 1957, 2491, 2817, 3846
KspAI GTTAAC 1 cut(s) 2244
LguI GCTCTTC 1 cut(s) 206
LmnI GCTCC 2 cut(s) 779, 3424
MaeI CTAG 8 cut(s) 1284, 1589, 1874, 2213, 2567, 2672, 2952, 3662
MaeII ACGT 2 cut(s) 381, 504
MaeIII GTNAC 1 cut(s) 2092
MfeI CAATTG 5 cut(s) 801, 1845, 2508, 2598, 2787
MflI RGATCY 3 cut(s) 806, 1882, 3232
MhlI GDGCHC 9 cut(s) 573, 1711, 1802, 2086, 2151, 3080, 3222, 3429, 3682
MlyI GAGTC 6 cut(s) 2439, 3028, 3131, 3427, 3822, 3835
MmeI TCCRAC 5 cut(s) 757, 1288, 1748, 2536, 3256
Mph1103I ATGCAT 2 cut(s) 6, 2932
MroI TCCGGA 1 cut(s) 3140
MroNI GCCGGC 1 cut(s) 97
MroXI GAANNNNTTC 2 cut(s) 1191, 2320
MslI CAYNNNNRTG 5 cut(s) 1028, 1078, 1826, 2499, 3569
MspA1I CMGCKG 1 cut(s) 1417
MspI CCGG 9 cut(s) 98, 1050, 1244, 2097, 2126, 2604, 3056, 3109, 3141
MspR9I CCNGG 5 cut(s) 221, 1454, 2174, 2605, 3056
MunI CAATTG 5 cut(s) 801, 1845, 2508, 2598, 2787
Mva1269I GAATGC 2 cut(s) 1816, 1951
MvaI CCWGG 3 cut(s) 221, 1454, 2174
NaeI GCCGGC 1 cut(s) 99
NciI CCSGG 2 cut(s) 2605, 3056
NcoI CCATGG 3 cut(s) 102, 1261, 3253
NdeI CATATG 1 cut(s) 3466
NgoMIV GCCGGC 1 cut(s) 97
NlaIV GGNNCC 5 cut(s) 1458, 1631, 1884, 3426, 3645
NmuCI GTSAC 1 cut(s) 2092
NsiI ATGCAT 2 cut(s) 6, 2932
NspI RCATGY 2 cut(s) 2934, 3893
OliI CACNNNNGTG 2 cut(s) 2499, 3569
PaeI GCATGC 1 cut(s) 2934
PaeR7I CTCGAG 1 cut(s) 2497
PagI TCATGA 4 cut(s) 723, 1023, 1960, 2580
PceI AGGCCT 1 cut(s) 1443
PciSI GCTCTTC 1 cut(s) 206
PctI GAATGC 2 cut(s) 1816, 1951
PdiI GCCGGC 1 cut(s) 99
PdmI GAANNNNTTC 2 cut(s) 1191, 2320
PfeI GAWTC 9 cut(s) 125, 215, 1181, 1266, 1721, 2321, 3125, 3338, 3692
PflFI GACNNNGTC 1 cut(s) 1394
PflMI CCANNNNNTGG 2 cut(s) 663, 1373
PinAI ACCGGT 1 cut(s) 2096
PleI GAGTC 6 cut(s) 2438, 3028, 3131, 3426, 3821, 3835
PpsI GAGTC 6 cut(s) 2438, 3028, 3131, 3426, 3821, 3835
PshAI GACNNNNGTC 2 cut(s) 1775, 2099
PshBI ATTAAT 1 cut(s) 2339
PsiI TTATAA 2 cut(s) 1910, 2648
Psp124BI GAGCTC 1 cut(s) 3080
Psp6I CCWGG 3 cut(s) 219, 1452, 2172
PspFI CCCAGC 1 cut(s) 2408
PspGI CCWGG 3 cut(s) 219, 1452, 2172
PspN4I GGNNCC 5 cut(s) 1458, 1631, 1884, 3426, 3645
PspPI GGNCC 4 cut(s) 1630, 1859, 2846, 3721
PspXI VCTCGAGB 1 cut(s) 2497
PstI CTGCAG 2 cut(s) 154, 956
PstNI CAGNNNCTG 1 cut(s) 1724
PsuI RGATCY 3 cut(s) 806, 1882, 3232
PsyI GACNNNGTC 1 cut(s) 1394
PvuII CAGCTG 1 cut(s) 1417
RsaI GTAC 8 cut(s) 186, 247, 380, 860, 2218, 2828, 3364, 3898
RsaNI GTAC 8 cut(s) 185, 246, 379, 859, 2217, 2827, 3363, 3897
RseI CAYNNNNRTG 5 cut(s) 1028, 1078, 1826, 2499, 3569
SacI GAGCTC 1 cut(s) 3080
SalI GTCGAC 1 cut(s) 3298
SapI GCTCTTC 1 cut(s) 206
Sau96I GGNCC 4 cut(s) 1630, 1859, 2846, 3721
SchI GAGTC 6 cut(s) 2439, 3028, 3131, 3427, 3822, 3835
ScrFI CCNGG 5 cut(s) 221, 1454, 2174, 2605, 3056
SduI GDGCHC 9 cut(s) 573, 1711, 1802, 2086, 2151, 3080, 3222, 3429, 3682
SfcI CTRYAG 6 cut(s) 150, 952, 1650, 2220, 2403, 3744
Sfr274I CTCGAG 1 cut(s) 2497
SinI GGWCC 2 cut(s) 1859, 3721
SlaI CTCGAG 1 cut(s) 2497
SmiMI CAYNNNNRTG 5 cut(s) 1028, 1078, 1826, 2499, 3569
SmlI CTYRAG 3 cut(s) 374, 1795, 2497
SmoI CTYRAG 3 cut(s) 374, 1795, 2497
SphI GCATGC 1 cut(s) 2934
SseBI AGGCCT 1 cut(s) 1443
SsiI CCGC 3 cut(s) 981, 1792, 3084
SspI AATATT 3 cut(s) 1257, 1492, 2343
SspMI CTAG 8 cut(s) 1284, 1589, 1874, 2213, 2567, 2672, 2952, 3662
SstI GAGCTC 1 cut(s) 3080
StuI AGGCCT 1 cut(s) 1443
StyD4I CCNGG 5 cut(s) 219, 1452, 2172, 2603, 3054
StyI CCWWGG 6 cut(s) 102, 363, 657, 1261, 2212, 3253
TaiI ACGT 2 cut(s) 384, 507
TaqI TCGA 5 cut(s) 1331, 2498, 2697, 3299, 3739
TaqII GACCGA 1 cut(s) 3738
TatI WGTACW 1 cut(s) 858
TauI GCSGC 1 cut(s) 3086
TfiI GAWTC 9 cut(s) 125, 215, 1181, 1266, 1721, 2321, 3125, 3338, 3692
TscAI CASTG 9 cut(s) 259, 448, 538, 1833, 2208, 3309, 3682, 3723, 3804
TseFI GTSAC 1 cut(s) 2092
Tsp45I GTSAC 1 cut(s) 2092
TspGWI ACGGA 2 cut(s) 2423, 2777
TspRI CASTG 9 cut(s) 259, 448, 538, 1833, 2208, 3309, 3682, 3723, 3804
Tth111I GACNNNGTC 1 cut(s) 1394
Van91I CCANNNNNTGG 2 cut(s) 663, 1373
VneI GTGCAC 2 cut(s) 2082, 2147
VpaK11BI GGWCC 2 cut(s) 1859, 3721
VspI ATTAAT 1 cut(s) 2339
XagI CCTNNNNNAGG 1 cut(s) 2670
XapI RAATTY 2 cut(s) 9, 1680
XceI RCATGY 2 cut(s) 2934, 3893
XcmI CCANNNNNNNNNTGG 1 cut(s) 2767
XhoI CTCGAG 1 cut(s) 2497
XmaJI CCTAGG 1 cut(s) 2212
XmiI GTMKAC 1 cut(s) 3299
XmnI GAANNNNTTC 2 cut(s) 1191, 2320
XspI CTAG 8 cut(s) 1284, 1589, 1874, 2213, 2567, 2672, 2952, 3662
Zsp2I ATGCAT 2 cut(s) 6, 2932
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.