Rorug05G0181800

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
17493076 .. 17494276
1201 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0181800.1

Sequence Viewer

Length: 600 bp
ATGAAATGCCCAAAATGGCATGATACCCTTTTGCCGACTGCAGACCAAGCACAACTGATCAACAAAAACCAGGCTGCAGAGGAGGCAGGATGTGGGGTCGAAGGAGACACCAAGAAGACGATTCATCATTCAAATCGAAAAACCTCCACGCCGAGAGGAGGAGAAGGCAGAAGCTCGATGACTAAAGAAACCATTATTGAGGATTCCATCACTTACATTAAGGAGCTGCAGATGAATGTGAATATCTTGCAGGAGCAGCTATTCAAGATGGAAGCATCAGCGCAAGAGGCGCTAGAGCTGAGGAAAGATGAAGTTGATGCTGCAGAAGAGATGAAGAAATTTGGGATTCAGATAGGGGTTGATGTGGCTCAGATTGATGGGAATAAACTTTGGGTAAAGGCGATTATTGAGAAGAAAAGAGGTGGCTTCACTAAACTGGTGGAGGCCATGACGTACTTTGGCTTTGAACTCACTGATACCAATATCATAACCTCCAATGGAGCAATGGTTGTTTCATCCATTCTAACAGGATTTCACTGTGATACGCTTCAGGTCGAGCAAACCAGGGAACTTATTCTAGAGATCGTTAACGGCATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

199

Amino Acids

22.13

Weight (kDa)

5.21

Isoelectric Point (pI)

39.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 338
AcuI CTGAAG 1 cut(s) 533
AfaI GTAC 1 cut(s) 455
AfiI CCNNNNNNNGG 1 cut(s) 158
AgsI TTSAA 3 cut(s) 132, 265, 467
AjnI CCWGG 2 cut(s) 69, 563
AluBI AGCT 4 cut(s) 174, 226, 259, 298
AluI AGCT 4 cut(s) 174, 226, 259, 298
Alw26I GTCTC 1 cut(s) 99
AoxI GGCC 1 cut(s) 444
ApeKI GCWGC 4 cut(s) 74, 226, 256, 320
ApoI RAATTY 1 cut(s) 338
Asp700I GAANNNNTTC 1 cut(s) 573
AspLEI GCGC 2 cut(s) 283, 292
BbsI GAAGAC 1 cut(s) 122
BbvCI CCTCAGC 1 cut(s) 299
BbvI GCAGC 4 cut(s) 61, 213, 268, 307
BccI CCATC 3 cut(s) 215, 262, 371
BciT130I CCWGG 2 cut(s) 71, 565
BclI TGATCA 1 cut(s) 57
BcoDI GTCTC 1 cut(s) 99
BfaI CTAG 2 cut(s) 293, 578
BfmI CTRYAG 4 cut(s) 39, 75, 227, 321
BfoI RGCGCY 1 cut(s) 293
BisI GCNGC 4 cut(s) 75, 227, 257, 321
BlsI GCNGC 4 cut(s) 76, 228, 258, 322
Bme1390I CCNGG 2 cut(s) 71, 565
BmrFI CCNGG 2 cut(s) 71, 565
BmsI GCATC 2 cut(s) 284, 307
BpiI GAAGAC 1 cut(s) 122
Bpu10I CCTNAGC 1 cut(s) 299
BsaJI CCNNGG 1 cut(s) 564
BsaXI ACNNNNNCTCC 2 cut(s) 492, 522
Bsc4I CCNNNNNNNGG 1 cut(s) 158
Bse1I ACTGG 1 cut(s) 441
Bse3DI GCAATG 1 cut(s) 510
BseBI CCWGG 2 cut(s) 71, 565
BseDI CCNNGG 1 cut(s) 564
BseGI GGATG 2 cut(s) 95, 515
BseLI CCNNNNNNNGG 1 cut(s) 158
BseMI GCAATG 1 cut(s) 510
BseMII CTCAG 2 cut(s) 290, 383
BseNI ACTGG 1 cut(s) 441
BseRI GAGGAG 3 cut(s) 95, 171, 174
BseXI GCAGC 4 cut(s) 61, 213, 268, 307
BshFI GGCC 1 cut(s) 446
BslI CCNNNNNNNGG 1 cut(s) 158
BsmAI GTCTC 1 cut(s) 99
BsnI GGCC 1 cut(s) 446
Bsp143I GATC 2 cut(s) 57, 582
BspANI GGCC 1 cut(s) 446
BspCNI CTCAG 2 cut(s) 291, 382
BspMAI CTGCAG 4 cut(s) 43, 79, 231, 325
BsrDI GCAATG 1 cut(s) 510
BsrI ACTGG 1 cut(s) 441
BssECI CCNNGG 1 cut(s) 564
BssMI GATC 2 cut(s) 57, 582
Bst2UI CCWGG 2 cut(s) 71, 565
Bst4CI ACNGT 1 cut(s) 539
Bst6I CTCTTC 1 cut(s) 321
BstDEI CTNAG 2 cut(s) 299, 369
BstF5I GGATG 2 cut(s) 95, 515
BstH2I RGCGCY 1 cut(s) 293
BstHHI GCGC 2 cut(s) 283, 292
BstKTI GATC 2 cut(s) 60, 585
BstMAI GTCTC 1 cut(s) 99
BstMBI GATC 2 cut(s) 57, 582
BstMWI GCNNNNNNNGC 5 cut(s) 47, 83, 256, 287, 289
BstNI CCWGG 2 cut(s) 71, 565
BstSCI CCNGG 2 cut(s) 69, 563
BstSFI CTRYAG 4 cut(s) 39, 75, 227, 321
BstV1I GCAGC 4 cut(s) 61, 213, 268, 307
BstV2I GAAGAC 1 cut(s) 122
BsuRI GGCC 1 cut(s) 446
BtsCI GGATG 2 cut(s) 95, 515
BtsIMutI CAGTG 2 cut(s) 471, 535
CfoI GCGC 2 cut(s) 283, 292
Csp6I GTAC 1 cut(s) 454
CviAII CATG 2 cut(s) 20, 448
CviJI RGCY 9 cut(s) 74, 174, 226, 259, 298, 368, 426, 446, 462
CviKI_1 RGCY 9 cut(s) 74, 174, 226, 259, 298, 368, 426, 446, 462
CviQI GTAC 1 cut(s) 454
DdeI CTNAG 2 cut(s) 299, 369
DpnI GATC 2 cut(s) 59, 584
DpnII GATC 2 cut(s) 57, 582
Eam1104I CTCTTC 1 cut(s) 321
EarI CTCTTC 1 cut(s) 321
Eco57I CTGAAG 1 cut(s) 533
EcoRII CCWGG 2 cut(s) 69, 563
FaeI CATG 2 cut(s) 23, 451
FaiI YATR 5 cut(s) 21, 449, 488, 596, 598
FatI CATG 2 cut(s) 19, 447
FbaI TGATCA 1 cut(s) 57
Fnu4HI GCNGC 4 cut(s) 75, 227, 257, 321
FokI GGATG 2 cut(s) 102, 502
Fsp4HI GCNGC 4 cut(s) 75, 227, 257, 321
FspBI CTAG 2 cut(s) 293, 578
GlaI GCGC 2 cut(s) 282, 291
GluI GCNGC 4 cut(s) 75, 227, 257, 321
HaeII RGCGCY 1 cut(s) 293
HaeIII GGCC 1 cut(s) 446
HhaI GCGC 2 cut(s) 283, 292
Hin1II CATG 2 cut(s) 23, 451
Hin6I GCGC 2 cut(s) 281, 290
HinP1I GCGC 2 cut(s) 281, 290
HincII GTYRAC 1 cut(s) 589
HindII GTYRAC 1 cut(s) 589
HinfI GANTC 3 cut(s) 121, 203, 346
HpaI GTTAAC 1 cut(s) 589
Hpy166II GTNNAC 1 cut(s) 589
Hpy188I TCNGA 2 cut(s) 351, 372
Hpy188III TCNNGA 2 cut(s) 265, 578
Hpy8I GTNNAC 1 cut(s) 589
HpyAV CCTTC 2 cut(s) 95, 158
HpyCH4III ACNGT 1 cut(s) 539
HpyCH4IV ACGT 1 cut(s) 452
HpyCH4V TGCA 5 cut(s) 41, 77, 229, 250, 323
HpyF10VI GCNNNNNNNGC 5 cut(s) 47, 83, 256, 287, 289
HpyF3I CTNAG 2 cut(s) 299, 369
HpySE526I ACGT 1 cut(s) 452
Hsp92II CATG 2 cut(s) 23, 451
HspAI GCGC 2 cut(s) 281, 290
Ksp22I TGATCA 1 cut(s) 57
KspAI GTTAAC 1 cut(s) 589
Kzo9I GATC 2 cut(s) 57, 582
LmnI GCTCC 3 cut(s) 223, 253, 500
LpnPI CCDG 9 cut(s) 56, 72, 83, 236, 422, 513, 536, 550, 577
Lsp1109I GCAGC 4 cut(s) 61, 213, 268, 307
LweI GCATC 2 cut(s) 284, 307
MaeI CTAG 2 cut(s) 293, 578
MaeII ACGT 1 cut(s) 452
MalI GATC 2 cut(s) 59, 584
MboI GATC 2 cut(s) 57, 582
MboII GAAGA 4 cut(s) 127, 338, 346, 424
MluCI AATT 1 cut(s) 338
MroXI GAANNNNTTC 1 cut(s) 573
MseI TTAA 2 cut(s) 219, 588
MspR9I CCNGG 2 cut(s) 71, 565
MvaI CCWGG 2 cut(s) 71, 565
MwoI GCNNNNNNNGC 5 cut(s) 47, 83, 256, 287, 289
NdeII GATC 2 cut(s) 57, 582
NlaIII CATG 2 cut(s) 23, 451
NmeAIII GCCGAG 1 cut(s) 177
PdmI GAANNNNTTC 1 cut(s) 573
PfeI GAWTC 3 cut(s) 121, 203, 346
PkrI GCNGC 4 cut(s) 76, 228, 258, 322
Psp6I CCWGG 2 cut(s) 69, 563
PspGI CCWGG 2 cut(s) 69, 563
PstI CTGCAG 4 cut(s) 43, 79, 231, 325
RsaI GTAC 1 cut(s) 455
RsaNI GTAC 1 cut(s) 454
SaqAI TTAA 2 cut(s) 219, 588
SatI GCNGC 4 cut(s) 75, 227, 257, 321
Sau3AI GATC 2 cut(s) 57, 582
ScrFI CCNGG 2 cut(s) 71, 565
SetI ASST 9 cut(s) 146, 176, 228, 261, 300, 424, 455, 494, 555
SfaNI GCATC 2 cut(s) 284, 307
SfcI CTRYAG 4 cut(s) 39, 75, 227, 321
Sse9I AATT 1 cut(s) 338
SspMI CTAG 2 cut(s) 293, 578
StyD4I CCNGG 2 cut(s) 69, 563
TaaI ACNGT 1 cut(s) 539
TaiI ACGT 1 cut(s) 455
TaqI TCGA 4 cut(s) 99, 136, 176, 555
TasI AATT 1 cut(s) 338
TfiI GAWTC 3 cut(s) 121, 203, 346
Tru1I TTAA 2 cut(s) 219, 588
Tru9I TTAA 2 cut(s) 219, 588
TscAI CASTG 2 cut(s) 478, 542
TseI GCWGC 4 cut(s) 74, 226, 256, 320
TspDTI ATGAA 6 cut(s) 17, 113, 248, 324, 347, 504
TspRI CASTG 2 cut(s) 478, 542
XapI RAATTY 1 cut(s) 338
XbaI TCTAGA 1 cut(s) 577
XcmI CCANNNNNNNNNTGG 1 cut(s) 502
XmnI GAANNNNTTC 1 cut(s) 573
XspI CTAG 2 cut(s) 293, 578
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.