RLG00000007255

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
14986668 .. 14992943
6276 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007255

Sequence Viewer

Length: 3870 bp
ATGGCTGATCAGGAAAACCATATGGATGGAGATCATGGTGTAAATGCAGAGCCAGGCACGGCATCAGCAGTGGCCGCAGATTCGAAGAATAATAACCTAGAGGATACAGGCAAGAGCAAGGAGGATGCAACCGGTTCAGTACCATATTACAAGCTCTTCTCCTTTGCTGATTCTATGGATTACCTGTTAATGTCTGTTGGTACGATCAGTGCTATTGGAAACGGATTATGTATGCCTCTAATGACTGTGATCATGGGAGAAGTGATTAACTCTTTCGGAGAAACTCCGAATACCAAAAAAGTGGTTGGCATAGTCTCCAAGGTTGCTCTAAAATATGTTTACTTGGCTTTGGGGGCTGCAGCAGCTGCATTTTTACAGATGTCTTGCTGGGTGATCACCGGAGAGAGACAGGCGGCACGAATAAGAAGTTTATACTTGAAGACAATCCTAAGGCAAGATGTTGGTTTTTTTGATAAAGAAGTTACCACCGGGGAAATAGTTGGAAGGATGTCAGGTGATACTGTGCTCATTCAAGAGGCCATGGGCGAGAAAGTAGGAAGTATTATCCAGTTAGTTGCAACATTCATAGGAGGCTTTGTCATAGCATTTGCTAAGGGATGGCGTCTCACCCTTGTCATGCTGACCTCTATTCCCCCTCTTGTTTTCTCCGGTGCTGTATTGAGCTTCACTGTAAAGAGGATGACAACCCGCGGGCAAGCTGCTTATTCAGTGGGAGCAGCTGTGGTAGAGCAGACAATCGGTTCAATTAGAACTGTTGCATCATTTACAGGTGAGAAGCAAGCTGTAACAAAGTACAACAACTCATTAGACAAAGCTTACAAGTCTGGAGTGCAAGAGGGTTTGGCATCAGGGTTTGGTCTCGGTGCGATTGTGCTTATTGTATTCTGCAGCTATGCTTTGGCTGTATGGTATGGCGGAAAAATGATACTTGAACAAGGATATAAAGCAGGAGATGTCATGAATGTGATATTTGCAGTATTAACTGGCTCCTTCTCTCTCGGGCAAGCATCTCCATGCATAAGTGCACTTTCTGCTGGACAAGCTGCAGCTTATAAGATGTTTGAGACAATTAACAGAAAGCCGGAGATAGATGCTTCTGATACTAAAGGGAAGCAATTAGAAGACATCCGAGGAGAAATAAAATTTAGGGATGTTTCTTTTAGTTATCCTGCAAGACCAGATGAACAAATATTCCAAGGATTCTCACTCTCAATATCTAGTGGTGCAACTGCTGCTCTGGTAGGACAGAGCGGAAGTGGTAAATCAACTATAATCAGTTTGATTGAGAGATTTTATGACCCACAGGCAGGTGAAGTTCTTATCGATGGCAATAATCTCAAAGAGTTCCAGCTGAAATGGATCAGACAGAAAATAGGGCTTGTCAGCCAGGAACCTGTTTTGTTTACTTGCAGCATTAAAGATAATATTACCTATGGGAAGGATGGAGCAACTTTTGAAGAAATAAAGGCTGCCGCTGAGCTTGCCAATGCTGCTAAATTCATAGACAAATTACCTCAGGGACTAGATACAATGGTTGGGGAGCATGGAACTCAGCTATCTGGGGGCCAAAAGCAGAGAGTTGCCATAGCTAGAGCAATCCTTAAGAACCCGAGAATTCTGCTTTTAGATGAAGCTACAAGTGCTCTTGATGCAGAATCTGAGAGGGTTGTGCAAGAGGCATTGGACAGAGTTATGGTCAGCCGGACTACTGTGATTGTAGCCCACCGCTTGAGCGCAGTGAGGAATGCTGATACGATTGCAGTTATAAATCGCGGAAAAATTGTTGAACAAGGACCACATTCTGAACTAGTTAAGGTTCCTGATGGAGCATATAGCCAGCTTATAAGGTTGCAACAAATTAGCAGTGTGTCAGAACAGAACTCTCAAAACGTTCCGGAAATTAGGGCATTGTCAAACTCTAGAAGAGATAGAAGTCCAAGACTTTCTCCCTTACAATCCATAAGTCGGGGATCATCTGGAAATACTAGTCCCCACTCATTCTCAATCTCACATGGTGCGCCTACTGTAATAGGTGTGCTTGAAATAGCGCCAACTGAACCTCACATTCTAGCTGCATCATCAGAACTGCATCCAGAAGTCTCACTTAGCCGTCTAGCTTACCTGAACAAGCCAGAAATCCCAGTGCTGATTCTAGGTACTATAGCTGCAGCAATTAATGGGGTAATATTGCCTATTTTCGGGGTGTTAATATCCAGTATAATCAAGACCTTCTTTGAGCCACCTCATCAACTTCGAAAGGATTCCAAGTTTTGGTCATTAATCTTTATTCTTCTTGGAGTGGCATCTCTCTTGGCATATCCATTGAAAGCATACTTTTTTGCTGTGGCTGGGGGCAAGTTAATAAGACGAGTTCGATCACTATGCTTTGAGAAGGTGATTCACATGGAAGTAAGTTGGTTCGATGAAGCTGAGCACTCAAGTGGTGCAATTGGTGCAAGGCTTTCTGCAGATGCAGCCTCTCTCCGAGGGCTGGTTGGAGATGCTCTAGGTTTGGCTGTTTTGAATGGATCAACTGCAATTGCCGGATTGGTTATTGCTTTTGTGGCAAATTGGCAACTTGCTCTTATAATCCTTATTCTCCTACCTCTACTAGGAATAAGTGGATATTTCCAGGTCCAGTTCCTAAAAGGATTAAGTGGTAGTGCAAAGAAAATGTATGAAGACGCAAGCCAAGTAGCCATAGATGCTGTGGGGAATATTAGAACAATTGCTTCATTTTGTGCTGAAGAAAAGGTTATCAAGTTGTACCACACAAAATGTGAAGGTCCTATCAAGGCAGGGATAAGACAAGGGATAGTCAGTGGGATAGGCTTTGGACTATCGTTCTTCTTGCTCTTCTCTGTATATGCATGTAGTTTCTATGCTGGTGCTCAACTTGTAGGAGCAGGCAAGACAACATTCCCTGACGTTTTTCGGGTTTTCTTTGCTCTAACTATGACAGCTATAGCATTGTCCCACCAGGGTTCCGTTGGCCCTGATTCAATTAAAGGAAAGAGCGCTGCCGCTTCTATATTTGCACTTCTTGACCAAAAATCAAAAATAGATTCTAGTGATGACTCTGGAACAACCATTGTGAATGTGAAAGGAGAAATCCAATTTCGTCATGTTAGTTTCAAGTATCCTAATAGACCTAATGTGCCAATCTTCCGGGATCTTTGCCTGACCATTCACCATGGCAAGACACTTGCTCTGGTGGGAGAAAGTGGAAGTGGAAAATCGACAGTGATCTCATTGCTCCAGAGATTTTATGACCCTGATTCAGGTCATATTACATTAGATAGTGTTGAAATGAAAACTTTACAGTTGAAGTGGTTGAGACAGCAAATGGGGTTTGTGAGCCAGGAGCCTCTATTGTTTAATGACACTATAAGAGCCAACATTGCATATGGAAAGGAAGGGATTGCAACCGAGGCTGAAATTATAGCTGCAGCAGAATTGGCAAATGCCCACAAGTTCATTAGTAGTTTACAACAGGGTTATGATACAATAGCGGGCGAGCGAGGGGTTCAACTGTCTGGTGGACAGAAGCAAAGGGTGGCTATTGCAAGAGCGATAATGAAGGCACCAAAGATATTACTACTAGATGAAGCCACTAGTGCTCTTGATGCTGAATCCGAACGAGTGGTTCAAGATGCACTAGATCGAGTTATGGTGGATAGAACCACAGTCGTGGTTGCACATCGTTTATCCACGATTAAGGGTGCAGATTTAATAGCAGTGGTGAAAAATGGAGTTATTGCAGAGAAAGGAAAGCATGAATTTTTGATCAATATCAAGGGTGGCACTTATGCTTCTTTGGCAGCATTACATGCAAGTGCCTCATCTTAG

Protein Analysis

1290

Amino Acids

138.08

Weight (kDa)

8.62

Isoelectric Point (pI)

31.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 66 - 338 2.4e-60 ABC transporter transmembrane region
ABC_tran PF00005 406 - 554 4.9e-34 ABC transporter
ABC_membrane PF00664 723 - 995 6e-61 ABC transporter transmembrane region
ABC_tran PF00005 1064 - 1213 1.4e-33 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000116)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02520 AT1G02520 AT1G02520 AT1G02530 AT1G02530 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT2G47000 AT3G62150 AT3G62150 AT3G62150 AT4G01820 AT4G01820 AT4G01830 AT4G01830
fragaria_vesca FvH4_1g26280 FvH4_4g21370 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21380 FvH4_4g21381 FvH4_4g21600 FvH4_4g21600 FvH4_4g21600 FvH4_4g21620 FvH4_4g21621 FvH4_4g21622 FvH4_6g00641 FvH4_6g00650
malus_domestica MD09G1290100.v1.1 MD13G1138600.v1.1 MD13G1138700.v1.1 MD13G1139100.v1.1 MD16G1134500.v1.1 MD16G1134700.v1.1 MD16G1135000.v1.1 MD16G1135100.v1.1 MD17G1284300.v1.1 MD17G1284700.v1.1
prunus_persica Prupe.1G103800_v2.0.a1 Prupe.1G103800_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G103900_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104100_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104300_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.1G104400_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.2G166500_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G003100_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123700_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1 Prupe.3G123800_v2.0.a1
pyrus_communis pycom04g08750 pycom09g19770 pycom09g19790 pycom13g09140 pycom16g11900 pycom16g11920 pycom16g11930 pycom17g28030
rosa_chinensis RchiOBHm_Chr2g0157341 RchiOBHm_Chr3g0448061 RchiOBHm_Chr3g0485931 RchiOBHm_Chr3g0485961 RchiOBHm_Chr4g0427151 RchiOBHm_Chr4g0427161 RchiOBHm_Chr4g0427211 RchiOBHm_Chr4g0427241 RchiOBHm_Chr4g0427271 RchiOBHm_Chr4g0427711 RchiOBHm_Chr4g0427721 RchiOBHm_Chr4g0427771 RchiOBHm_Chr4g0427781 RchiOBHm_Chr4g0427791 RchiOBHm_Chr4g0427851 RchiOBHm_Chr4g0427861 RchiOBHm_Chr4g0446561 RchiOBHm_Chr5g0081601 RchiOBHm_Chr6g0278251 RchiOBHm_Chr6g0303241
rosa_laevigata RLG00000007206 RLG00000007207 RLG00000007209 RLG00000007210 RLG00000007211 RLG00000007212 RLG00000007214 RLG00000007255 RLG00000007256 RLG00000007257 RLG00000011097 RLG00000019257 RLG00000023121 RLG00000025948 RLG00000027246 RLG00000029989
rosa_multiflora Rmu_co8076196.1_g000001 Rmu_co8517461.1_g000001 Rmu_sc0000066.1_g000018 Rmu_sc0000066.1_g000024 Rmu_sc0000066.1_g000033 Rmu_sc0000066.1_g000047 Rmu_sc0000066.1_g000048 Rmu_sc0001651.1_g000024 Rmu_sc0002816.1_g000003 Rmu_sc0003337.1_g000015 Rmu_sc0003444.1_g000015 Rmu_sc0003813.1_g000004 Rmu_sc0004876.1_g000001 Rmu_sc0005969.1_g000025 Rmu_sc0008650.1_g000006 Rmu_sc0008855.1_g000001 Rmu_sc0009165.1_g000001 Rmu_sc0009165.1_g000002 Rmu_sc0010010.1_g000001 Rmu_sc0010010.1_g000005 Rmu_sc0036078.1_g000001
rosa_roxburghii Rroxscaffold_2G00130200 Rroxscaffold_5G00367590 Rroxscaffold_5G00368970 Rroxscaffold_5G00368990 Rroxscaffold_5G00369340 Rroxscaffold_5G00369350 Rroxscaffold_5G00369380 Rroxscaffold_5G00369390 Rroxscaffold_5G00369440 Rroxscaffold_5G00369450 Rroxscaffold_5G00369500 Rroxscaffold_5G00369510 Rroxscaffold_6G00396190 Rroxscaffold_6G00426220 Rroxscaffold_6G00427790 Rroxscaffold_7G00164940
rosa_rugosa Rorug01G0160800.1 Rorug02G0341400 Rorug02G0461800 Rorug02G0608000 Rorug03G0222700 Rorug03G0222800 Rorug03G0222900 Rorug04G0216400 Rorug04G0216400 Rorug04G0220100 Rorug04G0220100 Rorug04G0220100 Rorug05G0181800 Rorug05G0409700
rosa_samantha Rh1BG177300 Rh1DG206800 Rh2AG590600 Rh2BG473400 Rh2DG482300 Rh3AG007500 Rh3AG272400 Rh3BG007200 Rh3BG307000 Rh3DG301600 Rh3DG301900 Rh4AG272300 Rh4AG272400 Rh4AG272700 Rh4AG275900 Rh4AG276100 Rh4AG276200 Rh4AG276500 Rh4AG276600 Rh4AG276700 Rh4AG277000 Rh4BG281900 Rh4BG282200 Rh4CG292900 Rh4CG293300 Rh4CG293400 Rh4CG293600 Rh4CG297400 Rh4CG297500 Rh4CG297900 Rh4CG298000 Rh4CG298300 Rh4CG298400 Rh4DG165900 Rh5BG011400 Rh5DG092900 Rh6AG434000 Rh6CG153300 Rh6CG391700 Rh7BG333600
rosa_wichuraiana Rw0G005570 Rw0G005590 Rw0G011850 Rw0G015530 Rw0G017350 Rw0G019580 Rw3G000600 Rw3G024160 Rw4G023620 Rw4G023640 Rw4G023660 Rw4G023670 Rw4G023950 Rw4G023960 Rw4G024050 Rw4G024060 Rw5G048020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 1074, 1787, 1865, 2609
AarI CACCTGC 1 cut(s) 1319
Acc36I ACCTGC 1 cut(s) 1319
AccB1I GGYRCC 1 cut(s) 3604
AccB7I CCANNNNNTGG 1 cut(s) 2292
AccBSI CCGCTC 1 cut(s) 1272
AccII CGCG 2 cut(s) 711, 1794
AccIII TCCGGA 1 cut(s) 1915
AclI AACGTT 1 cut(s) 1911
AclWI GGATC 4 cut(s) 1388, 1999, 2557, 3201
AcoI YGGCCR 1 cut(s) 72
AcsI RAATTY 4 cut(s) 1163, 1517, 1635, 3800
AcuI CTGAAG 1 cut(s) 2787
AcyI GRCGYC 1 cut(s) 622
AdeI CACNNNGTG 1 cut(s) 2036
AfaI GTAC 5 cut(s) 141, 202, 815, 2179, 2789
AfeI AGCGCT 1 cut(s) 3040
AfiI CCNNNNNNNGG 7 cut(s) 1328, 1986, 2219, 2292, 2512, 2633, 3302
AflII CTTAAG 1 cut(s) 1622
AgeI ACCGGT 1 cut(s) 131
AhlI ACTAGT 3 cut(s) 1828, 2006, 3635
AjnI CCWGG 5 cut(s) 52, 1407, 2652, 3000, 3381
AleI CACNNNNGTG 2 cut(s) 2460, 3710
AloI GAACNNNNNNTCC 2 cut(s) 1197, 1229
Alw21I GWGCWC 6 cut(s) 528, 1048, 1666, 2457, 2914, 3643
Alw26I GTCTC 7 cut(s) 319, 400, 629, 884, 1079, 2125, 3352
Alw44I GTGCAC 1 cut(s) 1044
AlwI GGATC 4 cut(s) 1388, 1999, 2557, 3201
AlwNI CAGNNNCTG 2 cut(s) 365, 1679
Ama87I CYCGRG 2 cut(s) 1019, 1630
Aor13HI TCCGGA 1 cut(s) 1915
Aor51HI AGCGCT 1 cut(s) 3040
AoxI GGCC 4 cut(s) 72, 537, 1585, 3013
ApaLI GTGCAC 1 cut(s) 1044
ApoI RAATTY 4 cut(s) 1163, 1517, 1635, 3800
AseI ATTAAT 2 cut(s) 2196, 2300
AsiGI ACCGGT 1 cut(s) 131
Asp700I GAANNNNTTC 1 cut(s) 2281
AspLEI GCGC 4 cut(s) 1757, 2041, 2071, 3041
AspS9I GGNCC 5 cut(s) 1585, 1814, 2656, 2807, 3014
AsuC2I CCSGG 2 cut(s) 490, 3191
AsuHPI GGTGA 9 cut(s) 388, 403, 527, 619, 803, 1343, 2428, 3203, 3775
AsuII TTCGAA 2 cut(s) 83, 2275
AvaI CYCGRG 2 cut(s) 1019, 1630
AvaII GGWCC 3 cut(s) 1814, 2656, 2807
AxyI CCTNAGG 2 cut(s) 449, 1536
BaeGI GKGCMC 1 cut(s) 1048
BaeI ACNNNNGTAYC 2 cut(s) 1539, 1572
BanI GGYRCC 1 cut(s) 3604
BbsI GAAGAC 3 cut(s) 446, 1149, 2709
Bbv12I GWGCWC 6 cut(s) 528, 1048, 1666, 2457, 2914, 3643
BccI CCATC 5 cut(s) 20, 612, 1340, 1457, 1838
BceAI ACGGC 2 cut(s) 75, 2115
BcgI CGANNNNNNTGC 4 cut(s) 1621, 1655, 2385, 2419
BciT130I CCWGG 5 cut(s) 54, 1409, 2654, 3002, 3383
BciVI GTATCC 2 cut(s) 97, 3171
BclI TGATCA 4 cut(s) 7, 249, 393, 3807
BcnI CCSGG 2 cut(s) 490, 3191
BcoDI GTCTC 7 cut(s) 319, 400, 629, 884, 1079, 2125, 3352
BcuI ACTAGT 3 cut(s) 1828, 2006, 3635
BfmI CTRYAG 8 cut(s) 357, 907, 1065, 2181, 2187, 2487, 2985, 3468
BfoI RGCGCY 2 cut(s) 2072, 3042
BfrI CTTAAG 1 cut(s) 1622
BfuAI ACCTGC 1 cut(s) 1319
BfuI GTATCC 2 cut(s) 97, 3171
BlpI GCTNAGC 2 cut(s) 1497, 2451
Bme1390I CCNGG 7 cut(s) 54, 490, 1409, 2654, 3002, 3191, 3383
Bme18I GGWCC 3 cut(s) 1814, 2656, 2807
BmeT110I CYCGRG 2 cut(s) 1019, 1630
BmgT120I GGNCC 5 cut(s) 1585, 1814, 2656, 2807, 3014
BmiI GGNNCC 7 cut(s) 1009, 1413, 1586, 1839, 3007, 3387, 3606
BmrFI CCNGG 7 cut(s) 54, 490, 1409, 2654, 3002, 3191, 3383
BmrI ACTGGG 1 cut(s) 2156
BmuI ACTGGG 1 cut(s) 2156
BpiI GAAGAC 3 cut(s) 446, 1149, 2709
BpmI CTGGAG 2 cut(s) 867, 3263
Bpu10I CCTNAGC 1 cut(s) 612
Bpu1102I GCTNAGC 2 cut(s) 1497, 2451
Bpu14I TTCGAA 2 cut(s) 83, 2275
BpuEI CTTGAG 2 cut(s) 1771, 2443
BpuMI CCSGG 2 cut(s) 490, 3191
Bsa29I ATCGAT 1 cut(s) 1344
BsaBI GATNNNNATC 2 cut(s) 30, 3812
BsaHI GRCGYC 1 cut(s) 622
BsaI GGTCTC 1 cut(s) 884
BsaWI WCCGGW 4 cut(s) 131, 398, 668, 1915
BsaXI ACNNNNNCTCC 4 cut(s) 582, 612, 726, 756
Bsc4I CCNNNNNNNGG 7 cut(s) 1328, 1986, 2219, 2292, 2512, 2633, 3302
Bse118I RCCGGY 1 cut(s) 131
Bse1I ACTGG 5 cut(s) 568, 1009, 2162, 2235, 2659
Bse21I CCTNAGG 2 cut(s) 449, 1536
Bse3DI GCAATG 2 cut(s) 3272, 3420
Bse8I GATNNNNATC 2 cut(s) 30, 3812
BseAI TCCGGA 1 cut(s) 1915
BseBI CCWGG 5 cut(s) 54, 1409, 2654, 3002, 3383
BseCI ATCGAT 1 cut(s) 1344
BseGI GGATG 9 cut(s) 31, 130, 513, 623, 705, 1146, 1177, 1468, 2110
BseJI GATNNNNATC 2 cut(s) 30, 3812
BseLI CCNNNNNNNGG 7 cut(s) 1328, 1986, 2219, 2292, 2512, 2633, 3302
BseMI GCAATG 2 cut(s) 3272, 3420
BseMII CTCAG 5 cut(s) 1488, 1550, 1586, 1671, 2442
BseNI ACTGG 5 cut(s) 568, 1009, 2162, 2235, 2659
BseRI GAGGAG 1 cut(s) 1167
BseSI GKGCMC 1 cut(s) 1048
BseYI CCCAGC 2 cut(s) 387, 2369
BsgI GTGCAG 1 cut(s) 3765
Bsh1236I CGCG 2 cut(s) 711, 1794
BshFI GGCC 4 cut(s) 74, 539, 1587, 3015
BshNI GGYRCC 1 cut(s) 3604
BshTI ACCGGT 1 cut(s) 131
BshVI ATCGAT 1 cut(s) 1344
BsiHKAI GWGCWC 6 cut(s) 528, 1048, 1666, 2457, 2914, 3643
BsiHKCI CYCGRG 2 cut(s) 1019, 1630
BsiSI CCGG 9 cut(s) 132, 399, 489, 669, 1103, 1723, 1916, 2565, 3190
BslFI GGGAC 3 cut(s) 1554, 1995, 2980
BslI CCNNNNNNNGG 7 cut(s) 1328, 1986, 2219, 2292, 2512, 2633, 3302
BsmAI GTCTC 7 cut(s) 319, 400, 629, 884, 1079, 2125, 3352
BsmBI CGTCTC 1 cut(s) 629
BsmFI GGGAC 3 cut(s) 1554, 1995, 2980
BsmI GAATGC 1 cut(s) 1771
BsnI GGCC 4 cut(s) 74, 539, 1587, 3015
Bso31I GGTCTC 1 cut(s) 884
BsoBI CYCGRG 2 cut(s) 1019, 1630
Bsp119I TTCGAA 2 cut(s) 83, 2275
Bsp1286I GDGCHC 6 cut(s) 528, 1048, 1666, 2457, 2914, 3643
Bsp13I TCCGGA 1 cut(s) 1915
Bsp1720I GCTNAGC 2 cut(s) 1497, 2451
Bsp19I CCATGG 2 cut(s) 540, 3214
BspANI GGCC 4 cut(s) 74, 539, 1587, 3015
BspCNI CTCAG 5 cut(s) 1489, 1549, 1585, 1672, 2443
BspDI ATCGAT 1 cut(s) 1344
BspEI TCCGGA 1 cut(s) 1915
BspFNI CGCG 2 cut(s) 711, 1794
BspHI TCATGA 1 cut(s) 978
BspLI GGNNCC 7 cut(s) 1009, 1413, 1586, 1839, 3007, 3387, 3606
BspMAI CTGCAG 6 cut(s) 361, 911, 1069, 2191, 2491, 3472
BspMI ACCTGC 1 cut(s) 1319
BspPI GGATC 4 cut(s) 1388, 1999, 2557, 3201
BspQI GCTCTTC 2 cut(s) 161, 2882
BspT104I TTCGAA 2 cut(s) 83, 2275
BspT107I GGYRCC 1 cut(s) 3604
BspTI CTTAAG 1 cut(s) 1622
BspTNI GGTCTC 1 cut(s) 884
BsrBI CCGCTC 1 cut(s) 1272
BsrDI GCAATG 2 cut(s) 3272, 3420
BsrFI RCCGGY 1 cut(s) 131
BsrI ACTGG 5 cut(s) 568, 1009, 2162, 2235, 2659
BssAI RCCGGY 1 cut(s) 131
BssNI GRCGYC 1 cut(s) 622
BssT1I CCWWGG 4 cut(s) 318, 540, 1216, 3214
Bst2UI CCWGG 5 cut(s) 54, 1409, 2654, 3002, 3383
Bst6I CTCTTC 3 cut(s) 161, 1939, 2882
BstACI GRCGYC 1 cut(s) 622
BstAFI CTTAAG 1 cut(s) 1622
BstAPI GCANNNNNTGC 5 cut(s) 365, 1052, 1253, 2474, 3851
BstBI TTCGAA 2 cut(s) 83, 2275
BstDEI CTNAG 9 cut(s) 449, 612, 1497, 1536, 1572, 1680, 2126, 2451, 3867
BstDSI CCRYGG 3 cut(s) 540, 709, 3214
BstENI CCTNNNNNAGG 2 cut(s) 2631, 3300
BstF5I GGATG 9 cut(s) 31, 130, 513, 623, 705, 1146, 1177, 1468, 2110
BstFNI CGCG 2 cut(s) 711, 1794
BstH2I RGCGCY 2 cut(s) 2072, 3042
BstHHI GCGC 4 cut(s) 1757, 2041, 2071, 3041
BstMAI GTCTC 7 cut(s) 319, 400, 629, 884, 1079, 2125, 3352
BstNI CCWGG 5 cut(s) 54, 1409, 2654, 3002, 3383
BstNSI RCATGY 2 cut(s) 2895, 3854
BstSCI CCNGG 7 cut(s) 52, 488, 1407, 2652, 3000, 3189, 3381
BstSFI CTRYAG 8 cut(s) 357, 907, 1065, 2181, 2187, 2487, 2985, 3468
BstSLI GKGCMC 1 cut(s) 1048
BstUI CGCG 2 cut(s) 711, 1794
BstV2I GAAGAC 3 cut(s) 446, 1149, 2709
BstX2I RGATCY 1 cut(s) 3193
BstXI CCANNNNNNTGG 3 cut(s) 26, 301, 3712
BstYI RGATCY 1 cut(s) 3193
Bsu15I ATCGAT 1 cut(s) 1344
Bsu36I CCTNAGG 2 cut(s) 449, 1536
BsuI GTATCC 2 cut(s) 97, 3171
BsuRI GGCC 4 cut(s) 74, 539, 1587, 3015
BsuTUI ATCGAT 1 cut(s) 1344
BtgI CCRYGG 3 cut(s) 540, 709, 3214
BtsCI GGATG 9 cut(s) 31, 130, 513, 623, 705, 1146, 1177, 1468, 2110
BtsI GCAGTG 4 cut(s) 75, 1764, 1891, 3765
BveI ACCTGC 1 cut(s) 1319
CaiI CAGNNNCTG 2 cut(s) 365, 1679
CciI TCATGA 1 cut(s) 978
CfoI GCGC 4 cut(s) 1757, 2041, 2071, 3041
Cfr10I RCCGGY 1 cut(s) 131
Cfr13I GGNCC 5 cut(s) 1585, 1814, 2656, 2807, 3014
Cfr42I CCGCGG 1 cut(s) 712
ClaI ATCGAT 1 cut(s) 1344
CseI GACGC 2 cut(s) 611, 2714
Csp6I GTAC 5 cut(s) 140, 201, 814, 2178, 2788
CspAI ACCGGT 1 cut(s) 131
CviQI GTAC 5 cut(s) 140, 201, 814, 2178, 2788
DdeI CTNAG 9 cut(s) 449, 612, 1497, 1536, 1572, 1680, 2126, 2451, 3867
DraIII CACNNNGTG 1 cut(s) 2036
EaeI YGGCCR 1 cut(s) 72
Eam1104I CTCTTC 3 cut(s) 161, 1939, 2882
EarI CTCTTC 3 cut(s) 161, 1939, 2882
EciI GGCGGA 1 cut(s) 951
Eco130I CCWWGG 4 cut(s) 318, 540, 1216, 3214
Eco31I GGTCTC 1 cut(s) 884
Eco47I GGWCC 3 cut(s) 1814, 2656, 2807
Eco47III AGCGCT 1 cut(s) 3040
Eco57I CTGAAG 1 cut(s) 2787
Eco81I CCTNAGG 2 cut(s) 449, 1536
Eco88I CYCGRG 2 cut(s) 1019, 1630
EcoNI CCTNNNNNAGG 2 cut(s) 2631, 3300
EcoO109I RGGNCCY 1 cut(s) 2807
EcoRI GAATTC 1 cut(s) 1635
EcoRII CCWGG 5 cut(s) 52, 1407, 2652, 3000, 3381
EcoT14I CCWWGG 4 cut(s) 318, 540, 1216, 3214
EcoT22I ATGCAT 2 cut(s) 1040, 2893
ErhI CCWWGG 4 cut(s) 318, 540, 1216, 3214
Esp3I CGTCTC 1 cut(s) 629
FalI AAGNNNNNCTT 4 cut(s) 2109, 2141, 2237, 2269
FaqI GGGAC 3 cut(s) 1554, 1995, 2980
FauI CCCGC 3 cut(s) 704, 716, 3526
FauNDI CATATG 2 cut(s) 21, 3427
FbaI TGATCA 4 cut(s) 7, 249, 393, 3807
FokI GGATG 9 cut(s) 38, 137, 520, 630, 712, 1133, 1184, 1475, 2097
GlaI GCGC 4 cut(s) 1756, 2040, 2070, 3040
GsaI CCCAGC 2 cut(s) 391, 2373
GsuI CTGGAG 2 cut(s) 867, 3263
HaeII RGCGCY 2 cut(s) 2072, 3042
HaeIII GGCC 4 cut(s) 74, 539, 1587, 3015
HapII CCGG 9 cut(s) 132, 399, 489, 669, 1103, 1723, 1916, 2565, 3190
HgaI GACGC 2 cut(s) 611, 2714
HhaI GCGC 4 cut(s) 1757, 2041, 2071, 3041
Hin1I GRCGYC 1 cut(s) 622
Hin6I GCGC 4 cut(s) 1755, 2039, 2069, 3039
HinP1I GCGC 4 cut(s) 1755, 2039, 2069, 3039
HindIII AAGCTT 1 cut(s) 834
HpaII CCGG 9 cut(s) 132, 399, 489, 669, 1103, 1723, 1916, 2565, 3190
HphI GGTGA 9 cut(s) 388, 403, 527, 619, 803, 1343, 2428, 3203, 3775
Hpy166II GTNNAC 5 cut(s) 340, 1046, 1425, 3509, 3563
Hpy8I GTNNAC 5 cut(s) 340, 1046, 1425, 3509, 3563
HpyAV CCTTC 8 cut(s) 498, 1021, 1453, 2260, 2407, 2798, 3431, 3595
HpyCH4IV ACGT 2 cut(s) 1911, 2949
HpyF3I CTNAG 9 cut(s) 449, 612, 1497, 1536, 1572, 1680, 2126, 2451, 3867
HpySE526I ACGT 2 cut(s) 1911, 2949
Hsp92I GRCGYC 1 cut(s) 622
HspAI GCGC 4 cut(s) 1755, 2039, 2069, 3039
Kpn2I TCCGGA 1 cut(s) 1915
Ksp22I TGATCA 4 cut(s) 7, 249, 393, 3807
KspI CCGCGG 1 cut(s) 712
LguI GCTCTTC 2 cut(s) 161, 2882
LmnI GCTCC 8 cut(s) 734, 1013, 1466, 1561, 1847, 2924, 3282, 3385
MaeII ACGT 2 cut(s) 1911, 2949
MaeIII GTNAC 2 cut(s) 481, 805
MbiI CCGCTC 1 cut(s) 1272
MfeI CAATTG 3 cut(s) 2469, 2559, 2748
MflI RGATCY 1 cut(s) 3193
MhlI GDGCHC 6 cut(s) 528, 1048, 1666, 2457, 2914, 3643
MlyI GAGTC 1 cut(s) 3092
MmeI TCCRAC 2 cut(s) 481, 2497
Mph1103I ATGCAT 2 cut(s) 1040, 2893
MroI TCCGGA 1 cut(s) 1915
MroXI GAANNNNTTC 1 cut(s) 2281
MslI CAYNNNNRTG 6 cut(s) 24, 983, 1033, 2460, 3710, 3855
MspA1I CMGCKG 5 cut(s) 365, 711, 740, 1372, 1496
MspCI CTTAAG 1 cut(s) 1622
MspI CCGG 9 cut(s) 132, 399, 489, 669, 1103, 1723, 1916, 2565, 3190
MspR9I CCNGG 7 cut(s) 54, 490, 1409, 2654, 3002, 3191, 3383
MunI CAATTG 3 cut(s) 2469, 2559, 2748
Mva1269I GAATGC 1 cut(s) 1771
MvaI CCWGG 5 cut(s) 54, 1409, 2654, 3002, 3383
MvnI CGCG 2 cut(s) 711, 1794
NciI CCSGG 2 cut(s) 490, 3191
NcoI CCATGG 2 cut(s) 540, 3214
NdeI CATATG 2 cut(s) 21, 3427
NlaIV GGNNCC 7 cut(s) 1009, 1413, 1586, 1839, 3007, 3387, 3606
NsiI ATGCAT 2 cut(s) 1040, 2893
NspI RCATGY 2 cut(s) 2895, 3854
NspV TTCGAA 2 cut(s) 83, 2275
OliI CACNNNNGTG 2 cut(s) 2460, 3710
PagI TCATGA 1 cut(s) 978
PaqCI CACCTGC 1 cut(s) 1319
PciSI GCTCTTC 2 cut(s) 161, 2882
PctI GAATGC 1 cut(s) 1771
PdmI GAANNNNTTC 1 cut(s) 2281
PflMI CCANNNNNTGG 1 cut(s) 2292
PfoI TCCNGGA 1 cut(s) 3189
PinAI ACCGGT 1 cut(s) 131
PleI GAGTC 1 cut(s) 3092
PpsI GAGTC 1 cut(s) 3092
PpuMI RGGWCCY 1 cut(s) 2807
PshBI ATTAAT 2 cut(s) 2196, 2300
PsiI TTATAA 4 cut(s) 1074, 1787, 1865, 2609
Psp1406I AACGTT 1 cut(s) 1911
Psp5II RGGWCCY 1 cut(s) 2807
Psp6I CCWGG 5 cut(s) 52, 1407, 2652, 3000, 3381
PspFI CCCAGC 2 cut(s) 387, 2369
PspGI CCWGG 5 cut(s) 52, 1407, 2652, 3000, 3381
PspN4I GGNNCC 7 cut(s) 1009, 1413, 1586, 1839, 3007, 3387, 3606
PspPI GGNCC 5 cut(s) 1585, 1814, 2656, 2807, 3014
PspPPI RGGWCCY 1 cut(s) 2807
PstI CTGCAG 6 cut(s) 361, 911, 1069, 2191, 2491, 3472
PstNI CAGNNNCTG 2 cut(s) 365, 1679
PsuI RGATCY 1 cut(s) 3193
PvuII CAGCTG 3 cut(s) 365, 740, 1372
RsaI GTAC 5 cut(s) 141, 202, 815, 2179, 2789
RsaNI GTAC 5 cut(s) 140, 201, 814, 2178, 2788
RseI CAYNNNNRTG 6 cut(s) 24, 983, 1033, 2460, 3710, 3855
SacII CCGCGG 1 cut(s) 712
SapI GCTCTTC 2 cut(s) 161, 2882
Sau96I GGNCC 5 cut(s) 1585, 1814, 2656, 2807, 3014
SchI GAGTC 1 cut(s) 3092
ScrFI CCNGG 7 cut(s) 54, 490, 1409, 2654, 3002, 3191, 3383
SduI GDGCHC 6 cut(s) 528, 1048, 1666, 2457, 2914, 3643
SfcI CTRYAG 8 cut(s) 357, 907, 1065, 2181, 2187, 2487, 2985, 3468
Sfr303I CCGCGG 1 cut(s) 712
SfuI TTCGAA 2 cut(s) 83, 2275
SgrBI CCGCGG 1 cut(s) 712
SinI GGWCC 3 cut(s) 1814, 2656, 2807
SmiMI CAYNNNNRTG 6 cut(s) 24, 983, 1033, 2460, 3710, 3855
SmlI CTYRAG 3 cut(s) 1622, 1750, 2458
SmoI CTYRAG 3 cut(s) 1622, 1750, 2458
SpeI ACTAGT 3 cut(s) 1828, 2006, 3635
SspI AATATT 4 cut(s) 1212, 1447, 2208, 2740
StyD4I CCNGG 7 cut(s) 52, 488, 1407, 2652, 3000, 3189, 3381
StyI CCWWGG 4 cut(s) 318, 540, 1216, 3214
TaiI ACGT 2 cut(s) 1914, 2952
TaqI TCGA 7 cut(s) 83, 1344, 2275, 2395, 2442, 3260, 3685
TatI WGTACW 1 cut(s) 813
TauI GCSGC 4 cut(s) 77, 416, 1496, 3047
TspGWI ACGGA 2 cut(s) 237, 2998
Van91I CCANNNNNTGG 1 cut(s) 2292
Vha464I CTTAAG 1 cut(s) 1622
VneI GTGCAC 1 cut(s) 1044
VpaK11BI GGWCC 3 cut(s) 1814, 2656, 2807
VspI ATTAAT 2 cut(s) 2196, 2300
XagI CCTNNNNNAGG 2 cut(s) 2631, 3300
XapI RAATTY 4 cut(s) 1163, 1517, 1635, 3800
XbaI TCTAGA 1 cut(s) 1940
XceI RCATGY 2 cut(s) 2895, 3854
XcmI CCANNNNNNNNNTGG 2 cut(s) 2728, 3008
XmnI GAANNNNTTC 1 cut(s) 2281
Zsp2I ATGCAT 2 cut(s) 1040, 2893
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.