AT4G01820

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
780646 .. 785340
4695 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G01820.2

Sequence Viewer

Length: 3690 bp
ATGGAAGAAAAGACAAAGACCGTACCGTTCTACAAATTGTTTTCCTTCTCAGATTCTACCGATGTGTTGTTGATGATCGTTGGTTCGATCGGAGCTATAGGAAACGGTGTTGGTTTTCCTTTAATGACATTATTGTTTGGTGATCTCATTGATTCTATTGGTCAGAACCAGAGCAACAAAGACATTGTTGAGATAGTCTCCAAGGTCTGTTTGAAATTTGTCTACCTTGGACTTGGGACACTAGGAGCAGCATTTCTTCAGGTGGCTTGTTGGATGATTACTGGGGAAAGACAAGCTGCAAGGATAAGGAGTTTGTATCTGAAAACGATTCTAAGACAAGACATTGGATTCTTCGATGTCGAAACGAGCACCGGAGAAGTTGTTGGTCGAATGTCCGGTGATACTGTTCTTATACTAGAAGCTATGGGTGAGAAGGTTGGGAAGTTTATCCAGTTGATTGCAACATTTGTGGGTGGATTTGTTTTAGCGTTTGTGAAAGGATGGTTACTTACACTTGTTATGTTAGTTTCAATTCCTCTTCTAGCTATAGCTGGTGCAGCTATGCCGATTATAGTTACTAGAGCTTCTTCTCGTGAACAAGCTGCTTATGCAAAAGCATCGACTGTTGTTGAACAAACTTTGGGGTCTATTCGAACCGTTGCTTCTTTCACGGGAGAGAAGCAAGCGATGAAAAGCTACAGAGAATTTATAAATTTAGCCTATCGAGCGAGTGTTAAGCAAGGTTTCTCTATGGGGTTAGGTCTTGGAGTAGTGTTTTTTGTGTTCTTTTGCAGCTATGCTTTAGCTATATGGTTTGGTGGAGAAATGATACTTAAAAAAGGGTATACAGGTGGGGAAGTGGTTAATGTAATGGTCACTGTGGTCGCAAGTTCGATGTCTTTAGGGCAAACAACACCTTGTCTAACCGCATTTGCGGCTGGTAAAGCTGCAGCTTATAAGATGTTTGAAACGATCGAAAGAAAGCCGTCGATTGATGCTTTTGATCTAAATGGTAAGGTCTTAGAAGATATCCGAGGCGAAATCGAGCTGCGAGATGTGTGTTTTAGTTACCCTGCGAGACCTATGGAAGAGGTTTTTGGCGGATTCTCGCTGTTGATTCCGAGTGGTGCAACCGCTGCTCTGGTAGGGGAAAGCGGGAGTGGGAAATCTTCTGTGATCAGTTTGATAGAAAGATTTTATGATCCAAGTTCCGGCAGTGTGCTTATTGATGGTGTTAACTTAAAGGAGTTTCAGTTGAAATGGATTAGGGGAAAGATTGGATTGGTTAGTCAAGAACCTGTTCTGTTTTCTTCAAGTATAATGGAGAATATCGGCTACGGAAAAGAGAACGCAACAGTTGAAGAGATTCAAGCAGCGGCAAAGCTAGCAAACGCGGCTAATTTCATCGATAAGTTGCCTCGAGGTTTAGAGACATTGGTAGGGGAACATGGAACTCAACTCTCAGGAGGACAGAAACAGAGGATTGCTATAGCGAGGGCGATACTTAAAGATCCGAGGATCTTGCTGTTAGATGAAGCGACGAGCGCACTTGATGCGGAATCTGAAAGGGTAGTCCAAGAGGCTTTAGATAGGGTAATGATGAGCCGGACTACTGTGATTGTTGCACATCGGTTAAGCACAGTGAGAAATGCTGATATGATTGCTGTGATTCACCGCGGCAAGATAGTGGAAGAAGGTTCACACTCGGAGCTACTCAAGGACCATGAAGGGGCTTATGCACAACTTATACGGTTACAAAAGATAAAAAAAGAACCGAAGAGATTGGAGAGTTCAAATGAATTGCGAGACAGATCAATCAACCGTGGATCATCTAGAAACATCAGAACGAGGGTGCATGATGATGACTCTGTTTCCGTTCTTGGTTTACTTGGACGCCAAGAAAATACTGAAATTTCTCGAGAACAAAGCCGAAATGTGTCGATAACCCGAATCGCTGCTCTAAACAAGCCGGAGACTACCATTCTTATACTTGGAACCTTATTAGGTGCAGTGAACGGCACTATATTCCCGATTTTTGGTATCCTCTTTGCAAAAGTAATCGAAGCTTTCTTCAAACCGCCTCACGATATGAAGAGAGATTCAAGATTCTGGTCAATGATATTCGTGCTTCTTGGTGTAGCTTCTTTGATAGTGTATCCAATGCATACCTACTTGTTTGCTGTAGCTGGAGGGAGATTAATTCAGAGGATAAGAGTAATGTGTTTTGAGAAAGTTGTTCACATGGAGGTTGGGTGGTTCGATGATCCTGAGAACTCGAGTGGCACCATAGGATCAAGGCTCTCTGCTGATGCAGCCTTGATCAAGACTCTTGTGGGCGACTCGCTGTCTTTATCTGTTAAGAACGCTGCAGCCGCAGTCTCCGGTCTGATTATAGCTTTCACAGCGAGTTGGAAATTGGCGGTTATTATCTTAGTAATGATTCCTTTAATTGGAATCAATGGTTATCTTCAAATTAAGTTCATTAAAGGCTTCACTGCAGACGCAAAGGCAAAGTACGAGGAGGCGAGTCAGGTGGCGAATGACGCGGTGGGGAGTATAAGAACTGTTGCGTCTTTTTGTGCAGAGGAGAAAGTGATGGAGATGTATAAGAAGCGATGTGAAGATACGATTAAATCTGGGATTAAGCAAGGTTTAATCAGCGGAGTAGGGTTTGGTATCTCCTTTTTCGTTCTTTACTCTGTCTACGCTAGTTGTTTCTACGTGGGAGCTAGACTGGTTAAAGCCGGAAGGACAAACTTCAACGATGTTTTTCAGGTTTTCTTGGCGTTAACCATGACAGCGATTGGGATATCTCAAGCTAGCTCTTTTGCTCCTGATTCGAGTAAAGCAAAGGGTGCTGCTGCTTCCATTTTCGGGATTATTGATGGGAAATCGATGATAGATTCGAGAGATGAATCGGGACTCGTGTTAGAGAATGTTAAAGGAGATATCGAGCTTTGTCACATAAGCTTCACCTACCAAACTAGACCTGACGTTCAAATCTTTCGTGACCTATGTTTCGCCATTCGTGCTGGACAGACGGTTGCTTTGGTCGGAGAGAGTGGATCAGGTAAATCTACAGTGATTTCTCTGTTACAAAGGTTTTATGATCCGGATTCGGGTCATATAACTCTAGACAGAGTTGAGCTCAAGAAGCTGCAACTAAAATGGGTGAGACAACAAATGGGGCTTGTAGGGCAAGAGCCTGTACTGTTCAACGACACAATAAGATCCAACATTGCCTACGGAAAAGGCGGTGATGAAGCATCCGAGGCTGAGATCATAGCTGCCGCAGAGCTTGCTAATGCCCACGGGTTCATATCTAGTATACAACAGGGTTATGATACGGTGGTGGGAGAAAGAGGGATACAATTGTCAGGAGGACAGAAGCAACGCGTGGCAATTGCACGCGCCATCGTGAAAGAACCGAAGATTCTGTTACTCGACGAAGCAACGAGCGCGTTGGACGCAGAATCGGAGCGGGTGGTTCAAGACGCGCTTGACCGAGTGATGGTGAACCGGACCACAGTAGTAGTGGCTCACAGGCTTTCCACGATCAAGAATGCTGACGTCATAGCCGTGGTCAAGAACGGTGTGATCGTAGAGAAAGGGACGCACGAAACGTTGATCAATATCGAAGGTGGTGTTTATGCTTCGCTTGTTCAACTTCACATTAGTGCTTCTAGTTGA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

1229

Amino Acids

133.23

Weight (kDa)

8.23

Isoelectric Point (pI)

32.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 26 - 294 3.2e-59 ABC transporter transmembrane region
ABC_tran PF00005 369 - 515 1.5e-31 ABC transporter
ABC_membrane PF00664 662 - 927 6.7e-60 ABC transporter transmembrane region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 710, 957
AatII GACGTC 1 cut(s) 3573
AbsI CCTCGAGG 1 cut(s) 1419
AccB1I GGYRCC 1 cut(s) 2282
AccBSI CCGCTC 1 cut(s) 3481
AccI GTMKAC 4 cut(s) 222, 845, 2703, 3328
AccII CGCG 7 cut(s) 1394, 1677, 2546, 3396, 3411, 3461, 3497
AccIII TCCGGA 1 cut(s) 3112
AclI AACGTT 1 cut(s) 3623
AclWI GGATC 9 cut(s) 1196, 1505, 1526, 1834, 2258, 2299, 3073, 3104, 3225
AcsI RAATTY 4 cut(s) 215, 704, 712, 1911
AcuI CTGAAG 1 cut(s) 242
AcyI GRCGYC 2 cut(s) 1894, 3570
AfaI GTAC 3 cut(s) 24, 2516, 3210
AfiI CCNNNNNNNGG 7 cut(s) 1211, 1729, 2036, 2450, 2874, 3119, 3511
AflIII ACRYGT 1 cut(s) 3394
AhdI GACNNNNNGTC 1 cut(s) 2344
AjuI GAANNNNNNNTTGG 2 cut(s) 1080, 1112
AleI CACNNNNGTG 1 cut(s) 3675
Alw21I GWGCWC 2 cut(s) 371, 3150
Alw26I GTCTC 7 cut(s) 202, 1072, 1424, 1800, 1967, 2383, 3169
AlwI GGATC 9 cut(s) 1196, 1505, 1526, 1834, 2258, 2299, 3073, 3104, 3225
Ama87I CYCGRG 3 cut(s) 1419, 1917, 2275
Aor13HI TCCGGA 1 cut(s) 3112
ApoI RAATTY 4 cut(s) 215, 704, 712, 1911
ArsI GACNNNNNNTTYG 4 cut(s) 3002, 3031, 3034, 3063
AseI ATTAAT 1 cut(s) 2198
Asp700I GAANNNNTTC 2 cut(s) 1299, 1365
AspLEI GCGC 4 cut(s) 1547, 3413, 3461, 3499
AspS9I GGNCC 2 cut(s) 1720, 3522
AsuHPI GGTGA 8 cut(s) 152, 410, 440, 1664, 2965, 3184, 3269, 3526
AsuII TTCGAA 1 cut(s) 652
AsuNHI GCTAGC 2 cut(s) 1384, 2819
AvaI CYCGRG 3 cut(s) 1419, 1917, 2275
AvaII GGWCC 2 cut(s) 1720, 3522
BaeI ACNNNNGTAYC 4 cut(s) 3336, 3359, 3369, 3392
BanI GGYRCC 1 cut(s) 2282
BanII GRGCYC 1 cut(s) 3150
BauI CACGAG 2 cut(s) 591, 2924
Bbv12I GWGCWC 2 cut(s) 371, 3150
BccI CCATC 6 cut(s) 495, 1223, 2590, 2879, 3422, 3505
BceAI ACGGC 3 cut(s) 970, 2032, 3563
BcgI CGANNNNNNTGC 4 cut(s) 600, 634, 1504, 1538
BciVI GTATCC 3 cut(s) 2051, 2166, 3360
BclI TGATCA 3 cut(s) 1176, 2319, 3627
BcoDI GTCTC 7 cut(s) 202, 1072, 1424, 1800, 1967, 2383, 3169
BfmI CTRYAG 9 cut(s) 96, 546, 697, 948, 1488, 2181, 2367, 2496, 3078
BfuI GTATCC 3 cut(s) 2051, 2166, 3360
Bme18I GGWCC 2 cut(s) 1720, 3522
BmeRI GACNNNNNGTC 1 cut(s) 2344
BmeT110I CYCGRG 3 cut(s) 1419, 1917, 2275
BmgT120I GGNCC 2 cut(s) 1720, 3522
BmiI GGNNCC 2 cut(s) 1996, 2284
BmrI ACTGGG 1 cut(s) 291
BmsI GCATC 5 cut(s) 626, 985, 1543, 2299, 3275
BmtI GCTAGC 2 cut(s) 1388, 2823
BmuI ACTGGG 1 cut(s) 291
BplI GAGNNNNNCTC 4 cut(s) 182, 214, 3132, 3164
BpmI CTGGAG 1 cut(s) 2208
Bpu14I TTCGAA 1 cut(s) 652
BpuEI CTTGAG 3 cut(s) 1700, 2799, 3134
Bsa29I ATCGAT 2 cut(s) 1407, 2894
BsaAI YACGTR 1 cut(s) 2722
BsaBI GATNNNNATC 1 cut(s) 3632
BsaHI GRCGYC 2 cut(s) 1894, 3570
BsaI GGTCTC 1 cut(s) 1072
BsaJI CCNNGG 9 cut(s) 201, 226, 1033, 1514, 1675, 1822, 3270, 3310, 3579
BsaWI WCCGGW 5 cut(s) 371, 395, 2381, 3112, 3519
BsaXI ACNNNNNCTCC 6 cut(s) 366, 396, 1238, 1268, 2237, 2267
Bsc4I CCNNNNNNNGG 7 cut(s) 1211, 1729, 2036, 2450, 2874, 3119, 3511
Bse1I ACTGG 3 cut(s) 286, 451, 2739
Bse3DI GCAATG 1 cut(s) 3237
Bse8I GATNNNNATC 1 cut(s) 3632
BseAI TCCGGA 1 cut(s) 3112
BseCI ATCGAT 2 cut(s) 1407, 2894
BseDI CCNNGG 9 cut(s) 201, 226, 1033, 1514, 1675, 1822, 3270, 3310, 3579
BseGI GGATG 3 cut(s) 279, 506, 3266
BseJI GATNNNNATC 1 cut(s) 3632
BseLI CCNNNNNNNGG 7 cut(s) 1211, 1729, 2036, 2450, 2874, 3119, 3511
BseMI GCAATG 1 cut(s) 3237
BseMII CTCAG 4 cut(s) 63, 1476, 2259, 3267
BseNI ACTGG 3 cut(s) 286, 451, 2739
BseRI GAGGAG 2 cut(s) 2534, 2600
BsgI GTGCAG 3 cut(s) 576, 2028, 2601
Bsh1236I CGCG 7 cut(s) 1394, 1677, 2546, 3396, 3411, 3461, 3497
Bsh1285I CGRYCG 2 cut(s) 90, 975
BshNI GGYRCC 1 cut(s) 2282
BshVI ATCGAT 2 cut(s) 1407, 2894
BsiEI CGRYCG 2 cut(s) 90, 975
BsiHKAI GWGCWC 2 cut(s) 371, 3150
BsiHKCI CYCGRG 3 cut(s) 1419, 1917, 2275
BsiSI CCGG 9 cut(s) 372, 396, 1212, 1606, 1970, 2382, 2745, 3113, 3520
BslFI GGGAC 3 cut(s) 250, 2934, 3625
BslI CCNNNNNNNGG 7 cut(s) 1211, 1729, 2036, 2450, 2874, 3119, 3511
BsmAI GTCTC 7 cut(s) 202, 1072, 1424, 1800, 1967, 2383, 3169
BsmFI GGGAC 3 cut(s) 250, 2934, 3625
BsmI GAATGC 1 cut(s) 3568
Bso31I GGTCTC 1 cut(s) 1072
BsoBI CYCGRG 3 cut(s) 1419, 1917, 2275
Bsp119I TTCGAA 1 cut(s) 652
Bsp1286I GDGCHC 2 cut(s) 371, 3150
Bsp13I TCCGGA 1 cut(s) 3112
BspCNI CTCAG 4 cut(s) 62, 1475, 2260, 3268
BspDI ATCGAT 2 cut(s) 1407, 2894
BspEI TCCGGA 1 cut(s) 3112
BspFNI CGCG 7 cut(s) 1394, 1677, 2546, 3396, 3411, 3461, 3497
BspLI GGNNCC 2 cut(s) 1996, 2284
BspMAI CTGCAG 3 cut(s) 952, 2371, 2500
BspOI GCTAGC 2 cut(s) 1388, 2823
BspPI GGATC 9 cut(s) 1196, 1505, 1526, 1834, 2258, 2299, 3073, 3104, 3225
BspT104I TTCGAA 1 cut(s) 652
BspT107I GGYRCC 1 cut(s) 2282
BspTNI GGTCTC 1 cut(s) 1072
BsrBI CCGCTC 1 cut(s) 3481
BsrDI GCAATG 1 cut(s) 3237
BsrI ACTGG 3 cut(s) 286, 451, 2739
BssECI CCNNGG 9 cut(s) 201, 226, 1033, 1514, 1675, 1822, 3270, 3310, 3579
BssNAI GTATAC 2 cut(s) 846, 3329
BssNI GRCGYC 2 cut(s) 1894, 3570
BssSI CACGAG 2 cut(s) 591, 2924
BssT1I CCWWGG 2 cut(s) 201, 226
Bst1107I GTATAC 2 cut(s) 846, 3329
Bst2BI CACGAG 2 cut(s) 591, 2924
Bst6I CTCTTC 5 cut(s) 543, 1083, 1356, 1772, 2087
BstACI GRCGYC 2 cut(s) 1894, 3570
BstAPI GCANNNNNTGC 4 cut(s) 1136, 1553, 2855, 3299
BstBAI YACGTR 1 cut(s) 2722
BstBI TTCGAA 1 cut(s) 652
BstC8I GCNNGC 5 cut(s) 684, 1386, 2821, 3300, 3409
BstDEI CTNAG 7 cut(s) 49, 332, 1021, 1462, 2268, 2431, 3276
BstDSI CCRYGG 4 cut(s) 1675, 1822, 3310, 3579
BstF5I GGATG 3 cut(s) 279, 506, 3266
BstFNI CGCG 7 cut(s) 1394, 1677, 2546, 3396, 3411, 3461, 3497
BstHHI GCGC 4 cut(s) 1547, 3413, 3461, 3499
BstMAI GTCTC 7 cut(s) 202, 1072, 1424, 1800, 1967, 2383, 3169
BstMCI CGRYCG 2 cut(s) 90, 975
BstSFI CTRYAG 9 cut(s) 96, 546, 697, 948, 1488, 2181, 2367, 2496, 3078
BstUI CGCG 7 cut(s) 1394, 1677, 2546, 3396, 3411, 3461, 3497
BstX2I RGATCY 3 cut(s) 1510, 1518, 3230
BstYI RGATCY 3 cut(s) 1510, 1518, 3230
BstZ17I GTATAC 2 cut(s) 846, 3329
Bsu15I ATCGAT 2 cut(s) 1407, 2894
BsuI GTATCC 3 cut(s) 2051, 2166, 3360
BsuTUI ATCGAT 2 cut(s) 1407, 2894
BtgI CCRYGG 4 cut(s) 1675, 1822, 3310, 3579
BtgZI GCGATG 2 cut(s) 701, 2629
BtsCI GGATG 3 cut(s) 279, 506, 3266
BtsI GCAGTG 3 cut(s) 1222, 2016, 2493
BtsIMutI CAGTG 6 cut(s) 876, 1222, 1647, 2016, 2493, 3087
Cac8I GCNNGC 5 cut(s) 684, 1386, 2821, 3300, 3409
CfoI GCGC 4 cut(s) 1547, 3413, 3461, 3499
Cfr13I GGNCC 2 cut(s) 1720, 3522
Cfr42I CCGCGG 1 cut(s) 1678
ClaI ATCGAT 2 cut(s) 1407, 2894
CseI GACGC 7 cut(s) 1902, 2510, 2552, 2559, 3476, 3503, 3622
Csp6I GTAC 3 cut(s) 23, 2515, 3209
CspCI CAANNNNNGTGG 2 cut(s) 450, 485
CviAII CATG 5 cut(s) 1448, 1724, 1856, 2242, 2794
CviQI GTAC 3 cut(s) 23, 2515, 3209
DdeI CTNAG 7 cut(s) 49, 332, 1021, 1462, 2268, 2431, 3276
DriI GACNNNNNGTC 1 cut(s) 2344
Eam1104I CTCTTC 5 cut(s) 543, 1083, 1356, 1772, 2087
Eam1105I GACNNNNNGTC 1 cut(s) 2344
EarI CTCTTC 5 cut(s) 543, 1083, 1356, 1772, 2087
EciI GGCGGA 1 cut(s) 1116
Ecl136II GAGCTC 1 cut(s) 3148
Eco130I CCWWGG 2 cut(s) 201, 226
Eco24I GRGCYC 1 cut(s) 3150
Eco31I GGTCTC 1 cut(s) 1072
Eco32I GATATC 3 cut(s) 1030, 2811, 2950
Eco47I GGWCC 2 cut(s) 1720, 3522
Eco53kI GAGCTC 1 cut(s) 3148
Eco57I CTGAAG 1 cut(s) 242
Eco88I CYCGRG 3 cut(s) 1419, 1917, 2275
EcoICRI GAGCTC 1 cut(s) 3148
EcoRV GATATC 3 cut(s) 1030, 2811, 2950
EcoT14I CCWWGG 2 cut(s) 201, 226
EcoT22I ATGCAT 1 cut(s) 2166
EcoT38I GRGCYC 1 cut(s) 3150
ErhI CCWWGG 2 cut(s) 201, 226
FaeI CATG 5 cut(s) 1451, 1727, 1859, 2245, 2797
FalI AAGNNNNNCTT 2 cut(s) 3483, 3515
FaqI GGGAC 3 cut(s) 250, 2934, 3625
FatI CATG 5 cut(s) 1447, 1723, 1855, 2241, 2793
FauI CCCGC 2 cut(s) 1148, 3474
FbaI TGATCA 3 cut(s) 1176, 2319, 3627
FblI GTMKAC 4 cut(s) 222, 845, 2703, 3328
FokI GGATG 3 cut(s) 286, 513, 3253
FriOI GRGCYC 1 cut(s) 3150
GlaI GCGC 4 cut(s) 1546, 3412, 3460, 3498
GsuI CTGGAG 1 cut(s) 2208
HapII CCGG 9 cut(s) 372, 396, 1212, 1606, 1970, 2382, 2745, 3113, 3520
HgaI GACGC 7 cut(s) 1902, 2510, 2552, 2559, 3476, 3503, 3622
HhaI GCGC 4 cut(s) 1547, 3413, 3461, 3499
Hin1I GRCGYC 2 cut(s) 1894, 3570
Hin1II CATG 5 cut(s) 1451, 1727, 1859, 2245, 2797
Hin6I GCGC 4 cut(s) 1545, 3411, 3459, 3497
HinP1I GCGC 4 cut(s) 1545, 3411, 3459, 3497
HincII GTYRAC 2 cut(s) 1237, 2790
HindII GTYRAC 2 cut(s) 1237, 2790
HindIII AAGCTT 2 cut(s) 2064, 2968
HpaI GTTAAC 2 cut(s) 1237, 2790
HpaII CCGG 9 cut(s) 372, 396, 1212, 1606, 1970, 2382, 2745, 3113, 3520
HphI GGTGA 8 cut(s) 152, 410, 440, 1664, 2965, 3184, 3269, 3526
Hpy99I CGWCG 3 cut(s) 991, 1543, 3449
HpyAV CCTTC 6 cut(s) 55, 427, 1688, 1721, 2742, 3632
HpyCH4IV ACGT 4 cut(s) 2721, 2994, 3570, 3623
HpyF3I CTNAG 7 cut(s) 49, 332, 1021, 1462, 2268, 2431, 3276
HpySE526I ACGT 4 cut(s) 2721, 2994, 3570, 3623
Hsp92I GRCGYC 2 cut(s) 1894, 3570
Hsp92II CATG 5 cut(s) 1451, 1727, 1859, 2245, 2797
HspAI GCGC 4 cut(s) 1545, 3411, 3459, 3497
Kpn2I TCCGGA 1 cut(s) 3112
Ksp22I TGATCA 3 cut(s) 1176, 2319, 3627
KspAI GTTAAC 2 cut(s) 1237, 2790
KspI CCGCGG 1 cut(s) 1678
LmnI GCTCC 6 cut(s) 92, 245, 1708, 2726, 2836, 3478
LweI GCATC 5 cut(s) 626, 985, 1543, 2299, 3275
MaeII ACGT 4 cut(s) 2721, 2994, 3570, 3623
MaeIII GTNAC 9 cut(s) 504, 574, 874, 1067, 1752, 2960, 3008, 3093, 3438
MbiI CCGCTC 1 cut(s) 3481
MfeI CAATTG 2 cut(s) 3371, 3402
MflI RGATCY 3 cut(s) 1510, 1518, 3230
MhlI GDGCHC 2 cut(s) 371, 3150
MluI ACGCGT 1 cut(s) 3394
MlyI GAGTC 5 cut(s) 1859, 2320, 2333, 2536, 2916
MmeI TCCRAC 5 cut(s) 251, 2390, 3034, 3258, 3444
Mph1103I ATGCAT 1 cut(s) 2166
MroI TCCGGA 1 cut(s) 3112
MroXI GAANNNNTTC 2 cut(s) 1299, 1365
MslI CAYNNNNRTG 3 cut(s) 1860, 3578, 3675
MspA1I CMGCKG 4 cut(s) 1136, 1376, 1677, 2661
MspI CCGG 9 cut(s) 372, 396, 1212, 1606, 1970, 2382, 2745, 3113, 3520
MunI CAATTG 2 cut(s) 3371, 3402
Mva1269I GAATGC 1 cut(s) 3568
MvnI CGCG 7 cut(s) 1394, 1677, 2546, 3396, 3411, 3461, 3497
NheI GCTAGC 2 cut(s) 1384, 2819
NlaIII CATG 5 cut(s) 1451, 1727, 1859, 2245, 2797
NlaIV GGNNCC 2 cut(s) 1996, 2284
NmuCI GTSAC 3 cut(s) 874, 2960, 3008
NsiI ATGCAT 1 cut(s) 2166
NspV TTCGAA 1 cut(s) 652
OliI CACNNNNGTG 1 cut(s) 3675
PaeR7I CTCGAG 3 cut(s) 1419, 1917, 2275
PcsI WCGNNNNNNNCGW 3 cut(s) 3576, 3597, 3620
PctI GAATGC 1 cut(s) 3568
PdmI GAANNNNTTC 2 cut(s) 1299, 1365
Ple19I CGATCG 2 cut(s) 90, 975
PleI GAGTC 5 cut(s) 1859, 2320, 2333, 2535, 2916
PpsI GAGTC 5 cut(s) 1859, 2320, 2333, 2535, 2916
Ppu21I YACGTR 1 cut(s) 2722
PshBI ATTAAT 1 cut(s) 2198
PsiI TTATAA 2 cut(s) 710, 957
Psp124BI GAGCTC 1 cut(s) 3150
Psp1406I AACGTT 1 cut(s) 3623
PspN4I GGNNCC 2 cut(s) 1996, 2284
PspPI GGNCC 2 cut(s) 1720, 3522
PspXI VCTCGAGB 2 cut(s) 1419, 2275
PstI CTGCAG 3 cut(s) 952, 2371, 2500
PsuI RGATCY 3 cut(s) 1510, 1518, 3230
PvuI CGATCG 2 cut(s) 90, 975
RsaI GTAC 3 cut(s) 24, 2516, 3210
RsaNI GTAC 3 cut(s) 23, 2515, 3209
RseI CAYNNNNRTG 3 cut(s) 1860, 3578, 3675
SacI GAGCTC 1 cut(s) 3150
SacII CCGCGG 1 cut(s) 1678
Sau96I GGNCC 2 cut(s) 1720, 3522
SchI GAGTC 5 cut(s) 1859, 2320, 2333, 2536, 2916
SduI GDGCHC 2 cut(s) 371, 3150
SfaNI GCATC 5 cut(s) 626, 985, 1543, 2299, 3275
SfcI CTRYAG 9 cut(s) 96, 546, 697, 948, 1488, 2181, 2367, 2496, 3078
Sfr274I CTCGAG 3 cut(s) 1419, 1917, 2275
Sfr303I CCGCGG 1 cut(s) 1678
SfuI TTCGAA 1 cut(s) 652
SgrBI CCGCGG 1 cut(s) 1678
SinI GGWCC 2 cut(s) 1720, 3522
SlaI CTCGAG 3 cut(s) 1419, 1917, 2275
SmiMI CAYNNNNRTG 3 cut(s) 1860, 3578, 3675
SmlI CTYRAG 6 cut(s) 1419, 1715, 1917, 2275, 2814, 3149
SmoI CTYRAG 6 cut(s) 1419, 1715, 1917, 2275, 2814, 3149
SstI GAGCTC 1 cut(s) 3150
StyI CCWWGG 2 cut(s) 201, 226
TaiI ACGT 4 cut(s) 2724, 2997, 3573, 3626
TaqII GACCGA 1 cut(s) 3519
TatI WGTACW 1 cut(s) 3208
TauI GCSGC 6 cut(s) 938, 1379, 1397, 1680, 2375, 3293
TscAI CASTG 6 cut(s) 883, 1222, 1647, 2016, 2500, 3087
TseFI GTSAC 3 cut(s) 874, 2960, 3008
Tsp45I GTSAC 3 cut(s) 874, 2960, 3008
TspGWI ACGGA 3 cut(s) 1353, 1864, 3261
TspRI CASTG 6 cut(s) 883, 1222, 1647, 2016, 2500, 3087
VpaK11BI GGWCC 2 cut(s) 1720, 3522
VspI ATTAAT 1 cut(s) 2198
XapI RAATTY 4 cut(s) 215, 704, 712, 1911
XbaI TCTAGA 2 cut(s) 1832, 3133
XcmI CCANNNNNNNNNTGG 1 cut(s) 3532
XhoI CTCGAG 3 cut(s) 1419, 1917, 2275
XmiI GTMKAC 4 cut(s) 222, 845, 2703, 3328
XmnI GAANNNNTTC 2 cut(s) 1299, 1365
ZraI GACGTC 1 cut(s) 3571
Zsp2I ATGCAT 1 cut(s) 2166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.