AT2G47000

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0000116
Physical Location & Seq
Reverse (-)
19309643 .. 19315343
5701 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G47000.4

Sequence Viewer

Length: 3861 bp
ATGGCTTCAGAGAGCGGCTTAAATGGAGATCCAAATATACTAGAAGAGGTTTCTGAGACCAAAAGAGACAAGGAAGAAGAAGAAGAAGTGAAGAAAACAGAGAAGAAAGACGAGGAACATGAGAAAACCAAAACGGTGCCGTTTTATAAGCTCTTTGCTTTTGCAGATTCCTTTGATTTCCTCTTGATGATCCTCGGGACGCTTGGATCTATTGGAAATGGTCTTGGCTTCCCTCTTATGACCTTACTGTTCGGAGATCTCATTGATGCTTTTGGAGAGAATCAGACTAATACAACAGACAAAGTCTCCAAAGTTGCTCTGAAGTTTGTATGGCTTGGAATCGGTACTTTCGCAGCTGCTTTTCTCCAATTGTCTGGCTGGATGATTTCTGGAGAGAGACAAGCAGCGAGAATAAGGAGTTTGTATCTAAAGACAATCTTAAGACAAGATATAGCCTTTTTCGACATCGATACAAATACAGGAGAAGTTGTTGGAAGAATGTCCGGTGACACTGTGCTAATCCAAGATGCCATGGGAGAAAAGGTGGGAAAAGCTATACAACTTCTAGCAACATTTGTAGGAGGCTTTGTGATAGCTTTCGTAAGAGGATGGCTTCTAACGTTGGTCATGTTATCTTCAATTCCTCTACTTGTAATGGCTGGTGCACTTCTGGCTATCGTCATTGCTAAAACAGCTTCTCGTGGACAAACTGCTTACGCCAAAGCTGCCACTGTAGTTGAGCAAACAATTGGTTCTATAAGAACGGTTGCATCATTTACAGGAGAGAAACAAGCGATAAGCAATTACAATAAACATCTTGTCACTGCTTATAAAGCAGGAGTCATTGAAGGTGGTTCAACTGGATTGGGTCTTGGAACGCTCTTTCTTGTAGTCTTTTGTAGCTACGCTTTAGCAGTATGGTATGGAGGAAAGTTGATATTGGATAAAGGCTACACAGGAGGACAAGTTCTCAATATCATCATCGCTGTTTTAACTGGATCCATGTCGTTAGGTCAAACATCGCCTTGCTTAAGCGCATTTGCAGCTGGACAAGCCGCGGCTTACAAGATGTTTGAGACAATTGAGAGAAGACCTAACATAGATTCTTATAGTACAAATGGTAAAGTTTTGGATGACATTAAGGGAGATATTGAGCTCAAAGATGTTTACTTTACTTACCCAGCGAGACCCGATGAGCAAATATTTCGCGGATTCTCTCTGTTTATCTCGAGTGGTACAACGGTGGCTTTAGTTGGACAAAGTGGGAGCGGGAAATCTACTGTTGTGAGTCTGATTGAGAGGTTTTACGATCCACAAGCTGGTGACGTTCTCATAGATGGTATTAACTTAAAAGAGTTTCAGCTAAAATGGATTAGAAGCAAGATTGGACTTGTGAGTCAAGAACCAGTTTTGTTCACTGCAAGCATCAAGGATAACATTGCGTACGGCAAAGAAGACGCAACAACCGAAGAGATTAAAGCAGCTGCAGAGCTAGCAAACGCATCTAAATTTGTGGATAAGCTACCACAGGGTTTGGATACAATGGTTGGAGAACATGGTACTCAGCTTTCCGGTGGACAAAAACAGAGAATCGCGGTGGCTAGAGCAATCTTAAAAGATCCAAGAATCTTACTTTTAGATGAAGCTACAAGCGCGCTTGATGCAGAATCTGAGAGAGTGGTTCAAGAAGCGCTTGATAGAATTATGGTTAACCGGACTACTGTTGTGGTCGCTCATCGGTTAAGCACTGTGCGAAATGCGGATATGATCGCTGTGATCCACCAAGGCAAGATCGTCGAGAAAGGTTCTCACACGGAACTACTAAAGGACCCGGAAGGAGCTTATTCTCAGCTGATTCGTCTACAAGAAGAGAAGAAATCTGATGAGAATGCAGCGGAGGAGCAAAAGATGTCATCAATTGAATCATTCAAACAATCTAGTCTGAGAAAATCGTCTCTAGGCCGGTCTCTAAGCAAAGGAGGATCATCCAGAGGAAACAGCAGCCGCCATTCTTTCAATATGTTTGGTTTTCCAGCAGGAATTGACGGAAACGTCGTTCAAGATCAAGAAGAGGATGATACTACACAACCAAAAACCGAACCAAAAAAAGTCTCCATTTTCAGAATTGCTGCTCTAAACAAACCAGAGATTCCGGTGCTAATACTTGGATCAATATCCGCAGCAGCAAATGGCGTTATCCTTCCAATCTTTGGCATACTAATCTCCAGCGTAATCAAAGCGTTTTTCCAACCACCTAAAAAGCTAAAAGAAGATACAAGCTTCTGGGCAATCATATTCATGGTTCTTGGTTTCGCATCCATCATTGCATACCCAGCACAAACCTTCTTCTTTGCCATAGCTGGATGTAAACTAGTGCAGAGGATCAGAAGTATGTGTTTTGAGAAAGTGGTTCACATGGAAGTTGGATGGTTCGACGAGCCAGAGAATTCTAGTGGAACCATAGGAGCAAGGCTATCAGCAGATGCTGCCACAATCCGTGGTCTAGTTGGAGACTCTTTGGCTCAGACAGTTCAGAATCTTTCATCTATATTGGCTGGTTTGATCATTGCATTTTTGGCTTGTTGGCAATTAGCTTTCGTGGTCCTCGCGATGCTCCCGCTTATCGCACTCAATGGATTTCTTTATATGAAGTTCATGAAAGGTTTCAGCGCTGATGCAAAGAAAATGTACGGGGAAGCAAGCCAAGTAGCGAATGACGCGGTAGGGAGCATAAGAACCGTTGCTTCATTCTGTGCAGAAGACAAGGTGATGAACATGTACTCAAAGAAATGTGAAGGTCCAATGAAGAATGGGATTCGTCAAGGCATAGTCAGTGGTATTGGTTTCGGCTTCTCTTTCTTCGTCCTCTTCTCTTCTTACGCTGCCAGTTTCTACGTTGGAGCACGCCTTGTCGATGATGGCAAAACAACCTTCGACTCTGTTTTCAGGGTTTTCTTTGCTTTGACAATGGCGGCAATGGCGATATCTCAATCGAGTTCGTTATCTCCAGATTCCAGCAAAGCCGATGTAGCTGCTGCCTCGATTTTCGCAATAATGGACAGGGAATCAAAGATTGACCCAAGTGTGGAATCAGGAAGAGTGTTGGATAATGTTAAAGGAGACATTGAGCTTCGTCATGTTAGTTTCAAATACCCAGCAAGACCAGATGTTCAAATCTTCCAAGACCTCTGTCTAAGCATTCGAGCTGGAAAGACAGTTGCTTTGGTTGGAGAAAGCGGTAGCGGGAAATCAACGGTGATTGCATTGTTGCAGAGGTTTTACGATCCAGATTCAGGTGAGATCACTCTTGACGGTGTAGAGATCAAGAGCCTAAGACTAAAATGGCTAAGACAACAAACGGGACTTGTGAGCCAAGAACCAATCTTGTTCAACGAGACAATTAGAGCCAACATTGCTTATGGCAAAGGAGGAGACGCGAGTGAATCCGAAATCGTATCTTCAGCTGAATTATCAAACGCCCATGGATTCATCAGTGGTCTGCAACAGGGTTATGATACGATGGTGGGAGAAAGAGGAATTCAATTATCAGGCGGACAAAAGCAACGAGTAGCTATAGCCAGAGCCATCGTCAAAGATCCAAAGGTGTTGCTGCTCGACGAAGCCACGAGTGCTCTTGACGCTGAGTCTGAGCGTGTGGTTCAGGACGCGCTAGACCGTGTTATGGTAAACCGGACTACGATTGTGGTAGCTCACCGGTTATCGACGATTAAGAATGCTGACGTAATTGCCGTCGTTAAGAACGGCGTCATCGTTGAGAAAGGAAAGCACGACACGTTGATCAATATCAAAGACGGAGTTTATGCTTCGTTAGTTCAGCTTCATCTAACCGCGGCTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005911 GO:0006810 GO:0006855 GO:0007275 GO:0008150 GO:0008559 GO:0009506 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009735 GO:0009888 GO:0009914 GO:0009926 GO:0009966 GO:0009987 GO:0010015 GO:0010033 GO:0010053 GO:0010054 GO:0010315 GO:0010328 GO:0010329 GO:0010540 GO:0010646 GO:0010817 GO:0010928 GO:0015238 GO:0015399 GO:0015405 GO:0015562 GO:0015893 GO:0016020 GO:0016049 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0021700 GO:0022622 GO:0022804 GO:0022857 GO:0023051 GO:0030054 GO:0030154 GO:0031090 GO:0032501 GO:0032502 GO:0040007 GO:0042221 GO:0042493 GO:0042623 GO:0042626 GO:0042908 GO:0042910 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048583 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0060560 GO:0060918 GO:0060919 GO:0065007 GO:0065008 GO:0071695 GO:0071944 GO:0080147 GO:0080161 GO:0090558 GO:0090627 GO:0098588 GO:0098805 GO:0099402 GO:1905392
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1286

Amino Acids

139.03

Weight (kDa)

6.16

Isoelectric Point (pI)

36.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 63 - 335 9e-60 ABC transporter transmembrane region
ABC_tran PF00005 404 - 551 8.4e-32 ABC transporter
ABC_membrane PF00664 720 - 993 2.2e-62 ABC transporter transmembrane region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 147, 831
AasI GACNNNNNNGTC 2 cut(s) 1395, 2051
AccB1I GGYRCC 1 cut(s) 136
AccB7I CCANNNNNTGG 2 cut(s) 1319, 2210
AccBSI CCGCTC 2 cut(s) 15, 1269
AccI GTMKAC 1 cut(s) 1861
AccII CGCG 9 cut(s) 1058, 1209, 1595, 1655, 2609, 2720, 3437, 3668, 3851
AclI AACGTT 1 cut(s) 620
AcsI RAATTY 3 cut(s) 1508, 2446, 3537
AcuI CTGAAG 2 cut(s) 341, 3444
AcyI GRCGYC 1 cut(s) 3765
AfaI GTAC 7 cut(s) 346, 1114, 1237, 1445, 1561, 2690, 2780
AfeI AGCGCT 2 cut(s) 1692, 2671
AfiI CCNNNNNNNGG 5 cut(s) 1319, 2210, 3085, 3293, 3682
AflII CTTAAG 2 cut(s) 439, 1030
AflIII ACRYGT 2 cut(s) 2775, 3792
AgeI ACCGGT 1 cut(s) 3714
AhdI GACNNNNNGTC 1 cut(s) 3643
AhlI ACTAGT 1 cut(s) 2371
AloI GAACNNNNNNTCC 4 cut(s) 951, 983, 2040, 2072
Alw21I GWGCWC 4 cut(s) 667, 1158, 2905, 3634
Alw44I GTGCAC 1 cut(s) 663
AlwNI CAGNNNCTG 2 cut(s) 1670, 2486
Ama87I CYCGRG 2 cut(s) 194, 1228
Aor51HI AGCGCT 2 cut(s) 1692, 2671
AoxI GGCC 1 cut(s) 1960
ApaLI GTGCAC 1 cut(s) 663
ApoI RAATTY 3 cut(s) 1508, 2446, 3537
ArsI GACNNNNNNTTYG 2 cut(s) 3205, 3237
AsiGI ACCGGT 1 cut(s) 3714
Asp700I GAANNNNTTC 1 cut(s) 2663
AspLEI GCGC 6 cut(s) 1037, 1655, 1657, 1693, 2672, 3670
AspS9I GGNCC 3 cut(s) 1828, 2602, 2798
AsuC2I CCSGG 1 cut(s) 1832
AsuHPI GGTGA 6 cut(s) 518, 1334, 2779, 3268, 3308, 3704
AsuNHI GCTAGC 1 cut(s) 1492
AvaI CYCGRG 2 cut(s) 194, 1228
AvaII GGWCC 3 cut(s) 1828, 2602, 2798
BaeGI GKGCMC 1 cut(s) 667
BaeI ACNNNNGTAYC 6 cut(s) 1227, 1260, 1530, 1563, 3507, 3540
BamHI GGATCC 1 cut(s) 998
BanI GGYRCC 1 cut(s) 136
BanII GRGCYC 1 cut(s) 1158
BauI CACGAG 2 cut(s) 699, 3625
BbsI GAAGAC 3 cut(s) 1096, 1461, 2766
Bbv12I GWGCWC 4 cut(s) 667, 1158, 2905, 3634
BccI CCATC 7 cut(s) 603, 1331, 2327, 2421, 2912, 3514, 3593
BceAI ACGGC 4 cut(s) 124, 1462, 3734, 3778
BcgI CGANNNNNNTGC 6 cut(s) 1187, 1221, 1777, 1811, 3014, 3048
BciVI GTATCC 1 cut(s) 1531
BclI TGATCA 2 cut(s) 2562, 3798
BcnI CCSGG 1 cut(s) 1832
BcuI ACTAGT 1 cut(s) 2371
BfmI CTRYAG 3 cut(s) 732, 1485, 3573
BfoI RGCGCY 2 cut(s) 1694, 2673
BfrI CTTAAG 2 cut(s) 439, 1030
BfuI GTATCC 1 cut(s) 1531
BglII AGATCT 1 cut(s) 256
Bme1390I CCNGG 1 cut(s) 1832
Bme18I GGWCC 3 cut(s) 1828, 2602, 2798
BmeRI GACNNNNNGTC 1 cut(s) 3643
BmeT110I CYCGRG 2 cut(s) 194, 1228
BmgT120I GGNCC 3 cut(s) 1828, 2602, 2798
BmiI GGNNCC 4 cut(s) 138, 1000, 1830, 2458
BmrFI CCNGG 1 cut(s) 1832
BmtI GCTAGC 1 cut(s) 1496
BoxI GACNNNNGTC 1 cut(s) 3189
BpiI GAAGAC 3 cut(s) 1096, 1461, 2766
BpmI CTGGAG 3 cut(s) 411, 2209, 2991
BpuMI CCSGG 1 cut(s) 1832
Bsa29I ATCGAT 1 cut(s) 468
BsaBI GATNNNNATC 2 cut(s) 2173, 3803
BsaHI GRCGYC 1 cut(s) 3765
BsaI GGTCTC 3 cut(s) 50, 1180, 1971
BsaJI CCNNGG 7 cut(s) 193, 531, 1056, 1783, 2497, 3481, 3849
BsaWI WCCGGW 6 cut(s) 503, 1571, 1713, 2152, 3690, 3714
Bsc4I CCNNNNNNNGG 5 cut(s) 1319, 2210, 3085, 3293, 3682
Bse118I RCCGGY 2 cut(s) 1962, 3714
Bse1I ACTGG 4 cut(s) 865, 1000, 1406, 2886
Bse3DI GCAATG 6 cut(s) 681, 1437, 2322, 2565, 2982, 3411
Bse8I GATNNNNATC 2 cut(s) 2173, 3803
BseCI ATCGAT 1 cut(s) 468
BseDI CCNNGG 7 cut(s) 193, 531, 1056, 1783, 2497, 3481, 3849
BseGI GGATG 8 cut(s) 387, 614, 1138, 1985, 2080, 2315, 2369, 2432
BseJI GATNNNNATC 2 cut(s) 2173, 3803
BseLI CCNNNNNNNGG 5 cut(s) 1319, 2210, 3085, 3293, 3682
BseMI GCAATG 6 cut(s) 681, 1437, 2322, 2565, 2982, 3411
BseMII CTCAG 8 cut(s) 45, 1577, 1662, 1862, 1934, 2537, 3633, 3639
BseNI ACTGG 4 cut(s) 865, 1000, 1406, 2886
BsePI GCGCGC 1 cut(s) 1653
BseRI GAGGAG 2 cut(s) 1913, 3444
BseSI GKGCMC 1 cut(s) 667
BseYI CCCAGC 3 cut(s) 1180, 2332, 3154
BsgI GTGCAG 2 cut(s) 2396, 2775
Bsh1236I CGCG 9 cut(s) 1058, 1209, 1595, 1655, 2609, 2720, 3437, 3668, 3851
BshFI GGCC 1 cut(s) 1962
BshNI GGYRCC 1 cut(s) 136
BshTI ACCGGT 1 cut(s) 3714
BshVI ATCGAT 1 cut(s) 468
BsiHKAI GWGCWC 4 cut(s) 667, 1158, 2905, 3634
BsiHKCI CYCGRG 2 cut(s) 194, 1228
BsiSI CCGG 8 cut(s) 504, 1572, 1714, 1832, 1963, 2153, 3691, 3715
BsiWI CGTACG 1 cut(s) 1443
BslFI GGGAC 2 cut(s) 211, 3375
BslI CCNNNNNNNGG 5 cut(s) 1319, 2210, 3085, 3293, 3682
BsmBI CGTCTC 2 cut(s) 1959, 3426
BsmFI GGGAC 2 cut(s) 211, 3375
BsmI GAATGC 3 cut(s) 1894, 3198, 3739
BsnI GGCC 1 cut(s) 1962
Bso31I GGTCTC 3 cut(s) 50, 1180, 1971
BsoBI CYCGRG 2 cut(s) 194, 1228
Bsp1286I GDGCHC 4 cut(s) 667, 1158, 2905, 3634
Bsp19I CCATGG 2 cut(s) 531, 3481
Bsp68I TCGCGA 1 cut(s) 2609
BspANI GGCC 1 cut(s) 1962
BspCNI CTCAG 8 cut(s) 46, 1576, 1663, 1861, 1935, 2536, 3634, 3640
BspDI ATCGAT 1 cut(s) 468
BspFNI CGCG 9 cut(s) 1058, 1209, 1595, 1655, 2609, 2720, 3437, 3668, 3851
BspHI TCATGA 1 cut(s) 2655
BspLI GGNNCC 4 cut(s) 138, 1000, 1830, 2458
BspMAI CTGCAG 1 cut(s) 1489
BspOI GCTAGC 1 cut(s) 1496
BspT107I GGYRCC 1 cut(s) 136
BspTI CTTAAG 2 cut(s) 439, 1030
BspTNI GGTCTC 3 cut(s) 50, 1180, 1971
BsrBI CCGCTC 2 cut(s) 15, 1269
BsrDI GCAATG 6 cut(s) 681, 1437, 2322, 2565, 2982, 3411
BsrFI RCCGGY 2 cut(s) 1962, 3714
BsrI ACTGG 4 cut(s) 865, 1000, 1406, 2886
BssAI RCCGGY 2 cut(s) 1962, 3714
BssECI CCNNGG 7 cut(s) 193, 531, 1056, 1783, 2497, 3481, 3849
BssHII GCGCGC 1 cut(s) 1653
BssNI GRCGYC 1 cut(s) 3765
BssSI CACGAG 2 cut(s) 699, 3625
BssT1I CCWWGG 3 cut(s) 531, 1783, 3481
Bst2BI CACGAG 2 cut(s) 699, 3625
Bst6I CTCTTC 7 cut(s) 39, 1464, 1863, 2064, 2873, 2878, 3091
BstACI GRCGYC 1 cut(s) 3765
BstAFI CTTAAG 2 cut(s) 439, 1030
BstAPI GCANNNNNTGC 1 cut(s) 2486
BstC8I GCNNGC 5 cut(s) 1423, 1494, 1655, 2701, 2905
BstDSI CCRYGG 5 cut(s) 531, 1056, 2497, 3481, 3849
BstF5I GGATG 8 cut(s) 387, 614, 1138, 1985, 2080, 2315, 2369, 2432
BstFNI CGCG 9 cut(s) 1058, 1209, 1595, 1655, 2609, 2720, 3437, 3668, 3851
BstH2I RGCGCY 2 cut(s) 1694, 2673
BstHHI GCGC 6 cut(s) 1037, 1655, 1657, 1693, 2672, 3670
BstNSI RCATGY 1 cut(s) 2779
BstPAI GACNNNNGTC 1 cut(s) 3189
BstSCI CCNGG 1 cut(s) 1830
BstSFI CTRYAG 3 cut(s) 732, 1485, 3573
BstSLI GKGCMC 1 cut(s) 667
BstUI CGCG 9 cut(s) 1058, 1209, 1595, 1655, 2609, 2720, 3437, 3668, 3851
BstV2I GAAGAC 3 cut(s) 1096, 1461, 2766
BstX2I RGATCY 6 cut(s) 28, 206, 256, 998, 1618, 3595
BstXI CCANNNNNNTGG 1 cut(s) 374
BstYI RGATCY 6 cut(s) 28, 206, 256, 998, 1618, 3595
Bsu15I ATCGAT 1 cut(s) 468
BsuI GTATCC 1 cut(s) 1531
BsuRI GGCC 1 cut(s) 1962
BsuTUI ATCGAT 1 cut(s) 468
BtgI CCRYGG 5 cut(s) 531, 1056, 2497, 3481, 3849
BtgZI GCGATG 3 cut(s) 967, 1005, 2624
BtsCI GGATG 8 cut(s) 387, 614, 1138, 1985, 2080, 2315, 2369, 2432
BtsI GCAGTG 2 cut(s) 822, 1416
BtsIMutI CAGTG 7 cut(s) 510, 729, 822, 1416, 1746, 2839, 3499
BtuMI TCGCGA 1 cut(s) 2609
Cac8I GCNNGC 5 cut(s) 1423, 1494, 1655, 2701, 2905
CaiI CAGNNNCTG 2 cut(s) 1670, 2486
CciI TCATGA 1 cut(s) 2655
CfoI GCGC 6 cut(s) 1037, 1655, 1657, 1693, 2672, 3670
Cfr10I RCCGGY 2 cut(s) 1962, 3714
Cfr13I GGNCC 3 cut(s) 1828, 2602, 2798
Cfr42I CCGCGG 2 cut(s) 1059, 3852
ClaI ATCGAT 1 cut(s) 468
CseI GACGC 7 cut(s) 208, 1466, 2726, 3443, 3647, 3674, 3754
Csp6I GTAC 7 cut(s) 345, 1113, 1236, 1444, 1560, 2689, 2779
CspAI ACCGGT 1 cut(s) 3714
CspCI CAANNNNNGTGG 4 cut(s) 718, 753, 1515, 1550
CviQI GTAC 7 cut(s) 345, 1113, 1236, 1444, 1560, 2689, 2779
DrdI GACNNNNNNGTC 2 cut(s) 1395, 2051
DriI GACNNNNNGTC 1 cut(s) 3643
DseDI GACNNNNNNGTC 2 cut(s) 1395, 2051
Eam1104I CTCTTC 7 cut(s) 39, 1464, 1863, 2064, 2873, 2878, 3091
Eam1105I GACNNNNNGTC 1 cut(s) 3643
EarI CTCTTC 7 cut(s) 39, 1464, 1863, 2064, 2873, 2878, 3091
EciI GGCGGA 1 cut(s) 3567
Ecl136II GAGCTC 1 cut(s) 1156
Eco130I CCWWGG 3 cut(s) 531, 1783, 3481
Eco24I GRGCYC 1 cut(s) 1158
Eco31I GGTCTC 3 cut(s) 50, 1180, 1971
Eco32I GATATC 1 cut(s) 2985
Eco47I GGWCC 3 cut(s) 1828, 2602, 2798
Eco47III AGCGCT 2 cut(s) 1692, 2671
Eco53kI GAGCTC 1 cut(s) 1156
Eco57I CTGAAG 2 cut(s) 341, 3444
Eco88I CYCGRG 2 cut(s) 194, 1228
EcoICRI GAGCTC 1 cut(s) 1156
EcoO109I RGGNCCY 1 cut(s) 1828
EcoRI GAATTC 2 cut(s) 2446, 3537
EcoRV GATATC 1 cut(s) 2985
EcoT14I CCWWGG 3 cut(s) 531, 1783, 3481
EcoT38I GRGCYC 1 cut(s) 1158
ErhI CCWWGG 3 cut(s) 531, 1783, 3481
Esp3I CGTCTC 2 cut(s) 1959, 3426
FalI AAGNNNNNCTT 4 cut(s) 422, 454, 1677, 1709
FaqI GGGAC 2 cut(s) 211, 3375
FauI CCCGC 3 cut(s) 1262, 2625, 3236
FbaI TGATCA 2 cut(s) 2562, 3798
FblI GTMKAC 1 cut(s) 1861
FokI GGATG 8 cut(s) 394, 621, 1145, 1972, 2087, 2302, 2376, 2439
FriOI GRGCYC 1 cut(s) 1158
GlaI GCGC 6 cut(s) 1036, 1654, 1656, 1692, 2671, 3669
GsaI CCCAGC 3 cut(s) 1184, 2336, 3158
GsuI CTGGAG 3 cut(s) 411, 2209, 2991
HaeII RGCGCY 2 cut(s) 1694, 2673
HaeIII GGCC 1 cut(s) 1962
HapII CCGG 8 cut(s) 504, 1572, 1714, 1832, 1963, 2153, 3691, 3715
HgaI GACGC 7 cut(s) 208, 1466, 2726, 3443, 3647, 3674, 3754
HhaI GCGC 6 cut(s) 1037, 1655, 1657, 1693, 2672, 3670
Hin1I GRCGYC 1 cut(s) 3765
Hin6I GCGC 6 cut(s) 1035, 1653, 1655, 1691, 2670, 3668
HinP1I GCGC 6 cut(s) 1035, 1653, 1655, 1691, 2670, 3668
HincII GTYRAC 1 cut(s) 1711
HindII GTYRAC 1 cut(s) 1711
HindIII AAGCTT 1 cut(s) 2278
HpaI GTTAAC 1 cut(s) 1711
HpaII CCGG 8 cut(s) 504, 1572, 1714, 1832, 1963, 2153, 3691, 3715
HphI GGTGA 6 cut(s) 518, 1334, 2779, 3268, 3308, 3704
Hpy99I CGWCG 6 cut(s) 1799, 2057, 2438, 3620, 3727, 3755
HpyAV CCTTC 6 cut(s) 842, 1829, 2210, 2353, 2789, 2941
HpyCH4IV ACGT 6 cut(s) 620, 1326, 2052, 2895, 3741, 3794
HpySE526I ACGT 6 cut(s) 620, 1326, 2052, 2895, 3741, 3794
Hsp92I GRCGYC 1 cut(s) 3765
HspAI GCGC 6 cut(s) 1035, 1653, 1655, 1691, 2670, 3668
Ksp22I TGATCA 2 cut(s) 2562, 3798
KspAI GTTAAC 1 cut(s) 1711
KspI CCGCGG 2 cut(s) 1059, 3852
LmnI GCTCC 7 cut(s) 1266, 1838, 1900, 2465, 2619, 2727, 2900
MaeII ACGT 6 cut(s) 620, 1326, 2052, 2895, 3741, 3794
MaeIII GTNAC 3 cut(s) 506, 820, 1322
MbiI CCGCTC 2 cut(s) 15, 1269
MfeI CAATTG 4 cut(s) 368, 747, 1080, 1917
MflI RGATCY 6 cut(s) 28, 206, 256, 998, 1618, 3595
MhlI GDGCHC 4 cut(s) 667, 1158, 2905, 3634
MlyI GAGTC 6 cut(s) 849, 1297, 1405, 2507, 2930, 3653
MmeI TCCRAC 9 cut(s) 472, 1234, 1528, 2272, 2404, 2488, 2878, 3084, 3208
MroXI GAANNNNTTC 1 cut(s) 2663
MslI CAYNNNNRTG 1 cut(s) 2297
MspA1I CMGCKG 8 cut(s) 356, 1046, 1058, 1484, 1852, 1895, 3464, 3851
MspCI CTTAAG 2 cut(s) 439, 1030
MspI CCGG 8 cut(s) 504, 1572, 1714, 1832, 1963, 2153, 3691, 3715
MspR9I CCNGG 1 cut(s) 1832
MunI CAATTG 4 cut(s) 368, 747, 1080, 1917
Mva1269I GAATGC 3 cut(s) 1894, 3198, 3739
MvnI CGCG 9 cut(s) 1058, 1209, 1595, 1655, 2609, 2720, 3437, 3668, 3851
NciI CCSGG 1 cut(s) 1832
NcoI CCATGG 2 cut(s) 531, 3481
NheI GCTAGC 1 cut(s) 1492
NlaIV GGNNCC 4 cut(s) 138, 1000, 1830, 2458
NmuCI GTSAC 3 cut(s) 506, 820, 1322
NruI TCGCGA 1 cut(s) 2609
NspI RCATGY 1 cut(s) 2779
PaeR7I CTCGAG 1 cut(s) 1228
PagI TCATGA 1 cut(s) 2655
PauI GCGCGC 1 cut(s) 1653
PciI ACATGT 1 cut(s) 2775
PcsI WCGNNNNNNNCGW 4 cut(s) 1464, 2052, 3747, 3768
PctI GAATGC 3 cut(s) 1894, 3198, 3739
PdmI GAANNNNTTC 1 cut(s) 2663
Pfl23II CGTACG 1 cut(s) 1443
PflFI GACNNNGTC 1 cut(s) 302
PflMI CCANNNNNTGG 2 cut(s) 1319, 2210
PinAI ACCGGT 1 cut(s) 3714
PleI GAGTC 6 cut(s) 848, 1296, 1404, 2507, 2930, 3652
PpsI GAGTC 6 cut(s) 848, 1296, 1404, 2507, 2930, 3652
PpuMI RGGWCCY 1 cut(s) 1828
PscI ACATGT 1 cut(s) 2775
PshAI GACNNNNGTC 1 cut(s) 3189
PsiI TTATAA 2 cut(s) 147, 831
Psp124BI GAGCTC 1 cut(s) 1158
Psp1406I AACGTT 1 cut(s) 620
Psp5II RGGWCCY 1 cut(s) 1828
PspFI CCCAGC 3 cut(s) 1180, 2332, 3154
PspLI CGTACG 1 cut(s) 1443
PspN4I GGNNCC 4 cut(s) 138, 1000, 1830, 2458
PspPI GGNCC 3 cut(s) 1828, 2602, 2798
PspPPI RGGWCCY 1 cut(s) 1828
PstI CTGCAG 1 cut(s) 1489
PstNI CAGNNNCTG 2 cut(s) 1670, 2486
PsuI RGATCY 6 cut(s) 28, 206, 256, 998, 1618, 3595
PsyI GACNNNGTC 1 cut(s) 302
PteI GCGCGC 1 cut(s) 1653
PvuII CAGCTG 5 cut(s) 356, 1046, 1484, 1852, 3464
RruI TCGCGA 1 cut(s) 2609
RsaI GTAC 7 cut(s) 346, 1114, 1237, 1445, 1561, 2690, 2780
RsaNI GTAC 7 cut(s) 345, 1113, 1236, 1444, 1560, 2689, 2779
RseI CAYNNNNRTG 1 cut(s) 2297
SacI GAGCTC 1 cut(s) 1158
SacII CCGCGG 2 cut(s) 1059, 3852
Sau96I GGNCC 3 cut(s) 1828, 2602, 2798
SchI GAGTC 6 cut(s) 849, 1297, 1405, 2507, 2930, 3653
ScrFI CCNGG 1 cut(s) 1832
SduI GDGCHC 4 cut(s) 667, 1158, 2905, 3634
SfcI CTRYAG 3 cut(s) 732, 1485, 3573
Sfr274I CTCGAG 1 cut(s) 1228
Sfr303I CCGCGG 2 cut(s) 1059, 3852
SgrBI CCGCGG 2 cut(s) 1059, 3852
SinI GGWCC 3 cut(s) 1828, 2602, 2798
SlaI CTCGAG 1 cut(s) 1228
SmiMI CAYNNNNRTG 1 cut(s) 2297
SmlI CTYRAG 3 cut(s) 439, 1030, 1228
SmoI CTYRAG 3 cut(s) 439, 1030, 1228
SpeI ACTAGT 1 cut(s) 2371
SspI AATATT 1 cut(s) 1203
SstI GAGCTC 1 cut(s) 1158
StyD4I CCNGG 1 cut(s) 1830
StyI CCWWGG 3 cut(s) 531, 1783, 3481
TaiI ACGT 6 cut(s) 623, 1329, 2055, 2898, 3744, 3797
TatI WGTACW 2 cut(s) 1112, 2778
TauI GCSGC 6 cut(s) 18, 1058, 1061, 2007, 2975, 3854
TscAI CASTG 7 cut(s) 517, 736, 829, 1423, 1753, 2839, 3499
TseFI GTSAC 3 cut(s) 506, 820, 1322
Tsp45I GTSAC 3 cut(s) 506, 820, 1322
TspGWI ACGGA 4 cut(s) 1829, 2061, 2486, 3828
TspRI CASTG 7 cut(s) 517, 736, 829, 1423, 1753, 2839, 3499
Tth111I GACNNNGTC 1 cut(s) 302
Van91I CCANNNNNTGG 2 cut(s) 1319, 2210
Vha464I CTTAAG 2 cut(s) 439, 1030
VneI GTGCAC 1 cut(s) 663
VpaK11BI GGWCC 3 cut(s) 1828, 2602, 2798
XapI RAATTY 3 cut(s) 1508, 2446, 3537
XceI RCATGY 1 cut(s) 2779
XhoI CTCGAG 1 cut(s) 1228
XmiI GTMKAC 1 cut(s) 1861
XmnI GAANNNNTTC 1 cut(s) 2663
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.