Rh4AG276600

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0000116
Physical Location & Seq
Forward (+)
59302127 .. 59306757
4631 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG276600.1

Sequence Viewer

Length: 3477 bp
ATGTCTTGCTGGATGATCACTGGAGAGAGACAGGCTGCACGAATACGAAGTCTATACTTGAAAACCATATTGAGGCAAGATGTTGGGTATTTTGATAAAGAAATCAACTCTGGGGAAATTGTTGGGAGGATGTCAGGTGATACTGTGCTTATTCAAGAGGCAATGGGCGAGAAGGTAGGGAGTTTCATTCAGTTAGTTGCAACGTTCATTGGGGGCTTTGGAATAGCATTTACTAAGGGATGGCTTCTCACCCTTGTCATGCTATCCTCTATTCCTCCTGTTGTCTTCACTACTGCTGTCTTGAACCATTTCATGGTGAAATTGGCGTCCCGTGGACAAGCTGCATATTCAGAAGGGGCTACTGTTGTAGAGGAGACAATTGGTTCAATCAGAACTGTTGCATCATTCACTGGGGAGAAGCAGGCCATATCTAACTACAATGCCTCCTTAACTAAGGCTTACAAGTCGGCTGTGCAAGAGGGTTGGGCATCTGGTTTGGGTTTTGGTGCAGCTATGCTCATGGTATTCTGTACTTACGCTTTGGCTGTATGGTTTGGCGGAATAATGATACTTGAAAAAGGATATAGAGGAGGAGATGTCATGAATGTAATTGTTGCTGTCTTGATTGGCTCTGTGTCTCTTGGGAAAGCATCTCCGTGCATTAGTGCATTTGCTCCTGGACAAGCTGCGGCTTATAAGATGTTTGAGACAATTAAAAGAAAGCCGGAGATAGATGTATATGACACTAAAGGGCGAGTGTTACAAGATATTCGTGGAGACATAGAACTGAGGGATGTTGATTTTAGTTATCCCTCACGACCGGATGAGCAGATACTACATGGATTTTGTCTCTCAATACCTAGTGGAGCAACTGCTGCTTTGGTTGGACAGAGTGGAAGTGGTAAATCGACTATAATCAGTTTGATTGAGAGATTCTATGACCCACAGGCTGGTGAAGTTCTTATTGATGGTGTTAATCTCAAAGAGTTCCAACTGAAATGGATCAGACAGAAAATAGGCCTCGTGAGCCAGGAACCAGTTTTGTTTACTGGTAGCATTAAAGATAACATTGCCTATGGAAAGGATGGTGCAACTACTGAAGAAATAAAGGCTGCCGCTGAGCTTGCCAATGCTGCAAAATTCATAGATTTACTGCCTCAGGGAATAGACACAATGGTTGGTGAGCATGGAACTCAGCTATCTGGGGGACAAAAGCAAAGAGTTGCTATAGCTAGAGCAATTCTGAAGAACCCAAAAATCCTACTGTTAGATGAAGCCACAAGCGCTCTTGACACAAAATCTGAGAAAATTGTGCAGGAGGCACTGGACAGAGTAATGATTAACCGTACTACTGTCATTGTAGCCCACCGCTTGAGCACAGTGAGGAATGCTGACACCATTGTTGTAATACATCAAGGAACGATTGCTGAAAAAGGACCGCATTGGGAGCTAATTAGGGATCCTGATGGAGCATATAGCCAGCTTATAAGGTTGCAAGAAACCCGTATTGTGTCAGAACATACTGGTCTAAATGTTCATGATTCTTTATCACAATTCATAAGTGCAGAATCTCCAAGAACAAACAGTAGATCATCTCCAAGAAGAAATAGTAGTCCTATCTCATTCGCACTCTCATTTGGTATTCCTACCGCAAGCAGTATGCTTGAAACAGCACCTGTAGAACCTGATGTTCCTGCTTCAGCACTATCAAAAGGGCCTCCCAAAGTCTCACTTCAACGACTGGCTTACCTGAACAAGCCGGAGATCCCAGTTCTATTTCTAGGTACACTAGCTGCAGCAGTCAACGGGGTAATCTTCCCTATTTTTGGGAGTTTGATGGCAAGTGTAATCAAAACGTTCTTTGAGCCACCTCATGAACTCCGTAAAGATTCAAAGTTTTGGGCATTAATGTTTTTGCTTCTTGGAATGACATCTTTATTGGCTAGTCCAGCAAGAGCATACCTTTTTGCTGTGGCAGGATGTAGGCTAATCAAACGAATCCGAGCCATGTGCTTTGAGAAGGTGGTTTACATGGAAGTAAGTTGGTTTGATGAAGCTGAACACTCAAGTGGTGCCATTGGCGCAAGGCTTTCTACAGATGCAGCATCTTTAAGAGGGCTGGTTGGAGATGTTCTAGGTTTGGTTGTTGAGAACATGGCAACTGCAATTTCTGGGCTGATCATTGCTTTTGTTGCAAATTGGCAACTGGCTCTTATAATCCTTGTTCTGTTTCCTTTATTAGGACTAAATGGATATTTACAAGTCCAGTTCATGAAAGGATTCAGTGAAGATGCCAAGAAAATGTATGAAGATGCGAGCCAAATAGCCAATGATGCTGTGGGGAGTATTCGGACAATTGCTTCCTTTTGTGCTGAAGAGAAGGTGATTGAATTGTACCAGAAAAAATTTGAAGGCCCTGTTAAGGCAGGGATAAGACAAGGGTTAGTTACAGGGATAGGTTTTGGGCTATCACTATTTTTGCAGTTTTCAGTGTTTGCCTTAAGCTTTTATACTGGAGGTCTACTTGTTGGGGCAGGCAAGACAACATTCTCTGCTGTTTTCCAGGTTTTCTTTGCTCTCACTATGACTTCTATTGGACTTGCTCAAGCGACCTCCCTAGCACCTGATGCAAGTAAAGGAAGGGCCTCTGCTGCTTCCATATTCGCAATTCTTGACCGGAAATCAAAAATAGACTCTAGTGATAACTCTGGGATGACTATAGAACACTTGAAGGGAGAAATTGAATTTCACCATGTCAGTTTCAAGTATCCCAGTAGACCTGACGTGCATATTTTCAACAATCTTCGCTTGACCATTAGTCATGGCAAGACAATTGCTCTGGTTGGTGAAAGTGGAAGTGGGAAATCAACAGTGATCTCATTGATTCTAAGATTTTACAATCCTAATTCAGGTCACATTACATTGGATGGAATCAAAATCCAAAAACTGCAATTGAAATGGTTGAGGCAGCAAATGGGGCTGGTGAGCCAGGAGCCTCTGCTGTTTAACGACACTATCCGAGCCAACATTGCATATGGAAAGGATGGAGAGGCAACCGAGGCTGACATTACAGCTGCTGCAGAACTCGCAAATGCACACCAGTTCATTAGTAGTTTACAACATGGTTACGATACAATAACTGGTGAGCGAGGGGTCCAATTGTCCGGCGGACAGAAGCAAAGAATTGCTATTGCACGGGCTATTATGAAGGCACCAAAGATATTACTACTAGATGAAGCCACAAGTGCCCTTGATGCTGAATCTGAACGTGTGGTTCAAGATGCATTGGACCGAATTATGGTGGATCGGACAACAATCGTGGTTGCTCACCGGTTATCCACAATTAAGGGTGCAGATTTAATTGCTGTGGTCAAAAATGGAGTCATTGCAGAGAAAGGAAAGCATGGAACTTTGATCAATATCAGCAATGGCATTTATGCTTCTTTGGTAGCTTTACATGCAAGCGCCTCATCTTAG

Protein Analysis

1158

Amino Acids

124.95

Weight (kDa)

8.58

Isoelectric Point (pI)

31.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 2 - 212 6.5e-50 ABC transporter transmembrane region
ABC_tran PF00005 280 - 428 3.4e-33 ABC transporter
ABC_membrane PF00664 592 - 864 6.5e-58 ABC transporter transmembrane region
ABC_tran PF00005 932 - 1082 1.4e-34 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 696, 1487, 2216
AccB1I GGYRCC 2 cut(s) 2072, 3211
AccB7I CCANNNNNTGG 2 cut(s) 313, 950
AccI GTMKAC 2 cut(s) 2521, 2776
AciI CCGC 7 cut(s) 558, 689, 1116, 1369, 1439, 1650, 3168
AclI AACGTT 2 cut(s) 203, 1856
AclWI GGATC 5 cut(s) 1010, 1454, 1467, 1759, 3312
AcsI RAATTY 3 cut(s) 1139, 2405, 2744
AcuI CTGAAG 4 cut(s) 1119, 1265, 1683, 2394
AcyI GRCGYC 1 cut(s) 326
AfaI GTAC 4 cut(s) 532, 1348, 1786, 2396
AfeI AGCGCT 1 cut(s) 1285
AfiI CCNNNNNNNGG 8 cut(s) 72, 313, 950, 1826, 2240, 2422, 2909, 3298
AflII CTTAAG 1 cut(s) 2500
AflIII ACRYGT 1 cut(s) 3268
AgeI ACCGGT 1 cut(s) 3330
AhdI GACNNNNNGTC 1 cut(s) 2817
AjiI CACGTC 1 cut(s) 2785
AjnI CCWGG 4 cut(s) 676, 1029, 2562, 2988
AleI CACNNNNGTG 1 cut(s) 2067
Alw21I GWGCWC 1 cut(s) 1379
Alw26I GTCTC 7 cut(s) 22, 368, 642, 701, 771, 854, 1732
AlwI GGATC 5 cut(s) 1010, 1454, 1467, 1759, 3312
AlwNI CAGNNNCTG 2 cut(s) 1676, 3077
Aor51HI AGCGCT 1 cut(s) 1285
AoxI GGCC 5 cut(s) 423, 1018, 1715, 2413, 2643
ApoI RAATTY 3 cut(s) 1139, 2405, 2744
ArsI GACNNNNNNTTYG 4 cut(s) 34, 66, 3366, 3398
AseI ATTAAT 1 cut(s) 1907
AsiGI ACCGGT 1 cut(s) 3330
Asp700I GAANNNNTTC 2 cut(s) 308, 2279
AspLEI GCGC 3 cut(s) 1286, 2084, 3467
AspS9I GGNCC 6 cut(s) 1436, 1715, 2414, 2643, 3154, 3289
AvaII GGWCC 3 cut(s) 1436, 3154, 3289
AxyI CCTNAGG 1 cut(s) 1158
BaeGI GKGCMC 1 cut(s) 3250
BamHI GGATCC 1 cut(s) 1459
BanI GGYRCC 2 cut(s) 2072, 3211
BarI GAAGNNNNNNTAC 2 cut(s) 2012, 2044
BauI CACGAG 1 cut(s) 1022
BbsI GAAGAC 1 cut(s) 277
Bbv12I GWGCWC 1 cut(s) 1379
BccI CCATC 7 cut(s) 234, 962, 1079, 1460, 1831, 2921, 3038
BcgI CGANNNNNNTGC 2 cut(s) 1992, 2026
BciT130I CCWGG 4 cut(s) 678, 1031, 2564, 2990
BciVI GTATCC 1 cut(s) 2778
BclI TGATCA 3 cut(s) 15, 2178, 3414
BcoDI GTCTC 7 cut(s) 22, 368, 642, 701, 771, 854, 1732
BfaI CTAG 9 cut(s) 861, 1233, 1781, 1790, 1944, 2135, 2618, 2697, 3230
BfmI CTRYAG 6 cut(s) 1227, 1677, 1794, 2094, 2718, 3078
BfoI RGCGCY 2 cut(s) 1287, 3468
BfrI CTTAAG 1 cut(s) 2500
BfuI GTATCC 1 cut(s) 2778
BlpI GCTNAGC 1 cut(s) 1119
Bme1390I CCNGG 4 cut(s) 678, 1031, 2564, 2990
Bme18I GGWCC 3 cut(s) 1436, 3154, 3289
BmeRI GACNNNNNGTC 1 cut(s) 2817
BmgBI CACGTC 1 cut(s) 2785
BmgT120I GGNCC 6 cut(s) 1436, 1715, 2414, 2643, 3154, 3289
BmiI GGNNCC 6 cut(s) 1035, 1461, 2074, 2994, 3155, 3213
BmrFI CCNGG 4 cut(s) 678, 1031, 2564, 2990
BmrI ACTGGG 3 cut(s) 420, 1763, 2766
BmuI ACTGGG 3 cut(s) 420, 1763, 2766
BpiI GAAGAC 1 cut(s) 277
BpmI CTGGAG 2 cut(s) 42, 2535
Bpu1102I GCTNAGC 1 cut(s) 1119
BpuEI CTTGAG 3 cut(s) 1393, 2050, 2589
BsaBI GATNNNNATC 1 cut(s) 3419
BsaHI GRCGYC 1 cut(s) 326
BsaJI CCNNGG 2 cut(s) 331, 3057
BsaWI WCCGGW 3 cut(s) 820, 2676, 3330
BsaXI ACNNNNNCTCC 4 cut(s) 428, 458, 582, 612
Bsc4I CCNNNNNNNGG 8 cut(s) 72, 313, 950, 1826, 2240, 2422, 2909, 3298
Bse118I RCCGGY 1 cut(s) 3330
Bse21I CCTNAGG 1 cut(s) 1158
Bse3DI GCAATG 6 cut(s) 168, 1068, 2181, 3027, 3384, 3433
Bse8I GATNNNNATC 1 cut(s) 3419
BseBI CCWGG 4 cut(s) 678, 1031, 2564, 2990
BseDI CCNNGG 2 cut(s) 331, 3057
BseJI GATNNNNATC 1 cut(s) 3419
BseLI CCNNNNNNNGG 8 cut(s) 72, 313, 950, 1826, 2240, 2422, 2909, 3298
BseMI GCAATG 6 cut(s) 168, 1068, 2181, 3027, 3384, 3433
BseMII CTCAG 5 cut(s) 779, 1110, 1172, 1208, 1293
BseRI GAGGAG 3 cut(s) 386, 603, 606
BseSI GKGCMC 1 cut(s) 3250
BsgI GTGCAG 5 cut(s) 21, 528, 1334, 1584, 3372
Bsh1285I CGRYCG 1 cut(s) 821
BshFI GGCC 5 cut(s) 425, 1020, 1717, 2415, 2645
BshNI GGYRCC 2 cut(s) 2072, 3211
BshTI ACCGGT 1 cut(s) 3330
BsiEI CGRYCG 1 cut(s) 821
BsiHKAI GWGCWC 1 cut(s) 1379
BsiSI CCGG 6 cut(s) 725, 821, 1760, 2677, 3165, 3331
BslFI GGGAC 2 cut(s) 313, 1221
BslI CCNNNNNNNGG 8 cut(s) 72, 313, 950, 1826, 2240, 2422, 2909, 3298
BsmAI GTCTC 7 cut(s) 22, 368, 642, 701, 771, 854, 1732
BsmFI GGGAC 2 cut(s) 313, 1221
BsmI GAATGC 1 cut(s) 1393
BsnI GGCC 5 cut(s) 425, 1020, 1717, 2415, 2645
Bsp1286I GDGCHC 2 cut(s) 1379, 3250
Bsp143I GATC 9 cut(s) 15, 1002, 1459, 1589, 1764, 2178, 2874, 3304, 3414
Bsp1720I GCTNAGC 1 cut(s) 1119
BspACI CCGC 7 cut(s) 558, 689, 1116, 1369, 1439, 1650, 3168
BspANI GGCC 5 cut(s) 425, 1020, 1717, 2415, 2645
BspCNI CTCAG 5 cut(s) 780, 1111, 1171, 1207, 1294
BspHI TCATGA 4 cut(s) 600, 1537, 1873, 2271
BspLI GGNNCC 6 cut(s) 1035, 1461, 2074, 2994, 3155, 3213
BspMAI CTGCAG 2 cut(s) 1798, 3082
BspPI GGATC 5 cut(s) 1010, 1454, 1467, 1759, 3312
BspT107I GGYRCC 2 cut(s) 2072, 3211
BspTI CTTAAG 1 cut(s) 2500
BsrDI GCAATG 6 cut(s) 168, 1068, 2181, 3027, 3384, 3433
BsrFI RCCGGY 1 cut(s) 3330
BssAI RCCGGY 1 cut(s) 3330
BssECI CCNNGG 2 cut(s) 331, 3057
BssMI GATC 9 cut(s) 15, 1002, 1459, 1589, 1764, 2178, 2874, 3304, 3414
BssNI GRCGYC 1 cut(s) 326
BssSI CACGAG 1 cut(s) 1022
Bst2BI CACGAG 1 cut(s) 1022
Bst2UI CCWGG 4 cut(s) 678, 1031, 2564, 2990
Bst4CI ACNGT 9 cut(s) 145, 364, 397, 1266, 1346, 1354, 1381, 1586, 2872
Bst6I CTCTTC 1 cut(s) 2370
BstACI GRCGYC 1 cut(s) 326
BstAFI CTTAAG 1 cut(s) 2500
BstAPI GCANNNNNTGC 2 cut(s) 875, 2627
BstC8I GCNNGC 7 cut(s) 423, 1125, 1481, 1654, 2317, 2536, 3463
BstDEI CTNAG 9 cut(s) 234, 453, 788, 1119, 1158, 1194, 1302, 2888, 3474
BstDSI CCRYGG 1 cut(s) 331
BstENI CCTNNNNNAGG 2 cut(s) 2238, 2907
BstH2I RGCGCY 2 cut(s) 1287, 3468
BstHHI GCGC 3 cut(s) 1286, 2084, 3467
BstKTI GATC 9 cut(s) 18, 1005, 1462, 1592, 1767, 2181, 2877, 3307, 3417
BstMAI GTCTC 7 cut(s) 22, 368, 642, 701, 771, 854, 1732
BstMBI GATC 9 cut(s) 15, 1002, 1459, 1589, 1764, 2178, 2874, 3304, 3414
BstMCI CGRYCG 1 cut(s) 821
BstNI CCWGG 4 cut(s) 678, 1031, 2564, 2990
BstNSI RCATGY 1 cut(s) 3461
BstSCI CCNGG 4 cut(s) 676, 1029, 2562, 2988
BstSFI CTRYAG 6 cut(s) 1227, 1677, 1794, 2094, 2718, 3078
BstSLI GKGCMC 1 cut(s) 3250
BstV2I GAAGAC 1 cut(s) 277
BstX2I RGATCY 2 cut(s) 1459, 1764
BstYI RGATCY 2 cut(s) 1459, 1764
Bsu36I CCTNAGG 1 cut(s) 1158
BsuI GTATCC 1 cut(s) 2778
BsuRI GGCC 5 cut(s) 425, 1020, 1717, 2415, 2645
BtgI CCRYGG 1 cut(s) 331
BtrI CACGTC 1 cut(s) 2785
BtsIMutI CAGTG 7 cut(s) 18, 408, 1322, 1386, 2290, 2496, 2877
Cac8I GCNNGC 7 cut(s) 423, 1125, 1481, 1654, 2317, 2536, 3463
CaiI CAGNNNCTG 2 cut(s) 1676, 3077
CciI TCATGA 4 cut(s) 600, 1537, 1873, 2271
CfoI GCGC 3 cut(s) 1286, 2084, 3467
Cfr10I RCCGGY 1 cut(s) 3330
Cfr13I GGNCC 6 cut(s) 1436, 1715, 2414, 2643, 3154, 3289
CseI GACGC 1 cut(s) 315
Csp6I GTAC 4 cut(s) 531, 1347, 1785, 2395
CspAI ACCGGT 1 cut(s) 3330
CspCI CAANNNNNGTGG 2 cut(s) 3300, 3335
CviQI GTAC 4 cut(s) 531, 1347, 1785, 2395
DdeI CTNAG 9 cut(s) 234, 453, 788, 1119, 1158, 1194, 1302, 2888, 3474
DpnI GATC 9 cut(s) 17, 1004, 1461, 1591, 1766, 2180, 2876, 3306, 3416
DpnII GATC 9 cut(s) 15, 1002, 1459, 1589, 1764, 2178, 2874, 3304, 3414
DriI GACNNNNNGTC 1 cut(s) 2817
Eam1104I CTCTTC 1 cut(s) 2370
Eam1105I GACNNNNNGTC 1 cut(s) 2817
EarI CTCTTC 1 cut(s) 2370
EciI GGCGGA 2 cut(s) 573, 3183
Eco147I AGGCCT 1 cut(s) 1020
Eco47I GGWCC 3 cut(s) 1436, 3154, 3289
Eco47III AGCGCT 1 cut(s) 1285
Eco57I CTGAAG 4 cut(s) 1119, 1265, 1683, 2394
Eco81I CCTNAGG 1 cut(s) 1158
EcoNI CCTNNNNNAGG 2 cut(s) 2238, 2907
EcoO109I RGGNCCY 3 cut(s) 1715, 2414, 2643
EcoRII CCWGG 4 cut(s) 676, 1029, 2562, 2988
EcoT22I ATGCAT 1 cut(s) 3286
FalI AAGNNNNNCTT 2 cut(s) 1716, 1748
FaqI GGGAC 2 cut(s) 313, 1221
FauNDI CATATG 1 cut(s) 3034
FbaI TGATCA 3 cut(s) 15, 2178, 3414
FblI GTMKAC 2 cut(s) 2521, 2776
FspBI CTAG 9 cut(s) 861, 1233, 1781, 1790, 1944, 2135, 2618, 2697, 3230
GlaI GCGC 3 cut(s) 1285, 2083, 3466
GsuI CTGGAG 2 cut(s) 42, 2535
HaeII RGCGCY 2 cut(s) 1287, 3468
HaeIII GGCC 5 cut(s) 425, 1020, 1717, 2415, 2645
HapII CCGG 6 cut(s) 725, 821, 1760, 2677, 3165, 3331
HgaI GACGC 1 cut(s) 315
HhaI GCGC 3 cut(s) 1286, 2084, 3467
Hin1I GRCGYC 1 cut(s) 326
Hin6I GCGC 3 cut(s) 1284, 2082, 3465
HinP1I GCGC 3 cut(s) 1284, 2082, 3465
HincII GTYRAC 1 cut(s) 1804
HindII GTYRAC 1 cut(s) 1804
HindIII AAGCTT 1 cut(s) 2503
HpaII CCGG 6 cut(s) 725, 821, 1760, 2677, 3165, 3331
Hpy166II GTNNAC 8 cut(s) 335, 1047, 1787, 1804, 2029, 2522, 2777, 3116
Hpy8I GTNNAC 8 cut(s) 335, 1047, 1787, 1804, 2029, 2522, 2777, 3116
HpyAV CCTTC 8 cut(s) 166, 347, 2014, 2374, 2405, 2634, 2725, 3202
HpyCH4III ACNGT 9 cut(s) 145, 364, 397, 1266, 1346, 1354, 1381, 1586, 2872
HpyCH4IV ACGT 4 cut(s) 203, 1856, 2784, 3268
HpyF3I CTNAG 9 cut(s) 234, 453, 788, 1119, 1158, 1194, 1302, 2888, 3474
HpySE526I ACGT 4 cut(s) 203, 1856, 2784, 3268
Hsp92I GRCGYC 1 cut(s) 326
HspAI GCGC 3 cut(s) 1284, 2082, 3465
Ksp22I TGATCA 3 cut(s) 15, 2178, 3414
Kzo9I GATC 9 cut(s) 15, 1002, 1459, 1589, 1764, 2178, 2874, 3304, 3414
LmnI GCTCC 5 cut(s) 679, 866, 1447, 1469, 2992
MaeI CTAG 9 cut(s) 861, 1233, 1781, 1790, 1944, 2135, 2618, 2697, 3230
MaeII ACGT 4 cut(s) 203, 1856, 2784, 3268
MaeIII GTNAC 4 cut(s) 759, 2446, 2912, 3125
MalI GATC 9 cut(s) 17, 1004, 1461, 1591, 1766, 2180, 2876, 3306, 3416
MboI GATC 9 cut(s) 15, 1002, 1459, 1589, 1764, 2178, 2874, 3304, 3414
MboII GAAGA 9 cut(s) 277, 1112, 1258, 1614, 1807, 2300, 2321, 2387, 2795
MfeI CAATTG 5 cut(s) 378, 2355, 2832, 2951, 3158
MflI RGATCY 2 cut(s) 1459, 1764
MhlI GDGCHC 2 cut(s) 1379, 3250
MlyI GAGTC 2 cut(s) 2687, 3390
MmeI TCCRAC 3 cut(s) 865, 1015, 2104
Mph1103I ATGCAT 1 cut(s) 3286
MroXI GAANNNNTTC 2 cut(s) 308, 2279
MslI CAYNNNNRTG 2 cut(s) 655, 2067
MspA1I CMGCKG 2 cut(s) 1118, 3074
MspCI CTTAAG 1 cut(s) 2500
MspI CCGG 6 cut(s) 725, 821, 1760, 2677, 3165, 3331
MspR9I CCNGG 4 cut(s) 678, 1031, 2564, 2990
MunI CAATTG 5 cut(s) 378, 2355, 2832, 2951, 3158
Mva1269I GAATGC 1 cut(s) 1393
MvaI CCWGG 4 cut(s) 678, 1031, 2564, 2990
NdeI CATATG 1 cut(s) 3034
NdeII GATC 9 cut(s) 15, 1002, 1459, 1589, 1764, 2178, 2874, 3304, 3414
NlaIV GGNNCC 6 cut(s) 1035, 1461, 2074, 2994, 3155, 3213
NmuCI GTSAC 1 cut(s) 2912
NsiI ATGCAT 1 cut(s) 3286
NspI RCATGY 1 cut(s) 3461
OliI CACNNNNGTG 1 cut(s) 2067
PagI TCATGA 4 cut(s) 600, 1537, 1873, 2271
PceI AGGCCT 1 cut(s) 1020
PctI GAATGC 1 cut(s) 1393
PdmI GAANNNNTTC 2 cut(s) 308, 2279
PfeI GAWTC 9 cut(s) 933, 1541, 1568, 1889, 1998, 2280, 2884, 2931, 3260
PflMI CCANNNNNTGG 2 cut(s) 313, 950
PfoI TCCNGGA 1 cut(s) 676
PinAI ACCGGT 1 cut(s) 3330
PleI GAGTC 2 cut(s) 2687, 3389
PpsI GAGTC 2 cut(s) 2687, 3389
PshBI ATTAAT 1 cut(s) 1907
PsiI TTATAA 3 cut(s) 696, 1487, 2216
Psp1406I AACGTT 2 cut(s) 203, 1856
Psp6I CCWGG 4 cut(s) 676, 1029, 2562, 2988
PspGI CCWGG 4 cut(s) 676, 1029, 2562, 2988
PspN4I GGNNCC 6 cut(s) 1035, 1461, 2074, 2994, 3155, 3213
PspPI GGNCC 6 cut(s) 1436, 1715, 2414, 2643, 3154, 3289
PstI CTGCAG 2 cut(s) 1798, 3082
PstNI CAGNNNCTG 2 cut(s) 1676, 3077
PsuI RGATCY 2 cut(s) 1459, 1764
PvuII CAGCTG 1 cut(s) 3074
RsaI GTAC 4 cut(s) 532, 1348, 1786, 2396
RsaNI GTAC 4 cut(s) 531, 1347, 1785, 2395
RseI CAYNNNNRTG 2 cut(s) 655, 2067
Sau3AI GATC 9 cut(s) 15, 1002, 1459, 1589, 1764, 2178, 2874, 3304, 3414
Sau96I GGNCC 6 cut(s) 1436, 1715, 2414, 2643, 3154, 3289
SchI GAGTC 2 cut(s) 2687, 3390
ScrFI CCNGG 4 cut(s) 678, 1031, 2564, 2990
SduI GDGCHC 2 cut(s) 1379, 3250
SfcI CTRYAG 6 cut(s) 1227, 1677, 1794, 2094, 2718, 3078
SinI GGWCC 3 cut(s) 1436, 3154, 3289
SmiMI CAYNNNNRTG 2 cut(s) 655, 2067
SmlI CTYRAG 4 cut(s) 1372, 2065, 2500, 2604
SmoI CTYRAG 4 cut(s) 1372, 2065, 2500, 2604
SseBI AGGCCT 1 cut(s) 1020
SsiI CCGC 7 cut(s) 558, 689, 1116, 1369, 1439, 1650, 3168
SspMI CTAG 9 cut(s) 861, 1233, 1781, 1790, 1944, 2135, 2618, 2697, 3230
StuI AGGCCT 1 cut(s) 1020
StyD4I CCNGG 4 cut(s) 676, 1029, 2562, 2988
TaaI ACNGT 9 cut(s) 145, 364, 397, 1266, 1346, 1354, 1381, 1586, 2872
TaiI ACGT 4 cut(s) 206, 1859, 2787, 3271
TaqI TCGA 1 cut(s) 908
TaqII GACCGA 1 cut(s) 3306
TatI WGTACW 1 cut(s) 530
TauI GCSGC 2 cut(s) 692, 1118
TfiI GAWTC 9 cut(s) 933, 1541, 1568, 1889, 1998, 2280, 2884, 2931, 3260
TscAI CASTG 7 cut(s) 25, 415, 1329, 1386, 2290, 2496, 2877
TseFI GTSAC 1 cut(s) 2912
Tsp45I GTSAC 1 cut(s) 2912
TspGWI ACGGA 2 cut(s) 645, 1871
TspRI CASTG 7 cut(s) 25, 415, 1329, 1386, 2290, 2496, 2877
Van91I CCANNNNNTGG 2 cut(s) 313, 950
Vha464I CTTAAG 1 cut(s) 2500
VpaK11BI GGWCC 3 cut(s) 1436, 3154, 3289
VspI ATTAAT 1 cut(s) 1907
XagI CCTNNNNNAGG 2 cut(s) 2238, 2907
XapI RAATTY 3 cut(s) 1139, 2405, 2744
XceI RCATGY 1 cut(s) 3461
XcmI CCANNNNNNNNNTGG 1 cut(s) 2335
XmiI GTMKAC 2 cut(s) 2521, 2776
XmnI GAANNNNTTC 2 cut(s) 308, 2279
XspI CTAG 9 cut(s) 861, 1233, 1781, 1790, 1944, 2135, 2618, 2697, 3230
Zsp2I ATGCAT 1 cut(s) 3286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.