FvH4_4g21381

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
24432372 .. 24437978
5607 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g21381.t1

Sequence Viewer

Length: 3495 bp
ATGTCTTGCTGGATGATCACCGGAGAGAGACAGGCTGCACAAATACGATGTTTATACTTGAAAACAATATTGAGACAAGATGTTAGTTTTTTCGATAAAGAAGCCAACACTGGAGAAATTGTTGGGAGAATGTCAGGTGATACTGTGCTTATTCAAGAGGCCATGGGGGAAAAAGTAGGAACTTTTATCCAGTTGGTTGCTACATTTATAGCAGGTTTTGTTATAGCATTTATCAAGGGATGGCATCTCACCCTTGTCCTGCTCACCTCTATTCCCCCTCTTGTCCTTTCTGGAGCTCTCATCAGCCTCACTATAAGGAAATTGGCATCCCGCGGACAAGCTGCTTATTCTATTGGGGCTAATGTGGTAGAGCAGACAATTGGTTCAATCAGAACTGTTGTGTCATTTACCGGGGAGAAGAAAGCTATAACTAAGTACAACAACTCCTTAACTAAAGCTTACAAGTCTGGCGTACAAGAGGGTTTAGCATCAGGAGTGGGTCTTGGTACGGTTCTTTGTACTATATTCTGCAGTTATGCATTGGCTATTTGGTATGGCGGCAAAATGATACTTGAAAAAGGGTACAATGGAGGCGATGTCATTAATGTTATTTTTGCTGTCTTGACTGGTTCTTTCTCTCTTGGGCAAGCATCTCCATGCGTGAGTGCATTTTCCTCTGGACAAGCTGCAGCTTATAAGATGTTCGAGACAATTAACAGAAAGCCAATTATAGATGTGTATGACACCAGAGGACTAAAATCACAAGAGATCAAAGGAGATATTGAACTGAGGGATGTTTATTTTAGTTATCCAGCAAGACCAGATGAGCAAATATTTATTGGATTTTCTCTCTCAATACCTAGTGGTGCAACTGCTGCTTTAGTTGGACAAAGTGGAAGTGGTAAATCAACTGTCATCAGTTTGATTGAAAGATATTATGACCCCCAAGCTGGTGAAATTCTTATTGATGGGATTAATCTAAAGGAGTTCCAACTGAAATGGATCAGAGAGAAAATAGGCCTTGTTAGCCAGGAACCAGTTTTGTTTAGTGGCAGCATTAAAGATAATATTGCCTATGGAAAAGATGGTGCAACAACTGAGGAAACGAGGGCTGCAGCTGAGCTGGCCAATGCTGATAAATTCATAGACAAACTGCCTCAGGGACTAGATACAATGGTTGGTGAGCATGGAACTCAGCTATCCGGGGGTCAAAAGCAGAGAGTTGCAATAGCAAGAGCAATTCTTAAGAACCCGAAAATTTTACTCTTGGATGAGGCCACAAGCGCTCTGGACGCAGAATCCGAGAGAGTTGTGCAAGAGGCATTGGACAGAATAATGGTTAACAGGACTACAATCATTGTAGCTCACCGCTTGAGCACAGTGAGGAATGCTGATACCATTGCAGTGATACATCGTGGAAAAATTGTTGAGAAAGCAGGACTACATACTGAGCTAGTTAAAGATCCAGATGGTGCATATAGCCAATTAATAAGGTTGCAAGAAATTAACAGTATATCAGAACATCAGGCTCAAAATAATCACGAAAGGCCAGAACTTTCCTCAAGTTTCCGGAAACTTTCTTCTTTGAGATCCATAAGTCAGAGGTCATCAGAAATAGGAAATAGTAGTCGACGTAGTCACTCATTTTCAATCTCTCATGGTGCCCTTACTGTGACCGGTATCCATGAAATAACACCTGCTGAACCTGACATTCCAGCTGTAACATCAGAAGTGCATCCAGAAGTCTCACTTAGCCGCCTGGCTTACCTAAATAAGACAGAAATCCCAATACTACTTTTAGGTACTATAGGGGCAGCAATGTGTGGTGTAATCTTACCTATTTTTGGGGTGCTAATATCAAGCGTAATCAAGTGCTTCTTTGATCCACCTCATCAACTCAGAAAGGACTCGAAGTTTTGGGCATTAATCTTCGTTGTTCTTGGAGTGGCAGCTCTCTTGGCACATCCAATGAGAGCATACTTTTTTGCTGTGGCAGGCTGTAAGTTAATAAGACGAGTACGATCGCTTTGCTTTGAGAAGGTGGTTTACATGGAAGCAAGTTGGTTTGATGAAGCCGAGCACTCAAGTGGTGCAATTGGTGCAAGGCTTTCAGGGAATGCAGCTTCTCTGCGAGGGCTGGTTGGAGATGCTCTCAGTTTGGCTGTGATGAATACATCAACTGCAATTGCTGGCTTTATTATTGCTTTTATGGCAAATTGGCAACTTGCTTTTATTATGCTTTTTATGCTGCCTCTACTAGGAATAAGTGGATATTTTCAAATGGAGATATTGAAAGGATTAAGTGCAAATGCAAAGATCATGTACGAAGATGCAAGCCAAGTAGCTACCGATGCTGTGGGAAGTATTAGAACAATTGCTTCCTTTTGTGCTGAAGAAAAGATTACCAAGTTGTACCAAACAAAATGTGAAGGTCCTATCAAGGCAGGGATAAGGCAAGGTATAGTTAGTGGTATAGGCTTTGGGCTATCATTTTTCTTGCTCTTTTCTGTATACGCATGCAGTTTCTATGCTGGCGCACGACTTGTTGGAGCAGGCAAGACGACGTTCCAAGATGTTTTTCGGGTTTTCTTTGCTCTCACTATGACAGCTATCGCACTGTCTCAACAGAGTTCCTTTGCCCCTGATGCAAGTAAAGGAAAGAGCTCTGCTGCTTCTTTATTTGCAATTATTGACCGGAAATCAAAAATAGATGCTAGTGATAACTCTGGGACAACTATAGAAAACTTGAAGGGAGAAATTGAATTTCGCCATATTAGTTTCAAGTATCCAAATAGACCTAATGTACCAATCTTCCAGGATTTGTGCTTGACCATTCACTATGGGAAGACAGTTGCTCTGGTAGGAGAAAGTGGAAGTGGCAAATCGACAGTGATCTCATTGCTGCAGAGATTTTACGATCCTGACTCGGGTTACATTACATTAGACGGTACCAAAATGCAAACATTACAGCTGAAGTGGTTGAGGCAACAAATGGGGTTGGTCAGCCAGGAGCCTCTGCTTTTTAATGACACTATAAGAGCCAACATTGCATATGGTAAGGATGGGAGTGCAACCGAGACTGAAATTATAGCAGCAGCAGAATTGGCAAATGCTCACAAGTTCATTAGTAGTTTACAACAGGGTTATGATACAATAGTAGGTGAACGAGGGGTTCAACTTTCTGGTGGACAGAAGCAAAGGGTAGCTATTGCAAGAGCTATAATGAAGGCACCAAAGATATTACTTCTAGATGAAGCCACCAGTGCCCTTGATGCTGAATCTGAACGAGTAGTTCAAGATGCACTGGACCAGGTTATGGTGGATCAAACTACAGTGGTGGTTGCGCATCGGCTATCCACGATTAAAGGTGCAAATTTAATAGCAGTTGTGAAAAATGGAGTCATTGCTGAGAAAGGAAAGCATGAGACTTTGATCAGTATCGAAGGTGGAACTTATGCTTCTTTGGTAGCACTACATGCAAGTACGTCATCTTAG

Protein Analysis

1165

Amino Acids

125.77

Weight (kDa)

8.51

Isoelectric Point (pI)

32.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 2 - 212 1.3e-49 ABC transporter transmembrane region
ABC_tran PF00005 282 - 428 6.2e-34 ABC transporter
ABC_membrane PF00664 598 - 870 3.1e-54 ABC transporter transmembrane region
ABC_tran PF00005 939 - 1088 2.9e-34 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 696
AarI CACCTGC 1 cut(s) 1705
Acc16I TGCGCA 1 cut(s) 3345
Acc36I ACCTGC 2 cut(s) 203, 1705
Acc65I GGTACC 1 cut(s) 2948
AccB1I GGYRCC 3 cut(s) 1661, 2948, 3229
AccB7I CCANNNNNTGG 1 cut(s) 3316
AccI GTMKAC 2 cut(s) 1630, 2511
AccII CGCG 1 cut(s) 333
AccIII TCCGGA 1 cut(s) 1569
AciI CCGC 5 cut(s) 331, 333, 558, 1369, 1756
AclWI GGATC 6 cut(s) 1010, 1457, 1584, 1877, 2912, 3330
AcoI YGGCCR 1 cut(s) 1125
AcsI RAATTY 5 cut(s) 957, 1139, 1257, 2762, 3373
AcuI CTGAAG 2 cut(s) 2412, 2993
AfeI AGCGCT 1 cut(s) 1285
AfiI CCNNNNNNNGG 5 cut(s) 950, 1844, 2258, 2927, 3316
AflII CTTAAG 1 cut(s) 1244
AgeI ACCGGT 1 cut(s) 1676
AjnI CCWGG 5 cut(s) 1029, 1758, 2814, 3006, 3309
AjuI GAANNNNNNNTTGG 2 cut(s) 2562, 2594
AleI CACNNNNGTG 1 cut(s) 2085
Alw21I GWGCWC 4 cut(s) 298, 1379, 2082, 2666
Alw26I GTCTC 7 cut(s) 22, 67, 701, 1750, 2625, 3071, 3419
AlwI GGATC 6 cut(s) 1010, 1457, 1584, 1877, 2912, 3330
Ama87I CYCGRG 1 cut(s) 2926
Aor13HI TCCGGA 1 cut(s) 1569
Aor51HI AGCGCT 1 cut(s) 1285
AoxI GGCC 5 cut(s) 159, 1018, 1125, 1275, 1547
ApoI RAATTY 5 cut(s) 957, 1139, 1257, 2762, 3373
AseI ATTAAT 4 cut(s) 603, 975, 1487, 1925
AsiGI ACCGGT 1 cut(s) 1676
Asp718I GGTACC 1 cut(s) 2948
AspLEI GCGC 3 cut(s) 1286, 2537, 3346
AspS9I GGNCC 2 cut(s) 2432, 3307
AsuC2I CCSGG 2 cut(s) 412, 1204
AsuHPI GGTGA 8 cut(s) 10, 149, 241, 256, 965, 1193, 1358, 3173
AvaI CYCGRG 1 cut(s) 2926
AvaII GGWCC 2 cut(s) 2432, 3307
AxyI CCTNAGG 1 cut(s) 1158
BaeGI GKGCMC 2 cut(s) 1666, 3268
BaeI ACNNNNGTAYC 4 cut(s) 1161, 1194, 3141, 3174
BalI TGGCCA 1 cut(s) 1127
BanI GGYRCC 3 cut(s) 1661, 2948, 3229
BanII GRGCYC 2 cut(s) 298, 2666
BarI GAAGNNNNNNTAC 2 cut(s) 2030, 2062
BbsI GAAGAC 1 cut(s) 2852
Bbv12I GWGCWC 4 cut(s) 298, 1379, 2082, 2666
BccI CCATC 5 cut(s) 234, 962, 1079, 1463, 3056
BcgI CGANNNNNNTGC 2 cut(s) 2010, 2044
BciT130I CCWGG 5 cut(s) 1031, 1760, 2816, 3008, 3311
BciVI GTATCC 2 cut(s) 1691, 2796
BclI TGATCA 2 cut(s) 15, 3432
BcnI CCSGG 2 cut(s) 412, 1204
BcoDI GTCTC 7 cut(s) 22, 67, 701, 1750, 2625, 3071, 3419
BfaI CTAG 6 cut(s) 861, 1166, 1454, 2258, 2715, 3248
BfmI CTRYAG 7 cut(s) 529, 687, 1113, 1806, 2736, 2903, 3330
BfoI RGCGCY 1 cut(s) 1287
BfrI CTTAAG 1 cut(s) 1244
BfuAI ACCTGC 2 cut(s) 203, 1705
BfuI GTATCC 2 cut(s) 1691, 2796
BlpI GCTNAGC 1 cut(s) 1119
Bme1390I CCNGG 7 cut(s) 412, 1031, 1204, 1760, 2816, 3008, 3311
Bme18I GGWCC 2 cut(s) 2432, 3307
BmeT110I CYCGRG 1 cut(s) 2926
BmgT120I GGNCC 2 cut(s) 2432, 3307
BmiI GGNNCC 5 cut(s) 1035, 1663, 2950, 3012, 3231
BmrFI CCNGG 7 cut(s) 412, 1031, 1204, 1760, 2816, 3008, 3311
BpiI GAAGAC 1 cut(s) 2852
BplI GAGNNNNNCTC 2 cut(s) 2136, 2168
BpmI CTGGAG 2 cut(s) 132, 312
Bpu1102I GCTNAGC 1 cut(s) 1119
BpuEI CTTGAG 3 cut(s) 1393, 1546, 2068
BpuMI CCSGG 2 cut(s) 412, 1204
BsaBI GATNNNNATC 1 cut(s) 3437
BsaJI CCNNGG 4 cut(s) 162, 331, 411, 1203
BsaWI WCCGGW 4 cut(s) 20, 1569, 1676, 2694
BsaXI ACNNNNNCTCC 6 cut(s) 105, 135, 428, 458, 582, 612
Bsc4I CCNNNNNNNGG 5 cut(s) 950, 1844, 2258, 2927, 3316
Bse118I RCCGGY 1 cut(s) 1676
Bse1I ACTGG 6 cut(s) 115, 190, 631, 1037, 3261, 3309
Bse21I CCTNAGG 1 cut(s) 1158
Bse3DI GCAATG 5 cut(s) 1398, 1824, 2897, 3045, 3402
Bse8I GATNNNNATC 1 cut(s) 3437
BseAI TCCGGA 1 cut(s) 1569
BseBI CCWGG 5 cut(s) 1031, 1760, 2816, 3008, 3311
BseDI CCNNGG 4 cut(s) 162, 331, 411, 1203
BseGI GGATG 8 cut(s) 18, 245, 326, 799, 1276, 1735, 1963, 3067
BseJI GATNNNNATC 1 cut(s) 3437
BseLI CCNNNNNNNGG 5 cut(s) 950, 1844, 2258, 2927, 3316
BseMI GCAATG 5 cut(s) 1398, 1824, 2897, 3045, 3402
BseMII CTCAG 9 cut(s) 779, 1089, 1110, 1172, 1208, 1440, 1912, 2167, 3399
BseNI ACTGG 6 cut(s) 115, 190, 631, 1037, 3261, 3309
BseSI GKGCMC 2 cut(s) 1666, 3268
BsgI GTGCAG 1 cut(s) 21
Bsh1236I CGCG 1 cut(s) 333
Bsh1285I CGRYCG 1 cut(s) 2024
BshFI GGCC 5 cut(s) 161, 1020, 1127, 1277, 1549
BshNI GGYRCC 3 cut(s) 1661, 2948, 3229
BshTI ACCGGT 1 cut(s) 1676
BsiEI CGRYCG 1 cut(s) 2024
BsiHKAI GWGCWC 4 cut(s) 298, 1379, 2082, 2666
BsiHKCI CYCGRG 1 cut(s) 2926
BsiSI CCGG 6 cut(s) 21, 411, 1203, 1570, 1677, 2695
BslFI GGGAC 2 cut(s) 1176, 2743
BslI CCNNNNNNNGG 5 cut(s) 950, 1844, 2258, 2927, 3316
BsmAI GTCTC 7 cut(s) 22, 67, 701, 1750, 2625, 3071, 3419
BsmFI GGGAC 2 cut(s) 1176, 2743
BsmI GAATGC 2 cut(s) 1393, 2122
BsnI GGCC 5 cut(s) 161, 1020, 1127, 1277, 1549
BsoBI CYCGRG 1 cut(s) 2926
Bsp1286I GDGCHC 6 cut(s) 298, 1379, 1666, 2082, 2666, 3268
Bsp13I TCCGGA 1 cut(s) 1569
Bsp1720I GCTNAGC 1 cut(s) 1119
Bsp19I CCATGG 1 cut(s) 162
BspACI CCGC 5 cut(s) 331, 333, 558, 1369, 1756
BspANI GGCC 5 cut(s) 161, 1020, 1127, 1277, 1549
BspCNI CTCAG 9 cut(s) 780, 1090, 1111, 1171, 1207, 1441, 1911, 2166, 3400
BspEI TCCGGA 1 cut(s) 1569
BspFNI CGCG 1 cut(s) 333
BspLI GGNNCC 5 cut(s) 1035, 1663, 2950, 3012, 3231
BspMAI CTGCAG 4 cut(s) 533, 691, 1117, 2907
BspMI ACCTGC 2 cut(s) 203, 1705
BspPI GGATC 6 cut(s) 1010, 1457, 1584, 1877, 2912, 3330
BspT107I GGYRCC 3 cut(s) 1661, 2948, 3229
BspTI CTTAAG 1 cut(s) 1244
BsrDI GCAATG 5 cut(s) 1398, 1824, 2897, 3045, 3402
BsrFI RCCGGY 1 cut(s) 1676
BsrI ACTGG 6 cut(s) 115, 190, 631, 1037, 3261, 3309
BssAI RCCGGY 1 cut(s) 1676
BssECI CCNNGG 4 cut(s) 162, 331, 411, 1203
BssNAI GTATAC 1 cut(s) 2512
BssT1I CCWWGG 1 cut(s) 162
Bst1107I GTATAC 1 cut(s) 2512
Bst2UI CCWGG 5 cut(s) 1031, 1760, 2816, 3008, 3311
BstAFI CTTAAG 1 cut(s) 1244
BstAPI GCANNNNNTGC 3 cut(s) 875, 2099, 3476
BstC8I GCNNGC 8 cut(s) 648, 1125, 1996, 2191, 2335, 2518, 2533, 2554
BstDSI CCRYGG 2 cut(s) 162, 331
BstENI CCTNNNNNAGG 1 cut(s) 2256
BstF5I GGATG 8 cut(s) 18, 245, 326, 799, 1276, 1735, 1963, 3067
BstFNI CGCG 1 cut(s) 333
BstH2I RGCGCY 1 cut(s) 1287
BstHHI GCGC 3 cut(s) 1286, 2537, 3346
BstMAI GTCTC 7 cut(s) 22, 67, 701, 1750, 2625, 3071, 3419
BstMCI CGRYCG 1 cut(s) 2024
BstNI CCWGG 5 cut(s) 1031, 1760, 2816, 3008, 3311
BstNSI RCATGY 2 cut(s) 2520, 3479
BstSCI CCNGG 7 cut(s) 410, 1029, 1202, 1758, 2814, 3006, 3309
BstSFI CTRYAG 7 cut(s) 529, 687, 1113, 1806, 2736, 2903, 3330
BstSLI GKGCMC 2 cut(s) 1666, 3268
BstUI CGCG 1 cut(s) 333
BstV2I GAAGAC 1 cut(s) 2852
BstX2I RGATCY 2 cut(s) 1462, 1589
BstYI RGATCY 2 cut(s) 1462, 1589
BstZ17I GTATAC 1 cut(s) 2512
Bsu36I CCTNAGG 1 cut(s) 1158
BsuI GTATCC 2 cut(s) 1691, 2796
BsuRI GGCC 5 cut(s) 161, 1020, 1127, 1277, 1549
BtgI CCRYGG 2 cut(s) 162, 331
BtgZI GCGATG 1 cut(s) 609
BtsCI GGATG 8 cut(s) 18, 245, 326, 799, 1276, 1735, 1963, 3067
BtsI GCAGTG 1 cut(s) 1410
BtsIMutI CAGTG 8 cut(s) 108, 1386, 1410, 2615, 2895, 3268, 3302, 3339
BveI ACCTGC 2 cut(s) 203, 1705
Cac8I GCNNGC 8 cut(s) 648, 1125, 1996, 2191, 2335, 2518, 2533, 2554
CfoI GCGC 3 cut(s) 1286, 2537, 3346
Cfr10I RCCGGY 1 cut(s) 1676
Cfr13I GGNCC 2 cut(s) 2432, 3307
Cfr42I CCGCGG 1 cut(s) 334
CseI GACGC 1 cut(s) 1301
CsiI ACCWGGT 1 cut(s) 3309
CspAI ACCGGT 1 cut(s) 1676
EaeI YGGCCR 1 cut(s) 1125
Ecl136II GAGCTC 2 cut(s) 296, 2664
Eco130I CCWWGG 1 cut(s) 162
Eco147I AGGCCT 1 cut(s) 1020
Eco24I GRGCYC 2 cut(s) 298, 2666
Eco47I GGWCC 2 cut(s) 2432, 3307
Eco47III AGCGCT 1 cut(s) 1285
Eco53kI GAGCTC 2 cut(s) 296, 2664
Eco57I CTGAAG 2 cut(s) 2412, 2993
Eco81I CCTNAGG 1 cut(s) 1158
Eco88I CYCGRG 1 cut(s) 2926
EcoICRI GAGCTC 2 cut(s) 296, 2664
EcoNI CCTNNNNNAGG 1 cut(s) 2256
EcoO109I RGGNCCY 1 cut(s) 2432
EcoRII CCWGG 5 cut(s) 1029, 1758, 2814, 3006, 3309
EcoT14I CCWWGG 1 cut(s) 162
EcoT22I ATGCAT 1 cut(s) 541
EcoT38I GRGCYC 2 cut(s) 298, 2666
ErhI CCWWGG 1 cut(s) 162
FalI AAGNNNNNCTT 4 cut(s) 1734, 1766, 1862, 1894
FaqI GGGAC 2 cut(s) 1176, 2743
FauI CCCGC 1 cut(s) 338
FauNDI CATATG 1 cut(s) 3052
FbaI TGATCA 2 cut(s) 15, 3432
FblI GTMKAC 2 cut(s) 1630, 2511
FokI GGATG 8 cut(s) 25, 252, 313, 806, 1283, 1722, 1950, 3074
FriOI GRGCYC 2 cut(s) 298, 2666
FspBI CTAG 6 cut(s) 861, 1166, 1454, 2258, 2715, 3248
FspI TGCGCA 1 cut(s) 3345
GlaI GCGC 3 cut(s) 1285, 2536, 3345
GsuI CTGGAG 2 cut(s) 132, 312
HaeII RGCGCY 1 cut(s) 1287
HaeIII GGCC 5 cut(s) 161, 1020, 1127, 1277, 1549
HapII CCGG 6 cut(s) 21, 411, 1203, 1570, 1677, 2695
HgaI GACGC 1 cut(s) 1301
HhaI GCGC 3 cut(s) 1286, 2537, 3346
Hin6I GCGC 3 cut(s) 1284, 2535, 3344
HinP1I GCGC 3 cut(s) 1284, 2535, 3344
HincII GTYRAC 2 cut(s) 1342, 1631
HindII GTYRAC 2 cut(s) 1342, 1631
HindIII AAGCTT 1 cut(s) 456
HinfI GANTC 5 cut(s) 1298, 1907, 2924, 3278, 3399
HpaI GTTAAC 1 cut(s) 1342
HpaII CCGG 6 cut(s) 21, 411, 1203, 1570, 1677, 2695
HphI GGTGA 8 cut(s) 10, 149, 241, 256, 965, 1193, 1358, 3173
Hpy166II GTNNAC 7 cut(s) 1342, 1631, 2047, 2512, 3134, 3164, 3188
Hpy188I TCNGA 9 cut(s) 392, 1007, 1303, 1519, 1602, 1612, 1729, 1901, 3283
Hpy8I GTNNAC 7 cut(s) 1342, 1631, 2047, 2512, 3134, 3164, 3188
Hpy99I CGWCG 2 cut(s) 1635, 2566
HpyAV CCTTC 5 cut(s) 2032, 2423, 2743, 3220, 3437
HpyCH4IV ACGT 3 cut(s) 1633, 2564, 3485
HpySE526I ACGT 3 cut(s) 1633, 2564, 3485
HspAI GCGC 3 cut(s) 1284, 2535, 3344
Kpn2I TCCGGA 1 cut(s) 1569
KpnI GGTACC 1 cut(s) 2952
Ksp22I TGATCA 2 cut(s) 15, 3432
KspAI GTTAAC 1 cut(s) 1342
KspI CCGCGG 1 cut(s) 334
LmnI GCTCC 3 cut(s) 293, 2549, 3010
MabI ACCWGGT 1 cut(s) 3309
MaeI CTAG 6 cut(s) 861, 1166, 1454, 2258, 2715, 3248
MaeII ACGT 3 cut(s) 1633, 2564, 3485
MaeIII GTNAC 4 cut(s) 1637, 1672, 1720, 2930
MboII GAAGA 7 cut(s) 430, 1572, 1921, 2339, 2405, 2803, 2857
MfeI CAATTG 4 cut(s) 378, 2094, 2184, 2373
MflI RGATCY 2 cut(s) 1462, 1589
MhlI GDGCHC 6 cut(s) 298, 1379, 1666, 2082, 2666, 3268
MlsI TGGCCA 1 cut(s) 1127
MluNI TGGCCA 1 cut(s) 1127
MlyI GAGTC 3 cut(s) 1901, 2918, 3408
MmeI TCCRAC 4 cut(s) 865, 1015, 2122, 2527
Mox20I TGGCCA 1 cut(s) 1127
Mph1103I ATGCAT 1 cut(s) 541
MroI TCCGGA 1 cut(s) 1569
MscI TGGCCA 1 cut(s) 1127
MslI CAYNNNNRTG 3 cut(s) 655, 1403, 2085
Msp20I TGGCCA 1 cut(s) 1127
MspA1I CMGCKG 4 cut(s) 333, 1118, 1718, 2971
MspCI CTTAAG 1 cut(s) 1244
MspI CCGG 6 cut(s) 21, 411, 1203, 1570, 1677, 2695
MspR9I CCNGG 7 cut(s) 412, 1031, 1204, 1760, 2816, 3008, 3311
MunI CAATTG 4 cut(s) 378, 2094, 2184, 2373
Mva1269I GAATGC 2 cut(s) 1393, 2122
MvaI CCWGG 5 cut(s) 1031, 1760, 2816, 3008, 3311
MvnI CGCG 1 cut(s) 333
NciI CCSGG 2 cut(s) 412, 1204
NcoI CCATGG 1 cut(s) 162
NdeI CATATG 1 cut(s) 3052
NlaIV GGNNCC 5 cut(s) 1035, 1663, 2950, 3012, 3231
NmeAIII GCCGAG 1 cut(s) 2101
NmuCI GTSAC 2 cut(s) 1637, 1672
NsbI TGCGCA 1 cut(s) 3345
NsiI ATGCAT 1 cut(s) 541
NspI RCATGY 2 cut(s) 2520, 3479
OliI CACNNNNGTG 1 cut(s) 2085
PaeI GCATGC 1 cut(s) 2520
PaqCI CACCTGC 1 cut(s) 1705
PceI AGGCCT 1 cut(s) 1020
PcsI WCGNNNNNNNCGW 1 cut(s) 1299
PctI GAATGC 2 cut(s) 1393, 2122
PfeI GAWTC 2 cut(s) 1298, 3278
PflFI GACNNNGTC 1 cut(s) 1635
PflMI CCANNNNNTGG 1 cut(s) 3316
PfoI TCCNGGA 1 cut(s) 2814
PinAI ACCGGT 1 cut(s) 1676
Ple19I CGATCG 1 cut(s) 2024
PleI GAGTC 3 cut(s) 1901, 2918, 3407
PpsI GAGTC 3 cut(s) 1901, 2918, 3407
PpuMI RGGWCCY 1 cut(s) 2432
PshBI ATTAAT 4 cut(s) 603, 975, 1487, 1925
PsiI TTATAA 1 cut(s) 696
Psp124BI GAGCTC 2 cut(s) 298, 2666
Psp5II RGGWCCY 1 cut(s) 2432
Psp6I CCWGG 5 cut(s) 1029, 1758, 2814, 3006, 3309
PspGI CCWGG 5 cut(s) 1029, 1758, 2814, 3006, 3309
PspN4I GGNNCC 5 cut(s) 1035, 1663, 2950, 3012, 3231
PspPI GGNCC 2 cut(s) 2432, 3307
PspPPI RGGWCCY 1 cut(s) 2432
PstI CTGCAG 4 cut(s) 533, 691, 1117, 2907
PsuI RGATCY 2 cut(s) 1462, 1589
PsyI GACNNNGTC 1 cut(s) 1635
PvuI CGATCG 1 cut(s) 2024
PvuII CAGCTG 3 cut(s) 1118, 1718, 2971
RseI CAYNNNNRTG 3 cut(s) 655, 1403, 2085
SacI GAGCTC 2 cut(s) 298, 2666
SacII CCGCGG 1 cut(s) 334
SalI GTCGAC 1 cut(s) 1629
Sau96I GGNCC 2 cut(s) 2432, 3307
SchI GAGTC 3 cut(s) 1901, 2918, 3408
ScrFI CCNGG 7 cut(s) 412, 1031, 1204, 1760, 2816, 3008, 3311
SduI GDGCHC 6 cut(s) 298, 1379, 1666, 2082, 2666, 3268
SexAI ACCWGGT 1 cut(s) 3309
SfcI CTRYAG 7 cut(s) 529, 687, 1113, 1806, 2736, 2903, 3330
Sfr303I CCGCGG 1 cut(s) 334
SgrBI CCGCGG 1 cut(s) 334
SinI GGWCC 2 cut(s) 2432, 3307
SmiMI CAYNNNNRTG 3 cut(s) 655, 1403, 2085
SmlI CTYRAG 4 cut(s) 1244, 1372, 1561, 2083
SmoI CTYRAG 4 cut(s) 1244, 1372, 1561, 2083
SphI GCATGC 1 cut(s) 2520
SseBI AGGCCT 1 cut(s) 1020
SsiI CCGC 5 cut(s) 331, 333, 558, 1369, 1756
SspI AATATT 3 cut(s) 69, 834, 1069
SspMI CTAG 6 cut(s) 861, 1166, 1454, 2258, 2715, 3248
SstI GAGCTC 2 cut(s) 298, 2666
StuI AGGCCT 1 cut(s) 1020
StyD4I CCNGG 7 cut(s) 410, 1029, 1202, 1758, 2814, 3006, 3309
StyI CCWWGG 1 cut(s) 162
TaiI ACGT 3 cut(s) 1636, 2567, 3488
TaqI TCGA 6 cut(s) 93, 705, 1630, 1910, 2885, 3441
TatI WGTACW 2 cut(s) 435, 518
TauI GCSGC 2 cut(s) 561, 1758
TfiI GAWTC 2 cut(s) 1298, 3278
TscAI CASTG 8 cut(s) 115, 1386, 1410, 2622, 2895, 3268, 3309, 3339
TseFI GTSAC 2 cut(s) 1637, 1672
Tsp45I GTSAC 2 cut(s) 1637, 1672
TspDTI ATGAA 7 cut(s) 1132, 1701, 2085, 2183, 3112, 3239, 3267
TspRI CASTG 8 cut(s) 115, 1386, 1410, 2622, 2895, 3268, 3309, 3339
Tth111I GACNNNGTC 1 cut(s) 1635
Van91I CCANNNNNTGG 1 cut(s) 3316
Vha464I CTTAAG 1 cut(s) 1244
VpaK11BI GGWCC 2 cut(s) 2432, 3307
VspI ATTAAT 4 cut(s) 603, 975, 1487, 1925
XagI CCTNNNNNAGG 1 cut(s) 2256
XapI RAATTY 5 cut(s) 957, 1139, 1257, 2762, 3373
XbaI TCTAGA 1 cut(s) 3247
XceI RCATGY 2 cut(s) 2520, 3479
XcmI CCANNNNNNNNNTGG 1 cut(s) 1285
XmiI GTMKAC 2 cut(s) 1630, 2511
XspI CTAG 6 cut(s) 861, 1166, 1454, 2258, 2715, 3248
Zsp2I ATGCAT 1 cut(s) 541
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.