Rw4G023640

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Reverse (-)
49264444 .. 49269897
5454 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G023640.1

Sequence Viewer

Length: 3825 bp
ATGGCTGATCATGAAGAACAGTCAGATGGAGATGTATTAAAAGAGCCGGCCATGGCATCAACAAAGGCAGCAGATTCCGAAAACAACAAGCACGATACTGCAGGCAAGAGCAAGGAGGGTGCAACCAACACAGTACCATATTACAAGCTCTTCTCATTTGCTGATTCCCTGGATTACCTGTTAATGTCTGTTGGTACGATCAGTGCTATCGGAAATGGAGTATGTATGCCTCTAATGACCGTGATCATGGGGGAGGTGATCAACTCTTTTGGAGAAACTACAAGTATCAATAAAGTGGTTGGTATAGTTTCCAAGGTGGCTCTCAAGTACGTTTACTTGGCTCTGGGGTCTGCTGCTGCTGCATTTTTACAAATGTCTTGCTGGATGATCACTGGAGAGAGACAGGCAGCAAGAATAAGAAGTTTATACTTGAAAACAATACTAAGGCAAGACGTTGGCTTTTTTGATACAGAGGCTAACACTGGGGAAATTGTTGAAAGGATGTCGGGGGATACTGTGCTCATTCAGGAAGCGATGGGGGAGAAAGTAGGAAGCTTTATCCAGTTAGTTGCTACATTCATAGGAGGCTTTGTTATAGCATTTGCCAAGGGATGGCGTCTCACCCTTGTCATGCTAACCTCTATTCCCCCTCTTATCTTATCCGGTGCTGTCACGAGCCTCACTATAAGGAAGTTGGCGTCCCGTGGACAAGAGGCATATTCAGTTGGAGCAACTGTTGTAGAGCAGACCATTGGTTCTATCAGAACTGTTGCATCATTTACGGGGGAGAAGCAAGCTATAACCAAGTACAACAACTCCTTAACTAAAGCTTACAAGTCTGGTGTGCAAGAGGGTTTGGCATCAGGGTTGGGTCTTGGTATGGTTGTGCTTGTTGTATTCTGCAGTTATGCTTTGGCAGTATGGTATGGCGGAAAAACGATACTTGAACAGGGATATAAAGCAGGAGATGTCATGAATGTGATTTTTGCTTTATTGACCGGCTCTTTCTCTCTTGGGCAGGCATCTCCATGCGTGAGTGCATTTTATGCTGGACAAGCTGCATCATTTAAGATGTTTGAGACAATTAACAGAAAGCCAGATATAGATGCTTATGACACTAATGGGATGGAATCAGAAGACATTCGTGGAGACATAGAACTTAGGGATGTTTCTTTTAGTTATCCTGCAAGACCGGATGAAAAAATATTCCATGGATTCTCACTCTCAATATCTAGTGGTGCAACTGCTGCTTTGGTTGGACAGAGTGGAAGTGGTAAATCGACCGTAATTTGTTTGATTGAGAGATTTTATGACCCACAGGCTGGTGAAGTTCTTATTGACGGTATTAATCTCAAAGAGTTCCAGCTGAATTGGATTAGACAGAAAATAGGGCTTGTCAGCCAGGAACCTATTTTGTTTACTTGCAGCATTAGAGATAATATTGGCTATGGGAAGGATGGTGCAACTACTGAAGAAATAAGGGCTGCTGCTGAGCTTGCCAATGCTGCTAATTTCATAGACAAACTACCTCAGGGACTAGATACAATGGTTGGTGAGCATGGAACTCAGCTATCTGGGGGCCAAAAGCAGAGAGTTGCTATAGCCAGAGCAATTTTAAAGAACCCAAAAATTCTTCTTTTAGATGAAGCAACAAGTGCTCTTGATGCAGAATCTGAGAGAATTGTGCAAGAGGCATTGGACAGAATTATGGTTAGTCGGACTACTGTCATTGTAGCGCACCGCTTGAGCACAGTAAGGAATGCTGATACCATTGCAGTGATACATCGCGGAACAATTGTTGAGCAAGGATCACATACTGAGCTAGTTAAGGATCCTGATGGTGCATATAGCCAGCTTATGAGGCTGCAAGAAATTAGCAGTATGTCAGAACAGAATGCTCAAAATGATCATGAAAGGCCAGAACTTTCTTCAAGTTTTCAAAAACTTCCTTCCTTTCGCTCCATAAGTCTGGGATCATCTGGAAGAGGAAATAGTAGTCGCCGCAGCTACTCATTCTCAATCTCACATGGTGCCCCCACCATAACCGGTGTCCTTGAAATACAACGTGATATTCTGGCTTCAGCATCGTCAGAAGTGCATCCACAAGTCTCACTTAGACGCCTGGCTTACCTGAATAAGCCAGAAATCCCAGTGCTATTCCTAGGTACTATAGCTGCAATAGTCAATGGGGTAACCTTGCCTATTTTCGGGGTGTTGATATCCAATATAATCAAGACCTTCTTTGAGCCACCTCATCAACTCCGAAAGGATTCCAAGTTTTGGGCATTAATATTTATTGTTCTTGGAGTGGTGTCTCTCTTGGCACATCCAATGAGAGCATACTTTTTTGCTGTAGCTGGGTGCAAGTTAATAAGACGAGTCCGTTCACTATGCTTTGAGAAGGTGGTTTACATGGAAGTAAGTTGGTTTGATGAAGCTGATCACTCGACTTCCCTACGGGGGATTGTTGGAGATGCTCTAGGTTTGGCTGTCATGAATACATCAACTACAATTGCCGGGTTGGTTATTGCTTTTGTGGCAAATTGGCAACTTGCTCTTATAATACTTGTTATGCTGCCTCTACTAGGAATAAGTGGATATTTTCAAGTCGAGTTCATGAAAGGATTAAGTGCAAATGCAAAGATAATGTATGAAGATGCAAGCCAAGTAGCCACTGATGCTGTGGGGAGTATTAGAACAATTGCTTCCTTTTGTGCTGAAGAAAAGGTGATCAAGTTGTACCAGACAAAATGTGAAGGCCCTATCAGGAGTGGGATAAGACAAGGGATAGTTAGTGGCATAGGTTTTGGGCTATCATTTTTCTTGCTTTATTCTGTATATGCATGCAGTTTTTATGCTGGGGCTCGACTTGTTGCAGCAGGCAAGACAACATTTCCTAATGTTTTTCGGGTTTTCTTTGCTCTCACTATGACAGCTATTGCATTGACTCATCAACAGAGTTCTTTAGCCCCGGATGCAAGTAAAGGAAAGAGCTCTGCCGCTTCCATATTTGCAATTCTTGACCGGAAATCCAAGATAGATTCAAGTGATGACTCCGGAACAACAATAGAAAATCTGAAGGGAGAAATTGAGTTTCGCCATGTTAGTTTCAAATATCCGAATAGACCTAATGTGCCCATCTTTCAGGATCTTTGCTTGACTATTCGCCATGGCAAGACAGTTGCTCTGGTTGGAGAGAGTGGAAGTGGGAAGTCGACAGTAATCTCATTGTTGCAGCGCTTTTATGATCCTGATTCAGGTCAAATTACATTAGATGGTACAGAAATGCAAACATTACAGCTGAAGTGGTTGAGACAGCAAATGGGGTTGGTGAGTCAGGAGCCCCTATTGTTTAATGACACAATCCGAGCTAACATTGCATATGGAAAGGAAGGAGAGGCAACTGAGGCTGAAATTATAGCAGCAGCAGAATTGGCAAATGCTCACAAGTTCATTAGTAGTTTACAACAGGGTTATGACACAATAGTGGGTGAACGAGGGGTTCAACTTTCTGGTGGACAGAAGCAAAGGGTAGCTATTGCAAGAGCTATAATGAAGGCACCAAAGATATTACTACTAGATGAAGCCACCAGTGCTCTTGATGCTGAATCTGAACGAGTGGTTCAAGATGCACTGGACCGAGTTATGGTGCATCGAACTACAGTTGTGGTTGCCCATCGGCTATCCACGATTAAGGGTGCAGATTTAATAGCAGTGGTGAAAAATGGAGTCATTGCAGAGAAAGGAAAGCATGAGACTTTGATCAGTATCGAGGGTGGAACTTATGCTTCTTTGGTATCACTACATGCAAGTGCCTCATCTTAG

Protein Analysis

1274

Amino Acids

137.63

Weight (kDa)

6.64

Isoelectric Point (pI)

33.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 64 - 336 8.6e-62 ABC transporter transmembrane region
ABC_tran PF00005 404 - 552 1.3e-32 ABC transporter
ABC_membrane PF00664 719 - 979 3.5e-47 ABC transporter transmembrane region
ABC_tran PF00005 1049 - 1198 4.2e-35 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2561
AccB1I GGYRCC 2 cut(s) 2030, 3559
AccB7I CCANNNNNTGG 3 cut(s) 612, 1322, 2280
AccI GTMKAC 1 cut(s) 3215
AccII CGCG 1 cut(s) 1788
AccIII TCCGGA 1 cut(s) 3056
AciI CCGC 5 cut(s) 930, 1741, 1788, 2002, 3000
AclWI GGATC 6 cut(s) 1816, 1826, 1839, 1981, 3156, 3242
AcoI YGGCCR 1 cut(s) 48
AcsI RAATTY 1 cut(s) 1629
AcuI CTGAAG 5 cut(s) 1491, 2064, 2739, 3098, 3323
AcyI GRCGYC 3 cut(s) 616, 698, 2119
AdeI CACNNNGTG 1 cut(s) 2030
AfaI GTAC 7 cut(s) 135, 196, 329, 809, 2167, 2741, 3280
AfeI AGCGCT 1 cut(s) 3239
AfiI CCNNNNNNNGG 8 cut(s) 612, 1322, 2207, 2280, 2460, 2585, 3257, 3646
AgeI ACCGGT 1 cut(s) 2045
AjnI CCWGG 3 cut(s) 168, 1401, 2121
AleI CACNNNNGTG 1 cut(s) 3485
Alw21I GWGCWC 5 cut(s) 522, 1660, 1751, 2996, 3598
Alw26I GTCTC 8 cut(s) 394, 623, 1073, 1143, 2113, 2319, 3307, 3749
AlwI GGATC 6 cut(s) 1816, 1826, 1839, 1981, 3156, 3242
AlwNI CAGNNNCTG 1 cut(s) 1673
Aor13HI TCCGGA 1 cut(s) 3056
Aor51HI AGCGCT 1 cut(s) 3239
AoxI GGCC 4 cut(s) 48, 1579, 1916, 2758
ApoI RAATTY 1 cut(s) 1629
AseI ATTAAT 2 cut(s) 1347, 2288
AsiGI ACCGGT 1 cut(s) 2045
Asp700I GAANNNNTTC 2 cut(s) 1140, 2269
AspA2I CCTAGG 1 cut(s) 2161
AspLEI GCGC 2 cut(s) 1738, 3240
AspS9I GGNCC 3 cut(s) 1579, 2759, 3637
AsuC2I CCSGG 2 cut(s) 2518, 2972
AsuHPI GGTGA 8 cut(s) 268, 613, 1337, 1565, 2740, 3343, 3503, 3730
AvaII GGWCC 1 cut(s) 3637
AvrII CCTAGG 1 cut(s) 2161
AxyI CCTNAGG 1 cut(s) 1530
BaeGI GKGCMC 2 cut(s) 2035, 3138
BaeI ACNNNNGTAYC 2 cut(s) 1533, 1566
BamHI GGATCC 1 cut(s) 1831
BanI GGYRCC 2 cut(s) 2030, 3559
BanII GRGCYC 3 cut(s) 2866, 2996, 3345
BarI GAAGNNNNNNTAC 2 cut(s) 2393, 2425
BauI CACGAG 1 cut(s) 673
BbsI GAAGAC 1 cut(s) 1143
Bbv12I GWGCWC 5 cut(s) 522, 1660, 1751, 2996, 3598
BccI CCATC 9 cut(s) 20, 529, 606, 1120, 1451, 1832, 3146, 3269, 3684
BciT130I CCWGG 3 cut(s) 170, 1403, 2123
BciVI GTATCC 1 cut(s) 505
BclI TGATCA 8 cut(s) 7, 243, 258, 387, 1906, 2440, 2730, 3762
BcnI CCSGG 2 cut(s) 2518, 2972
BcoDI GTCTC 8 cut(s) 394, 623, 1073, 1143, 2113, 2319, 3307, 3749
BfaI CTAG 7 cut(s) 1233, 1538, 1823, 2162, 2480, 2585, 3578
BfmI CTRYAG 6 cut(s) 99, 901, 1599, 2169, 2352, 3660
BfoI RGCGCY 1 cut(s) 3241
BfuI GTATCC 1 cut(s) 505
BlnI CCTAGG 1 cut(s) 2161
BlpI GCTNAGC 1 cut(s) 1491
Bme1390I CCNGG 5 cut(s) 170, 1403, 2123, 2518, 2972
Bme18I GGWCC 1 cut(s) 3637
BmgT120I GGNCC 3 cut(s) 1579, 2759, 3637
BmiI GGNNCC 6 cut(s) 1407, 1580, 1833, 2032, 3342, 3561
BmrFI CCNGG 5 cut(s) 170, 1403, 2123, 2518, 2972
BmrI ACTGGG 2 cut(s) 492, 2144
BmuI ACTGGG 2 cut(s) 492, 2144
BoxI GACNNNNGTC 1 cut(s) 1724
BpiI GAAGAC 1 cut(s) 1143
BpmI CTGGAG 1 cut(s) 414
Bpu1102I GCTNAGC 1 cut(s) 1491
BpuEI CTTGAG 2 cut(s) 308, 1765
BpuMI CCSGG 2 cut(s) 2518, 2972
BsaBI GATNNNNATC 1 cut(s) 3767
BsaHI GRCGYC 3 cut(s) 616, 698, 2119
BsaJI CCNNGG 9 cut(s) 51, 168, 312, 606, 703, 1210, 2161, 2970, 3169
BsaWI WCCGGW 5 cut(s) 662, 1192, 2045, 3024, 3056
BsaXI ACNNNNNCTCC 6 cut(s) 576, 606, 720, 750, 800, 830
Bsc4I CCNNNNNNNGG 8 cut(s) 612, 1322, 2207, 2280, 2460, 2585, 3257, 3646
Bse118I RCCGGY 3 cut(s) 46, 998, 2045
Bse1I ACTGG 6 cut(s) 397, 487, 562, 2150, 3591, 3639
Bse21I CCTNAGG 1 cut(s) 1530
Bse3DI GCAATG 3 cut(s) 1770, 3375, 3732
Bse8I GATNNNNATC 1 cut(s) 3767
BseAI TCCGGA 1 cut(s) 3056
BseBI CCWGG 3 cut(s) 170, 1403, 2123
BseDI CCNNGG 9 cut(s) 51, 168, 312, 606, 703, 1210, 2161, 2970, 3169
BseJI GATNNNNATC 1 cut(s) 3767
BseLI CCNNNNNNNGG 8 cut(s) 612, 1322, 2207, 2280, 2460, 2585, 3257, 3646
BseMI GCAATG 3 cut(s) 1770, 3375, 3732
BseMII CTCAG 6 cut(s) 1482, 1544, 1580, 1665, 1809, 3396
BseNI ACTGG 6 cut(s) 397, 487, 562, 2150, 3591, 3639
BseSI GKGCMC 2 cut(s) 2035, 3138
BseYI CCCAGC 2 cut(s) 2357, 2858
BsgI GTGCAG 1 cut(s) 3720
Bsh1236I CGCG 1 cut(s) 1788
Bsh1285I CGRYCG 1 cut(s) 1284
BshFI GGCC 4 cut(s) 50, 1581, 1918, 2760
BshNI GGYRCC 2 cut(s) 2030, 3559
BshTI ACCGGT 1 cut(s) 2045
BsiEI CGRYCG 1 cut(s) 1284
BsiHKAI GWGCWC 5 cut(s) 522, 1660, 1751, 2996, 3598
BsiSI CCGG 9 cut(s) 47, 663, 999, 1193, 2046, 2517, 2972, 3025, 3057
BslFI GGGAC 2 cut(s) 685, 1548
BslI CCNNNNNNNGG 8 cut(s) 612, 1322, 2207, 2280, 2460, 2585, 3257, 3646
BsmAI GTCTC 8 cut(s) 394, 623, 1073, 1143, 2113, 2319, 3307, 3749
BsmBI CGTCTC 1 cut(s) 623
BsmFI GGGAC 2 cut(s) 685, 1548
BsmI GAATGC 2 cut(s) 1765, 1900
BsnI GGCC 4 cut(s) 50, 1581, 1918, 2760
Bsp1286I GDGCHC 9 cut(s) 522, 1660, 1751, 2035, 2866, 2996, 3138, 3345, 3598
Bsp13I TCCGGA 1 cut(s) 3056
Bsp1720I GCTNAGC 1 cut(s) 1491
Bsp19I CCATGG 3 cut(s) 51, 1210, 3169
BspACI CCGC 5 cut(s) 930, 1741, 1788, 2002, 3000
BspANI GGCC 4 cut(s) 50, 1581, 1918, 2760
BspCNI CTCAG 6 cut(s) 1483, 1543, 1579, 1666, 1810, 3397
BspEI TCCGGA 1 cut(s) 3056
BspFNI CGCG 1 cut(s) 1788
BspHI TCATGA 5 cut(s) 10, 972, 1909, 2493, 2616
BspLI GGNNCC 6 cut(s) 1407, 1580, 1833, 2032, 3342, 3561
BspMAI CTGCAG 2 cut(s) 103, 905
BspPI GGATC 6 cut(s) 1816, 1826, 1839, 1981, 3156, 3242
BspQI GCTCTTC 1 cut(s) 155
BspT107I GGYRCC 2 cut(s) 2030, 3559
BsrDI GCAATG 3 cut(s) 1770, 3375, 3732
BsrFI RCCGGY 3 cut(s) 46, 998, 2045
BsrI ACTGG 6 cut(s) 397, 487, 562, 2150, 3591, 3639
BssAI RCCGGY 3 cut(s) 46, 998, 2045
BssECI CCNNGG 9 cut(s) 51, 168, 312, 606, 703, 1210, 2161, 2970, 3169
BssNI GRCGYC 3 cut(s) 616, 698, 2119
BssSI CACGAG 1 cut(s) 673
BssT1I CCWWGG 6 cut(s) 51, 312, 606, 1210, 2161, 3169
Bst2BI CACGAG 1 cut(s) 673
Bst2UI CCWGG 3 cut(s) 170, 1403, 2123
Bst6I CTCTTC 2 cut(s) 155, 1978
BstACI GRCGYC 3 cut(s) 616, 698, 2119
BstAPI GCANNNNNTGC 3 cut(s) 1046, 1247, 1655
BstC8I GCNNGC 9 cut(s) 48, 103, 795, 1020, 1497, 1853, 2662, 2845, 2881
BstDSI CCRYGG 4 cut(s) 51, 703, 1210, 3169
BstEII GGTNACC 1 cut(s) 2191
BstENI CCTNNNNNAGG 2 cut(s) 2583, 3255
BstFNI CGCG 1 cut(s) 1788
BstH2I RGCGCY 1 cut(s) 3241
BstHHI GCGC 2 cut(s) 1738, 3240
BstMAI GTCTC 8 cut(s) 394, 623, 1073, 1143, 2113, 2319, 3307, 3749
BstMCI CGRYCG 1 cut(s) 1284
BstNI CCWGG 3 cut(s) 170, 1403, 2123
BstNSI RCATGY 2 cut(s) 2847, 3809
BstPAI GACNNNNGTC 1 cut(s) 1724
BstPI GGTNACC 1 cut(s) 2191
BstSCI CCNGG 5 cut(s) 168, 1401, 2121, 2516, 2970
BstSFI CTRYAG 6 cut(s) 99, 901, 1599, 2169, 2352, 3660
BstSLI GKGCMC 2 cut(s) 2035, 3138
BstUI CGCG 1 cut(s) 1788
BstV2I GAAGAC 1 cut(s) 1143
BstX2I RGATCY 2 cut(s) 1831, 3148
BstXI CCANNNNNNTGG 1 cut(s) 1969
BstYI RGATCY 2 cut(s) 1831, 3148
Bsu36I CCTNAGG 1 cut(s) 1530
BsuI GTATCC 1 cut(s) 505
BsuRI GGCC 4 cut(s) 50, 1581, 1918, 2760
BtgI CCRYGG 4 cut(s) 51, 703, 1210, 3169
BtgZI GCGATG 2 cut(s) 548, 1769
BtsI GCAGTG 2 cut(s) 1782, 3720
BtsIMutI CAGTG 9 cut(s) 208, 390, 480, 1782, 2157, 2673, 3598, 3632, 3720
Cac8I GCNNGC 9 cut(s) 48, 103, 795, 1020, 1497, 1853, 2662, 2845, 2881
CaiI CAGNNNCTG 1 cut(s) 1673
CciI TCATGA 5 cut(s) 10, 972, 1909, 2493, 2616
CfoI GCGC 2 cut(s) 1738, 3240
Cfr10I RCCGGY 3 cut(s) 46, 998, 2045
Cfr13I GGNCC 3 cut(s) 1579, 2759, 3637
CseI GACGC 3 cut(s) 605, 687, 2127
Csp6I GTAC 7 cut(s) 134, 195, 328, 808, 2166, 2740, 3279
CspAI ACCGGT 1 cut(s) 2045
CviQI GTAC 7 cut(s) 134, 195, 328, 808, 2166, 2740, 3279
DraI TTTAAA 1 cut(s) 1617
DraIII CACNNNGTG 1 cut(s) 2030
EaeI YGGCCR 1 cut(s) 48
Eam1104I CTCTTC 2 cut(s) 155, 1978
EarI CTCTTC 2 cut(s) 155, 1978
EciI GGCGGA 1 cut(s) 945
Ecl136II GAGCTC 1 cut(s) 2994
Eco130I CCWWGG 6 cut(s) 51, 312, 606, 1210, 2161, 3169
Eco24I GRGCYC 3 cut(s) 2866, 2996, 3345
Eco32I GATATC 1 cut(s) 2220
Eco47I GGWCC 1 cut(s) 3637
Eco47III AGCGCT 1 cut(s) 3239
Eco53kI GAGCTC 1 cut(s) 2994
Eco57I CTGAAG 5 cut(s) 1491, 2064, 2739, 3098, 3323
Eco81I CCTNAGG 1 cut(s) 1530
Eco91I GGTNACC 1 cut(s) 2191
EcoICRI GAGCTC 1 cut(s) 2994
EcoNI CCTNNNNNAGG 2 cut(s) 2583, 3255
EcoO109I RGGNCCY 1 cut(s) 2759
EcoO65I GGTNACC 1 cut(s) 2191
EcoRII CCWGG 3 cut(s) 168, 1401, 2121
EcoRV GATATC 1 cut(s) 2220
EcoT14I CCWWGG 6 cut(s) 51, 312, 606, 1210, 2161, 3169
EcoT22I ATGCAT 1 cut(s) 2845
EcoT38I GRGCYC 3 cut(s) 2866, 2996, 3345
ErhI CCWWGG 6 cut(s) 51, 312, 606, 1210, 2161, 3169
Esp3I CGTCTC 1 cut(s) 623
FalI AAGNNNNNCTT 4 cut(s) 2097, 2129, 2225, 2257
FaqI GGGAC 2 cut(s) 685, 1548
FauNDI CATATG 1 cut(s) 3382
FbaI TGATCA 8 cut(s) 7, 243, 258, 387, 1906, 2440, 2730, 3762
FblI GTMKAC 1 cut(s) 3215
FriOI GRGCYC 3 cut(s) 2866, 2996, 3345
FspBI CTAG 7 cut(s) 1233, 1538, 1823, 2162, 2480, 2585, 3578
GlaI GCGC 2 cut(s) 1737, 3239
GsaI CCCAGC 2 cut(s) 2361, 2862
GsuI CTGGAG 1 cut(s) 414
HaeII RGCGCY 1 cut(s) 3241
HaeIII GGCC 4 cut(s) 50, 1581, 1918, 2760
HapII CCGG 9 cut(s) 47, 663, 999, 1193, 2046, 2517, 2972, 3025, 3057
HgaI GACGC 3 cut(s) 605, 687, 2127
HhaI GCGC 2 cut(s) 1738, 3240
Hin1I GRCGYC 3 cut(s) 616, 698, 2119
Hin6I GCGC 2 cut(s) 1736, 3238
HinP1I GCGC 2 cut(s) 1736, 3238
HincII GTYRAC 1 cut(s) 3216
HindII GTYRAC 1 cut(s) 3216
HindIII AAGCTT 2 cut(s) 553, 828
HpaII CCGG 9 cut(s) 47, 663, 999, 1193, 2046, 2517, 2972, 3025, 3057
HphI GGTGA 8 cut(s) 268, 613, 1337, 1565, 2740, 3343, 3503, 3730
Hpy166II GTNNAC 9 cut(s) 334, 707, 1419, 2387, 2410, 3216, 3464, 3494, 3518
Hpy8I GTNNAC 9 cut(s) 334, 707, 1419, 2387, 2410, 3216, 3464, 3494, 3518
HpyAV CCTTC 8 cut(s) 1447, 1959, 2248, 2395, 2750, 3073, 3386, 3550
HpyCH4IV ACGT 3 cut(s) 330, 453, 2065
HpySE526I ACGT 3 cut(s) 330, 453, 2065
Hsp92I GRCGYC 3 cut(s) 616, 698, 2119
HspAI GCGC 2 cut(s) 1736, 3238
Kpn2I TCCGGA 1 cut(s) 3056
KroI GCCGGC 1 cut(s) 46
KroNI GCCGGC 1 cut(s) 48
Ksp22I TGATCA 8 cut(s) 7, 243, 258, 387, 1906, 2440, 2730, 3762
LguI GCTCTTC 1 cut(s) 155
LmnI GCTCC 3 cut(s) 728, 1964, 3340
MaeI CTAG 7 cut(s) 1233, 1538, 1823, 2162, 2480, 2585, 3578
MaeII ACGT 3 cut(s) 330, 453, 2065
MaeIII GTNAC 2 cut(s) 670, 2191
MboII GAAGA 9 cut(s) 26, 142, 1148, 1484, 1625, 1920, 1995, 2666, 2732
MfeI CAATTG 3 cut(s) 1794, 2511, 2700
MflI RGATCY 2 cut(s) 1831, 3148
MhlI GDGCHC 9 cut(s) 522, 1660, 1751, 2035, 2866, 2996, 3138, 3345, 3598
MlyI GAGTC 5 cut(s) 2388, 2941, 3047, 3343, 3738
MmeI TCCRAC 5 cut(s) 706, 1237, 1697, 2449, 3172
Mph1103I ATGCAT 1 cut(s) 2845
MroI TCCGGA 1 cut(s) 3056
MroNI GCCGGC 1 cut(s) 46
MroXI GAANNNNTTC 2 cut(s) 1140, 2269
MslI CAYNNNNRTG 5 cut(s) 977, 1027, 1775, 3485, 3810
MspA1I CMGCKG 2 cut(s) 1366, 3301
MspI CCGG 9 cut(s) 47, 663, 999, 1193, 2046, 2517, 2972, 3025, 3057
MspR9I CCNGG 5 cut(s) 170, 1403, 2123, 2518, 2972
MunI CAATTG 3 cut(s) 1794, 2511, 2700
Mva1269I GAATGC 2 cut(s) 1765, 1900
MvaI CCWGG 3 cut(s) 170, 1403, 2123
MvnI CGCG 1 cut(s) 1788
NaeI GCCGGC 1 cut(s) 48
NciI CCSGG 2 cut(s) 2518, 2972
NcoI CCATGG 3 cut(s) 51, 1210, 3169
NdeI CATATG 1 cut(s) 3382
NgoMIV GCCGGC 1 cut(s) 46
NlaIV GGNNCC 6 cut(s) 1407, 1580, 1833, 2032, 3342, 3561
NmuCI GTSAC 1 cut(s) 670
NsiI ATGCAT 1 cut(s) 2845
NspI RCATGY 2 cut(s) 2847, 3809
OliI CACNNNNGTG 1 cut(s) 3485
PaeI GCATGC 1 cut(s) 2847
PagI TCATGA 5 cut(s) 10, 972, 1909, 2493, 2616
PciSI GCTCTTC 1 cut(s) 155
PctI GAATGC 2 cut(s) 1765, 1900
PdiI GCCGGC 1 cut(s) 48
PdmI GAANNNNTTC 2 cut(s) 1140, 2269
PfeI GAWTC 9 cut(s) 74, 164, 1130, 1215, 1670, 2270, 3041, 3254, 3608
PflMI CCANNNNNTGG 3 cut(s) 612, 1322, 2280
PinAI ACCGGT 1 cut(s) 2045
PleI GAGTC 5 cut(s) 2387, 2941, 3047, 3342, 3737
PpsI GAGTC 5 cut(s) 2387, 2941, 3047, 3342, 3737
PshAI GACNNNNGTC 1 cut(s) 1724
PshBI ATTAAT 2 cut(s) 1347, 2288
PsiI TTATAA 1 cut(s) 2561
Psp124BI GAGCTC 1 cut(s) 2996
Psp6I CCWGG 3 cut(s) 168, 1401, 2121
PspEI GGTNACC 1 cut(s) 2191
PspFI CCCAGC 2 cut(s) 2357, 2858
PspGI CCWGG 3 cut(s) 168, 1401, 2121
PspN4I GGNNCC 6 cut(s) 1407, 1580, 1833, 2032, 3342, 3561
PspPI GGNCC 3 cut(s) 1579, 2759, 3637
PstI CTGCAG 2 cut(s) 103, 905
PstNI CAGNNNCTG 1 cut(s) 1673
PsuI RGATCY 2 cut(s) 1831, 3148
PvuII CAGCTG 2 cut(s) 1366, 3301
RsaI GTAC 7 cut(s) 135, 196, 329, 809, 2167, 2741, 3280
RsaNI GTAC 7 cut(s) 134, 195, 328, 808, 2166, 2740, 3279
RseI CAYNNNNRTG 5 cut(s) 977, 1027, 1775, 3485, 3810
SacI GAGCTC 1 cut(s) 2996
SalI GTCGAC 1 cut(s) 3214
SapI GCTCTTC 1 cut(s) 155
Sau96I GGNCC 3 cut(s) 1579, 2759, 3637
SchI GAGTC 5 cut(s) 2388, 2941, 3047, 3343, 3738
ScrFI CCNGG 5 cut(s) 170, 1403, 2123, 2518, 2972
SduI GDGCHC 9 cut(s) 522, 1660, 1751, 2035, 2866, 2996, 3138, 3345, 3598
SfcI CTRYAG 6 cut(s) 99, 901, 1599, 2169, 2352, 3660
SinI GGWCC 1 cut(s) 3637
SmiMI CAYNNNNRTG 5 cut(s) 977, 1027, 1775, 3485, 3810
SmlI CTYRAG 2 cut(s) 323, 1744
SmoI CTYRAG 2 cut(s) 323, 1744
SphI GCATGC 1 cut(s) 2847
SsiI CCGC 5 cut(s) 930, 1741, 1788, 2002, 3000
SspI AATATT 3 cut(s) 1206, 1441, 2292
SspMI CTAG 7 cut(s) 1233, 1538, 1823, 2162, 2480, 2585, 3578
SstI GAGCTC 1 cut(s) 2996
StyD4I CCNGG 5 cut(s) 168, 1401, 2121, 2516, 2970
StyI CCWWGG 6 cut(s) 51, 312, 606, 1210, 2161, 3169
TaiI ACGT 3 cut(s) 333, 456, 2068
TaqI TCGA 7 cut(s) 1280, 2447, 2610, 2866, 3215, 3655, 3771
TaqII GACCGA 1 cut(s) 3654
TatI WGTACW 1 cut(s) 807
TauI GCSGC 2 cut(s) 2004, 3002
TfiI GAWTC 9 cut(s) 74, 164, 1130, 1215, 1670, 2270, 3041, 3254, 3608
TscAI CASTG 9 cut(s) 208, 397, 487, 1782, 2157, 2680, 3598, 3639, 3720
TseFI GTSAC 1 cut(s) 670
Tsp45I GTSAC 1 cut(s) 670
TspGWI ACGGA 1 cut(s) 2372
TspRI CASTG 9 cut(s) 208, 397, 487, 1782, 2157, 2680, 3598, 3639, 3720
Van91I CCANNNNNTGG 3 cut(s) 612, 1322, 2280
VpaK11BI GGWCC 1 cut(s) 3637
VspI ATTAAT 2 cut(s) 1347, 2288
XagI CCTNNNNNAGG 2 cut(s) 2583, 3255
XapI RAATTY 1 cut(s) 1629
XceI RCATGY 2 cut(s) 2847, 3809
XcmI CCANNNNNNNNNTGG 1 cut(s) 2680
XmaJI CCTAGG 1 cut(s) 2161
XmiI GTMKAC 1 cut(s) 3215
XmnI GAANNNNTTC 2 cut(s) 1140, 2269
XspI CTAG 7 cut(s) 1233, 1538, 1823, 2162, 2480, 2585, 3578
Zsp2I ATGCAT 1 cut(s) 2845
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.