Rh3DG301600

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Reverse (-)
31785372 .. 31790636
5265 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG301600.1

Sequence Viewer

Length: 2535 bp
ATGGCTGAGGAGAATGGGGTGAATGGTGATACCAAAAATCATGAAAACCATGCAGAAGAAGAGAAAAGCTCAGCCTCCATAAATAGGGATCAGCCAGGCTCATCAGATAGCAATGGAGATGAGAAAGTTGAAAAGATTCCTTTCTCCAAGCTATTCTCCTTTGCAGATAAGACTGATGTTATCTTGATGGTTGTCGGCACGATTGGTGCCATTGGGAATGGTTCTTGTATGCCCCTCATGACGGTATTGTTTGGGGAGATGATAGATTCTTTTGGATCTAATCAAAATTCAGACATAGTCTCAGTTGTTTCAAAGGTCTCTCTGAAATTTGTTTACCTGGCTGTGGGAGTAGCTGTGGCAGCATTTCTCCAGGTGTCTTGTTGGATGGTCACAGGGGAAAGACAAGCTGCAAGAATTAGAGGTTTGTATTTGAAAACAATATTGAGACAAGATGTTGCTTTCTTCGATATGGAAACAAACACTGGAGAGGTAGTTGGGAGAATGTCTGGTGACACTGTTCTCATTCAAGATGCCATGGGGGAGAAGGTTGGAAAATTCTTACAGCTGCTTGCAACATTCATTGGAGGGTTTATAATAGCATTCATCAAAGGGTGGCTTCTCACTCTTGTCATGCTATCCTCTATTCCTTTGCTTGTGGCATCTGGTGCAACGATGTCCATCATTATAACCAAGATGGCATCCCGTGGACAAACTGCTTACGCAAAAGCAGCAAATGTAGTTGAACAAACAATTGGGTCCATTAGAACCGTTGCATCATTTACTGGCGAGAGGGAAGCTATAACTAGTTATAACAAATATCTCGTAGATGCTTACAAATCAGGTGTTCATGAAGGTTCAGCTGCTGGAATAGGTCTTGGCTTGGTTATGTGTGTTGTGTTCAGCACATATGCCTTGGCTGTATGGTTTGGTTCAAAGATGATAAGGGAAAATGGATATACTGGGGGTGAAGTACTGAATGTGATTGTTGCTGTGTTGACTGGATCTATGTCTTTAGGGCAGACATCACCATGCATGAGTGCATTTGCTGCTGGTCAAGCTGCAGCTTATAAGATGTTTCAGACTATTAGTAGGAAGCCAGAAATAGATGCTTATGATGAAAAGGGAAAGACTTTGGGTGACATTTCGGGAGACATAGAGTTGAGAGATGTTTATTTCAGCTATCCAGCCAGACCGGATGAGCAAATATTTGACGGGTTCTCTCTTTGTATCCCTAGTGGCACAACTGCTGCTTTGGTTGGACAAAGTGGAAGTGGCAAGTCAACAGTCATCAGTCTGATAGAGAGATTTTATGATCCGCAAGCTGGTGAAGTTTTAATAGATGGCATAAACCTAAAAGAATTTCAACTTAAATGGATTCGGAGTAAAATTGGTCTTGTCAGTCAGGAACCTGTCCTGTTTGCATCCAGCATTAAGGAAAATATTGCCTATGGAAAGGATGGTGCTACCACTGAAGAGATACAAGCAGCAGCTGAGCTTGCAAATGCGGCTAAATTTGTTGATAAATTGCCTCAGGGCCTTGACAGCTTGGTCGGTGAGCATGGAACTCAGCTGTCTGGCGGGCAGAAGCAGAGAATTGCTATTGCAAGAGCAATTTTGAAAGACCCAAGGATTTTACTTCTGGATGAAGCTACAAGTGCACTTGATGCAGAATCTGAGAGGGTAGTTCAAGAAGCATTGGATAGGATTATGGTTAACCGAACTACTGTTGTTGTCGCTCATCGTTTGAGTTCAGTGAGGAATGCAGACATGATTGCTGTCATTCATAAAGGAAAGATGGTTGAAAAAGGTTCGCACTTGAATTTACTCAAAAATCCTGAGGGAGCTTACTCTCAGCTTATACGCTTGCAAGAAGTAAACAAAGAGTCAGAACAAACGTCAGAAGACCAAAACAAACCTGAAATAACTCTGGCATGTCTTAGACAGTCAAGTCAAAGAACATCAAGTCAAAGACTTTCGTTTGCACGATCCTTAAGTAGAAATTCCTCCGTAGGAAATAGCAGCCGTCACTCATATTCAGTGGCATTTGGTTTACCCACTGGACTTGGTGTCCAAGATGCTGCATATGAAGAAACAGAACTAGCACCAGAGCAACCTCCAAAGGTCTCACTCCGCCGCATTGCTGCCCTGAACAAACCTGAGATTCCAGTTCTTATTATTGGAACTATAGCTGCAATCATCAATGGTGTTATACTTCCAATATTCGGTGTGCTCATTTCCAGGGTTATAAAGACTTTCTATGAACCACCTCATCAACAGAAGAAAGATGCAGCATTTTGGGCAATAATTTTTATGATCCTTGGTCTGATATCATTCGTGGCGATCCCAGCACAAGGATATTTCTTTTCAGTAGCTGGAAGCAAGTTAATTCGGCGTATCAGATTATTGTGTTTTGAGAGAGTGGTTCGCATGGAGGTTGGGTGGTTTGTAAAAGACAATGGAGCCAGAATGATTTCAGTATATTTGATAATGAAGTTACATGGCTCTATATATAGAGATCTGTATAGCAGAAGATAA

Protein Analysis

844

Amino Acids

91.68

Weight (kDa)

7.58

Isoelectric Point (pI)

38.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 64 - 336 3e-59 ABC transporter transmembrane region
ABC_tran PF00005 404 - 552 1.7e-33 ABC transporter
ABC_membrane PF00664 724 - 817 4.6e-15 ABC transporter transmembrane region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 5 cut(s) 593, 686, 810, 1068, 2246
AasI GACNNNNNNGTC 2 cut(s) 1547, 1947
AccB1I GGYRCC 1 cut(s) 206
AciI CCGC 5 cut(s) 1316, 1505, 1578, 2131, 2134
AclWI GGATC 7 cut(s) 96, 283, 1009, 1307, 1980, 2308, 2335
AcsI RAATTY 7 cut(s) 286, 326, 554, 1358, 1511, 1819, 1999
AcuI CTGAAG 1 cut(s) 1491
AfaI GTAC 1 cut(s) 972
AfiI CCNNNNNNNGG 6 cut(s) 84, 241, 343, 1322, 2222, 2351
AflII CTTAAG 1 cut(s) 1990
AhdI GACNNNNNGTC 1 cut(s) 2066
AhlI ACTAGT 1 cut(s) 803
AjnI CCWGG 4 cut(s) 94, 336, 369, 2237
AjuI GAANNNNNNNTTGG 2 cut(s) 735, 767
Alw21I GWGCWC 2 cut(s) 1660, 2232
Alw26I GTCTC 5 cut(s) 304, 322, 439, 1143, 2128
Alw44I GTGCAC 1 cut(s) 1656
AlwI GGATC 7 cut(s) 96, 283, 1009, 1307, 1980, 2308, 2335
AlwNI CAGNNNCTG 4 cut(s) 863, 1490, 1673, 2372
AoxI GGCC 1 cut(s) 1534
ApaLI GTGCAC 1 cut(s) 1656
ApoI RAATTY 7 cut(s) 286, 326, 554, 1358, 1511, 1819, 1999
Asp700I GAANNNNTTC 2 cut(s) 135, 2470
AspS9I GGNCC 2 cut(s) 756, 1534
AsuHPI GGTGA 8 cut(s) 31, 38, 521, 977, 1017, 1148, 1337, 1565
AvaII GGWCC 1 cut(s) 756
AxyI CCTNAGG 2 cut(s) 1530, 1836
BaeGI GKGCMC 1 cut(s) 1660
BanI GGYRCC 1 cut(s) 206
BbsI GAAGAC 1 cut(s) 1908
Bbv12I GWGCWC 2 cut(s) 1660, 2232
BbvCI CCTCAGC 1 cut(s) 6
BccI CCATC 7 cut(s) 181, 379, 686, 688, 1334, 1451, 1789
BceAI ACGGC 1 cut(s) 2007
BciT130I CCWGG 4 cut(s) 96, 338, 371, 2239
BciVI GTATCC 1 cut(s) 1238
BcoDI GTCTC 5 cut(s) 304, 322, 439, 1143, 2128
BcuI ACTAGT 1 cut(s) 803
BfaI CTAG 3 cut(s) 804, 1233, 2099
BfmI CTRYAG 2 cut(s) 1059, 2184
BfrI CTTAAG 1 cut(s) 1990
BfuI GTATCC 1 cut(s) 1238
BglII AGATCT 1 cut(s) 2515
BlpI GCTNAGC 2 cut(s) 70, 1491
BmcAI AGTACT 1 cut(s) 972
Bme1390I CCNGG 4 cut(s) 96, 338, 371, 2239
Bme18I GGWCC 1 cut(s) 756
BmeRI GACNNNNNGTC 1 cut(s) 2066
BmgT120I GGNCC 2 cut(s) 756, 1534
BmiI GGNNCC 4 cut(s) 208, 757, 1407, 2461
BmrFI CCNGG 4 cut(s) 96, 338, 371, 2239
BmrI ACTGGG 1 cut(s) 969
BmuI ACTGGG 1 cut(s) 969
BpiI GAAGAC 1 cut(s) 1908
BplI GAGNNNNNCTC 2 cut(s) 53, 85
BpmI CTGGAG 2 cut(s) 353, 504
Bpu10I CCTNAGC 1 cut(s) 6
Bpu1102I GCTNAGC 2 cut(s) 70, 1491
BsaBI GATNNNNATC 1 cut(s) 677
BsaI GGTCTC 2 cut(s) 322, 2128
BsaJI CCNNGG 6 cut(s) 534, 703, 912, 1625, 2238, 2317
BsaWI WCCGGW 1 cut(s) 1192
BsaXI ACNNNNNCTCC 6 cut(s) 339, 369, 477, 507, 2423, 2453
Bsc4I CCNNNNNNNGG 6 cut(s) 84, 241, 343, 1322, 2222, 2351
Bse1I ACTGG 6 cut(s) 487, 787, 964, 1003, 2062, 2165
Bse21I CCTNAGG 2 cut(s) 1530, 1836
Bse3DI GCAATG 2 cut(s) 118, 2136
Bse8I GATNNNNATC 1 cut(s) 677
BseBI CCWGG 4 cut(s) 96, 338, 371, 2239
BseDI CCNNGG 6 cut(s) 534, 703, 912, 1625, 2238, 2317
BseGI GGATG 6 cut(s) 390, 698, 1201, 1421, 1462, 1648
BseJI GATNNNNATC 1 cut(s) 677
BseLI CCNNNNNNNGG 6 cut(s) 84, 241, 343, 1322, 2222, 2351
BseMI GCAATG 2 cut(s) 118, 2136
BseMII CTCAG 9 cut(s) 84, 315, 1482, 1544, 1580, 1665, 1827, 1865, 2148
BseNI ACTGG 6 cut(s) 487, 787, 964, 1003, 2062, 2165
BseRI GAGGAG 1 cut(s) 23
BseSI GKGCMC 1 cut(s) 1660
BseYI CCCAGC 1 cut(s) 2344
BshFI GGCC 1 cut(s) 1536
BshNI GGYRCC 1 cut(s) 206
BsiHKAI GWGCWC 2 cut(s) 1660, 2232
BsiSI CCGG 1 cut(s) 1193
BslI CCNNNNNNNGG 6 cut(s) 84, 241, 343, 1322, 2222, 2351
BsmAI GTCTC 5 cut(s) 304, 322, 439, 1143, 2128
BsmI GAATGC 2 cut(s) 599, 1765
BsnI GGCC 1 cut(s) 1536
Bso31I GGTCTC 2 cut(s) 322, 2128
Bsp1286I GDGCHC 2 cut(s) 1660, 2232
Bsp143I GATC 8 cut(s) 88, 275, 1001, 1312, 1985, 2313, 2340, 2515
Bsp1720I GCTNAGC 2 cut(s) 70, 1491
Bsp19I CCATGG 1 cut(s) 534
BspACI CCGC 5 cut(s) 1316, 1505, 1578, 2131, 2134
BspANI GGCC 1 cut(s) 1536
BspCNI CTCAG 9 cut(s) 83, 314, 1483, 1543, 1579, 1666, 1828, 1864, 2149
BspHI TCATGA 3 cut(s) 40, 237, 847
BspLI GGNNCC 4 cut(s) 208, 757, 1407, 2461
BspMAI CTGCAG 1 cut(s) 1063
BspPI GGATC 7 cut(s) 96, 283, 1009, 1307, 1980, 2308, 2335
BspT107I GGYRCC 1 cut(s) 206
BspTI CTTAAG 1 cut(s) 1990
BspTNI GGTCTC 2 cut(s) 322, 2128
BsrDI GCAATG 2 cut(s) 118, 2136
BsrI ACTGG 6 cut(s) 487, 787, 964, 1003, 2062, 2165
BssECI CCNNGG 6 cut(s) 534, 703, 912, 1625, 2238, 2317
BssMI GATC 8 cut(s) 88, 275, 1001, 1312, 1985, 2313, 2340, 2515
BssT1I CCWWGG 4 cut(s) 534, 912, 1625, 2317
Bst2UI CCWGG 4 cut(s) 96, 338, 371, 2239
Bst4CI ACNGT 6 cut(s) 244, 517, 769, 1285, 1726, 1944
Bst6I CTCTTC 2 cut(s) 54, 1467
BstAFI CTTAAG 1 cut(s) 1990
BstAPI GCANNNNNTGC 3 cut(s) 665, 1046, 1664
BstC8I GCNNGC 5 cut(s) 570, 1320, 1497, 1580, 1865
BstDSI CCRYGG 2 cut(s) 534, 703
BstF5I GGATG 6 cut(s) 390, 698, 1201, 1421, 1462, 1648
BstKTI GATC 8 cut(s) 91, 278, 1004, 1315, 1988, 2316, 2343, 2518
BstMAI GTCTC 5 cut(s) 304, 322, 439, 1143, 2128
BstMBI GATC 8 cut(s) 88, 275, 1001, 1312, 1985, 2313, 2340, 2515
BstNI CCWGG 4 cut(s) 96, 338, 371, 2239
BstNSI RCATGY 1 cut(s) 1935
BstSCI CCNGG 4 cut(s) 94, 336, 369, 2237
BstSFI CTRYAG 2 cut(s) 1059, 2184
BstSLI GKGCMC 1 cut(s) 1660
BstV2I GAAGAC 1 cut(s) 1908
BstX2I RGATCY 3 cut(s) 275, 1001, 2515
BstYI RGATCY 3 cut(s) 275, 1001, 2515
Bsu36I CCTNAGG 2 cut(s) 1530, 1836
BsuI GTATCC 1 cut(s) 1238
BsuRI GGCC 1 cut(s) 1536
BtgI CCRYGG 2 cut(s) 534, 703
BtsCI GGATG 6 cut(s) 390, 698, 1201, 1421, 1462, 1648
BtsIMutI CAGTG 6 cut(s) 480, 513, 1467, 1758, 2043, 2055
Cac8I GCNNGC 5 cut(s) 570, 1320, 1497, 1580, 1865
CaiI CAGNNNCTG 4 cut(s) 863, 1490, 1673, 2372
CciI TCATGA 3 cut(s) 40, 237, 847
Cfr13I GGNCC 2 cut(s) 756, 1534
Csp6I GTAC 1 cut(s) 971
CspCI CAANNNNNGTGG 2 cut(s) 2044, 2079
CviQI GTAC 1 cut(s) 971
DpnI GATC 8 cut(s) 90, 277, 1003, 1314, 1987, 2315, 2342, 2517
DpnII GATC 8 cut(s) 88, 275, 1001, 1312, 1985, 2313, 2340, 2515
DrdI GACNNNNNNGTC 2 cut(s) 1547, 1947
DriI GACNNNNNGTC 1 cut(s) 2066
DseDI GACNNNNNNGTC 2 cut(s) 1547, 1947
Eam1104I CTCTTC 2 cut(s) 54, 1467
Eam1105I GACNNNNNGTC 1 cut(s) 2066
EarI CTCTTC 2 cut(s) 54, 1467
EciI GGCGGA 1 cut(s) 2120
Eco130I CCWWGG 4 cut(s) 534, 912, 1625, 2317
Eco31I GGTCTC 2 cut(s) 322, 2128
Eco32I GATATC 1 cut(s) 2328
Eco47I GGWCC 1 cut(s) 756
Eco57I CTGAAG 1 cut(s) 1491
Eco81I CCTNAGG 2 cut(s) 1530, 1836
EcoO109I RGGNCCY 1 cut(s) 1534
EcoRII CCWGG 4 cut(s) 94, 336, 369, 2237
EcoRV GATATC 1 cut(s) 2328
EcoT14I CCWWGG 4 cut(s) 534, 912, 1625, 2317
EcoT22I ATGCAT 1 cut(s) 1034
ErhI CCWWGG 4 cut(s) 534, 912, 1625, 2317
FalI AAGNNNNNCTT 2 cut(s) 600, 632
FauI CCCGC 1 cut(s) 1571
FauNDI CATATG 2 cut(s) 907, 2083
FokI GGATG 6 cut(s) 397, 685, 1208, 1408, 1469, 1655
FspBI CTAG 3 cut(s) 804, 1233, 2099
GsaI CCCAGC 1 cut(s) 2348
GsuI CTGGAG 2 cut(s) 353, 504
HaeIII GGCC 1 cut(s) 1536
HapII CCGG 1 cut(s) 1193
HincII GTYRAC 3 cut(s) 996, 1281, 1714
HindII GTYRAC 3 cut(s) 996, 1281, 1714
HinfI GANTC 6 cut(s) 136, 266, 1375, 1670, 1883, 2161
HpaI GTTAAC 1 cut(s) 1714
HpaII CCGG 1 cut(s) 1193
HphI GGTGA 8 cut(s) 31, 38, 521, 977, 1017, 1148, 1337, 1565
Hpy166II GTNNAC 8 cut(s) 334, 707, 996, 1281, 1658, 1714, 1876, 2051
Hpy8I GTNNAC 8 cut(s) 334, 707, 996, 1281, 1658, 1714, 1876, 2051
HpyAV CCTTC 2 cut(s) 538, 845
HpyCH4III ACNGT 6 cut(s) 244, 517, 769, 1285, 1726, 1944
HpyCH4IV ACGT 1 cut(s) 1895
HpySE526I ACGT 1 cut(s) 1895
KspAI GTTAAC 1 cut(s) 1714
Kzo9I GATC 8 cut(s) 88, 275, 1001, 1312, 1985, 2313, 2340, 2515
LmnI GCTCC 2 cut(s) 1841, 2459
MaeI CTAG 3 cut(s) 804, 1233, 2099
MaeII ACGT 1 cut(s) 1895
MaeIII GTNAC 5 cut(s) 388, 509, 1136, 2024, 2493
MalI GATC 8 cut(s) 90, 277, 1003, 1314, 1987, 2315, 2342, 2517
MboI GATC 8 cut(s) 88, 275, 1001, 1312, 1985, 2313, 2340, 2515
MboII GAAGA 7 cut(s) 68, 71, 454, 1484, 1913, 2099, 2290
MfeI CAATTG 1 cut(s) 750
MflI RGATCY 3 cut(s) 275, 1001, 2515
MhlI GDGCHC 2 cut(s) 1660, 2232
MlyI GAGTC 1 cut(s) 1892
MmeI TCCRAC 3 cut(s) 362, 529, 1237
Mph1103I ATGCAT 1 cut(s) 1034
MroXI GAANNNNTTC 2 cut(s) 135, 2470
MseI TTAA 6 cut(s) 1334, 1368, 1431, 1713, 1991, 2384
MslI CAYNNNNRTG 1 cut(s) 1027
MspA1I CMGCKG 4 cut(s) 565, 860, 1490, 1570
MspCI CTTAAG 1 cut(s) 1990
MspI CCGG 1 cut(s) 1193
MspR9I CCNGG 4 cut(s) 96, 338, 371, 2239
MunI CAATTG 1 cut(s) 750
Mva1269I GAATGC 2 cut(s) 599, 1765
MvaI CCWGG 4 cut(s) 96, 338, 371, 2239
NcoI CCATGG 1 cut(s) 534
NdeI CATATG 2 cut(s) 907, 2083
NdeII GATC 8 cut(s) 88, 275, 1001, 1312, 1985, 2313, 2340, 2515
NlaIV GGNNCC 4 cut(s) 208, 757, 1407, 2461
NmuCI GTSAC 4 cut(s) 388, 509, 1136, 2024
NsiI ATGCAT 1 cut(s) 1034
NspI RCATGY 1 cut(s) 1935
PagI TCATGA 3 cut(s) 40, 237, 847
PctI GAATGC 2 cut(s) 599, 1765
PdmI GAANNNNTTC 2 cut(s) 135, 2470
PfeI GAWTC 5 cut(s) 136, 266, 1375, 1670, 2161
PflFI GACNNNGTC 1 cut(s) 296
PleI GAGTC 1 cut(s) 1891
PpsI GAGTC 1 cut(s) 1891
PsiI TTATAA 5 cut(s) 593, 686, 810, 1068, 2246
Psp6I CCWGG 4 cut(s) 94, 336, 369, 2237
PspFI CCCAGC 1 cut(s) 2344
PspGI CCWGG 4 cut(s) 94, 336, 369, 2237
PspN4I GGNNCC 4 cut(s) 208, 757, 1407, 2461
PspPI GGNCC 2 cut(s) 756, 1534
PstI CTGCAG 1 cut(s) 1063
PstNI CAGNNNCTG 4 cut(s) 863, 1490, 1673, 2372
PsuI RGATCY 3 cut(s) 275, 1001, 2515
PsyI GACNNNGTC 1 cut(s) 296
PvuII CAGCTG 4 cut(s) 565, 860, 1490, 1570
RsaI GTAC 1 cut(s) 972
RsaNI GTAC 1 cut(s) 971
RseI CAYNNNNRTG 1 cut(s) 1027
SaqAI TTAA 6 cut(s) 1334, 1368, 1431, 1713, 1991, 2384
Sau3AI GATC 8 cut(s) 88, 275, 1001, 1312, 1985, 2313, 2340, 2515
Sau96I GGNCC 2 cut(s) 756, 1534
ScaI AGTACT 1 cut(s) 972
SchI GAGTC 1 cut(s) 1892
ScrFI CCNGG 4 cut(s) 96, 338, 371, 2239
SduI GDGCHC 2 cut(s) 1660, 2232
SfcI CTRYAG 2 cut(s) 1059, 2184
SinI GGWCC 1 cut(s) 756
SmiMI CAYNNNNRTG 1 cut(s) 1027
SmlI CTYRAG 1 cut(s) 1990
SmoI CTYRAG 1 cut(s) 1990
SpeI ACTAGT 1 cut(s) 803
SsiI CCGC 5 cut(s) 1316, 1505, 1578, 2131, 2134
SspI AATATT 4 cut(s) 441, 1206, 1441, 2220
SspMI CTAG 3 cut(s) 804, 1233, 2099
StyD4I CCNGG 4 cut(s) 94, 336, 369, 2237
StyI CCWWGG 4 cut(s) 534, 912, 1625, 2317
TaaI ACNGT 6 cut(s) 244, 517, 769, 1285, 1726, 1944
TaiI ACGT 1 cut(s) 1898
TaqI TCGA 1 cut(s) 465
TatI WGTACW 1 cut(s) 970
TauI GCSGC 2 cut(s) 1508, 2136
TfiI GAWTC 5 cut(s) 136, 266, 1375, 1670, 2161
Tru1I TTAA 6 cut(s) 1334, 1368, 1431, 1713, 1991, 2384
Tru9I TTAA 6 cut(s) 1334, 1368, 1431, 1713, 1991, 2384
TscAI CASTG 6 cut(s) 487, 520, 1474, 1758, 2043, 2062
TseFI GTSAC 4 cut(s) 388, 509, 1136, 2024
Tsp45I GTSAC 4 cut(s) 388, 509, 1136, 2024
TspGWI ACGGA 1 cut(s) 1996
TspRI CASTG 6 cut(s) 487, 520, 1474, 1758, 2043, 2062
Tth111I GACNNNGTC 1 cut(s) 296
Vha464I CTTAAG 1 cut(s) 1990
VneI GTGCAC 1 cut(s) 1656
VpaK11BI GGWCC 1 cut(s) 756
XapI RAATTY 7 cut(s) 286, 326, 554, 1358, 1511, 1819, 1999
XceI RCATGY 1 cut(s) 1935
XmnI GAANNNNTTC 2 cut(s) 135, 2470
XspI CTAG 3 cut(s) 804, 1233, 2099
ZrmI AGTACT 1 cut(s) 972
Zsp2I ATGCAT 1 cut(s) 1034
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.